logo

Genes within 1Mb (chr1:30616120:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -680668 sc-eQTL 4.93e-01 -0.0539 0.0784 0.393 B L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 9.19e-01 -0.00642 0.0629 0.393 B L1
ENSG00000134644 PUM1 -449871 sc-eQTL 9.23e-01 -0.00512 0.0528 0.393 B L1
ENSG00000162510 MATN1 -107465 sc-eQTL 8.60e-01 0.00981 0.0555 0.393 B L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 9.15e-01 -0.00464 0.0434 0.393 B L1
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.60e-01 -0.0156 0.0509 0.393 B L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 4.10e-01 -0.0497 0.0602 0.393 B L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.14e-01 -0.016 0.0682 0.393 CD4T L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.99e-01 0.0206 0.0533 0.393 CD4T L1
ENSG00000134644 PUM1 -449871 sc-eQTL 6.78e-01 -0.0197 0.0474 0.393 CD4T L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 2.17e-02 -0.12 0.0519 0.393 CD4T L1
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 8.07e-01 -0.0115 0.047 0.393 CD4T L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.09e-01 -0.0574 0.0562 0.393 CD4T L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.00e+00 -4.39e-05 0.0891 0.393 CD8T L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 7.42e-01 -0.0195 0.0593 0.393 CD8T L1
ENSG00000134644 PUM1 -449871 sc-eQTL 2.91e-01 -0.0552 0.0521 0.393 CD8T L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 2.27e-01 -0.0612 0.0505 0.393 CD8T L1
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 6.13e-02 0.111 0.0589 0.393 CD8T L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 9.65e-01 -0.00329 0.0747 0.393 CD8T L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 9.89e-01 0.00112 0.0783 0.392 DC L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.93e-01 0.0366 0.0926 0.392 DC L1
ENSG00000134644 PUM1 -449871 sc-eQTL 8.54e-01 0.0134 0.0726 0.392 DC L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 8.47e-02 -0.0891 0.0514 0.392 DC L1
ENSG00000168528 SERINC2 -793445 sc-eQTL 7.80e-02 -0.15 0.0848 0.392 DC L1
ENSG00000284543 LINC01226 -890106 sc-eQTL 6.28e-01 -0.0275 0.0566 0.392 DC L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.67e-02 -0.181 0.081 0.392 DC L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 4.31e-01 -0.0479 0.0607 0.393 Mono L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.67e-01 -0.0127 0.0753 0.393 Mono L1
ENSG00000134644 PUM1 -449871 sc-eQTL 1.25e-01 -0.0741 0.048 0.393 Mono L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 4.76e-02 -0.0877 0.044 0.393 Mono L1
ENSG00000162512 SDC3 -292638 sc-eQTL 6.60e-01 0.0376 0.0853 0.393 Mono L1
ENSG00000168528 SERINC2 -793445 sc-eQTL 5.90e-02 -0.172 0.0908 0.393 Mono L1
ENSG00000284543 LINC01226 -890106 sc-eQTL 3.79e-01 -0.071 0.0805 0.393 Mono L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 5.03e-01 0.0472 0.0705 0.393 Mono L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 4.75e-01 -0.0623 0.0871 0.395 NK L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 9.22e-01 -0.00581 0.0597 0.395 NK L1
ENSG00000134644 PUM1 -449871 sc-eQTL 9.30e-01 -0.0055 0.0626 0.395 NK L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 6.92e-01 -0.0285 0.072 0.395 NK L1
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.17e-01 -0.0293 0.0809 0.395 NK L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 1.70e-01 -0.102 0.0744 0.395 NK L1
ENSG00000060688 SNRNP40 -680668 sc-eQTL 2.18e-01 0.0786 0.0636 0.393 Other_T L1
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.76e-01 0.0285 0.0682 0.393 Other_T L1
ENSG00000134644 PUM1 -449871 sc-eQTL 7.96e-01 -0.0158 0.0614 0.393 Other_T L1
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.71e-01 -0.0687 0.0501 0.393 Other_T L1
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.95e-01 0.0214 0.0823 0.393 Other_T L1
ENSG00000287510 AL137857.1 -115573 sc-eQTL 8.51e-01 0.0161 0.0858 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.15e-01 -0.0242 0.103 0.398 B_Activated L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.19e-01 0.0239 0.104 0.398 B_Activated L2
ENSG00000134644 PUM1 -449871 sc-eQTL 7.26e-01 -0.0341 0.097 0.398 B_Activated L2
ENSG00000162510 MATN1 -107465 sc-eQTL 3.03e-01 -0.0873 0.0845 0.398 B_Activated L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.61e-01 0.0344 0.0591 0.398 B_Activated L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 4.37e-01 -0.0742 0.0953 0.398 B_Activated L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.45e-01 0.0982 0.0841 0.398 B_Activated L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.89e-01 0.0134 0.0958 0.391 B_Intermediate L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.16e-01 -0.0401 0.0798 0.391 B_Intermediate L2
ENSG00000134644 PUM1 -449871 sc-eQTL 9.36e-01 -0.00601 0.0753 0.391 B_Intermediate L2
ENSG00000162510 MATN1 -107465 sc-eQTL 2.80e-01 0.0846 0.0782 0.391 B_Intermediate L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.65e-01 -0.0667 0.0479 0.391 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.10e-01 -0.00768 0.0675 0.391 B_Intermediate L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 6.61e-02 -0.138 0.075 0.391 B_Intermediate L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.81e-01 0.0386 0.0937 0.392 B_Memory L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 5.68e-01 0.0493 0.0862 0.392 B_Memory L2
ENSG00000134644 PUM1 -449871 sc-eQTL 2.41e-01 -0.088 0.0749 0.392 B_Memory L2
ENSG00000162510 MATN1 -107465 sc-eQTL 1.84e-01 -0.0954 0.0716 0.392 B_Memory L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 3.52e-01 -0.0593 0.0636 0.392 B_Memory L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.56e-01 -0.00407 0.0729 0.392 B_Memory L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 4.41e-01 0.0659 0.0853 0.392 B_Memory L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.92e-01 -0.11 0.0842 0.393 B_Naive1 L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.53e-01 0.0329 0.073 0.393 B_Naive1 L2
ENSG00000134644 PUM1 -449871 sc-eQTL 2.83e-01 0.0691 0.0642 0.393 B_Naive1 L2
ENSG00000162510 MATN1 -107465 sc-eQTL 9.78e-01 -0.00179 0.0654 0.393 B_Naive1 L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.89e-01 -0.0573 0.0435 0.393 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 8.91e-01 -0.0079 0.0573 0.393 B_Naive1 L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 5.26e-01 -0.0449 0.0708 0.393 B_Naive1 L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.51e-01 0.0412 0.091 0.393 B_Naive2 L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 7.28e-01 0.0262 0.0751 0.393 B_Naive2 L2
ENSG00000134644 PUM1 -449871 sc-eQTL 3.00e-01 -0.0762 0.0733 0.393 B_Naive2 L2
ENSG00000162510 MATN1 -107465 sc-eQTL 3.27e-01 0.0692 0.0704 0.393 B_Naive2 L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 2.92e-01 -0.0505 0.0478 0.393 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 4.46e-01 -0.0532 0.0697 0.393 B_Naive2 L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.10e-01 -0.0766 0.0752 0.393 B_Naive2 L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 9.62e-01 0.00426 0.0904 0.391 CD4_CTL L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 7.53e-01 -0.0281 0.0889 0.391 CD4_CTL L2
ENSG00000134644 PUM1 -449871 sc-eQTL 5.35e-02 -0.168 0.0864 0.391 CD4_CTL L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 9.45e-01 -0.00536 0.0778 0.391 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 4.22e-01 0.0684 0.0849 0.391 CD4_CTL L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.21e-01 -0.0918 0.0748 0.391 CD4_CTL L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 3.07e-01 -0.0723 0.0706 0.393 CD4_Naive L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.21e-01 -0.0142 0.0627 0.393 CD4_Naive L2
ENSG00000134644 PUM1 -449871 sc-eQTL 9.68e-01 -0.002 0.0501 0.393 CD4_Naive L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 2.02e-02 -0.124 0.053 0.393 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.88e-01 0.0146 0.0545 0.393 CD4_Naive L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 6.51e-01 -0.0284 0.0625 0.393 CD4_Naive L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.27e-01 0.136 0.089 0.393 CD4_TCM L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 4.56e-02 0.144 0.0714 0.393 CD4_TCM L2
ENSG00000134644 PUM1 -449871 sc-eQTL 8.94e-01 -0.00849 0.0638 0.393 CD4_TCM L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.73e-02 -0.125 0.0523 0.393 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 1.70e-01 -0.0922 0.0669 0.393 CD4_TCM L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 6.05e-01 -0.0388 0.0748 0.393 CD4_TCM L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 7.38e-01 0.0296 0.0887 0.393 CD4_TEM L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 2.57e-01 -0.0958 0.0843 0.393 CD4_TEM L2
ENSG00000134644 PUM1 -449871 sc-eQTL 6.17e-01 -0.0352 0.0704 0.393 CD4_TEM L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 6.17e-01 -0.0356 0.0712 0.393 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.05e-01 -0.0315 0.0833 0.393 CD4_TEM L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 1.60e-01 -0.115 0.0817 0.393 CD4_TEM L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.37e-01 0.0198 0.0957 0.393 CD8_CTL L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 5.83e-01 -0.0403 0.0734 0.393 CD8_CTL L2
ENSG00000134644 PUM1 -449871 sc-eQTL 8.81e-01 -0.0107 0.0713 0.393 CD8_CTL L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 3.83e-01 -0.069 0.0788 0.393 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 2.47e-01 0.096 0.0827 0.393 CD8_CTL L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 1.49e-01 0.113 0.0777 0.393 CD8_CTL L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 5.17e-01 -0.0578 0.089 0.393 CD8_Naive L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 5.88e-01 0.0416 0.0768 0.393 CD8_Naive L2
ENSG00000134644 PUM1 -449871 sc-eQTL 5.58e-02 -0.118 0.0613 0.393 CD8_Naive L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.93e-02 -0.138 0.0585 0.393 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 2.00e-01 0.0946 0.0737 0.393 CD8_Naive L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.06e-01 -0.0823 0.0803 0.393 CD8_Naive L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.16e-01 0.0495 0.0985 0.394 CD8_TCM L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 2.03e-01 0.115 0.09 0.394 CD8_TCM L2
ENSG00000134644 PUM1 -449871 sc-eQTL 1.71e-01 0.116 0.0846 0.394 CD8_TCM L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 8.03e-01 -0.0222 0.0889 0.394 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 2.09e-01 0.103 0.082 0.394 CD8_TCM L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 1.23e-01 0.128 0.0827 0.394 CD8_TCM L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 7.07e-01 0.0351 0.0933 0.39 CD8_TEM L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 4.41e-01 -0.069 0.0894 0.39 CD8_TEM L2
ENSG00000134644 PUM1 -449871 sc-eQTL 4.53e-01 -0.0686 0.0914 0.39 CD8_TEM L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 6.54e-01 0.0386 0.086 0.39 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 4.76e-01 -0.0637 0.0892 0.39 CD8_TEM L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.43e-01 0.0766 0.0806 0.39 CD8_TEM L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.84e-01 0.125 0.0936 0.39 MAIT L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 3.58e-01 -0.0766 0.0831 0.39 MAIT L2
ENSG00000134644 PUM1 -449871 sc-eQTL 1.94e-01 0.104 0.0795 0.39 MAIT L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 7.19e-02 -0.135 0.0747 0.39 MAIT L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 5.92e-01 0.0449 0.0838 0.39 MAIT L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 5.71e-01 0.049 0.0864 0.39 MAIT L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 3.87e-01 -0.0838 0.0966 0.387 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 7.19e-01 -0.0295 0.0817 0.387 NK_CD56bright L2
ENSG00000134644 PUM1 -449871 sc-eQTL 9.86e-01 0.00152 0.0859 0.387 NK_CD56bright L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 7.50e-01 -0.027 0.0847 0.387 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 2.08e-01 0.107 0.0848 0.387 NK_CD56bright L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.81e-01 -0.0735 0.0837 0.387 NK_CD56bright L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.05e-01 -0.0477 0.0921 0.394 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 1.90e-01 0.0893 0.0679 0.394 NK_CD56dim L2
ENSG00000134644 PUM1 -449871 sc-eQTL 9.79e-01 0.00185 0.07 0.394 NK_CD56dim L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 9.85e-01 -0.00145 0.0746 0.394 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 6.64e-01 -0.0406 0.0934 0.394 NK_CD56dim L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 1.50e-01 -0.111 0.0767 0.394 NK_CD56dim L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.68e-01 0.132 0.0955 0.39 NK_HLA L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 9.57e-01 -0.00466 0.0857 0.39 NK_HLA L2
ENSG00000134644 PUM1 -449871 sc-eQTL 3.00e-01 -0.0865 0.0832 0.39 NK_HLA L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.96e-01 -0.0423 0.0796 0.39 NK_HLA L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.26e-01 -0.00785 0.0848 0.39 NK_HLA L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 8.56e-01 0.0149 0.0819 0.39 NK_HLA L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 5.64e-01 -0.0512 0.0887 0.394 NK_cytokine L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 2.65e-01 -0.0772 0.0691 0.394 NK_cytokine L2
ENSG00000134644 PUM1 -449871 sc-eQTL 7.93e-01 -0.0197 0.0749 0.394 NK_cytokine L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.32e-01 -0.0516 0.0824 0.394 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.15e-01 0.00937 0.0874 0.394 NK_cytokine L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 7.60e-01 -0.0249 0.0813 0.394 NK_cytokine L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 3.26e-01 -0.105 0.107 0.374 PB L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 2.01e-01 0.159 0.124 0.374 PB L2
ENSG00000134644 PUM1 -449871 sc-eQTL 7.63e-01 0.0326 0.108 0.374 PB L2
ENSG00000162510 MATN1 -107465 sc-eQTL 7.05e-01 0.0382 0.101 0.374 PB L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 8.68e-01 -0.0119 0.072 0.374 PB L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 6.48e-01 -0.0451 0.0984 0.374 PB L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 7.01e-02 0.189 0.103 0.374 PB L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 9.79e-01 0.00192 0.0718 0.393 Pro_T L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.08e-01 -0.0221 0.0912 0.393 Pro_T L2
ENSG00000134644 PUM1 -449871 sc-eQTL 6.88e-01 0.0342 0.085 0.393 Pro_T L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 6.38e-01 0.0287 0.061 0.393 Pro_T L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.26e-01 -0.0299 0.0852 0.393 Pro_T L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 8.47e-01 0.0152 0.0784 0.393 Pro_T L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.61e-02 0.157 0.0913 0.393 Treg L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.52e-01 -0.0166 0.0889 0.393 Treg L2
ENSG00000134644 PUM1 -449871 sc-eQTL 5.98e-01 -0.0376 0.0711 0.393 Treg L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 8.45e-02 -0.14 0.0809 0.393 Treg L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 6.08e-01 0.0426 0.083 0.393 Treg L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 7.13e-01 -0.0305 0.0829 0.393 Treg L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.74e-01 -0.0147 0.0922 0.385 cDC L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 3.83e-01 -0.0871 0.0997 0.385 cDC L2
ENSG00000134644 PUM1 -449871 sc-eQTL 6.51e-01 -0.0389 0.0857 0.385 cDC L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.24e-01 -0.0923 0.0597 0.385 cDC L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 4.03e-02 -0.158 0.0763 0.385 cDC L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 9.65e-01 -0.00329 0.0759 0.385 cDC L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.45e-01 -0.0948 0.0813 0.385 cDC L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 3.39e-01 -0.0702 0.0732 0.393 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.73e-01 -0.0132 0.0819 0.393 cMono_IL1B L2
ENSG00000134644 PUM1 -449871 sc-eQTL 1.41e-01 -0.0815 0.0551 0.393 cMono_IL1B L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 2.28e-01 -0.0586 0.0485 0.393 cMono_IL1B L2
ENSG00000162512 SDC3 -292638 sc-eQTL 3.03e-01 0.0943 0.0914 0.393 cMono_IL1B L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 4.26e-02 -0.187 0.0918 0.393 cMono_IL1B L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 6.26e-01 0.04 0.0819 0.393 cMono_IL1B L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 6.96e-01 0.0299 0.0764 0.393 cMono_IL1B L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 9.04e-01 0.0093 0.0774 0.393 cMono_S100A L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.98e-01 0.0118 0.0915 0.393 cMono_S100A L2
ENSG00000134644 PUM1 -449871 sc-eQTL 6.46e-01 -0.0304 0.0661 0.393 cMono_S100A L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.18e-01 -0.0329 0.0508 0.393 cMono_S100A L2
ENSG00000162512 SDC3 -292638 sc-eQTL 5.39e-01 -0.054 0.0877 0.393 cMono_S100A L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 2.05e-02 -0.214 0.0918 0.393 cMono_S100A L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 1.00e-01 -0.124 0.075 0.393 cMono_S100A L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.70e-01 0.0837 0.0756 0.393 cMono_S100A L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 5.04e-01 -0.0767 0.114 0.397 gdT L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.89e-01 0.0138 0.0984 0.397 gdT L2
ENSG00000134644 PUM1 -449871 sc-eQTL 6.53e-03 -0.273 0.0988 0.397 gdT L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 6.14e-01 -0.0557 0.11 0.397 gdT L2
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 5.34e-01 -0.0634 0.102 0.397 gdT L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 4.52e-01 0.0742 0.0984 0.397 gdT L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 1.14e-01 -0.138 0.087 0.4 intMono L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 3.64e-01 0.0855 0.094 0.4 intMono L2
ENSG00000134644 PUM1 -449871 sc-eQTL 8.65e-02 0.137 0.0793 0.4 intMono L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.49e-01 -0.0375 0.0626 0.4 intMono L2
ENSG00000162512 SDC3 -292638 sc-eQTL 7.41e-01 -0.0284 0.0858 0.4 intMono L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 8.92e-01 -0.0122 0.0898 0.4 intMono L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 5.68e-01 -0.0487 0.085 0.4 intMono L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 6.29e-01 0.0412 0.0851 0.4 intMono L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.84e-01 -0.033 0.081 0.389 ncMono L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 6.11e-01 0.044 0.0863 0.389 ncMono L2
ENSG00000134644 PUM1 -449871 sc-eQTL 9.90e-01 -0.000926 0.0706 0.389 ncMono L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.03e-01 -0.104 0.0637 0.389 ncMono L2
ENSG00000162512 SDC3 -292638 sc-eQTL 8.66e-01 0.0121 0.0718 0.389 ncMono L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 9.60e-01 -0.00395 0.0784 0.389 ncMono L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 6.59e-01 -0.0346 0.0783 0.389 ncMono L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 4.96e-01 -0.0553 0.0811 0.389 ncMono L2
ENSG00000060688 SNRNP40 -680668 sc-eQTL 8.36e-01 0.0194 0.0933 0.393 pDC L2
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.81e-01 -0.0153 0.102 0.393 pDC L2
ENSG00000134644 PUM1 -449871 sc-eQTL 1.85e-01 -0.112 0.0844 0.393 pDC L2
ENSG00000162511 LAPTM5 -141654 sc-eQTL 5.18e-01 -0.051 0.0788 0.393 pDC L2
ENSG00000168528 SERINC2 -793445 sc-eQTL 7.47e-01 -0.0309 0.0957 0.393 pDC L2
ENSG00000284543 LINC01226 -890106 sc-eQTL 5.55e-01 0.0439 0.0742 0.393 pDC L2
ENSG00000287510 AL137857.1 -115573 sc-eQTL 8.48e-01 0.0167 0.0874 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -680668 sc-eQTL 4.72e-01 -0.0657 0.0912 0.393 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.60e-01 -0.0134 0.076 0.393 B_Memory LOneK1K
ENSG00000134644 PUM1 -449871 sc-eQTL 3.31e-01 -0.0655 0.0672 0.393 B_Memory LOneK1K
ENSG00000162510 MATN1 -107465 sc-eQTL 7.73e-01 0.0222 0.0768 0.393 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -141654 sc-eQTL 4.43e-01 -0.037 0.0482 0.393 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.73e-01 -0.00213 0.0638 0.393 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.32e-01 -0.0832 0.0693 0.393 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.07e-01 -0.0426 0.0827 0.393 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.80e-01 0.00987 0.0654 0.393 B_Naive LOneK1K
ENSG00000134644 PUM1 -449871 sc-eQTL 6.56e-01 -0.0276 0.0619 0.393 B_Naive LOneK1K
ENSG00000162510 MATN1 -107465 sc-eQTL 8.30e-01 0.0128 0.0596 0.393 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.28e-01 -0.0637 0.0417 0.393 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 9.73e-01 0.00182 0.0542 0.393 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -115573 sc-eQTL 4.49e-01 -0.0487 0.0643 0.393 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -680668 sc-eQTL 6.06e-01 -0.0361 0.0698 0.393 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 5.90e-01 -0.0427 0.0791 0.393 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -449871 sc-eQTL 1.28e-01 -0.0768 0.0502 0.393 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -141654 sc-eQTL 1.18e-01 -0.0693 0.0441 0.393 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -292638 sc-eQTL 5.83e-01 0.0498 0.0904 0.393 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -793445 sc-eQTL 4.33e-02 -0.187 0.0922 0.393 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -890106 sc-eQTL 7.90e-01 -0.0203 0.0763 0.393 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -115573 sc-eQTL 3.66e-01 0.0646 0.0713 0.393 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -680668 sc-eQTL 2.93e-01 -0.0808 0.0766 0.397 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 1.80e-01 0.112 0.0836 0.397 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -449871 sc-eQTL 3.62e-01 0.0627 0.0687 0.397 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -141654 sc-eQTL 4.15e-02 -0.112 0.0545 0.397 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -292638 sc-eQTL 8.59e-01 0.0143 0.0804 0.397 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -793445 sc-eQTL 7.15e-01 -0.0304 0.0834 0.397 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -890106 sc-eQTL 5.09e-01 -0.0523 0.0791 0.397 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -115573 sc-eQTL 7.14e-01 -0.029 0.0792 0.397 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -680668 sc-eQTL 4.97e-01 -0.0598 0.0878 0.394 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -680862 sc-eQTL 8.03e-01 -0.015 0.0601 0.394 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -449871 sc-eQTL 6.89e-01 -0.0264 0.0658 0.394 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -141654 sc-eQTL 8.50e-01 -0.0139 0.0735 0.394 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -102384 sc-eQTL 7.75e-01 -0.0243 0.0848 0.394 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -115573 sc-eQTL 2.13e-01 -0.0912 0.0729 0.394 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -680668 eQTL 0.0425 -0.0349 0.0172 0.0 0.0 0.396

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina