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Genes within 1Mb (chr1:30628287:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -668501 sc-eQTL 6.69e-01 -0.0442 0.103 0.825 B L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.75e-01 0.112 0.0823 0.825 B L1
ENSG00000134644 PUM1 -437704 sc-eQTL 7.40e-01 -0.0231 0.0694 0.825 B L1
ENSG00000162510 MATN1 -95298 sc-eQTL 7.87e-02 0.128 0.0724 0.825 B L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 3.39e-03 0.166 0.056 0.825 B L1
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 4.08e-01 0.0555 0.0668 0.825 B L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 2.97e-01 0.0827 0.079 0.825 B L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 2.36e-01 -0.105 0.0882 0.825 CD4T L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 7.62e-01 0.0209 0.0691 0.825 CD4T L1
ENSG00000134644 PUM1 -437704 sc-eQTL 5.67e-01 0.0352 0.0615 0.825 CD4T L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.37e-01 -0.0807 0.068 0.825 CD4T L1
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 9.92e-01 -0.000584 0.061 0.825 CD4T L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.28e-01 0.0159 0.073 0.825 CD4T L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.53e-01 0.0876 0.117 0.825 CD8T L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 5.98e-01 0.041 0.0777 0.825 CD8T L1
ENSG00000134644 PUM1 -437704 sc-eQTL 6.01e-01 0.0358 0.0684 0.825 CD8T L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.44e-01 0.0971 0.0661 0.825 CD8T L1
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.04e-01 0.0521 0.0778 0.825 CD8T L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.35e-01 -0.0203 0.0978 0.825 CD8T L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 5.86e-01 0.0576 0.106 0.827 DC L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 3.17e-01 -0.125 0.125 0.827 DC L1
ENSG00000134644 PUM1 -437704 sc-eQTL 3.17e-02 -0.21 0.0969 0.827 DC L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.42e-01 -0.0818 0.0697 0.827 DC L1
ENSG00000168528 SERINC2 -781278 sc-eQTL 6.50e-01 -0.0523 0.115 0.827 DC L1
ENSG00000284543 LINC01226 -877939 sc-eQTL 2.47e-01 -0.0885 0.0762 0.827 DC L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.58e-01 -0.00588 0.111 0.827 DC L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.49e-01 -0.0619 0.0816 0.825 Mono L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 6.43e-01 0.0469 0.101 0.825 Mono L1
ENSG00000134644 PUM1 -437704 sc-eQTL 1.92e-03 -0.199 0.0634 0.825 Mono L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 5.26e-01 0.0379 0.0596 0.825 Mono L1
ENSG00000162512 SDC3 -280471 sc-eQTL 8.22e-01 0.0258 0.115 0.825 Mono L1
ENSG00000168528 SERINC2 -781278 sc-eQTL 8.04e-02 -0.215 0.122 0.825 Mono L1
ENSG00000284543 LINC01226 -877939 sc-eQTL 1.93e-01 -0.141 0.108 0.825 Mono L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 6.53e-01 0.0427 0.0947 0.825 Mono L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.85e-01 -0.0792 0.113 0.826 NK L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.29e-01 0.00688 0.0775 0.826 NK L1
ENSG00000134644 PUM1 -437704 sc-eQTL 9.75e-01 0.00256 0.0813 0.826 NK L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.75e-01 0.102 0.0933 0.826 NK L1
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 2.13e-01 -0.131 0.105 0.826 NK L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 7.72e-01 0.0281 0.0971 0.826 NK L1
ENSG00000060688 SNRNP40 -668501 sc-eQTL 7.25e-02 0.151 0.0836 0.825 Other_T L1
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 8.27e-01 0.0197 0.09 0.825 Other_T L1
ENSG00000134644 PUM1 -437704 sc-eQTL 9.55e-02 0.135 0.0804 0.825 Other_T L1
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.63e-01 0.0743 0.0661 0.825 Other_T L1
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 6.77e-02 0.198 0.108 0.825 Other_T L1
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.56e-01 0.00626 0.113 0.825 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -668501 sc-eQTL 8.09e-01 -0.0329 0.136 0.827 B_Activated L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.35e-01 -0.0112 0.137 0.827 B_Activated L2
ENSG00000134644 PUM1 -437704 sc-eQTL 7.13e-01 0.0471 0.128 0.827 B_Activated L2
ENSG00000162510 MATN1 -95298 sc-eQTL 4.38e-01 -0.0866 0.111 0.827 B_Activated L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.47e-01 0.09 0.0775 0.827 B_Activated L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 1.47e-02 -0.304 0.123 0.827 B_Activated L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.53e-01 0.0659 0.111 0.827 B_Activated L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 5.72e-01 -0.0724 0.128 0.824 B_Intermediate L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.07e-01 0.172 0.106 0.824 B_Intermediate L2
ENSG00000134644 PUM1 -437704 sc-eQTL 3.84e-01 -0.0876 0.1 0.824 B_Intermediate L2
ENSG00000162510 MATN1 -95298 sc-eQTL 9.49e-01 -0.00674 0.105 0.824 B_Intermediate L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 4.17e-01 0.0522 0.0642 0.824 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 6.21e-02 0.168 0.0895 0.824 B_Intermediate L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 4.22e-01 0.0811 0.101 0.824 B_Intermediate L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 6.30e-01 0.0588 0.122 0.825 B_Memory L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 8.86e-01 -0.0161 0.112 0.825 B_Memory L2
ENSG00000134644 PUM1 -437704 sc-eQTL 7.31e-01 -0.0337 0.0977 0.825 B_Memory L2
ENSG00000162510 MATN1 -95298 sc-eQTL 9.23e-01 0.00902 0.0935 0.825 B_Memory L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.61e-01 0.0931 0.0826 0.825 B_Memory L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.82e-01 -0.0522 0.0948 0.825 B_Memory L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 3.88e-01 0.0958 0.111 0.825 B_Memory L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.20e-01 -0.0908 0.112 0.825 B_Naive1 L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 2.82e-01 0.104 0.0968 0.825 B_Naive1 L2
ENSG00000134644 PUM1 -437704 sc-eQTL 7.88e-01 0.0231 0.0856 0.825 B_Naive1 L2
ENSG00000162510 MATN1 -95298 sc-eQTL 8.74e-02 0.148 0.0863 0.825 B_Naive1 L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 3.36e-01 0.0558 0.0579 0.825 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 6.42e-01 0.0354 0.0762 0.825 B_Naive1 L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 7.36e-01 0.0318 0.0942 0.825 B_Naive1 L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 3.88e-01 -0.104 0.12 0.826 B_Naive2 L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.63e-01 0.138 0.0987 0.826 B_Naive2 L2
ENSG00000134644 PUM1 -437704 sc-eQTL 6.43e-01 -0.0451 0.097 0.826 B_Naive2 L2
ENSG00000162510 MATN1 -95298 sc-eQTL 2.76e-01 0.101 0.0929 0.826 B_Naive2 L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.27e-01 0.0965 0.0629 0.826 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 8.43e-01 0.0183 0.0921 0.826 B_Naive2 L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 7.34e-01 0.0339 0.0995 0.826 B_Naive2 L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 1.34e-01 -0.177 0.118 0.825 CD4_CTL L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 6.96e-01 -0.0456 0.117 0.825 CD4_CTL L2
ENSG00000134644 PUM1 -437704 sc-eQTL 2.18e-01 0.141 0.114 0.825 CD4_CTL L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 9.75e-01 -0.00324 0.102 0.825 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 7.92e-02 0.195 0.111 0.825 CD4_CTL L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 4.54e-01 0.0737 0.0983 0.825 CD4_CTL L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 9.94e-01 0.000695 0.0928 0.825 CD4_Naive L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 5.67e-01 -0.0471 0.0822 0.825 CD4_Naive L2
ENSG00000134644 PUM1 -437704 sc-eQTL 9.20e-01 -0.00659 0.0657 0.825 CD4_Naive L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 5.77e-01 -0.0393 0.0703 0.825 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 7.41e-01 0.0236 0.0714 0.825 CD4_Naive L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 4.77e-01 -0.0584 0.0819 0.825 CD4_Naive L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.20e-01 -0.0937 0.116 0.825 CD4_TCM L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 6.64e-02 0.171 0.0928 0.825 CD4_TCM L2
ENSG00000134644 PUM1 -437704 sc-eQTL 2.35e-01 0.0984 0.0826 0.825 CD4_TCM L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.17e-01 -0.107 0.0683 0.825 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 4.32e-01 -0.0685 0.0871 0.825 CD4_TCM L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.45e-01 0.0588 0.097 0.825 CD4_TCM L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 9.56e-01 0.00642 0.118 0.825 CD4_TEM L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.42e-01 0.0862 0.112 0.825 CD4_TEM L2
ENSG00000134644 PUM1 -437704 sc-eQTL 1.46e-01 -0.136 0.0929 0.825 CD4_TEM L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 5.22e-01 0.0605 0.0943 0.825 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 1.91e-01 0.144 0.11 0.825 CD4_TEM L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.11e-01 -0.0122 0.109 0.825 CD4_TEM L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 6.60e-01 0.0561 0.127 0.825 CD8_CTL L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.66e-01 -0.0042 0.0977 0.825 CD8_CTL L2
ENSG00000134644 PUM1 -437704 sc-eQTL 8.27e-01 0.0208 0.0948 0.825 CD8_CTL L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.15e-01 0.13 0.105 0.825 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 2.92e-01 -0.116 0.11 0.825 CD8_CTL L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 2.69e-01 0.115 0.104 0.825 CD8_CTL L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.36e-01 0.0904 0.116 0.825 CD8_Naive L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 2.81e-01 0.108 0.0998 0.825 CD8_Naive L2
ENSG00000134644 PUM1 -437704 sc-eQTL 8.88e-01 0.0114 0.0805 0.825 CD8_Naive L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 7.50e-01 -0.0246 0.0771 0.825 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 6.11e-01 0.049 0.0962 0.825 CD8_Naive L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 1.78e-01 -0.141 0.104 0.825 CD8_Naive L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 7.70e-01 -0.0384 0.131 0.826 CD8_TCM L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 6.61e-01 0.0528 0.12 0.826 CD8_TCM L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.40e-02 0.217 0.112 0.826 CD8_TCM L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 4.61e-01 0.0873 0.118 0.826 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 2.97e-01 0.114 0.109 0.826 CD8_TCM L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 6.95e-01 -0.0434 0.111 0.826 CD8_TCM L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 3.63e-01 -0.11 0.121 0.82 CD8_TEM L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.95e-01 -0.000759 0.116 0.82 CD8_TEM L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.72e-01 0.0672 0.119 0.82 CD8_TEM L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 7.12e-01 0.0413 0.112 0.82 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.57e-01 0.0682 0.116 0.82 CD8_TEM L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 1.56e-01 0.149 0.104 0.82 CD8_TEM L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.84e-02 0.243 0.122 0.823 MAIT L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.73e-01 -0.0785 0.109 0.823 MAIT L2
ENSG00000134644 PUM1 -437704 sc-eQTL 1.90e-02 0.245 0.103 0.823 MAIT L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 7.17e-01 -0.0358 0.0989 0.823 MAIT L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 3.41e-01 0.105 0.11 0.823 MAIT L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.54e-01 -0.00649 0.114 0.823 MAIT L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 6.09e-01 -0.0653 0.128 0.824 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 3.90e-01 0.0928 0.108 0.824 NK_CD56bright L2
ENSG00000134644 PUM1 -437704 sc-eQTL 4.50e-01 -0.0857 0.113 0.824 NK_CD56bright L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.54e-01 -0.159 0.111 0.824 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 1.77e-01 -0.152 0.112 0.824 NK_CD56bright L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 2.16e-01 -0.137 0.11 0.824 NK_CD56bright L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 7.00e-01 -0.046 0.119 0.825 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 3.16e-01 0.0887 0.0881 0.825 NK_CD56dim L2
ENSG00000134644 PUM1 -437704 sc-eQTL 3.58e-01 0.0834 0.0905 0.825 NK_CD56dim L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.27e-01 0.147 0.0961 0.825 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 3.52e-01 -0.113 0.121 0.825 NK_CD56dim L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.71e-01 -0.0163 0.0999 0.825 NK_CD56dim L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 8.33e-02 0.222 0.128 0.829 NK_HLA L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 7.40e-03 -0.305 0.113 0.829 NK_HLA L2
ENSG00000134644 PUM1 -437704 sc-eQTL 8.61e-01 0.0196 0.112 0.829 NK_HLA L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 6.44e-01 0.0493 0.107 0.829 NK_HLA L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.88e-01 0.0615 0.113 0.829 NK_HLA L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.44e-01 0.0216 0.11 0.829 NK_HLA L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.10e-01 -0.0982 0.119 0.825 NK_cytokine L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 3.78e-01 -0.0819 0.0928 0.825 NK_cytokine L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.22e-01 -0.0644 0.1 0.825 NK_cytokine L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 6.22e-01 0.0546 0.111 0.825 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 7.81e-01 -0.0326 0.117 0.825 NK_cytokine L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.35e-01 0.0089 0.109 0.825 NK_cytokine L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.01e-01 0.122 0.145 0.826 PB L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 7.75e-01 -0.0484 0.169 0.826 PB L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.35e-01 0.0911 0.146 0.826 PB L2
ENSG00000162510 MATN1 -95298 sc-eQTL 9.61e-01 -0.00676 0.137 0.826 PB L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 8.18e-01 -0.0226 0.0977 0.826 PB L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 6.31e-01 0.0643 0.134 0.826 PB L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 4.70e-02 0.281 0.14 0.826 PB L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 3.86e-01 0.079 0.0909 0.826 Pro_T L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.10e-01 -0.0954 0.115 0.826 Pro_T L2
ENSG00000134644 PUM1 -437704 sc-eQTL 6.48e-01 0.0492 0.108 0.826 Pro_T L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 4.72e-01 0.0557 0.0773 0.826 Pro_T L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.81e-01 0.0598 0.108 0.826 Pro_T L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 9.99e-01 -0.000119 0.0994 0.826 Pro_T L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 9.24e-01 -0.0114 0.12 0.825 Treg L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.87e-01 -0.00187 0.116 0.825 Treg L2
ENSG00000134644 PUM1 -437704 sc-eQTL 4.15e-01 0.0756 0.0925 0.825 Treg L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 8.81e-01 -0.0159 0.106 0.825 Treg L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 7.20e-01 -0.0388 0.108 0.825 Treg L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.43e-02 0.207 0.107 0.825 Treg L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 2.72e-01 0.135 0.122 0.822 cDC L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.27e-01 -0.203 0.132 0.822 cDC L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.56e-01 -0.0673 0.114 0.822 cDC L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 7.76e-01 -0.0228 0.0801 0.822 cDC L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 2.03e-01 -0.131 0.102 0.822 cDC L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 1.70e-01 -0.138 0.1 0.822 cDC L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 3.45e-01 -0.103 0.108 0.822 cDC L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 1.84e-01 -0.132 0.099 0.825 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 8.46e-01 0.0216 0.111 0.825 cMono_IL1B L2
ENSG00000134644 PUM1 -437704 sc-eQTL 8.74e-02 -0.128 0.0745 0.825 cMono_IL1B L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.36e-01 0.078 0.0656 0.825 cMono_IL1B L2
ENSG00000162512 SDC3 -280471 sc-eQTL 2.65e-01 0.138 0.124 0.825 cMono_IL1B L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 3.93e-02 -0.258 0.124 0.825 cMono_IL1B L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 8.16e-01 0.0259 0.111 0.825 cMono_IL1B L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 4.00e-01 0.0872 0.103 0.825 cMono_IL1B L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 1.89e-01 0.137 0.104 0.825 cMono_S100A L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.72e-01 0.169 0.123 0.825 cMono_S100A L2
ENSG00000134644 PUM1 -437704 sc-eQTL 1.30e-01 -0.135 0.089 0.825 cMono_S100A L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.78e-01 0.0924 0.0685 0.825 cMono_S100A L2
ENSG00000162512 SDC3 -280471 sc-eQTL 3.02e-01 -0.123 0.118 0.825 cMono_S100A L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 1.83e-01 -0.167 0.125 0.825 cMono_S100A L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 3.01e-01 -0.106 0.102 0.825 cMono_S100A L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.38e-01 -0.0632 0.102 0.825 cMono_S100A L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.51e-02 -0.322 0.159 0.836 gdT L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 1.53e-01 0.198 0.138 0.836 gdT L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.05e-01 -0.0954 0.143 0.836 gdT L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 8.17e-01 -0.0361 0.155 0.836 gdT L2
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 3.27e-01 -0.14 0.143 0.836 gdT L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.39e-01 0.0283 0.139 0.836 gdT L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 1.47e-01 -0.17 0.116 0.833 intMono L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.57e-01 0.0938 0.126 0.833 intMono L2
ENSG00000134644 PUM1 -437704 sc-eQTL 8.47e-02 -0.184 0.106 0.833 intMono L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 3.08e-01 0.0853 0.0835 0.833 intMono L2
ENSG00000162512 SDC3 -280471 sc-eQTL 9.72e-01 0.00402 0.115 0.833 intMono L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 5.51e-01 0.0716 0.12 0.833 intMono L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 6.25e-01 -0.0556 0.114 0.833 intMono L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 8.96e-01 0.0149 0.114 0.833 intMono L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 9.00e-02 -0.182 0.107 0.826 ncMono L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.04e-01 0.0957 0.114 0.826 ncMono L2
ENSG00000134644 PUM1 -437704 sc-eQTL 5.59e-01 -0.0548 0.0936 0.826 ncMono L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 3.21e-01 -0.0845 0.0849 0.826 ncMono L2
ENSG00000162512 SDC3 -280471 sc-eQTL 6.43e-01 0.0442 0.0953 0.826 ncMono L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 7.44e-01 -0.0341 0.104 0.826 ncMono L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 4.53e-01 -0.0781 0.104 0.826 ncMono L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 1.14e-01 0.17 0.107 0.826 ncMono L2
ENSG00000060688 SNRNP40 -668501 sc-eQTL 5.26e-01 -0.0779 0.123 0.819 pDC L2
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 5.27e-01 -0.0853 0.134 0.819 pDC L2
ENSG00000134644 PUM1 -437704 sc-eQTL 4.80e-04 -0.383 0.107 0.819 pDC L2
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.80e-01 -0.112 0.103 0.819 pDC L2
ENSG00000168528 SERINC2 -781278 sc-eQTL 2.83e-01 -0.135 0.125 0.819 pDC L2
ENSG00000284543 LINC01226 -877939 sc-eQTL 3.60e-01 -0.0896 0.0975 0.819 pDC L2
ENSG00000287510 AL137857.1 -103406 sc-eQTL 1.87e-01 0.152 0.114 0.819 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -668501 sc-eQTL 4.88e-01 -0.0845 0.122 0.825 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 3.22e-01 0.1 0.101 0.825 B_Memory LOneK1K
ENSG00000134644 PUM1 -437704 sc-eQTL 3.02e-01 -0.0928 0.0897 0.825 B_Memory LOneK1K
ENSG00000162510 MATN1 -95298 sc-eQTL 8.66e-01 0.0174 0.103 0.825 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.59e-01 0.0728 0.0642 0.825 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 3.60e-01 0.078 0.085 0.825 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -103406 sc-eQTL 3.21e-01 0.0921 0.0927 0.825 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -668501 sc-eQTL 6.21e-01 -0.0544 0.11 0.825 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 9.42e-02 0.145 0.0862 0.825 B_Naive LOneK1K
ENSG00000134644 PUM1 -437704 sc-eQTL 8.58e-01 -0.0147 0.0821 0.825 B_Naive LOneK1K
ENSG00000162510 MATN1 -95298 sc-eQTL 5.17e-02 0.153 0.0784 0.825 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.65e-01 0.062 0.0555 0.825 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.19e-01 0.0464 0.0718 0.825 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.91e-01 0.046 0.0853 0.825 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -668501 sc-eQTL 9.24e-01 0.00897 0.0943 0.825 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 4.45e-01 0.0817 0.107 0.825 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -437704 sc-eQTL 1.45e-02 -0.166 0.0672 0.825 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -129487 sc-eQTL 2.01e-01 0.0765 0.0597 0.825 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -280471 sc-eQTL 8.67e-01 0.0205 0.122 0.825 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -781278 sc-eQTL 7.66e-02 -0.222 0.125 0.825 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -877939 sc-eQTL 7.81e-01 -0.0286 0.103 0.825 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -103406 sc-eQTL 6.96e-01 0.0378 0.0965 0.825 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -668501 sc-eQTL 3.61e-02 -0.216 0.102 0.825 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 6.27e-01 0.0551 0.113 0.825 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -437704 sc-eQTL 1.52e-01 -0.133 0.0923 0.825 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -129487 sc-eQTL 8.07e-01 -0.0181 0.0741 0.825 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -280471 sc-eQTL 4.21e-01 0.0872 0.108 0.825 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -781278 sc-eQTL 9.30e-01 0.00992 0.112 0.825 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -877939 sc-eQTL 2.93e-01 -0.112 0.106 0.825 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -103406 sc-eQTL 6.44e-01 0.0494 0.107 0.825 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -668501 sc-eQTL 7.47e-01 -0.0369 0.114 0.825 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -668695 sc-eQTL 8.78e-01 -0.012 0.0779 0.825 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -437704 sc-eQTL 8.58e-01 0.0153 0.0854 0.825 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -129487 sc-eQTL 1.71e-01 0.13 0.095 0.825 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -90217 sc-eQTL 5.34e-01 -0.0684 0.11 0.825 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -103406 sc-eQTL 5.97e-01 0.0503 0.0949 0.825 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142910 TINAGL1 -948198 pQTL 0.0308 -0.04 0.0185 0.00112 0.0 0.208

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134644 \N -437704 8.35e-07 6.26e-07 1.59e-07 4.36e-07 1.09e-07 3.36e-07 6.06e-07 1.42e-07 4.43e-07 2.57e-07 7.15e-07 4.43e-07 8.6e-07 1.58e-07 2.96e-07 2.83e-07 4.29e-07 3.95e-07 2.79e-07 2.78e-07 2.52e-07 4.14e-07 3.77e-07 2.39e-07 9.15e-07 2.6e-07 3.93e-07 3.13e-07 4.13e-07 6.35e-07 2.93e-07 3.75e-08 9.89e-08 1.93e-07 3.57e-07 2.13e-07 3.26e-07 1.39e-07 1.01e-07 1.57e-08 2.38e-07 5.44e-07 7.3e-08 2.67e-08 1.25e-07 3.92e-08 1.13e-07 8.88e-08 6.14e-08
ENSG00000162510 \N -95298 6.57e-06 9.12e-06 1.31e-06 4.31e-06 1.92e-06 3.86e-06 9.75e-06 1.25e-06 5.48e-06 4.19e-06 9.18e-06 4.64e-06 1.14e-05 3.87e-06 1.87e-06 5.31e-06 3.84e-06 3.85e-06 2.29e-06 2.56e-06 3.57e-06 7.64e-06 5.82e-06 2.42e-06 1.14e-05 2.68e-06 4.22e-06 3.11e-06 7.67e-06 7.77e-06 3.95e-06 8.14e-07 1.05e-06 2.85e-06 3.5e-06 2.09e-06 1.65e-06 1.84e-06 1.6e-06 1.03e-06 1.03e-06 8.25e-06 1.28e-06 1.38e-07 8.27e-07 1.29e-06 9.95e-07 7.19e-07 5.63e-07