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Genes within 1Mb (chr1:30612328:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.08e-01 -0.0781 0.0765 0.562 B L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.91e-01 0.0803 0.0612 0.562 B L1
ENSG00000134644 PUM1 -453663 sc-eQTL 8.56e-01 0.00937 0.0515 0.562 B L1
ENSG00000162510 MATN1 -111257 sc-eQTL 7.22e-01 -0.0193 0.0542 0.562 B L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.11e-01 0.0531 0.0423 0.562 B L1
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 7.99e-01 -0.0127 0.0497 0.562 B L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 6.70e-01 -0.0251 0.0588 0.562 B L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 8.82e-01 0.00985 0.0664 0.562 CD4T L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 5.49e-01 0.0311 0.0518 0.562 CD4T L1
ENSG00000134644 PUM1 -453663 sc-eQTL 6.56e-01 -0.0206 0.0462 0.562 CD4T L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 6.35e-02 -0.0947 0.0508 0.562 CD4T L1
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.37e-01 -0.00361 0.0458 0.562 CD4T L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 4.68e-01 0.0398 0.0548 0.562 CD4T L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 9.92e-01 0.000839 0.0869 0.562 CD8T L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.33e-01 0.00485 0.0578 0.562 CD8T L1
ENSG00000134644 PUM1 -453663 sc-eQTL 3.81e-01 -0.0447 0.0508 0.562 CD8T L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 9.61e-01 -0.00245 0.0495 0.562 CD8T L1
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 3.10e-01 0.0589 0.0578 0.562 CD8T L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.65e-01 0.0419 0.0728 0.562 CD8T L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.65e-01 0.0868 0.0776 0.561 DC L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.70e-01 0.0151 0.0921 0.561 DC L1
ENSG00000134644 PUM1 -453663 sc-eQTL 6.13e-01 -0.0366 0.0721 0.561 DC L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 5.97e-02 -0.0967 0.0511 0.561 DC L1
ENSG00000168528 SERINC2 -797237 sc-eQTL 3.36e-01 -0.0818 0.0848 0.561 DC L1
ENSG00000284543 LINC01226 -893898 sc-eQTL 3.25e-01 -0.0554 0.0561 0.561 DC L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.64e-01 -0.113 0.0811 0.561 DC L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 8.33e-01 -0.0127 0.0602 0.562 Mono L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.90e-01 -0.0103 0.0746 0.562 Mono L1
ENSG00000134644 PUM1 -453663 sc-eQTL 2.03e-03 -0.146 0.0468 0.562 Mono L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.35e-01 -0.0523 0.0439 0.562 Mono L1
ENSG00000162512 SDC3 -296430 sc-eQTL 3.64e-01 0.0768 0.0844 0.562 Mono L1
ENSG00000168528 SERINC2 -797237 sc-eQTL 5.17e-01 -0.0589 0.0907 0.562 Mono L1
ENSG00000284543 LINC01226 -893898 sc-eQTL 4.98e-01 -0.0542 0.0799 0.562 Mono L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 7.76e-02 0.123 0.0694 0.562 Mono L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 7.35e-01 0.0282 0.0835 0.562 NK L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 7.32e-01 -0.0196 0.0571 0.562 NK L1
ENSG00000134644 PUM1 -453663 sc-eQTL 5.57e-01 -0.0352 0.0599 0.562 NK L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.62e-01 0.0773 0.0688 0.562 NK L1
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.09e-01 0.00889 0.0775 0.562 NK L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.93e-01 0.0383 0.0715 0.562 NK L1
ENSG00000060688 SNRNP40 -684460 sc-eQTL 1.96e-01 0.0823 0.0634 0.562 Other_T L1
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.36e-01 0.00548 0.068 0.562 Other_T L1
ENSG00000134644 PUM1 -453663 sc-eQTL 5.98e-01 0.0323 0.0611 0.562 Other_T L1
ENSG00000162511 LAPTM5 -145446 sc-eQTL 4.30e-01 -0.0396 0.05 0.562 Other_T L1
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.39e-01 0.0385 0.082 0.562 Other_T L1
ENSG00000287510 AL137857.1 -119365 sc-eQTL 2.21e-01 0.105 0.0852 0.562 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -684460 sc-eQTL 4.79e-01 -0.0708 0.0999 0.569 B_Activated L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.86e-01 0.0144 0.101 0.569 B_Activated L2
ENSG00000134644 PUM1 -453663 sc-eQTL 5.62e-01 0.0545 0.0937 0.569 B_Activated L2
ENSG00000162510 MATN1 -111257 sc-eQTL 3.58e-01 -0.0754 0.0818 0.569 B_Activated L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 5.95e-01 0.0304 0.0571 0.569 B_Activated L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.26e-02 -0.171 0.0914 0.569 B_Activated L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 3.17e-01 0.0817 0.0814 0.569 B_Activated L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 9.77e-01 0.00269 0.0947 0.56 B_Intermediate L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 2.74e-01 0.0863 0.0787 0.56 B_Intermediate L2
