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Genes within 1Mb (chr1:30642168:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -654620 sc-eQTL 2.50e-01 0.0909 0.0788 0.404 B L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 4.28e-01 0.0503 0.0632 0.404 B L1
ENSG00000134644 PUM1 -423823 sc-eQTL 8.55e-01 -0.00974 0.0531 0.404 B L1
ENSG00000162510 MATN1 -81417 sc-eQTL 5.15e-01 0.0364 0.0558 0.404 B L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.02e-02 0.0854 0.0433 0.404 B L1
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 2.17e-01 0.0632 0.0511 0.404 B L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 2.25e-01 0.0736 0.0604 0.404 B L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 7.09e-01 0.0257 0.0687 0.404 CD4T L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.22e-01 -0.00529 0.0537 0.404 CD4T L1
ENSG00000134644 PUM1 -423823 sc-eQTL 7.68e-01 -0.0141 0.0478 0.404 CD4T L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 8.10e-01 0.0127 0.0529 0.404 CD4T L1
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 4.76e-01 0.0338 0.0473 0.404 CD4T L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.16e-01 -0.0132 0.0567 0.404 CD4T L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 2.07e-02 0.208 0.0891 0.404 CD8T L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 7.57e-01 -0.0186 0.06 0.404 CD8T L1
ENSG00000134644 PUM1 -423823 sc-eQTL 7.95e-01 -0.0137 0.0529 0.404 CD8T L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 2.62e-01 0.0576 0.0512 0.404 CD8T L1
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.58e-01 -0.0267 0.0602 0.404 CD8T L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.17e-01 -0.0378 0.0756 0.404 CD8T L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.81e-01 0.0334 0.0812 0.41 DC L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.80e-01 -0.0532 0.0961 0.41 DC L1
ENSG00000134644 PUM1 -423823 sc-eQTL 1.16e-01 -0.118 0.0749 0.41 DC L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.91e-01 -0.000621 0.0538 0.41 DC L1
ENSG00000168528 SERINC2 -767397 sc-eQTL 9.35e-01 -0.00725 0.0887 0.41 DC L1
ENSG00000284543 LINC01226 -864058 sc-eQTL 7.24e-01 0.0207 0.0587 0.41 DC L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.06e-01 0.0706 0.0849 0.41 DC L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 9.04e-01 -0.00764 0.0633 0.404 Mono L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 6.17e-02 0.146 0.0779 0.404 Mono L1
ENSG00000134644 PUM1 -423823 sc-eQTL 8.71e-01 -0.00816 0.0503 0.404 Mono L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 2.90e-01 0.049 0.0462 0.404 Mono L1
ENSG00000162512 SDC3 -266590 sc-eQTL 6.52e-01 0.0402 0.089 0.404 Mono L1
ENSG00000168528 SERINC2 -767397 sc-eQTL 4.19e-01 -0.0772 0.0954 0.404 Mono L1
ENSG00000284543 LINC01226 -864058 sc-eQTL 6.02e-01 -0.0439 0.0841 0.404 Mono L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 9.60e-02 -0.122 0.073 0.404 Mono L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 9.78e-01 0.00243 0.0879 0.406 NK L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 7.05e-01 -0.0228 0.0601 0.406 NK L1
ENSG00000134644 PUM1 -423823 sc-eQTL 6.73e-01 -0.0267 0.0631 0.406 NK L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 3.10e-01 -0.0737 0.0725 0.406 NK L1
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.14e-01 -0.129 0.0811 0.406 NK L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.19e-01 -0.0375 0.0753 0.406 NK L1
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.05e-01 0.0339 0.0653 0.404 Other_T L1
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 6.37e-01 0.033 0.0698 0.404 Other_T L1
ENSG00000134644 PUM1 -423823 sc-eQTL 6.08e-01 0.0322 0.0627 0.404 Other_T L1
ENSG00000162511 LAPTM5 -115606 sc-eQTL 4.84e-03 0.144 0.0505 0.404 Other_T L1
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.90e-01 0.11 0.0839 0.404 Other_T L1
ENSG00000287510 AL137857.1 -89525 sc-eQTL 7.42e-01 -0.029 0.0877 0.404 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -654620 sc-eQTL 5.85e-01 0.056 0.102 0.408 B_Activated L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.02e-01 0.0695 0.103 0.408 B_Activated L2
ENSG00000134644 PUM1 -423823 sc-eQTL 6.18e-01 0.048 0.096 0.408 B_Activated L2
ENSG00000162510 MATN1 -81417 sc-eQTL 9.86e-01 -0.00152 0.084 0.408 B_Activated L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 4.82e-01 0.0412 0.0585 0.408 B_Activated L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 8.64e-01 -0.0162 0.0946 0.408 B_Activated L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.71e-01 -0.0136 0.0837 0.408 B_Activated L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.23e-01 -0.0978 0.0988 0.403 B_Intermediate L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 8.88e-01 0.0117 0.0825 0.403 B_Intermediate L2
ENSG00000134644 PUM1 -423823 sc-eQTL 4.41e-01 0.0599 0.0777 0.403 B_Intermediate L2
ENSG00000162510 MATN1 -81417 sc-eQTL 2.75e-01 0.0884 0.0808 0.403 B_Intermediate L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 2.00e-01 0.0637 0.0495 0.403 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.19e-01 0.108 0.0694 0.403 B_Intermediate L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 7.64e-02 0.138 0.0775 0.403 B_Intermediate L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 1.30e-01 0.145 0.0952 0.407 B_Memory L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 3.03e-01 -0.0907 0.0879 0.407 B_Memory L2
ENSG00000134644 PUM1 -423823 sc-eQTL 8.45e-01 -0.015 0.0767 0.407 B_Memory L2
ENSG00000162510 MATN1 -81417 sc-eQTL 8.12e-01 0.0175 0.0734 0.407 B_Memory L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 4.86e-01 0.0454 0.065 0.407 B_Memory L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.43e-01 0.109 0.0741 0.407 B_Memory L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 1.95e-01 0.113 0.0869 0.407 B_Memory L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 5.57e-01 0.051 0.0867 0.404 B_Naive1 L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 3.03e-01 0.0771 0.0747 0.404 B_Naive1 L2
ENSG00000134644 PUM1 -423823 sc-eQTL 3.95e-01 -0.0562 0.066 0.404 B_Naive1 L2
ENSG00000162510 MATN1 -81417 sc-eQTL 4.77e-01 0.0477 0.067 0.404 B_Naive1 L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.19e-01 0.0697 0.0445 0.404 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.93e-01 0.0765 0.0586 0.404 B_Naive1 L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.07e-01 0.0178 0.0727 0.404 B_Naive1 L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.93e-01 0.0367 0.0928 0.406 B_Naive2 L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 4.32e-01 0.0602 0.0765 0.406 B_Naive2 L2
ENSG00000134644 PUM1 -423823 sc-eQTL 5.77e-01 -0.0419 0.075 0.406 B_Naive2 L2
ENSG00000162510 MATN1 -81417 sc-eQTL 3.05e-01 0.0739 0.0718 0.406 B_Naive2 L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 8.25e-01 0.0109 0.0489 0.406 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 4.72e-01 -0.0513 0.0711 0.406 B_Naive2 L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 5.05e-01 0.0514 0.0769 0.406 B_Naive2 L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.86e-01 -0.0785 0.0904 0.409 CD4_CTL L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.15e-01 -0.00947 0.0891 0.409 CD4_CTL L2
ENSG00000134644 PUM1 -423823 sc-eQTL 2.66e-01 0.0972 0.0871 0.409 CD4_CTL L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.31e-01 0.0488 0.0778 0.409 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 3.32e-01 0.0826 0.085 0.409 CD4_CTL L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 3.41e-01 0.0716 0.075 0.409 CD4_CTL L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 7.92e-02 0.126 0.0712 0.404 CD4_Naive L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 7.15e-01 -0.0233 0.0635 0.404 CD4_Naive L2
ENSG00000134644 PUM1 -423823 sc-eQTL 5.33e-01 -0.0317 0.0507 0.404 CD4_Naive L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.18e-01 0.0352 0.0543 0.404 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.51e-01 0.025 0.0552 0.404 CD4_Naive L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 1.81e-01 -0.0847 0.0631 0.404 CD4_Naive L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 5.07e-02 -0.175 0.0893 0.404 CD4_TCM L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.05e-01 -0.00867 0.0726 0.404 CD4_TCM L2
ENSG00000134644 PUM1 -423823 sc-eQTL 8.82e-01 -0.00952 0.0643 0.404 CD4_TCM L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.53e-01 0.00314 0.0533 0.404 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.61e-01 0.0297 0.0677 0.404 CD4_TCM L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 7.10e-01 -0.0281 0.0754 0.404 CD4_TCM L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 8.60e-01 -0.0159 0.0898 0.404 CD4_TEM L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 1.29e-01 0.13 0.0851 0.404 CD4_TEM L2
ENSG00000134644 PUM1 -423823 sc-eQTL 4.12e-01 0.0585 0.0712 0.404 CD4_TEM L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.31e-01 -0.0452 0.0721 0.404 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.83e-01 0.0345 0.0843 0.404 CD4_TEM L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.62e-02 0.165 0.0824 0.404 CD4_TEM L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 1.81e-01 0.13 0.0971 0.404 CD8_CTL L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.04e-01 -0.00907 0.0748 0.404 CD8_CTL L2
ENSG00000134644 PUM1 -423823 sc-eQTL 3.80e-01 -0.0637 0.0725 0.404 CD8_CTL L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 2.39e-01 0.0946 0.0802 0.404 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 3.63e-02 -0.176 0.0837 0.404 CD8_CTL L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 7.14e-01 -0.0292 0.0795 0.404 CD8_CTL L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 4.20e-03 0.253 0.0874 0.404 CD8_Naive L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 7.85e-01 0.021 0.0768 0.404 CD8_Naive L2
ENSG00000134644 PUM1 -423823 sc-eQTL 8.92e-01 -0.00838 0.0619 0.404 CD8_Naive L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.14e-01 0.00639 0.0593 0.404 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 5.95e-01 -0.0394 0.0739 0.404 CD8_Naive L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.08e-01 -0.0413 0.0805 0.404 CD8_Naive L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.31e-01 -0.0484 0.101 0.405 CD8_TCM L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 8.18e-01 -0.0213 0.0922 0.405 CD8_TCM L2
ENSG00000134644 PUM1 -423823 sc-eQTL 1.15e-01 -0.136 0.0862 0.405 CD8_TCM L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.54e-01 0.0538 0.0907 0.405 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.81e-01 -0.0346 0.084 0.405 CD8_TCM L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.30e-01 -0.041 0.0849 0.405 CD8_TCM L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.05e-01 0.0476 0.0919 0.397 CD8_TEM L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 6.76e-01 -0.0368 0.0881 0.397 CD8_TEM L2
ENSG00000134644 PUM1 -423823 sc-eQTL 7.24e-01 -0.0318 0.0901 0.397 CD8_TEM L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.66e-01 -0.00365 0.0848 0.397 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 9.24e-01 -0.00836 0.088 0.397 CD8_TEM L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 2.31e-02 0.18 0.0786 0.397 CD8_TEM L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 8.50e-01 0.0182 0.096 0.407 MAIT L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 7.57e-01 -0.0264 0.0851 0.407 MAIT L2
ENSG00000134644 PUM1 -423823 sc-eQTL 2.98e-01 0.0848 0.0813 0.407 MAIT L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 2.41e-01 0.0902 0.0767 0.407 MAIT L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.91e-01 0.0341 0.0856 0.407 MAIT L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 5.50e-01 -0.0529 0.0882 0.407 MAIT L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.47e-01 -0.0907 0.0963 0.413 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 1.31e-02 0.201 0.0803 0.413 NK_CD56bright L2
ENSG00000134644 PUM1 -423823 sc-eQTL 9.17e-01 -0.00895 0.0856 0.413 NK_CD56bright L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.15e-01 -0.133 0.0839 0.413 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 8.47e-01 -0.0164 0.0849 0.413 NK_CD56bright L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 5.69e-01 -0.0477 0.0836 0.413 NK_CD56bright L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 5.91e-01 -0.05 0.0928 0.405 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 3.36e-01 -0.066 0.0685 0.405 NK_CD56dim L2
ENSG00000134644 PUM1 -423823 sc-eQTL 6.92e-01 0.0279 0.0704 0.405 NK_CD56dim L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 7.25e-01 -0.0265 0.0751 0.405 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.09e-01 -0.151 0.0936 0.405 NK_CD56dim L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.33e-01 0.0164 0.0776 0.405 NK_CD56dim L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 9.61e-01 0.00476 0.0983 0.402 NK_HLA L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 1.25e-01 -0.134 0.0872 0.402 NK_HLA L2
ENSG00000134644 PUM1 -423823 sc-eQTL 8.52e-01 0.016 0.0855 0.402 NK_HLA L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 8.39e-01 -0.0166 0.0816 0.402 NK_HLA L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.95e-01 0.113 0.0865 0.402 NK_HLA L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 3.15e-01 -0.0843 0.0838 0.402 NK_HLA L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 9.96e-01 -0.000399 0.0896 0.405 NK_cytokine L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 8.52e-01 0.013 0.0699 0.405 NK_cytokine L2
ENSG00000134644 PUM1 -423823 sc-eQTL 5.05e-01 -0.0504 0.0755 0.405 NK_cytokine L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.51e-01 -0.0051 0.0832 0.405 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 9.29e-02 -0.148 0.0876 0.405 NK_cytokine L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.36e-01 -0.0639 0.0819 0.405 NK_cytokine L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 7.65e-01 0.032 0.107 0.415 PB L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 2.85e-01 -0.132 0.123 0.415 PB L2
ENSG00000134644 PUM1 -423823 sc-eQTL 1.26e-01 0.164 0.106 0.415 PB L2
ENSG00000162510 MATN1 -81417 sc-eQTL 7.92e-01 0.0266 0.1 0.415 PB L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.09e-01 0.114 0.0708 0.415 PB L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 9.25e-01 0.00921 0.0981 0.415 PB L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 1.31e-01 0.157 0.103 0.415 PB L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.22e-01 -0.0354 0.0718 0.407 Pro_T L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 4.60e-01 -0.0675 0.0911 0.407 Pro_T L2
ENSG00000134644 PUM1 -423823 sc-eQTL 2.15e-01 -0.105 0.0848 0.407 Pro_T L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.97e-01 0.0787 0.0608 0.407 Pro_T L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.52e-01 0.122 0.0849 0.407 Pro_T L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.80e-01 0.0119 0.0785 0.407 Pro_T L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 4.21e-01 -0.0748 0.0928 0.404 Treg L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 4.40e-01 0.0695 0.0898 0.404 Treg L2
ENSG00000134644 PUM1 -423823 sc-eQTL 1.17e-01 0.113 0.0715 0.404 Treg L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 3.18e-01 0.0823 0.0822 0.404 Treg L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 9.00e-01 -0.0106 0.0839 0.404 Treg L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 2.51e-02 0.187 0.0828 0.404 Treg L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.17e-01 0.0936 0.0934 0.412 cDC L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 3.37e-01 -0.0974 0.101 0.412 cDC L2
ENSG00000134644 PUM1 -423823 sc-eQTL 1.56e-01 -0.123 0.0866 0.412 cDC L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 3.53e-01 0.0567 0.0609 0.412 cDC L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 2.68e-01 0.0867 0.0781 0.412 cDC L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 2.83e-01 -0.0826 0.0767 0.412 cDC L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 1.31e-01 0.125 0.0823 0.412 cDC L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.12e-01 -0.0771 0.0761 0.404 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 8.07e-03 0.224 0.0837 0.404 cMono_IL1B L2
ENSG00000134644 PUM1 -423823 sc-eQTL 6.09e-01 0.0295 0.0576 0.404 cMono_IL1B L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.93e-01 0.0658 0.0504 0.404 cMono_IL1B L2
ENSG00000162512 SDC3 -266590 sc-eQTL 1.31e-01 0.144 0.0948 0.404 cMono_IL1B L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 2.29e-01 -0.116 0.0961 0.404 cMono_IL1B L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 6.72e-01 0.0361 0.0852 0.404 cMono_IL1B L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 1.41e-01 -0.117 0.0791 0.404 cMono_IL1B L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 9.11e-01 -0.00888 0.0792 0.404 cMono_S100A L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.09e-01 0.0618 0.0935 0.404 cMono_S100A L2
ENSG00000134644 PUM1 -423823 sc-eQTL 9.73e-01 -0.00231 0.0676 0.404 cMono_S100A L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 4.94e-01 0.0355 0.0519 0.404 cMono_S100A L2
ENSG00000162512 SDC3 -266590 sc-eQTL 7.49e-01 -0.0287 0.0898 0.404 cMono_S100A L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 7.33e-01 -0.0324 0.095 0.404 cMono_S100A L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 9.52e-01 -0.00461 0.0772 0.404 cMono_S100A L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 3.17e-01 -0.0776 0.0774 0.404 cMono_S100A L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 6.99e-01 0.0467 0.12 0.427 gdT L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 1.08e-01 0.166 0.103 0.427 gdT L2
ENSG00000134644 PUM1 -423823 sc-eQTL 2.41e-01 0.125 0.106 0.427 gdT L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 6.83e-01 0.0474 0.116 0.427 gdT L2
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 6.66e-01 -0.0462 0.107 0.427 gdT L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.54e-01 -0.0465 0.104 0.427 gdT L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.10e-01 0.0911 0.0895 0.402 intMono L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.59e-01 0.0564 0.0964 0.402 intMono L2
ENSG00000134644 PUM1 -423823 sc-eQTL 2.54e-02 -0.182 0.0808 0.402 intMono L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.15e-01 0.0418 0.0641 0.402 intMono L2
ENSG00000162512 SDC3 -266590 sc-eQTL 9.54e-01 0.00509 0.0879 0.402 intMono L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 2.85e-01 0.0985 0.0918 0.402 intMono L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 1.32e-01 -0.131 0.0867 0.402 intMono L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.99e-02 -0.17 0.0864 0.402 intMono L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 2.45e-01 -0.0951 0.0816 0.405 ncMono L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.12e-01 0.00971 0.0873 0.405 ncMono L2
ENSG00000134644 PUM1 -423823 sc-eQTL 7.16e-01 0.026 0.0713 0.405 ncMono L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 9.75e-01 -0.00203 0.0648 0.405 ncMono L2
ENSG00000162512 SDC3 -266590 sc-eQTL 3.07e-01 -0.0742 0.0724 0.405 ncMono L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 8.10e-01 0.0191 0.0793 0.405 ncMono L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 8.35e-01 -0.0165 0.0792 0.405 ncMono L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 2.51e-01 0.0942 0.0818 0.405 ncMono L2
ENSG00000060688 SNRNP40 -654620 sc-eQTL 3.62e-01 -0.083 0.0907 0.404 pDC L2
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.19e-01 0.0644 0.0997 0.404 pDC L2
ENSG00000134644 PUM1 -423823 sc-eQTL 6.69e-01 -0.0355 0.0827 0.404 pDC L2
ENSG00000162511 LAPTM5 -115606 sc-eQTL 7.93e-01 -0.0203 0.0769 0.404 pDC L2
ENSG00000168528 SERINC2 -767397 sc-eQTL 4.42e-01 -0.0717 0.0932 0.404 pDC L2
ENSG00000284543 LINC01226 -864058 sc-eQTL 6.18e-01 -0.0361 0.0724 0.404 pDC L2
ENSG00000287510 AL137857.1 -89525 sc-eQTL 6.56e-01 -0.038 0.0852 0.404 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -654620 sc-eQTL 5.90e-01 0.0503 0.0933 0.404 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 9.03e-01 0.00944 0.0777 0.404 B_Memory LOneK1K
ENSG00000134644 PUM1 -423823 sc-eQTL 3.91e-01 0.0591 0.0687 0.404 B_Memory LOneK1K
ENSG00000162510 MATN1 -81417 sc-eQTL 2.60e-01 0.0884 0.0783 0.404 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -115606 sc-eQTL 4.32e-01 0.0388 0.0493 0.404 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.31e-01 0.0984 0.0649 0.404 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -89525 sc-eQTL 8.28e-02 0.123 0.0706 0.404 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -654620 sc-eQTL 2.73e-01 0.0926 0.0842 0.404 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 1.44e-01 0.0974 0.0664 0.404 B_Naive LOneK1K
ENSG00000134644 PUM1 -423823 sc-eQTL 8.22e-01 -0.0142 0.0631 0.404 B_Naive LOneK1K
ENSG00000162510 MATN1 -81417 sc-eQTL 5.94e-01 0.0324 0.0607 0.404 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.64e-01 0.0594 0.0426 0.404 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 5.87e-01 0.0301 0.0552 0.404 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.72e-01 0.0473 0.0656 0.404 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -654620 sc-eQTL 8.94e-01 -0.00965 0.0722 0.404 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 4.38e-02 0.164 0.0809 0.404 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -423823 sc-eQTL 9.67e-01 0.00214 0.0521 0.404 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -115606 sc-eQTL 1.32e-01 0.069 0.0456 0.404 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -266590 sc-eQTL 3.88e-01 0.0808 0.0933 0.404 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -767397 sc-eQTL 3.80e-01 -0.0844 0.096 0.404 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -864058 sc-eQTL 9.71e-01 0.0029 0.0789 0.404 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.27e-02 -0.149 0.0731 0.404 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -654620 sc-eQTL 8.49e-01 0.0151 0.079 0.403 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 6.73e-01 0.0366 0.0864 0.403 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -423823 sc-eQTL 1.95e-01 -0.0918 0.0706 0.403 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -115606 sc-eQTL 6.46e-01 0.0261 0.0566 0.403 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -266590 sc-eQTL 3.18e-01 0.0826 0.0826 0.403 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -767397 sc-eQTL 3.64e-01 0.0779 0.0857 0.403 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -864058 sc-eQTL 3.38e-01 -0.0781 0.0813 0.403 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -89525 sc-eQTL 3.93e-01 -0.0697 0.0814 0.403 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -654620 sc-eQTL 7.82e-01 0.0245 0.0885 0.405 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -654814 sc-eQTL 5.46e-01 -0.0366 0.0604 0.405 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -423823 sc-eQTL 8.66e-01 -0.0112 0.0662 0.405 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -115606 sc-eQTL 5.64e-01 -0.0427 0.074 0.405 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -76336 sc-eQTL 1.33e-01 -0.128 0.0849 0.405 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -89525 sc-eQTL 4.94e-01 -0.0505 0.0736 0.405 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -864113 2.74e-07 1.3e-07 3.88e-08 1.82e-07 9.01e-08 9.61e-08 1.49e-07 5.37e-08 1.44e-07 4.74e-08 1.57e-07 8.55e-08 1.41e-07 6.56e-08 6.17e-08 7.3e-08 3.98e-08 1.21e-07 5.39e-08 4e-08 1.04e-07 1.27e-07 1.39e-07 3.23e-08 1.4e-07 1.16e-07 1.08e-07 9.65e-08 1.09e-07 1.07e-07 9.7e-08 3.87e-08 3.35e-08 8.44e-08 8.21e-08 3.62e-08 5.05e-08 9.62e-08 6.54e-08 3.8e-08 4.69e-08 1.36e-07 4.14e-08 3.33e-08 5.19e-08 1.83e-08 1.19e-07 3.86e-09 4.79e-08