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Genes within 1Mb (chr1:30614737:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -682051 sc-eQTL 4.93e-01 -0.0539 0.0784 0.393 B L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 9.19e-01 -0.00642 0.0629 0.393 B L1
ENSG00000134644 PUM1 -451254 sc-eQTL 9.23e-01 -0.00512 0.0528 0.393 B L1
ENSG00000162510 MATN1 -108848 sc-eQTL 8.60e-01 0.00981 0.0555 0.393 B L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 9.15e-01 -0.00464 0.0434 0.393 B L1
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.60e-01 -0.0156 0.0509 0.393 B L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 4.10e-01 -0.0497 0.0602 0.393 B L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.14e-01 -0.016 0.0682 0.393 CD4T L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.99e-01 0.0206 0.0533 0.393 CD4T L1
ENSG00000134644 PUM1 -451254 sc-eQTL 6.78e-01 -0.0197 0.0474 0.393 CD4T L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 2.17e-02 -0.12 0.0519 0.393 CD4T L1
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 8.07e-01 -0.0115 0.047 0.393 CD4T L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.09e-01 -0.0574 0.0562 0.393 CD4T L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.00e+00 -4.39e-05 0.0891 0.393 CD8T L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 7.42e-01 -0.0195 0.0593 0.393 CD8T L1
ENSG00000134644 PUM1 -451254 sc-eQTL 2.91e-01 -0.0552 0.0521 0.393 CD8T L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 2.27e-01 -0.0612 0.0505 0.393 CD8T L1
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 6.13e-02 0.111 0.0589 0.393 CD8T L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 9.65e-01 -0.00329 0.0747 0.393 CD8T L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 9.89e-01 0.00112 0.0783 0.392 DC L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.93e-01 0.0366 0.0926 0.392 DC L1
ENSG00000134644 PUM1 -451254 sc-eQTL 8.54e-01 0.0134 0.0726 0.392 DC L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 8.47e-02 -0.0891 0.0514 0.392 DC L1
ENSG00000168528 SERINC2 -794828 sc-eQTL 7.80e-02 -0.15 0.0848 0.392 DC L1
ENSG00000284543 LINC01226 -891489 sc-eQTL 6.28e-01 -0.0275 0.0566 0.392 DC L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.67e-02 -0.181 0.081 0.392 DC L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 4.31e-01 -0.0479 0.0607 0.393 Mono L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.67e-01 -0.0127 0.0753 0.393 Mono L1
ENSG00000134644 PUM1 -451254 sc-eQTL 1.25e-01 -0.0741 0.048 0.393 Mono L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 4.76e-02 -0.0877 0.044 0.393 Mono L1
ENSG00000162512 SDC3 -294021 sc-eQTL 6.60e-01 0.0376 0.0853 0.393 Mono L1
ENSG00000168528 SERINC2 -794828 sc-eQTL 5.90e-02 -0.172 0.0908 0.393 Mono L1
ENSG00000284543 LINC01226 -891489 sc-eQTL 3.79e-01 -0.071 0.0805 0.393 Mono L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 5.03e-01 0.0472 0.0705 0.393 Mono L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 4.75e-01 -0.0623 0.0871 0.395 NK L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 9.22e-01 -0.00581 0.0597 0.395 NK L1
ENSG00000134644 PUM1 -451254 sc-eQTL 9.30e-01 -0.0055 0.0626 0.395 NK L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 6.92e-01 -0.0285 0.072 0.395 NK L1
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.17e-01 -0.0293 0.0809 0.395 NK L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 1.70e-01 -0.102 0.0744 0.395 NK L1
ENSG00000060688 SNRNP40 -682051 sc-eQTL 2.18e-01 0.0786 0.0636 0.393 Other_T L1
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.76e-01 0.0285 0.0682 0.393 Other_T L1
ENSG00000134644 PUM1 -451254 sc-eQTL 7.96e-01 -0.0158 0.0614 0.393 Other_T L1
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.71e-01 -0.0687 0.0501 0.393 Other_T L1
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.95e-01 0.0214 0.0823 0.393 Other_T L1
ENSG00000287510 AL137857.1 -116956 sc-eQTL 8.51e-01 0.0161 0.0858 0.393 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.15e-01 -0.0242 0.103 0.398 B_Activated L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.19e-01 0.0239 0.104 0.398 B_Activated L2
ENSG00000134644 PUM1 -451254 sc-eQTL 7.26e-01 -0.0341 0.097 0.398 B_Activated L2
ENSG00000162510 MATN1 -108848 sc-eQTL 3.03e-01 -0.0873 0.0845 0.398 B_Activated L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.61e-01 0.0344 0.0591 0.398 B_Activated L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 4.37e-01 -0.0742 0.0953 0.398 B_Activated L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.45e-01 0.0982 0.0841 0.398 B_Activated L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.89e-01 0.0134 0.0958 0.391 B_Intermediate L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.16e-01 -0.0401 0.0798 0.391 B_Intermediate L2
ENSG00000134644 PUM1 -451254 sc-eQTL 9.36e-01 -0.00601 0.0753 0.391 B_Intermediate L2
ENSG00000162510 MATN1 -108848 sc-eQTL 2.80e-01 0.0846 0.0782 0.391 B_Intermediate L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.65e-01 -0.0667 0.0479 0.391 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.10e-01 -0.00768 0.0675 0.391 B_Intermediate L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 6.61e-02 -0.138 0.075 0.391 B_Intermediate L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.81e-01 0.0386 0.0937 0.392 B_Memory L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 5.68e-01 0.0493 0.0862 0.392 B_Memory L2
ENSG00000134644 PUM1 -451254 sc-eQTL 2.41e-01 -0.088 0.0749 0.392 B_Memory L2
ENSG00000162510 MATN1 -108848 sc-eQTL 1.84e-01 -0.0954 0.0716 0.392 B_Memory L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 3.52e-01 -0.0593 0.0636 0.392 B_Memory L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.56e-01 -0.00407 0.0729 0.392 B_Memory L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 4.41e-01 0.0659 0.0853 0.392 B_Memory L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.92e-01 -0.11 0.0842 0.393 B_Naive1 L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.53e-01 0.0329 0.073 0.393 B_Naive1 L2
ENSG00000134644 PUM1 -451254 sc-eQTL 2.83e-01 0.0691 0.0642 0.393 B_Naive1 L2
ENSG00000162510 MATN1 -108848 sc-eQTL 9.78e-01 -0.00179 0.0654 0.393 B_Naive1 L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.89e-01 -0.0573 0.0435 0.393 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 8.91e-01 -0.0079 0.0573 0.393 B_Naive1 L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 5.26e-01 -0.0449 0.0708 0.393 B_Naive1 L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.51e-01 0.0412 0.091 0.393 B_Naive2 L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 7.28e-01 0.0262 0.0751 0.393 B_Naive2 L2
ENSG00000134644 PUM1 -451254 sc-eQTL 3.00e-01 -0.0762 0.0733 0.393 B_Naive2 L2
ENSG00000162510 MATN1 -108848 sc-eQTL 3.27e-01 0.0692 0.0704 0.393 B_Naive2 L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 2.92e-01 -0.0505 0.0478 0.393 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 4.46e-01 -0.0532 0.0697 0.393 B_Naive2 L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.10e-01 -0.0766 0.0752 0.393 B_Naive2 L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 9.62e-01 0.00426 0.0904 0.391 CD4_CTL L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 7.53e-01 -0.0281 0.0889 0.391 CD4_CTL L2
ENSG00000134644 PUM1 -451254 sc-eQTL 5.35e-02 -0.168 0.0864 0.391 CD4_CTL L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 9.45e-01 -0.00536 0.0778 0.391 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 4.22e-01 0.0684 0.0849 0.391 CD4_CTL L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.21e-01 -0.0918 0.0748 0.391 CD4_CTL L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 3.07e-01 -0.0723 0.0706 0.393 CD4_Naive L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.21e-01 -0.0142 0.0627 0.393 CD4_Naive L2
ENSG00000134644 PUM1 -451254 sc-eQTL 9.68e-01 -0.002 0.0501 0.393 CD4_Naive L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 2.02e-02 -0.124 0.053 0.393 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.88e-01 0.0146 0.0545 0.393 CD4_Naive L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 6.51e-01 -0.0284 0.0625 0.393 CD4_Naive L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.27e-01 0.136 0.089 0.393 CD4_TCM L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 4.56e-02 0.144 0.0714 0.393 CD4_TCM L2
ENSG00000134644 PUM1 -451254 sc-eQTL 8.94e-01 -0.00849 0.0638 0.393 CD4_TCM L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.73e-02 -0.125 0.0523 0.393 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 1.70e-01 -0.0922 0.0669 0.393 CD4_TCM L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 6.05e-01 -0.0388 0.0748 0.393 CD4_TCM L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 7.38e-01 0.0296 0.0887 0.393 CD4_TEM L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 2.57e-01 -0.0958 0.0843 0.393 CD4_TEM L2
ENSG00000134644 PUM1 -451254 sc-eQTL 6.17e-01 -0.0352 0.0704 0.393 CD4_TEM L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 6.17e-01 -0.0356 0.0712 0.393 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.05e-01 -0.0315 0.0833 0.393 CD4_TEM L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 1.60e-01 -0.115 0.0817 0.393 CD4_TEM L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.37e-01 0.0198 0.0957 0.393 CD8_CTL L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 5.83e-01 -0.0403 0.0734 0.393 CD8_CTL L2
ENSG00000134644 PUM1 -451254 sc-eQTL 8.81e-01 -0.0107 0.0713 0.393 CD8_CTL L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 3.83e-01 -0.069 0.0788 0.393 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 2.47e-01 0.096 0.0827 0.393 CD8_CTL L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 1.49e-01 0.113 0.0777 0.393 CD8_CTL L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 5.17e-01 -0.0578 0.089 0.393 CD8_Naive L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 5.88e-01 0.0416 0.0768 0.393 CD8_Naive L2
ENSG00000134644 PUM1 -451254 sc-eQTL 5.58e-02 -0.118 0.0613 0.393 CD8_Naive L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.93e-02 -0.138 0.0585 0.393 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 2.00e-01 0.0946 0.0737 0.393 CD8_Naive L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.06e-01 -0.0823 0.0803 0.393 CD8_Naive L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.16e-01 0.0495 0.0985 0.394 CD8_TCM L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 2.03e-01 0.115 0.09 0.394 CD8_TCM L2
ENSG00000134644 PUM1 -451254 sc-eQTL 1.71e-01 0.116 0.0846 0.394 CD8_TCM L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 8.03e-01 -0.0222 0.0889 0.394 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 2.09e-01 0.103 0.082 0.394 CD8_TCM L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 1.23e-01 0.128 0.0827 0.394 CD8_TCM L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 7.07e-01 0.0351 0.0933 0.39 CD8_TEM L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 4.41e-01 -0.069 0.0894 0.39 CD8_TEM L2
ENSG00000134644 PUM1 -451254 sc-eQTL 4.53e-01 -0.0686 0.0914 0.39 CD8_TEM L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 6.54e-01 0.0386 0.086 0.39 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 4.76e-01 -0.0637 0.0892 0.39 CD8_TEM L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.43e-01 0.0766 0.0806 0.39 CD8_TEM L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.84e-01 0.125 0.0936 0.39 MAIT L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 3.58e-01 -0.0766 0.0831 0.39 MAIT L2
ENSG00000134644 PUM1 -451254 sc-eQTL 1.94e-01 0.104 0.0795 0.39 MAIT L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 7.19e-02 -0.135 0.0747 0.39 MAIT L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 5.92e-01 0.0449 0.0838 0.39 MAIT L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 5.71e-01 0.049 0.0864 0.39 MAIT L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 3.87e-01 -0.0838 0.0966 0.387 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 7.19e-01 -0.0295 0.0817 0.387 NK_CD56bright L2
ENSG00000134644 PUM1 -451254 sc-eQTL 9.86e-01 0.00152 0.0859 0.387 NK_CD56bright L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 7.50e-01 -0.027 0.0847 0.387 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 2.08e-01 0.107 0.0848 0.387 NK_CD56bright L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.81e-01 -0.0735 0.0837 0.387 NK_CD56bright L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.05e-01 -0.0477 0.0921 0.394 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 1.90e-01 0.0893 0.0679 0.394 NK_CD56dim L2
ENSG00000134644 PUM1 -451254 sc-eQTL 9.79e-01 0.00185 0.07 0.394 NK_CD56dim L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 9.85e-01 -0.00145 0.0746 0.394 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 6.64e-01 -0.0406 0.0934 0.394 NK_CD56dim L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 1.50e-01 -0.111 0.0767 0.394 NK_CD56dim L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.68e-01 0.132 0.0955 0.39 NK_HLA L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 9.57e-01 -0.00466 0.0857 0.39 NK_HLA L2
ENSG00000134644 PUM1 -451254 sc-eQTL 3.00e-01 -0.0865 0.0832 0.39 NK_HLA L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.96e-01 -0.0423 0.0796 0.39 NK_HLA L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.26e-01 -0.00785 0.0848 0.39 NK_HLA L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 8.56e-01 0.0149 0.0819 0.39 NK_HLA L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 5.64e-01 -0.0512 0.0887 0.394 NK_cytokine L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 2.65e-01 -0.0772 0.0691 0.394 NK_cytokine L2
ENSG00000134644 PUM1 -451254 sc-eQTL 7.93e-01 -0.0197 0.0749 0.394 NK_cytokine L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.32e-01 -0.0516 0.0824 0.394 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.15e-01 0.00937 0.0874 0.394 NK_cytokine L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 7.60e-01 -0.0249 0.0813 0.394 NK_cytokine L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 3.26e-01 -0.105 0.107 0.374 PB L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 2.01e-01 0.159 0.124 0.374 PB L2
ENSG00000134644 PUM1 -451254 sc-eQTL 7.63e-01 0.0326 0.108 0.374 PB L2
ENSG00000162510 MATN1 -108848 sc-eQTL 7.05e-01 0.0382 0.101 0.374 PB L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 8.68e-01 -0.0119 0.072 0.374 PB L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 6.48e-01 -0.0451 0.0984 0.374 PB L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 7.01e-02 0.189 0.103 0.374 PB L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 9.79e-01 0.00192 0.0718 0.393 Pro_T L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.08e-01 -0.0221 0.0912 0.393 Pro_T L2
ENSG00000134644 PUM1 -451254 sc-eQTL 6.88e-01 0.0342 0.085 0.393 Pro_T L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 6.38e-01 0.0287 0.061 0.393 Pro_T L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.26e-01 -0.0299 0.0852 0.393 Pro_T L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 8.47e-01 0.0152 0.0784 0.393 Pro_T L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.61e-02 0.157 0.0913 0.393 Treg L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.52e-01 -0.0166 0.0889 0.393 Treg L2
ENSG00000134644 PUM1 -451254 sc-eQTL 5.98e-01 -0.0376 0.0711 0.393 Treg L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 8.45e-02 -0.14 0.0809 0.393 Treg L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 6.08e-01 0.0426 0.083 0.393 Treg L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 7.13e-01 -0.0305 0.0829 0.393 Treg L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.74e-01 -0.0147 0.0922 0.385 cDC L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 3.83e-01 -0.0871 0.0997 0.385 cDC L2
ENSG00000134644 PUM1 -451254 sc-eQTL 6.51e-01 -0.0389 0.0857 0.385 cDC L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.24e-01 -0.0923 0.0597 0.385 cDC L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 4.03e-02 -0.158 0.0763 0.385 cDC L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 9.65e-01 -0.00329 0.0759 0.385 cDC L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.45e-01 -0.0948 0.0813 0.385 cDC L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 3.39e-01 -0.0702 0.0732 0.393 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.73e-01 -0.0132 0.0819 0.393 cMono_IL1B L2
ENSG00000134644 PUM1 -451254 sc-eQTL 1.41e-01 -0.0815 0.0551 0.393 cMono_IL1B L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 2.28e-01 -0.0586 0.0485 0.393 cMono_IL1B L2
ENSG00000162512 SDC3 -294021 sc-eQTL 3.03e-01 0.0943 0.0914 0.393 cMono_IL1B L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 4.26e-02 -0.187 0.0918 0.393 cMono_IL1B L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 6.26e-01 0.04 0.0819 0.393 cMono_IL1B L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 6.96e-01 0.0299 0.0764 0.393 cMono_IL1B L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 9.04e-01 0.0093 0.0774 0.393 cMono_S100A L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.98e-01 0.0118 0.0915 0.393 cMono_S100A L2
ENSG00000134644 PUM1 -451254 sc-eQTL 6.46e-01 -0.0304 0.0661 0.393 cMono_S100A L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.18e-01 -0.0329 0.0508 0.393 cMono_S100A L2
ENSG00000162512 SDC3 -294021 sc-eQTL 5.39e-01 -0.054 0.0877 0.393 cMono_S100A L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 2.05e-02 -0.214 0.0918 0.393 cMono_S100A L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 1.00e-01 -0.124 0.075 0.393 cMono_S100A L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.70e-01 0.0837 0.0756 0.393 cMono_S100A L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 5.04e-01 -0.0767 0.114 0.397 gdT L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.89e-01 0.0138 0.0984 0.397 gdT L2
ENSG00000134644 PUM1 -451254 sc-eQTL 6.53e-03 -0.273 0.0988 0.397 gdT L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 6.14e-01 -0.0557 0.11 0.397 gdT L2
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 5.34e-01 -0.0634 0.102 0.397 gdT L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 4.52e-01 0.0742 0.0984 0.397 gdT L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 1.14e-01 -0.138 0.087 0.4 intMono L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 3.64e-01 0.0855 0.094 0.4 intMono L2
ENSG00000134644 PUM1 -451254 sc-eQTL 8.65e-02 0.137 0.0793 0.4 intMono L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.49e-01 -0.0375 0.0626 0.4 intMono L2
ENSG00000162512 SDC3 -294021 sc-eQTL 7.41e-01 -0.0284 0.0858 0.4 intMono L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 8.92e-01 -0.0122 0.0898 0.4 intMono L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 5.68e-01 -0.0487 0.085 0.4 intMono L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 6.29e-01 0.0412 0.0851 0.4 intMono L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.84e-01 -0.033 0.081 0.389 ncMono L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 6.11e-01 0.044 0.0863 0.389 ncMono L2
ENSG00000134644 PUM1 -451254 sc-eQTL 9.90e-01 -0.000926 0.0706 0.389 ncMono L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.03e-01 -0.104 0.0637 0.389 ncMono L2
ENSG00000162512 SDC3 -294021 sc-eQTL 8.66e-01 0.0121 0.0718 0.389 ncMono L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 9.60e-01 -0.00395 0.0784 0.389 ncMono L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 6.59e-01 -0.0346 0.0783 0.389 ncMono L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 4.96e-01 -0.0553 0.0811 0.389 ncMono L2
ENSG00000060688 SNRNP40 -682051 sc-eQTL 8.36e-01 0.0194 0.0933 0.393 pDC L2
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.81e-01 -0.0153 0.102 0.393 pDC L2
ENSG00000134644 PUM1 -451254 sc-eQTL 1.85e-01 -0.112 0.0844 0.393 pDC L2
ENSG00000162511 LAPTM5 -143037 sc-eQTL 5.18e-01 -0.051 0.0788 0.393 pDC L2
ENSG00000168528 SERINC2 -794828 sc-eQTL 7.47e-01 -0.0309 0.0957 0.393 pDC L2
ENSG00000284543 LINC01226 -891489 sc-eQTL 5.55e-01 0.0439 0.0742 0.393 pDC L2
ENSG00000287510 AL137857.1 -116956 sc-eQTL 8.48e-01 0.0167 0.0874 0.393 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -682051 sc-eQTL 4.72e-01 -0.0657 0.0912 0.393 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.60e-01 -0.0134 0.076 0.393 B_Memory LOneK1K
ENSG00000134644 PUM1 -451254 sc-eQTL 3.31e-01 -0.0655 0.0672 0.393 B_Memory LOneK1K
ENSG00000162510 MATN1 -108848 sc-eQTL 7.73e-01 0.0222 0.0768 0.393 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -143037 sc-eQTL 4.43e-01 -0.037 0.0482 0.393 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.73e-01 -0.00213 0.0638 0.393 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.32e-01 -0.0832 0.0693 0.393 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.07e-01 -0.0426 0.0827 0.393 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.80e-01 0.00987 0.0654 0.393 B_Naive LOneK1K
ENSG00000134644 PUM1 -451254 sc-eQTL 6.56e-01 -0.0276 0.0619 0.393 B_Naive LOneK1K
ENSG00000162510 MATN1 -108848 sc-eQTL 8.30e-01 0.0128 0.0596 0.393 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.28e-01 -0.0637 0.0417 0.393 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 9.73e-01 0.00182 0.0542 0.393 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -116956 sc-eQTL 4.49e-01 -0.0487 0.0643 0.393 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -682051 sc-eQTL 6.06e-01 -0.0361 0.0698 0.393 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 5.90e-01 -0.0427 0.0791 0.393 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -451254 sc-eQTL 1.28e-01 -0.0768 0.0502 0.393 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -143037 sc-eQTL 1.18e-01 -0.0693 0.0441 0.393 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -294021 sc-eQTL 5.83e-01 0.0498 0.0904 0.393 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -794828 sc-eQTL 4.33e-02 -0.187 0.0922 0.393 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -891489 sc-eQTL 7.90e-01 -0.0203 0.0763 0.393 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -116956 sc-eQTL 3.66e-01 0.0646 0.0713 0.393 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -682051 sc-eQTL 2.93e-01 -0.0808 0.0766 0.397 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 1.80e-01 0.112 0.0836 0.397 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -451254 sc-eQTL 3.62e-01 0.0627 0.0687 0.397 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -143037 sc-eQTL 4.15e-02 -0.112 0.0545 0.397 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -294021 sc-eQTL 8.59e-01 0.0143 0.0804 0.397 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -794828 sc-eQTL 7.15e-01 -0.0304 0.0834 0.397 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -891489 sc-eQTL 5.09e-01 -0.0523 0.0791 0.397 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -116956 sc-eQTL 7.14e-01 -0.029 0.0792 0.397 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -682051 sc-eQTL 4.97e-01 -0.0598 0.0878 0.394 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -682245 sc-eQTL 8.03e-01 -0.015 0.0601 0.394 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -451254 sc-eQTL 6.89e-01 -0.0264 0.0658 0.394 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -143037 sc-eQTL 8.50e-01 -0.0139 0.0735 0.394 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -103767 sc-eQTL 7.75e-01 -0.0243 0.0848 0.394 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -116956 sc-eQTL 2.13e-01 -0.0912 0.0729 0.394 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -682051 eQTL 0.0312 -0.0371 0.0172 0.00104 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina