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Genes within 1Mb (chr1:30624705:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.06e-01 0.0743 0.0891 0.261 B L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 7.32e-01 -0.0245 0.0715 0.261 B L1
ENSG00000134644 PUM1 -441286 sc-eQTL 6.21e-01 -0.0297 0.0599 0.261 B L1
ENSG00000162510 MATN1 -98880 sc-eQTL 6.52e-02 0.116 0.0625 0.261 B L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.91e-01 0.0522 0.0492 0.261 B L1
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 2.86e-01 0.0618 0.0577 0.261 B L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.53e-01 0.0976 0.0682 0.261 B L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 1.85e-01 -0.101 0.076 0.261 CD4T L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.76e-01 -0.025 0.0596 0.261 CD4T L1
ENSG00000134644 PUM1 -441286 sc-eQTL 3.60e-01 0.0486 0.053 0.261 CD4T L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.66e-01 0.0655 0.0587 0.261 CD4T L1
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 9.89e-01 -0.000721 0.0527 0.261 CD4T L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 4.64e-01 -0.0462 0.063 0.261 CD4T L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.57e-01 0.0584 0.0993 0.261 CD8T L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.74e-01 0.0279 0.0661 0.261 CD8T L1
ENSG00000134644 PUM1 -441286 sc-eQTL 1.79e-01 0.0781 0.058 0.261 CD8T L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.81e-01 0.0756 0.0563 0.261 CD8T L1
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 4.68e-01 -0.0481 0.0662 0.261 CD8T L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 4.23e-01 -0.0668 0.0832 0.261 CD8T L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.68e-01 -0.0653 0.0897 0.264 DC L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.04e-01 -0.109 0.106 0.264 DC L1
ENSG00000134644 PUM1 -441286 sc-eQTL 1.42e-01 -0.122 0.0829 0.264 DC L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.42e-01 0.0696 0.0593 0.264 DC L1
ENSG00000168528 SERINC2 -784860 sc-eQTL 4.40e-01 0.0759 0.098 0.264 DC L1
ENSG00000284543 LINC01226 -881521 sc-eQTL 9.18e-01 0.00669 0.065 0.264 DC L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.45e-01 0.137 0.0936 0.264 DC L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.25e-01 -0.0244 0.0694 0.261 Mono L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 5.56e-01 0.0507 0.0859 0.261 Mono L1
ENSG00000134644 PUM1 -441286 sc-eQTL 4.63e-01 0.0405 0.0551 0.261 Mono L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 8.45e-02 0.0873 0.0504 0.261 Mono L1
ENSG00000162512 SDC3 -284053 sc-eQTL 4.94e-01 -0.0667 0.0974 0.261 Mono L1
ENSG00000168528 SERINC2 -784860 sc-eQTL 4.90e-01 -0.0723 0.104 0.261 Mono L1
ENSG00000284543 LINC01226 -881521 sc-eQTL 8.08e-01 -0.0224 0.0921 0.261 Mono L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 8.22e-02 -0.14 0.0799 0.261 Mono L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 2.59e-01 -0.109 0.0966 0.262 NK L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.48e-01 0.0303 0.0663 0.262 NK L1
ENSG00000134644 PUM1 -441286 sc-eQTL 5.51e-01 0.0415 0.0695 0.262 NK L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 7.70e-01 -0.0235 0.0801 0.262 NK L1
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 2.36e-01 -0.107 0.0897 0.262 NK L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.78e-01 -0.0345 0.0831 0.262 NK L1
ENSG00000060688 SNRNP40 -672083 sc-eQTL 6.96e-01 0.0283 0.0724 0.261 Other_T L1
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 7.29e-01 0.0269 0.0774 0.261 Other_T L1
ENSG00000134644 PUM1 -441286 sc-eQTL 3.31e-01 0.0677 0.0695 0.261 Other_T L1
ENSG00000162511 LAPTM5 -133069 sc-eQTL 5.76e-02 0.108 0.0566 0.261 Other_T L1
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.36e-01 0.09 0.0932 0.261 Other_T L1
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.32e-01 -0.146 0.0968 0.261 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -672083 sc-eQTL 6.34e-01 0.0546 0.114 0.255 B_Activated L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.76e-01 -0.0483 0.115 0.255 B_Activated L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.55e-01 -0.0335 0.107 0.255 B_Activated L2
ENSG00000162510 MATN1 -98880 sc-eQTL 6.94e-01 0.0369 0.0938 0.255 B_Activated L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 6.82e-01 0.0269 0.0654 0.255 B_Activated L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 8.26e-01 0.0232 0.106 0.255 B_Activated L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 4.93e-01 -0.0641 0.0933 0.255 B_Activated L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.65e-01 -0.0637 0.11 0.262 B_Intermediate L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 7.87e-01 0.0249 0.0921 0.262 B_Intermediate L2
ENSG00000134644 PUM1 -441286 sc-eQTL 3.28e-01 0.085 0.0867 0.262 B_Intermediate L2
ENSG00000162510 MATN1 -98880 sc-eQTL 4.87e-01 0.0629 0.0903 0.262 B_Intermediate L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.29e-01 0.084 0.0552 0.262 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 1.98e-01 0.1 0.0776 0.262 B_Intermediate L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 8.53e-03 0.228 0.0857 0.262 B_Intermediate L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.61e-01 0.0786 0.106 0.263 B_Memory L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.71e-02 -0.167 0.0974 0.263 B_Memory L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.34e-01 0.00713 0.0853 0.263 B_Memory L2
ENSG00000162510 MATN1 -98880 sc-eQTL 5.05e-01 0.0545 0.0816 0.263 B_Memory L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 4.74e-01 0.0519 0.0723 0.263 B_Memory L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 7.88e-01 0.0223 0.0828 0.263 B_Memory L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.33e-01 0.145 0.0965 0.263 B_Memory L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 3.29e-01 0.0942 0.0964 0.261 B_Naive1 L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 9.65e-01 -0.00371 0.0834 0.261 B_Naive1 L2
ENSG00000134644 PUM1 -441286 sc-eQTL 5.16e-02 -0.143 0.0729 0.261 B_Naive1 L2
ENSG00000162510 MATN1 -98880 sc-eQTL 7.40e-02 0.133 0.0741 0.261 B_Naive1 L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 3.29e-01 0.0487 0.0498 0.261 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.92e-01 0.0561 0.0654 0.261 B_Naive1 L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.10e-01 0.0413 0.0809 0.261 B_Naive1 L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.10e-01 -0.0857 0.104 0.262 B_Naive2 L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 4.33e-01 0.0673 0.0857 0.262 B_Naive2 L2
ENSG00000134644 PUM1 -441286 sc-eQTL 4.55e-01 0.0628 0.0839 0.262 B_Naive2 L2
ENSG00000162510 MATN1 -98880 sc-eQTL 3.83e-01 0.0703 0.0805 0.262 B_Naive2 L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 6.76e-01 0.0229 0.0547 0.262 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 9.85e-01 0.00147 0.0798 0.262 B_Naive2 L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 5.66e-01 0.0495 0.0861 0.262 B_Naive2 L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.45e-01 -0.0779 0.102 0.261 CD4_CTL L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.16e-01 -0.1 0.0999 0.261 CD4_CTL L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.00e-01 0.161 0.0975 0.261 CD4_CTL L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 6.88e-01 -0.0351 0.0875 0.261 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 7.08e-01 0.0359 0.0957 0.261 CD4_CTL L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.71e-01 0.116 0.0841 0.261 CD4_CTL L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.08e-01 0.0526 0.0793 0.261 CD4_Naive L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.63e-01 -0.0307 0.0703 0.261 CD4_Naive L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.42e-01 0.0185 0.0562 0.261 CD4_Naive L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.02e-01 0.0982 0.0598 0.261 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 6.86e-01 -0.0247 0.0611 0.261 CD4_Naive L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.03e-02 -0.131 0.0696 0.261 CD4_Naive L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.55e-04 -0.332 0.0972 0.261 CD4_TCM L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.70e-01 -0.0131 0.0805 0.261 CD4_TCM L2
ENSG00000134644 PUM1 -441286 sc-eQTL 8.43e-01 0.0142 0.0713 0.261 CD4_TCM L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.93e-01 0.0622 0.059 0.261 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.49e-01 0.0703 0.0749 0.261 CD4_TCM L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.59e-01 0.0369 0.0835 0.261 CD4_TCM L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 6.12e-01 -0.0511 0.101 0.261 CD4_TEM L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.04e-01 0.0986 0.0956 0.261 CD4_TEM L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.82e-01 -0.0221 0.0798 0.261 CD4_TEM L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 5.31e-01 -0.0506 0.0807 0.261 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 7.41e-01 0.0313 0.0945 0.261 CD4_TEM L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 9.31e-02 0.156 0.0925 0.261 CD4_TEM L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 8.94e-01 -0.0146 0.109 0.261 CD8_CTL L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.19e-01 -0.0191 0.0834 0.261 CD8_CTL L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.27e-01 0.00747 0.081 0.261 CD8_CTL L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 3.56e-01 0.0828 0.0895 0.261 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 5.70e-02 -0.179 0.0935 0.261 CD8_CTL L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.33e-01 -0.0858 0.0885 0.261 CD8_CTL L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.42e-02 0.193 0.0997 0.261 CD8_Naive L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.20e-01 0.0863 0.0865 0.261 CD8_Naive L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.87e-02 0.163 0.0689 0.261 CD8_Naive L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.58e-01 0.0944 0.0666 0.261 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 2.86e-01 -0.0891 0.0833 0.261 CD8_Naive L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.09e-01 -0.0465 0.0909 0.261 CD8_Naive L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.78e-02 -0.2 0.113 0.259 CD8_TCM L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.38e-01 -0.0213 0.104 0.259 CD8_TCM L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.10e-01 -0.157 0.0975 0.259 CD8_TCM L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.12e-01 0.0113 0.103 0.259 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 6.31e-01 -0.0458 0.0951 0.259 CD8_TCM L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 5.71e-01 -0.0545 0.0961 0.259 CD8_TCM L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.68e-01 0.031 0.105 0.263 CD8_TEM L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 5.44e-01 -0.0612 0.101 0.263 CD8_TEM L2
ENSG00000134644 PUM1 -441286 sc-eQTL 8.58e-01 0.0185 0.103 0.263 CD8_TEM L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 3.85e-01 -0.0842 0.0967 0.263 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 5.43e-01 0.0612 0.1 0.263 CD8_TEM L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 4.30e-01 0.0718 0.0909 0.263 CD8_TEM L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.87e-01 -0.0582 0.107 0.262 MAIT L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 7.77e-01 -0.0269 0.0947 0.262 MAIT L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.84e-01 0.0249 0.0908 0.262 MAIT L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.13e-01 0.107 0.0854 0.262 MAIT L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 5.45e-01 0.0578 0.0954 0.262 MAIT L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.78e-01 -0.0867 0.0982 0.262 MAIT L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 6.99e-01 -0.0425 0.11 0.267 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.20e-02 0.173 0.0921 0.267 NK_CD56bright L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.01e-01 -0.0375 0.0975 0.267 NK_CD56bright L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.27e-01 -0.147 0.0957 0.267 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.31e-01 -0.0941 0.0965 0.267 NK_CD56bright L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.65e-01 -0.0413 0.0952 0.267 NK_CD56bright L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 1.16e-01 -0.161 0.102 0.261 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.51e-01 -0.0708 0.0758 0.261 NK_CD56dim L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.92e-01 0.102 0.0776 0.261 NK_CD56dim L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.73e-01 0.00286 0.0831 0.261 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.15e-01 -0.105 0.104 0.261 NK_CD56dim L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 8.66e-01 0.0145 0.0859 0.261 NK_CD56dim L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 9.38e-01 0.00851 0.11 0.26 NK_HLA L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.51e-02 -0.206 0.097 0.26 NK_HLA L2
ENSG00000134644 PUM1 -441286 sc-eQTL 5.53e-01 0.0567 0.0955 0.26 NK_HLA L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 6.73e-01 -0.0386 0.0912 0.26 NK_HLA L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 8.78e-01 -0.0149 0.0971 0.26 NK_HLA L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.29e-02 -0.199 0.0928 0.26 NK_HLA L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.95e-01 -0.0261 0.1 0.261 NK_cytokine L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.55e-02 0.144 0.0776 0.261 NK_cytokine L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.57e-01 0.00452 0.0846 0.261 NK_cytokine L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.64e-01 -0.00416 0.0932 0.261 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 4.49e-01 -0.0748 0.0986 0.261 NK_cytokine L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.93e-01 -0.0362 0.0918 0.261 NK_cytokine L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 9.49e-01 -0.00722 0.113 0.289 PB L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 1.24e-01 -0.201 0.13 0.289 PB L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.83e-01 0.00243 0.114 0.289 PB L2
ENSG00000162510 MATN1 -98880 sc-eQTL 7.15e-01 0.0388 0.106 0.289 PB L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.36e-01 0.113 0.075 0.289 PB L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 7.90e-01 0.0277 0.104 0.289 PB L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 8.11e-01 -0.0265 0.11 0.289 PB L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 6.80e-01 -0.0327 0.0791 0.261 Pro_T L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.79e-01 -0.0885 0.1 0.261 Pro_T L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.58e-01 -0.0289 0.0937 0.261 Pro_T L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.74e-01 0.00221 0.0672 0.261 Pro_T L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 6.12e-01 0.0476 0.0939 0.261 Pro_T L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 2.97e-01 -0.0902 0.0862 0.261 Pro_T L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 1.14e-01 -0.166 0.104 0.261 Treg L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 9.78e-01 -0.00279 0.102 0.261 Treg L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.64e-02 0.194 0.0802 0.261 Treg L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.12e-01 -0.0103 0.0931 0.261 Treg L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 1.53e-01 -0.135 0.0944 0.261 Treg L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.11e-01 0.151 0.0941 0.261 Treg L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 8.11e-01 0.0248 0.104 0.266 cDC L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.21e-01 0.0255 0.112 0.266 cDC L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.13e-01 0.0106 0.0964 0.266 cDC L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 3.76e-01 0.0598 0.0674 0.266 cDC L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 3.11e-01 0.0879 0.0865 0.266 cDC L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 1.19e-01 -0.133 0.0847 0.266 cDC L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.12e-01 0.146 0.0911 0.266 cDC L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.38e-01 -0.0648 0.0834 0.261 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.92e-01 0.0797 0.093 0.261 cMono_IL1B L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.57e-01 0.0891 0.0628 0.261 cMono_IL1B L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.94e-01 0.0718 0.0551 0.261 cMono_IL1B L2
ENSG00000162512 SDC3 -284053 sc-eQTL 9.77e-01 -0.00297 0.104 0.261 cMono_IL1B L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 4.55e-01 -0.0789 0.105 0.261 cMono_IL1B L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 6.66e-01 -0.0403 0.0933 0.261 cMono_IL1B L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.02e-01 -0.0899 0.0868 0.261 cMono_IL1B L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.34e-01 -0.0297 0.0875 0.261 cMono_S100A L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 9.74e-01 -0.00337 0.103 0.261 cMono_S100A L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.12e-01 0.0276 0.0747 0.261 cMono_S100A L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 4.40e-01 0.0444 0.0574 0.261 cMono_S100A L2
ENSG00000162512 SDC3 -284053 sc-eQTL 5.54e-01 -0.0588 0.0992 0.261 cMono_S100A L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 8.10e-01 -0.0253 0.105 0.261 cMono_S100A L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 2.95e-01 0.0893 0.0851 0.261 cMono_S100A L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.78e-02 -0.177 0.0848 0.261 cMono_S100A L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 5.38e-01 0.0837 0.136 0.282 gdT L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 4.18e-01 0.0946 0.116 0.282 gdT L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.11e-01 0.191 0.119 0.282 gdT L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 8.08e-01 0.0319 0.131 0.282 gdT L2
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 8.95e-01 0.016 0.121 0.282 gdT L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 1.86e-01 -0.154 0.116 0.282 gdT L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 8.25e-01 0.0218 0.0987 0.26 intMono L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 9.14e-01 -0.0114 0.106 0.26 intMono L2
ENSG00000134644 PUM1 -441286 sc-eQTL 1.11e-01 -0.143 0.0894 0.26 intMono L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 4.55e-01 0.0528 0.0705 0.26 intMono L2
ENSG00000162512 SDC3 -284053 sc-eQTL 9.72e-01 0.0034 0.0967 0.26 intMono L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 8.53e-01 0.0188 0.101 0.26 intMono L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 7.20e-01 -0.0344 0.0959 0.26 intMono L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.97e-02 -0.196 0.0949 0.26 intMono L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 9.51e-01 0.00569 0.0929 0.265 ncMono L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 8.78e-01 0.0152 0.099 0.265 ncMono L2
ENSG00000134644 PUM1 -441286 sc-eQTL 7.28e-01 -0.0282 0.0809 0.265 ncMono L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.56e-01 0.0834 0.0733 0.265 ncMono L2
ENSG00000162512 SDC3 -284053 sc-eQTL 2.78e-02 -0.18 0.0814 0.265 ncMono L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 8.25e-01 -0.0199 0.0899 0.265 ncMono L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 7.29e-01 0.0312 0.0898 0.265 ncMono L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 7.75e-01 0.0266 0.0931 0.265 ncMono L2
ENSG00000060688 SNRNP40 -672083 sc-eQTL 1.38e-01 -0.155 0.104 0.257 pDC L2
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.82e-01 0.047 0.114 0.257 pDC L2
ENSG00000134644 PUM1 -441286 sc-eQTL 9.82e-01 -0.00209 0.0949 0.257 pDC L2
ENSG00000162511 LAPTM5 -133069 sc-eQTL 6.88e-01 0.0355 0.0882 0.257 pDC L2
ENSG00000168528 SERINC2 -784860 sc-eQTL 5.73e-01 -0.0603 0.107 0.257 pDC L2
ENSG00000284543 LINC01226 -881521 sc-eQTL 7.36e-01 -0.028 0.083 0.257 pDC L2
ENSG00000287510 AL137857.1 -106988 sc-eQTL 5.56e-01 -0.0576 0.0976 0.257 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.63e-01 0.0767 0.104 0.261 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.72e-01 -0.0368 0.0868 0.261 B_Memory LOneK1K
ENSG00000134644 PUM1 -441286 sc-eQTL 4.65e-01 0.0563 0.0769 0.261 B_Memory LOneK1K
ENSG00000162510 MATN1 -98880 sc-eQTL 2.98e-01 0.0912 0.0875 0.261 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -133069 sc-eQTL 4.89e-01 0.0381 0.0551 0.261 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 2.78e-01 0.0791 0.0727 0.261 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -106988 sc-eQTL 2.59e-02 0.176 0.0786 0.261 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -672083 sc-eQTL 4.24e-01 0.0755 0.0942 0.261 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 3.89e-01 0.0642 0.0744 0.261 B_Naive LOneK1K
ENSG00000134644 PUM1 -441286 sc-eQTL 7.78e-01 -0.0199 0.0705 0.261 B_Naive LOneK1K
ENSG00000162510 MATN1 -98880 sc-eQTL 9.36e-02 0.114 0.0675 0.261 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -133069 sc-eQTL 2.00e-01 0.0612 0.0476 0.261 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 7.99e-01 0.0157 0.0617 0.261 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -106988 sc-eQTL 3.74e-01 0.0652 0.0732 0.261 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -672083 sc-eQTL 7.51e-01 -0.0251 0.0791 0.261 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 5.11e-01 0.0589 0.0895 0.261 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -441286 sc-eQTL 3.04e-01 0.0588 0.057 0.261 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -133069 sc-eQTL 7.17e-02 0.0902 0.0498 0.261 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -284053 sc-eQTL 7.68e-01 -0.0303 0.102 0.261 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -784860 sc-eQTL 5.28e-01 -0.0666 0.105 0.261 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -881521 sc-eQTL 9.21e-01 -0.00859 0.0864 0.261 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -106988 sc-eQTL 5.85e-02 -0.153 0.0802 0.261 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -672083 sc-eQTL 9.02e-01 0.0109 0.0881 0.259 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 9.00e-01 0.0122 0.0964 0.259 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -441286 sc-eQTL 1.95e-01 -0.102 0.0787 0.259 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -133069 sc-eQTL 1.54e-01 0.09 0.0629 0.259 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -284053 sc-eQTL 7.38e-01 -0.031 0.0923 0.259 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -784860 sc-eQTL 8.54e-01 0.0176 0.0957 0.259 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -881521 sc-eQTL 8.49e-01 -0.0173 0.0908 0.259 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -106988 sc-eQTL 2.98e-01 -0.0947 0.0907 0.259 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -672083 sc-eQTL 3.47e-01 -0.0919 0.0976 0.261 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -672277 sc-eQTL 6.62e-01 0.0292 0.0668 0.261 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -441286 sc-eQTL 3.84e-01 0.0637 0.073 0.261 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -133069 sc-eQTL 9.13e-01 -0.00899 0.0818 0.261 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -93799 sc-eQTL 3.25e-01 -0.0928 0.0941 0.261 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -106988 sc-eQTL 6.13e-01 -0.0412 0.0814 0.261 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -93799 eQTL 3.57e-02 -0.0311 0.0148 0.0 0.0 0.225

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -881576 2.74e-07 1.25e-07 4.48e-08 1.8e-07 9.16e-08 9.8e-08 1.49e-07 5.37e-08 1.45e-07 4.94e-08 1.62e-07 9e-08 1.45e-07 6.56e-08 6.02e-08 7.53e-08 3.93e-08 1.26e-07 5.39e-08 4.16e-08 1.08e-07 1.28e-07 1.39e-07 3.49e-08 1.4e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.02e-07 9.64e-08 3.66e-08 3.35e-08 8.34e-08 7.51e-08 3.62e-08 5.05e-08 9.23e-08 6.54e-08 4.02e-08 4.94e-08 1.35e-07 5.24e-08 2.4e-08 5.15e-08 1.83e-08 1.22e-07 3.79e-09 4.79e-08