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Genes within 1Mb (chr1:30627082:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -669706 sc-eQTL 3.91e-01 0.0739 0.0861 0.293 B L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.83e-01 -0.0102 0.069 0.293 B L1
ENSG00000134644 PUM1 -438909 sc-eQTL 7.09e-01 -0.0216 0.0579 0.293 B L1
ENSG00000162510 MATN1 -96503 sc-eQTL 1.46e-01 0.0884 0.0606 0.293 B L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 2.59e-01 0.0538 0.0475 0.293 B L1
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 2.78e-01 0.0606 0.0557 0.293 B L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 1.59e-01 0.093 0.0658 0.293 B L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.15e-01 -0.0481 0.0737 0.293 CD4T L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.31e-01 -0.0123 0.0576 0.293 CD4T L1
ENSG00000134644 PUM1 -438909 sc-eQTL 6.82e-01 0.0211 0.0513 0.293 CD4T L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.37e-01 0.0843 0.0565 0.293 CD4T L1
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 9.40e-01 -0.00384 0.0508 0.293 CD4T L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.82e-01 -0.025 0.0609 0.293 CD4T L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 3.76e-01 0.085 0.0958 0.293 CD8T L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 3.88e-01 0.0552 0.0637 0.293 CD8T L1
ENSG00000134644 PUM1 -438909 sc-eQTL 4.12e-01 0.0462 0.0561 0.293 CD8T L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 6.22e-02 0.102 0.0542 0.293 CD8T L1
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 9.29e-01 -0.00574 0.064 0.293 CD8T L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 3.95e-01 -0.0685 0.0803 0.293 CD8T L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 8.21e-01 0.0198 0.0871 0.297 DC L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.19e-01 -0.0236 0.103 0.297 DC L1
ENSG00000134644 PUM1 -438909 sc-eQTL 1.70e-01 -0.111 0.0804 0.297 DC L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.81e-01 0.0506 0.0576 0.297 DC L1
ENSG00000168528 SERINC2 -782483 sc-eQTL 3.63e-01 0.0866 0.0949 0.297 DC L1
ENSG00000284543 LINC01226 -879144 sc-eQTL 6.42e-01 0.0294 0.063 0.297 DC L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 8.81e-02 0.155 0.0906 0.297 DC L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 9.80e-01 0.00165 0.0669 0.293 Mono L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 4.11e-01 0.0683 0.0828 0.293 Mono L1
ENSG00000134644 PUM1 -438909 sc-eQTL 3.64e-01 0.0483 0.0531 0.293 Mono L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 6.89e-02 0.0888 0.0485 0.293 Mono L1
ENSG00000162512 SDC3 -281676 sc-eQTL 6.23e-01 -0.0462 0.094 0.293 Mono L1
ENSG00000168528 SERINC2 -782483 sc-eQTL 6.46e-01 -0.0464 0.101 0.293 Mono L1
ENSG00000284543 LINC01226 -879144 sc-eQTL 5.21e-01 -0.057 0.0888 0.293 Mono L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 1.66e-01 -0.107 0.0773 0.293 Mono L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 6.48e-01 -0.0428 0.0935 0.294 NK L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 9.88e-01 0.000986 0.064 0.294 NK L1
ENSG00000134644 PUM1 -438909 sc-eQTL 7.60e-01 0.0206 0.0672 0.294 NK L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 2.16e-01 -0.0955 0.077 0.294 NK L1
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.64e-01 -0.0788 0.0867 0.294 NK L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.23e-01 -0.0395 0.0802 0.294 NK L1
ENSG00000060688 SNRNP40 -669706 sc-eQTL 6.03e-01 -0.0362 0.0695 0.293 Other_T L1
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.90e-01 -0.0297 0.0743 0.293 Other_T L1
ENSG00000134644 PUM1 -438909 sc-eQTL 7.12e-01 0.0247 0.0668 0.293 Other_T L1
ENSG00000162511 LAPTM5 -130692 sc-eQTL 9.25e-03 0.142 0.0539 0.293 Other_T L1
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.02e-01 0.0926 0.0895 0.293 Other_T L1
ENSG00000287510 AL137857.1 -104611 sc-eQTL 4.68e-01 -0.0679 0.0933 0.293 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -669706 sc-eQTL 3.07e-01 0.115 0.112 0.291 B_Activated L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.01e-01 0.0593 0.113 0.291 B_Activated L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.59e-01 0.00536 0.105 0.291 B_Activated L2
ENSG00000162510 MATN1 -96503 sc-eQTL 4.72e-01 0.0663 0.0919 0.291 B_Activated L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 8.78e-01 0.0099 0.0642 0.291 B_Activated L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 5.06e-01 -0.069 0.104 0.291 B_Activated L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 5.05e-01 -0.0613 0.0916 0.291 B_Activated L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 4.50e-01 -0.0809 0.107 0.294 B_Intermediate L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 7.65e-01 0.0267 0.0891 0.294 B_Intermediate L2
ENSG00000134644 PUM1 -438909 sc-eQTL 3.85e-01 0.0731 0.0839 0.294 B_Intermediate L2
ENSG00000162510 MATN1 -96503 sc-eQTL 4.55e-01 0.0654 0.0874 0.294 B_Intermediate L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.68e-01 0.074 0.0535 0.294 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 2.18e-01 0.0927 0.0751 0.294 B_Intermediate L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 8.21e-03 0.221 0.083 0.294 B_Intermediate L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 8.77e-01 0.0159 0.103 0.295 B_Memory L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 1.09e-01 -0.152 0.0943 0.295 B_Memory L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.89e-01 0.00114 0.0826 0.295 B_Memory L2
ENSG00000162510 MATN1 -96503 sc-eQTL 1.17e-01 0.124 0.0785 0.295 B_Memory L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 5.85e-01 0.0383 0.07 0.295 B_Memory L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 1.81e-01 0.107 0.0798 0.295 B_Memory L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 4.73e-01 0.0673 0.0937 0.295 B_Memory L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 2.77e-01 0.102 0.0935 0.293 B_Naive1 L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.31e-01 -0.0173 0.0809 0.293 B_Naive1 L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.36e-02 -0.119 0.0709 0.293 B_Naive1 L2
ENSG00000162510 MATN1 -96503 sc-eQTL 1.56e-01 0.103 0.0721 0.293 B_Naive1 L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 2.62e-01 0.0543 0.0482 0.293 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.08e-01 0.0648 0.0634 0.293 B_Naive1 L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 7.38e-01 0.0262 0.0785 0.293 B_Naive1 L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 7.88e-01 -0.027 0.101 0.294 B_Naive2 L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.27e-01 0.0404 0.0829 0.294 B_Naive2 L2
ENSG00000134644 PUM1 -438909 sc-eQTL 4.44e-01 0.0623 0.0811 0.294 B_Naive2 L2
ENSG00000162510 MATN1 -96503 sc-eQTL 7.01e-01 0.03 0.0779 0.294 B_Naive2 L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.73e-01 0.038 0.0529 0.294 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 7.18e-01 -0.0279 0.0771 0.294 B_Naive2 L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 7.90e-01 0.0223 0.0833 0.294 B_Naive2 L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.14e-01 -0.0652 0.0996 0.293 CD4_CTL L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 7.48e-01 -0.0316 0.0981 0.293 CD4_CTL L2
ENSG00000134644 PUM1 -438909 sc-eQTL 6.89e-02 0.174 0.0954 0.293 CD4_CTL L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.51e-01 -0.0646 0.0856 0.293 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 8.89e-01 0.0131 0.0938 0.293 CD4_CTL L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 3.15e-01 0.0832 0.0826 0.293 CD4_CTL L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 3.69e-01 0.069 0.0767 0.293 CD4_Naive L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.43e-01 -0.0316 0.0681 0.293 CD4_Naive L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.48e-01 0.00357 0.0544 0.293 CD4_Naive L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.83e-02 0.115 0.0577 0.293 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 7.15e-01 -0.0216 0.0591 0.293 CD4_Naive L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 2.67e-01 -0.0754 0.0677 0.293 CD4_Naive L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 1.17e-02 -0.242 0.0951 0.293 CD4_TCM L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.14e-01 -0.0183 0.0778 0.293 CD4_TCM L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.74e-01 0.00223 0.0689 0.293 CD4_TCM L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 2.39e-01 0.0673 0.057 0.293 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.65e-01 0.0657 0.0724 0.293 CD4_TCM L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 9.08e-01 0.00939 0.0808 0.293 CD4_TCM L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.98e-01 -0.0512 0.097 0.293 CD4_TEM L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 1.57e-01 0.131 0.0921 0.293 CD4_TEM L2
ENSG00000134644 PUM1 -438909 sc-eQTL 7.31e-01 -0.0265 0.077 0.293 CD4_TEM L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 5.88e-01 -0.0423 0.0779 0.293 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 8.76e-01 0.0143 0.0912 0.293 CD4_TEM L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 9.85e-02 0.148 0.0893 0.293 CD4_TEM L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.94e-01 0.0564 0.106 0.293 CD8_CTL L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.80e-01 0.0122 0.0811 0.293 CD8_CTL L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.93e-01 0.000712 0.0788 0.293 CD8_CTL L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.23e-01 0.0862 0.0871 0.293 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 9.74e-02 -0.152 0.0911 0.293 CD8_CTL L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 1.99e-01 -0.111 0.0859 0.293 CD8_CTL L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 9.41e-02 0.162 0.0965 0.293 CD8_Naive L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 2.74e-01 0.0916 0.0835 0.293 CD8_Naive L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.09e-01 0.108 0.067 0.293 CD8_Naive L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 6.33e-02 0.12 0.064 0.293 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 5.18e-01 -0.0521 0.0805 0.293 CD8_Naive L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 7.07e-01 -0.0331 0.0877 0.293 CD8_Naive L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 1.48e-01 -0.16 0.11 0.289 CD8_TCM L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 7.12e-01 -0.0375 0.102 0.289 CD8_TCM L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.02e-01 -0.156 0.095 0.289 CD8_TCM L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 8.40e-01 0.0202 0.1 0.289 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 7.87e-01 -0.0251 0.0926 0.289 CD8_TCM L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 7.13e-01 -0.0345 0.0936 0.289 CD8_TCM L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 7.00e-01 -0.0389 0.101 0.295 CD8_TEM L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 5.69e-01 -0.0551 0.0966 0.295 CD8_TEM L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.61e-01 -0.00479 0.0989 0.295 CD8_TEM L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 5.97e-01 -0.0492 0.0929 0.295 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 4.53e-01 0.0724 0.0963 0.295 CD8_TEM L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 8.07e-01 0.0213 0.0873 0.295 CD8_TEM L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 6.35e-01 -0.049 0.103 0.294 MAIT L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 5.08e-01 -0.0606 0.0913 0.294 MAIT L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.16e-01 0.00923 0.0876 0.294 MAIT L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.88e-01 0.109 0.0823 0.294 MAIT L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 5.13e-01 0.0603 0.092 0.294 MAIT L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.18e-01 -0.0474 0.0948 0.294 MAIT L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.92e-01 -0.0572 0.106 0.298 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 1.34e-01 0.135 0.0895 0.298 NK_CD56bright L2
ENSG00000134644 PUM1 -438909 sc-eQTL 7.78e-01 -0.0266 0.0945 0.298 NK_CD56bright L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.50e-02 -0.186 0.0923 0.298 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.45e-01 -0.0884 0.0934 0.298 NK_CD56bright L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 5.64e-01 -0.0533 0.0922 0.298 NK_CD56bright L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 4.80e-01 -0.07 0.0988 0.293 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 3.69e-01 -0.0657 0.073 0.293 NK_CD56dim L2
ENSG00000134644 PUM1 -438909 sc-eQTL 3.73e-01 0.0668 0.0749 0.293 NK_CD56dim L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.81e-01 -0.0702 0.0799 0.293 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 5.99e-01 -0.0528 0.1 0.293 NK_CD56dim L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 8.61e-01 0.0145 0.0827 0.293 NK_CD56dim L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 8.29e-01 0.0227 0.105 0.295 NK_HLA L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 4.78e-02 -0.185 0.0929 0.295 NK_HLA L2
ENSG00000134644 PUM1 -438909 sc-eQTL 7.20e-01 0.0328 0.0914 0.295 NK_HLA L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.35e-01 -0.0682 0.0871 0.295 NK_HLA L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 6.34e-01 0.0443 0.0928 0.295 NK_HLA L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 4.50e-02 -0.179 0.0888 0.295 NK_HLA L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 9.66e-01 0.00412 0.0961 0.293 NK_cytokine L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 3.14e-01 0.0755 0.0748 0.293 NK_cytokine L2
ENSG00000134644 PUM1 -438909 sc-eQTL 7.76e-01 0.0231 0.081 0.293 NK_cytokine L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.21e-01 -0.0718 0.0891 0.293 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 1.87e-01 -0.125 0.0942 0.293 NK_cytokine L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.95e-01 -0.0346 0.088 0.293 NK_cytokine L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.33e-01 0.0677 0.108 0.319 PB L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 1.96e-01 -0.162 0.125 0.319 PB L2
ENSG00000134644 PUM1 -438909 sc-eQTL 8.17e-01 0.0253 0.109 0.319 PB L2
ENSG00000162510 MATN1 -96503 sc-eQTL 9.96e-01 0.000506 0.102 0.319 PB L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.74e-01 0.0521 0.0725 0.319 PB L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 6.51e-01 0.0451 0.0994 0.319 PB L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 8.71e-01 -0.0173 0.106 0.319 PB L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.74e-01 -0.0427 0.0758 0.293 Pro_T L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 2.64e-01 -0.107 0.0961 0.293 Pro_T L2
ENSG00000134644 PUM1 -438909 sc-eQTL 2.73e-01 -0.0985 0.0896 0.293 Pro_T L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.70e-01 0.0578 0.0643 0.293 Pro_T L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 4.29e-01 0.0713 0.09 0.293 Pro_T L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.14e-01 -0.0418 0.0828 0.293 Pro_T L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 5.02e-01 -0.0684 0.102 0.293 Treg L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.20e-01 0.0488 0.0983 0.293 Treg L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.16e-01 0.124 0.0783 0.293 Treg L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 8.32e-01 0.0191 0.0902 0.293 Treg L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 3.18e-01 -0.0917 0.0916 0.293 Treg L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 1.39e-01 0.135 0.0913 0.293 Treg L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 2.83e-01 0.109 0.101 0.298 cDC L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 4.69e-01 0.0793 0.109 0.298 cDC L2
ENSG00000134644 PUM1 -438909 sc-eQTL 6.40e-01 -0.044 0.0939 0.298 cDC L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.25e-01 0.0649 0.0657 0.298 cDC L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 1.53e-01 0.121 0.0841 0.298 cDC L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 1.14e-01 -0.131 0.0826 0.298 cDC L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.15e-02 0.167 0.0886 0.298 cDC L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 2.90e-01 -0.0855 0.0806 0.293 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 3.47e-01 0.0847 0.0899 0.293 cMono_IL1B L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.86e-01 0.0806 0.0607 0.293 cMono_IL1B L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.59e-01 0.0752 0.0533 0.293 cMono_IL1B L2
ENSG00000162512 SDC3 -281676 sc-eQTL 9.01e-01 -0.0125 0.101 0.293 cMono_IL1B L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 5.48e-01 -0.0614 0.102 0.293 cMono_IL1B L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 4.13e-01 -0.0738 0.0901 0.293 cMono_IL1B L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 2.92e-01 -0.0887 0.0839 0.293 cMono_IL1B L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 7.89e-01 0.0227 0.0849 0.293 cMono_S100A L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.15e-01 0.0505 0.1 0.293 cMono_S100A L2
ENSG00000134644 PUM1 -438909 sc-eQTL 5.70e-01 0.0413 0.0725 0.293 cMono_S100A L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.80e-01 0.049 0.0556 0.293 cMono_S100A L2
ENSG00000162512 SDC3 -281676 sc-eQTL 7.49e-01 0.0309 0.0963 0.293 cMono_S100A L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 8.26e-01 0.0224 0.102 0.293 cMono_S100A L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 3.14e-01 0.0835 0.0826 0.293 cMono_S100A L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 9.57e-02 -0.138 0.0826 0.293 cMono_S100A L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 6.05e-01 0.0676 0.13 0.315 gdT L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 4.87e-01 0.0779 0.112 0.315 gdT L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.24e-01 0.177 0.115 0.315 gdT L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 4.89e-01 0.0869 0.125 0.315 gdT L2
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 7.22e-01 0.0413 0.116 0.315 gdT L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 3.03e-01 -0.116 0.112 0.315 gdT L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 4.43e-01 0.0732 0.0951 0.291 intMono L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.95e-01 -0.0402 0.102 0.291 intMono L2
ENSG00000134644 PUM1 -438909 sc-eQTL 1.87e-02 -0.203 0.0857 0.291 intMono L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.69e-01 0.0612 0.068 0.291 intMono L2
ENSG00000162512 SDC3 -281676 sc-eQTL 9.31e-01 0.00811 0.0933 0.291 intMono L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 9.83e-01 -0.00204 0.0977 0.291 intMono L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 6.30e-01 -0.0446 0.0925 0.291 intMono L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 1.42e-01 -0.136 0.0921 0.291 intMono L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 9.43e-01 0.00638 0.0895 0.294 ncMono L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.70e-01 0.0407 0.0953 0.294 ncMono L2
ENSG00000134644 PUM1 -438909 sc-eQTL 5.70e-01 -0.0443 0.0779 0.294 ncMono L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 3.43e-01 0.0671 0.0706 0.294 ncMono L2
ENSG00000162512 SDC3 -281676 sc-eQTL 1.79e-01 -0.107 0.079 0.294 ncMono L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 7.97e-01 -0.0223 0.0866 0.294 ncMono L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 9.69e-01 0.00334 0.0865 0.294 ncMono L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.94e-01 0.0354 0.0897 0.294 ncMono L2
ENSG00000060688 SNRNP40 -669706 sc-eQTL 2.77e-01 -0.112 0.103 0.282 pDC L2
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 6.05e-01 0.0585 0.113 0.282 pDC L2
ENSG00000134644 PUM1 -438909 sc-eQTL 9.83e-01 -0.00201 0.0936 0.282 pDC L2
ENSG00000162511 LAPTM5 -130692 sc-eQTL 8.50e-01 0.0165 0.087 0.282 pDC L2
ENSG00000168528 SERINC2 -782483 sc-eQTL 3.63e-01 -0.0961 0.105 0.282 pDC L2
ENSG00000284543 LINC01226 -879144 sc-eQTL 7.31e-01 -0.0282 0.0819 0.282 pDC L2
ENSG00000287510 AL137857.1 -104611 sc-eQTL 4.10e-01 -0.0795 0.0962 0.282 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -669706 sc-eQTL 6.58e-01 0.0448 0.101 0.293 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.67e-01 -0.014 0.084 0.293 B_Memory LOneK1K
ENSG00000134644 PUM1 -438909 sc-eQTL 4.43e-01 0.0571 0.0744 0.293 B_Memory LOneK1K
ENSG00000162510 MATN1 -96503 sc-eQTL 1.60e-01 0.119 0.0845 0.293 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -130692 sc-eQTL 5.04e-01 0.0357 0.0533 0.293 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 2.37e-01 0.0834 0.0703 0.293 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -104611 sc-eQTL 3.42e-02 0.162 0.0761 0.293 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -669706 sc-eQTL 3.72e-01 0.0818 0.0914 0.293 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 5.02e-01 0.0486 0.0723 0.293 B_Naive LOneK1K
ENSG00000134644 PUM1 -438909 sc-eQTL 9.58e-01 -0.00361 0.0685 0.293 B_Naive LOneK1K
ENSG00000162510 MATN1 -96503 sc-eQTL 2.46e-01 0.0765 0.0657 0.293 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.53e-01 0.0663 0.0462 0.293 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 8.50e-01 0.0114 0.0599 0.293 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -104611 sc-eQTL 4.49e-01 0.0539 0.0711 0.293 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -669706 sc-eQTL 8.83e-01 -0.0113 0.0765 0.293 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 2.99e-01 0.0901 0.0864 0.293 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -438909 sc-eQTL 2.05e-01 0.0701 0.0551 0.293 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -130692 sc-eQTL 8.08e-02 0.0846 0.0482 0.293 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -281676 sc-eQTL 9.85e-01 -0.00188 0.0991 0.293 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -782483 sc-eQTL 7.27e-01 -0.0356 0.102 0.293 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -879144 sc-eQTL 6.40e-01 -0.0391 0.0836 0.293 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -104611 sc-eQTL 7.21e-02 -0.14 0.0777 0.293 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -669706 sc-eQTL 7.51e-01 0.027 0.0849 0.291 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 8.96e-01 -0.0122 0.0929 0.291 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -438909 sc-eQTL 1.52e-01 -0.109 0.0757 0.291 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -130692 sc-eQTL 1.09e-01 0.0974 0.0605 0.291 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -281676 sc-eQTL 9.81e-01 -0.00214 0.0889 0.291 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -782483 sc-eQTL 9.75e-01 0.00294 0.0922 0.291 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -879144 sc-eQTL 7.20e-01 -0.0314 0.0875 0.291 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -104611 sc-eQTL 6.21e-01 -0.0433 0.0876 0.291 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -669706 sc-eQTL 8.55e-01 -0.0173 0.0942 0.293 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -669900 sc-eQTL 9.73e-01 0.00219 0.0644 0.293 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -438909 sc-eQTL 5.74e-01 0.0397 0.0704 0.293 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -130692 sc-eQTL 2.90e-01 -0.0834 0.0786 0.293 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -91422 sc-eQTL 4.37e-01 -0.0707 0.0908 0.293 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -104611 sc-eQTL 5.77e-01 -0.0438 0.0784 0.293 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000168528 SERINC2 -782483 eQTL 0.0353 0.0921 0.0437 0.0 0.0 0.26

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -879199 2.67e-07 1.3e-07 5.14e-08 1.86e-07 9.24e-08 9.9e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.55e-07 9.19e-08 1.52e-07 7.13e-08 5.91e-08 7.49e-08 4.01e-08 1.33e-07 5.75e-08 4.31e-08 1.21e-07 1.24e-07 1.45e-07 3.03e-08 1.5e-07 1.26e-07 1.1e-07 9.61e-08 1.16e-07 1.07e-07 9.92e-08 3.08e-08 3.66e-08 8.11e-08 6.34e-08 3.2e-08 5.04e-08 8.72e-08 6.59e-08 3.71e-08 4.94e-08 1.36e-07 5.2e-08 1.42e-08 4.7e-08 1.84e-08 1.21e-07 1.88e-09 5.04e-08