ENSG00000134644 PUM1 -453663 sc-eQTL 1.35e-01 -0.111 0.074 0.56 B_Intermediate L2
ENSG00000162510 MATN1 -111257 sc-eQTL 5.27e-01 -0.049 0.0774 0.56 B_Intermediate L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 5.68e-01 -0.0272 0.0475 0.56 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.82e-01 0.0274 0.0667 0.56 B_Intermediate L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.05e-01 -0.121 0.0742 0.56 B_Intermediate L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 9.22e-01 -0.00889 0.0913 0.56 B_Memory L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.82e-01 0.112 0.0837 0.56 B_Memory L2
ENSG00000134644 PUM1 -453663 sc-eQTL 7.43e-01 -0.024 0.0732 0.56 B_Memory L2
ENSG00000162510 MATN1 -111257 sc-eQTL 5.76e-01 -0.0391 0.07 0.56 B_Memory L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 8.16e-01 0.0145 0.062 0.56 B_Memory L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 4.53e-01 -0.0533 0.0709 0.56 B_Memory L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 4.96e-01 -0.0567 0.0831 0.56 B_Memory L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 1.27e-01 -0.127 0.083 0.562 B_Naive1 L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 4.19e-01 0.0583 0.0719 0.562 B_Naive1 L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.92e-02 0.115 0.0631 0.562 B_Naive1 L2
ENSG00000162510 MATN1 -111257 sc-eQTL 6.54e-01 -0.0289 0.0645 0.562 B_Naive1 L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 9.35e-01 -0.00353 0.0431 0.562 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 7.06e-01 -0.0214 0.0566 0.562 B_Naive1 L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 8.99e-01 -0.00885 0.0699 0.562 B_Naive1 L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 9.72e-01 0.00309 0.0892 0.562 B_Naive2 L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 7.44e-01 0.0241 0.0736 0.562 B_Naive2 L2
ENSG00000134644 PUM1 -453663 sc-eQTL 3.26e-01 -0.0707 0.0719 0.562 B_Naive2 L2
ENSG00000162510 MATN1 -111257 sc-eQTL 9.91e-01 0.000744 0.0692 0.562 B_Naive2 L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 4.45e-01 0.0359 0.0469 0.562 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.03e-01 0.0083 0.0684 0.562 B_Naive2 L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 8.06e-01 -0.0182 0.0739 0.562 B_Naive2 L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 8.22e-01 -0.0202 0.0897 0.561 CD4_CTL L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 5.35e-01 0.0547 0.0882 0.561 CD4_CTL L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.29e-01 -0.0419 0.0865 0.561 CD4_CTL L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 6.58e-01 0.0342 0.0771 0.561 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 3.03e-01 0.0869 0.0842 0.561 CD4_CTL L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 4.10e-01 -0.0613 0.0743 0.561 CD4_CTL L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 5.34e-01 -0.0431 0.0691 0.562 CD4_Naive L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.76e-01 -0.00188 0.0614 0.562 CD4_Naive L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.52e-01 -0.0221 0.049 0.562 CD4_Naive L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 6.71e-02 -0.0958 0.0521 0.562 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.25e-01 0.0261 0.0532 0.562 CD4_Naive L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 3.09e-01 0.0623 0.061 0.562 CD4_Naive L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.34e-02 0.184 0.0858 0.562 CD4_TCM L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.36e-01 0.104 0.0696 0.562 CD4_TCM L2
ENSG00000134644 PUM1 -453663 sc-eQTL 5.17e-01 0.0402 0.0618 0.562 CD4_TCM L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 4.16e-02 -0.104 0.0508 0.562 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 1.79e-01 -0.0874 0.0649 0.562 CD4_TCM L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 9.84e-01 0.00144 0.0726 0.562 CD4_TCM L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 6.34e-01 0.0416 0.0872 0.562 CD4_TEM L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 7.14e-01 -0.0305 0.0832 0.562 CD4_TEM L2
ENSG00000134644 PUM1 -453663 sc-eQTL 4.01e-01 -0.0582 0.0692 0.562 CD4_TEM L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.71e-01 0.0771 0.0699 0.562 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 4.75e-01 0.0586 0.0819 0.562 CD4_TEM L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.08e-01 -0.129 0.0803 0.562 CD4_TEM L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 6.77e-01 0.0392 0.0938 0.562 CD8_CTL L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.99e-01 0.00914 0.0719 0.562 CD8_CTL L2
ENSG00000134644 PUM1 -453663 sc-eQTL 9.97e-01 -0.00028 0.0699 0.562 CD8_CTL L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 8.89e-01 0.0108 0.0774 0.562 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 3.82e-01 0.0711 0.0812 0.562 CD8_CTL L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.00e-01 0.125 0.076 0.562 CD8_CTL L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.62e-01 -0.0983 0.0875 0.562 CD8_Naive L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.61e-01 -0.00373 0.0757 0.562 CD8_Naive L2
ENSG00000134644 PUM1 -453663 sc-eQTL 5.07e-02 -0.119 0.0604 0.562 CD8_Naive L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 1.43e-01 -0.0854 0.0581 0.562 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 2.37e-01 0.0862 0.0726 0.562 CD8_Naive L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.32e-01 -0.0495 0.0792 0.562 CD8_Naive L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.33e-01 0.115 0.0963 0.565 CD8_TCM L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 6.00e-01 0.0465 0.0885 0.565 CD8_TCM L2
ENSG00000134644 PUM1 -453663 sc-eQTL 7.71e-03 0.22 0.0818 0.565 CD8_TCM L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 5.78e-01 0.0486 0.0871 0.565 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 2.74e-01 0.0883 0.0805 0.565 CD8_TCM L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 8.35e-01 0.017 0.0816 0.565 CD8_TCM L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 4.35e-01 -0.0708 0.0904 0.555 CD8_TEM L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 4.61e-01 0.0641 0.0867 0.555 CD8_TEM L2
ENSG00000134644 PUM1 -453663 sc-eQTL 8.46e-01 0.0172 0.0887 0.555 CD8_TEM L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 3.70e-01 0.0749 0.0833 0.555 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 7.72e-01 -0.0252 0.0866 0.555 CD8_TEM L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 6.29e-01 0.0379 0.0783 0.555 CD8_TEM L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.79e-02 0.19 0.0912 0.558 MAIT L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.54e-01 -0.015 0.0816 0.558 MAIT L2
ENSG00000134644 PUM1 -453663 sc-eQTL 1.38e-01 0.116 0.0778 0.558 MAIT L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 1.92e-01 -0.0963 0.0735 0.558 MAIT L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.25e-01 0.00771 0.0822 0.558 MAIT L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.39e-01 0.0521 0.0846 0.558 MAIT L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 9.64e-01 -0.00425 0.0939 0.558 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 3.39e-01 -0.0759 0.0791 0.558 NK_CD56bright L2
ENSG00000134644 PUM1 -453663 sc-eQTL 8.20e-01 -0.019 0.0833 0.558 NK_CD56bright L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 7.97e-01 0.0211 0.0821 0.558 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 8.72e-01 -0.0133 0.0825 0.558 NK_CD56bright L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.91e-01 -0.0438 0.0813 0.558 NK_CD56bright L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.89e-01 0.0762 0.0883 0.562 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.62e-01 0.0913 0.0651 0.562 NK_CD56dim L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.20e-01 -0.0333 0.0671 0.562 NK_CD56dim L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.39e-01 0.0843 0.0714 0.562 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.07e-01 0.0105 0.0897 0.562 NK_CD56dim L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 7.87e-01 -0.02 0.074 0.562 NK_CD56dim L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.04e-01 0.0957 0.0929 0.566 NK_HLA L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.20e-01 -0.0084 0.0832 0.566 NK_HLA L2
ENSG00000134644 PUM1 -453663 sc-eQTL 7.12e-01 -0.0299 0.081 0.566 NK_HLA L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 4.03e-01 0.0648 0.0772 0.566 NK_HLA L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.73e-01 0.0347 0.0823 0.566 NK_HLA L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 5.48e-02 0.152 0.0788 0.566 NK_HLA L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 8.00e-01 -0.0221 0.087 0.562 NK_cytokine L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 2.41e-02 -0.152 0.0671 0.562 NK_cytokine L2
ENSG00000134644 PUM1 -453663 sc-eQTL 5.94e-01 -0.0392 0.0734 0.562 NK_cytokine L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 6.83e-01 0.033 0.0808 0.562 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 6.58e-01 0.0379 0.0856 0.562 NK_cytokine L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 7.20e-01 0.0286 0.0797 0.562 NK_cytokine L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 4.31e-01 0.0793 0.1 0.533 PB L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.86e-01 0.154 0.116 0.533 PB L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.97e-01 0.0395 0.101 0.533 PB L2
ENSG00000162510 MATN1 -111257 sc-eQTL 7.32e-01 -0.0325 0.0945 0.533 PB L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.16e-01 -0.0835 0.0671 0.533 PB L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 8.66e-01 -0.0157 0.0924 0.533 PB L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 8.97e-02 0.166 0.0971 0.533 PB L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.33e-01 0.0813 0.0679 0.563 Pro_T L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 8.02e-01 0.0218 0.0865 0.563 Pro_T L2
ENSG00000134644 PUM1 -453663 sc-eQTL 3.94e-01 0.0688 0.0806 0.563 Pro_T L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 6.36e-01 0.0275 0.0579 0.563 Pro_T L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 9.80e-01 0.00208 0.0809 0.563 Pro_T L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 4.08e-01 0.0616 0.0743 0.563 Pro_T L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.67e-01 0.0998 0.0897 0.562 Treg L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.01e-01 0.0108 0.087 0.562 Treg L2
ENSG00000134644 PUM1 -453663 sc-eQTL 1.50e-01 -0.1 0.0693 0.562 Treg L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 9.86e-01 -0.00138 0.0798 0.562 Treg L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 5.07e-01 0.054 0.0812 0.562 Treg L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 7.58e-01 0.0251 0.0811 0.562 Treg L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 5.52e-01 0.0535 0.0898 0.556 cDC L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 1.90e-01 -0.127 0.0968 0.556 cDC L2
ENSG00000134644 PUM1 -453663 sc-eQTL 5.99e-01 -0.0439 0.0835 0.556 cDC L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 3.29e-01 -0.0571 0.0584 0.556 cDC L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 6.96e-02 -0.136 0.0745 0.556 cDC L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 7.29e-01 0.0256 0.0739 0.556 cDC L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 3.79e-02 -0.164 0.0786 0.556 cDC L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 8.33e-01 -0.0153 0.0726 0.562 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 5.87e-01 -0.0441 0.0809 0.562 cMono_IL1B L2
ENSG00000134644 PUM1 -453663 sc-eQTL 7.58e-03 -0.145 0.0539 0.562 cMono_IL1B L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 7.60e-01 -0.0147 0.0481 0.562 cMono_IL1B L2
ENSG00000162512 SDC3 -296430 sc-eQTL 3.01e-01 0.0937 0.0904 0.562 cMono_IL1B L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 3.99e-01 -0.0773 0.0915 0.562 cMono_IL1B L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 5.41e-01 0.0495 0.081 0.562 cMono_IL1B L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.45e-01 0.11 0.0752 0.562 cMono_IL1B L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.39e-01 0.09 0.0762 0.562 cMono_S100A L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 3.56e-01 0.0833 0.0901 0.562 cMono_S100A L2
ENSG00000134644 PUM1 -453663 sc-eQTL 1.60e-01 -0.0917 0.065 0.562 cMono_S100A L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 8.51e-01 0.00944 0.0502 0.562 cMono_S100A L2
ENSG00000162512 SDC3 -296430 sc-eQTL 8.12e-01 -0.0206 0.0866 0.562 cMono_S100A L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 4.60e-01 -0.0679 0.0916 0.562 cMono_S100A L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 7.64e-02 -0.132 0.074 0.562 cMono_S100A L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.81e-01 0.0999 0.0745 0.562 cMono_S100A L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 5.28e-02 -0.22 0.113 0.555 gdT L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 7.44e-01 0.0321 0.0981 0.555 gdT L2
ENSG00000134644 PUM1 -453663 sc-eQTL 6.97e-02 -0.183 0.1 0.555 gdT L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 7.13e-01 -0.0406 0.11 0.555 gdT L2
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 4.22e-01 -0.0815 0.101 0.555 gdT L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 2.09e-01 0.123 0.0977 0.555 gdT L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 1.90e-01 -0.11 0.0841 0.571 intMono L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 4.31e-01 0.0715 0.0907 0.571 intMono L2
ENSG00000134644 PUM1 -453663 sc-eQTL 9.21e-01 0.00767 0.077 0.571 intMono L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 9.23e-01 -0.00586 0.0604 0.571 intMono L2
ENSG00000162512 SDC3 -296430 sc-eQTL 9.58e-01 0.00431 0.0828 0.571 intMono L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 7.22e-01 0.0309 0.0866 0.571 intMono L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 9.95e-01 0.000516 0.0821 0.571 intMono L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 9.08e-02 0.139 0.0815 0.571 intMono L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 1.89e-01 -0.105 0.0798 0.561 ncMono L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 6.24e-01 0.0419 0.0854 0.561 ncMono L2
ENSG00000134644 PUM1 -453663 sc-eQTL 8.93e-01 -0.00943 0.0698 0.561 ncMono L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 8.48e-02 -0.109 0.0629 0.561 ncMono L2
ENSG00000162512 SDC3 -296430 sc-eQTL 2.46e-02 0.159 0.0702 0.561 ncMono L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 9.58e-01 -0.00409 0.0776 0.561 ncMono L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 3.90e-01 -0.0666 0.0774 0.561 ncMono L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 3.54e-01 0.0746 0.0802 0.561 ncMono L2
ENSG00000060688 SNRNP40 -684460 sc-eQTL 3.94e-01 0.0806 0.0943 0.562 pDC L2
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 3.90e-01 -0.0891 0.103 0.562 pDC L2
ENSG00000134644 PUM1 -453663 sc-eQTL 8.14e-03 -0.225 0.084 0.562 pDC L2
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.31e-01 -0.0956 0.0796 0.562 pDC L2
ENSG00000168528 SERINC2 -797237 sc-eQTL 7.53e-01 -0.0306 0.0969 0.562 pDC L2
ENSG00000284543 LINC01226 -893898 sc-eQTL 6.90e-01 -0.0301 0.0752 0.562 pDC L2
ENSG00000287510 AL137857.1 -119365 sc-eQTL 1.21e-01 0.137 0.0878 0.562 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.68e-01 -0.0988 0.0889 0.562 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 2.55e-01 0.0846 0.074 0.562 B_Memory LOneK1K
ENSG00000134644 PUM1 -453663 sc-eQTL 1.68e-01 -0.0906 0.0655 0.562 B_Memory LOneK1K
ENSG00000162510 MATN1 -111257 sc-eQTL 4.62e-01 -0.0552 0.0749 0.562 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -145446 sc-eQTL 8.11e-01 0.0113 0.0471 0.562 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 8.58e-01 -0.0112 0.0623 0.562 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -119365 sc-eQTL 2.40e-01 -0.0798 0.0677 0.562 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -684460 sc-eQTL 2.67e-01 -0.0909 0.0817 0.562 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 6.44e-01 0.03 0.0647 0.562 B_Naive LOneK1K
ENSG00000134644 PUM1 -453663 sc-eQTL 9.57e-01 0.00333 0.0613 0.562 B_Naive LOneK1K
ENSG00000162510 MATN1 -111257 sc-eQTL 8.59e-01 -0.0105 0.059 0.562 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -145446 sc-eQTL 7.85e-01 -0.0113 0.0415 0.562 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 8.05e-01 0.0133 0.0536 0.562 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -119365 sc-eQTL 7.29e-01 -0.0221 0.0637 0.562 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -684460 sc-eQTL 6.77e-01 0.029 0.0694 0.562 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 9.68e-01 -0.0032 0.0787 0.562 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -453663 sc-eQTL 5.05e-03 -0.14 0.0493 0.562 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -145446 sc-eQTL 4.45e-01 -0.0337 0.044 0.562 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -296430 sc-eQTL 6.08e-01 0.0463 0.0899 0.562 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -797237 sc-eQTL 4.77e-01 -0.0659 0.0925 0.562 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -893898 sc-eQTL 9.37e-01 -0.00599 0.0759 0.562 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -119365 sc-eQTL 6.39e-02 0.131 0.0705 0.562 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -684460 sc-eQTL 1.08e-01 -0.121 0.0747 0.565 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 6.97e-01 0.0321 0.0823 0.565 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -453663 sc-eQTL 8.11e-01 -0.0161 0.0674 0.565 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -145446 sc-eQTL 1.15e-01 -0.0848 0.0536 0.565 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -296430 sc-eQTL 3.16e-01 0.079 0.0786 0.565 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -797237 sc-eQTL 9.56e-01 0.0045 0.0817 0.565 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -893898 sc-eQTL 6.07e-01 -0.0399 0.0775 0.565 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -119365 sc-eQTL 2.54e-01 0.0886 0.0774 0.565 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -684460 sc-eQTL 6.24e-01 0.0412 0.0839 0.562 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -684654 sc-eQTL 6.20e-01 -0.0284 0.0573 0.562 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -453663 sc-eQTL 4.84e-01 -0.044 0.0627 0.562 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -145446 sc-eQTL 2.33e-01 0.0837 0.07 0.562 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -106176 sc-eQTL 7.07e-01 0.0305 0.081 0.562 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -119365 sc-eQTL 4.54e-01 0.0524 0.0698 0.562 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -684460 eQTL 0.0399 -0.0344 0.0167 0.0 0.0 0.437

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina