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Genes within 1Mb (chr1:30609305:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -687483 sc-eQTL 4.68e-01 -0.0575 0.079 0.391 B L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 9.35e-01 -0.00516 0.0634 0.391 B L1
ENSG00000134644 PUM1 -456686 sc-eQTL 9.05e-01 -0.00632 0.0532 0.391 B L1
ENSG00000162510 MATN1 -114280 sc-eQTL 8.55e-01 0.0102 0.0559 0.391 B L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 8.45e-01 -0.00857 0.0438 0.391 B L1
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 7.19e-01 -0.0185 0.0513 0.391 B L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.97e-01 -0.0514 0.0606 0.391 B L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 8.00e-01 -0.0174 0.0688 0.391 CD4T L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.68e-01 0.0231 0.0537 0.391 CD4T L1
ENSG00000134644 PUM1 -456686 sc-eQTL 6.68e-01 -0.0206 0.0478 0.391 CD4T L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.45e-02 -0.129 0.0523 0.391 CD4T L1
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 8.72e-01 -0.00766 0.0474 0.391 CD4T L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.56e-01 -0.0524 0.0567 0.391 CD4T L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.75e-01 -0.00277 0.0898 0.391 CD8T L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.38e-01 -0.0282 0.0597 0.391 CD8T L1
ENSG00000134644 PUM1 -456686 sc-eQTL 3.19e-01 -0.0525 0.0525 0.391 CD8T L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.89e-01 -0.0671 0.0509 0.391 CD8T L1
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 8.96e-02 0.101 0.0595 0.391 CD8T L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 9.80e-01 -0.00191 0.0752 0.391 CD8T L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.25e-01 0.00738 0.0788 0.39 DC L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.85e-01 0.0378 0.0933 0.39 DC L1
ENSG00000134644 PUM1 -456686 sc-eQTL 8.77e-01 0.0113 0.0731 0.39 DC L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 9.61e-02 -0.0867 0.0518 0.39 DC L1
ENSG00000168528 SERINC2 -800260 sc-eQTL 1.03e-01 -0.14 0.0855 0.39 DC L1
ENSG00000284543 LINC01226 -896921 sc-eQTL 7.08e-01 -0.0214 0.057 0.39 DC L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.38e-02 -0.174 0.0816 0.39 DC L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 5.40e-01 -0.0376 0.0613 0.391 Mono L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 9.74e-01 -0.00244 0.076 0.391 Mono L1
ENSG00000134644 PUM1 -456686 sc-eQTL 1.27e-01 -0.0743 0.0485 0.391 Mono L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 4.57e-02 -0.0892 0.0444 0.391 Mono L1
ENSG00000162512 SDC3 -299453 sc-eQTL 6.34e-01 0.041 0.0861 0.391 Mono L1
ENSG00000168528 SERINC2 -800260 sc-eQTL 6.69e-02 -0.169 0.0917 0.391 Mono L1
ENSG00000284543 LINC01226 -896921 sc-eQTL 3.74e-01 -0.0724 0.0813 0.391 Mono L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.82e-01 0.0501 0.0711 0.391 Mono L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 4.10e-01 -0.0725 0.0879 0.393 NK L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.02e-01 -0.0151 0.0602 0.393 NK L1
ENSG00000134644 PUM1 -456686 sc-eQTL 9.96e-01 0.00031 0.0632 0.393 NK L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.49e-01 -0.0331 0.0727 0.393 NK L1
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 7.18e-01 -0.0295 0.0817 0.393 NK L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.20e-01 -0.0925 0.0752 0.393 NK L1
ENSG00000060688 SNRNP40 -687483 sc-eQTL 2.19e-01 0.0791 0.0642 0.391 Other_T L1
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 5.97e-01 0.0364 0.0688 0.391 Other_T L1
ENSG00000134644 PUM1 -456686 sc-eQTL 8.82e-01 -0.00922 0.0619 0.391 Other_T L1
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.46e-01 -0.0736 0.0505 0.391 Other_T L1
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 9.26e-01 0.00771 0.0831 0.391 Other_T L1
ENSG00000287510 AL137857.1 -122388 sc-eQTL 7.39e-01 0.0289 0.0866 0.391 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -687483 sc-eQTL 6.98e-01 -0.0405 0.104 0.395 B_Activated L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 9.22e-01 0.0103 0.105 0.395 B_Activated L2
ENSG00000134644 PUM1 -456686 sc-eQTL 7.56e-01 -0.0304 0.0978 0.395 B_Activated L2
ENSG00000162510 MATN1 -114280 sc-eQTL 3.73e-01 -0.0763 0.0853 0.395 B_Activated L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.26e-01 0.0379 0.0596 0.395 B_Activated L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 3.74e-01 -0.0856 0.096 0.395 B_Activated L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.00e-01 0.0882 0.0849 0.395 B_Activated L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.50e-01 0.00603 0.0966 0.388 B_Intermediate L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.31e-01 -0.0387 0.0804 0.388 B_Intermediate L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.30e-01 -0.00671 0.0759 0.388 B_Intermediate L2
ENSG00000162510 MATN1 -114280 sc-eQTL 3.41e-01 0.0753 0.0788 0.388 B_Intermediate L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.46e-01 -0.0704 0.0483 0.388 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 8.80e-01 -0.0103 0.0681 0.388 B_Intermediate L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 9.21e-02 -0.128 0.0757 0.388 B_Intermediate L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 8.42e-01 0.0189 0.0947 0.39 B_Memory L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 5.60e-01 0.0509 0.0871 0.39 B_Memory L2
ENSG00000134644 PUM1 -456686 sc-eQTL 2.68e-01 -0.084 0.0757 0.39 B_Memory L2
ENSG00000162510 MATN1 -114280 sc-eQTL 1.88e-01 -0.0955 0.0723 0.39 B_Memory L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 3.29e-01 -0.0628 0.0642 0.39 B_Memory L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 9.21e-01 -0.00731 0.0736 0.39 B_Memory L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.76e-01 0.0764 0.0861 0.39 B_Memory L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 1.71e-01 -0.116 0.0848 0.391 B_Naive1 L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.51e-01 0.0333 0.0736 0.391 B_Naive1 L2
ENSG00000134644 PUM1 -456686 sc-eQTL 3.24e-01 0.0641 0.0648 0.391 B_Naive1 L2
ENSG00000162510 MATN1 -114280 sc-eQTL 9.51e-01 -0.00405 0.0659 0.391 B_Naive1 L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.92e-01 -0.0573 0.0438 0.391 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 8.54e-01 -0.0106 0.0578 0.391 B_Naive1 L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.67e-01 -0.0519 0.0713 0.391 B_Naive1 L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 6.30e-01 0.0442 0.0916 0.391 B_Naive2 L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.92e-01 0.03 0.0756 0.391 B_Naive2 L2
ENSG00000134644 PUM1 -456686 sc-eQTL 2.89e-01 -0.0784 0.0739 0.391 B_Naive2 L2
ENSG00000162510 MATN1 -114280 sc-eQTL 3.13e-01 0.0717 0.0709 0.391 B_Naive2 L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 2.79e-01 -0.0523 0.0481 0.391 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 4.81e-01 -0.0496 0.0702 0.391 B_Naive2 L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.47e-01 -0.0714 0.0758 0.391 B_Naive2 L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.87e-01 0.00155 0.0914 0.389 CD4_CTL L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 7.61e-01 -0.0274 0.0899 0.389 CD4_CTL L2
ENSG00000134644 PUM1 -456686 sc-eQTL 5.42e-02 -0.169 0.0874 0.389 CD4_CTL L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 9.17e-01 0.0082 0.0786 0.389 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 3.24e-01 0.0847 0.0858 0.389 CD4_CTL L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.22e-01 -0.0926 0.0756 0.389 CD4_CTL L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.13e-01 -0.072 0.0711 0.391 CD4_Naive L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 7.80e-01 -0.0177 0.0632 0.391 CD4_Naive L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.44e-01 -0.00354 0.0505 0.391 CD4_Naive L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.51e-02 -0.131 0.0533 0.391 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 7.15e-01 0.0201 0.0548 0.391 CD4_Naive L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 6.39e-01 -0.0296 0.063 0.391 CD4_Naive L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 1.48e-01 0.13 0.0898 0.391 CD4_TCM L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 3.61e-02 0.152 0.072 0.391 CD4_TCM L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.37e-01 -0.00506 0.0644 0.391 CD4_TCM L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.03e-02 -0.136 0.0526 0.391 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 1.71e-01 -0.0927 0.0675 0.391 CD4_TCM L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 6.36e-01 -0.0357 0.0755 0.391 CD4_TCM L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 7.47e-01 0.0289 0.0894 0.391 CD4_TEM L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 2.61e-01 -0.0958 0.085 0.391 CD4_TEM L2
ENSG00000134644 PUM1 -456686 sc-eQTL 5.66e-01 -0.0408 0.071 0.391 CD4_TEM L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.24e-01 -0.0352 0.0718 0.391 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 6.60e-01 -0.037 0.084 0.391 CD4_TEM L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.00e-01 -0.106 0.0825 0.391 CD4_TEM L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.05e-01 0.0115 0.0965 0.391 CD8_CTL L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 5.73e-01 -0.0417 0.0739 0.391 CD8_CTL L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.13e-01 -0.00783 0.0719 0.391 CD8_CTL L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 3.37e-01 -0.0764 0.0794 0.391 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 2.83e-01 0.0897 0.0834 0.391 CD8_CTL L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 1.74e-01 0.107 0.0783 0.391 CD8_CTL L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 5.18e-01 -0.0581 0.0898 0.391 CD8_Naive L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.97e-01 0.0302 0.0774 0.391 CD8_Naive L2
ENSG00000134644 PUM1 -456686 sc-eQTL 6.99e-02 -0.113 0.0619 0.391 CD8_Naive L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.47e-02 -0.145 0.0589 0.391 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 2.61e-01 0.0838 0.0744 0.391 CD8_Naive L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.51e-01 -0.0758 0.081 0.391 CD8_Naive L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 6.02e-01 0.0518 0.0993 0.391 CD8_TCM L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 1.66e-01 0.126 0.0906 0.391 CD8_TCM L2
ENSG00000134644 PUM1 -456686 sc-eQTL 2.26e-01 0.104 0.0853 0.391 CD8_TCM L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.36e-01 -0.0425 0.0896 0.391 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 1.97e-01 0.107 0.0826 0.391 CD8_TCM L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 1.11e-01 0.133 0.0833 0.391 CD8_TCM L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 7.40e-01 0.0313 0.0941 0.388 CD8_TEM L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 3.72e-01 -0.0805 0.09 0.388 CD8_TEM L2
ENSG00000134644 PUM1 -456686 sc-eQTL 5.28e-01 -0.0582 0.0921 0.388 CD8_TEM L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.77e-01 0.0483 0.0866 0.388 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 6.23e-01 -0.0443 0.0899 0.388 CD8_TEM L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.05e-01 0.0678 0.0813 0.388 CD8_TEM L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 1.65e-01 0.131 0.0943 0.387 MAIT L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 3.43e-01 -0.0796 0.0838 0.387 MAIT L2
ENSG00000134644 PUM1 -456686 sc-eQTL 1.62e-01 0.112 0.0801 0.387 MAIT L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.56e-02 -0.145 0.0752 0.387 MAIT L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 6.60e-01 0.0372 0.0845 0.387 MAIT L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.95e-01 0.0595 0.087 0.387 MAIT L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.22e-01 -0.0967 0.0973 0.384 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.92e-01 -0.0327 0.0824 0.384 NK_CD56bright L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.16e-01 0.0092 0.0866 0.384 NK_CD56bright L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.91e-01 -0.034 0.0854 0.384 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 1.65e-01 0.119 0.0854 0.384 NK_CD56bright L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.61e-01 -0.0624 0.0844 0.384 NK_CD56bright L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 5.54e-01 -0.0551 0.0931 0.392 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 2.37e-01 0.0815 0.0687 0.392 NK_CD56dim L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.08e-01 0.00821 0.0707 0.392 NK_CD56dim L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 9.84e-01 -0.00153 0.0754 0.392 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 6.90e-01 -0.0377 0.0944 0.392 NK_CD56dim L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 1.74e-01 -0.106 0.0776 0.392 NK_CD56dim L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 1.95e-01 0.126 0.0964 0.388 NK_HLA L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.83e-01 -0.0128 0.0865 0.388 NK_HLA L2
ENSG00000134644 PUM1 -456686 sc-eQTL 3.22e-01 -0.0835 0.0841 0.388 NK_HLA L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.36e-01 -0.0499 0.0804 0.388 NK_HLA L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 8.16e-01 -0.02 0.0856 0.388 NK_HLA L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 7.62e-01 0.0251 0.0827 0.388 NK_HLA L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 4.76e-01 -0.064 0.0896 0.392 NK_cytokine L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 2.35e-01 -0.083 0.0698 0.392 NK_cytokine L2
ENSG00000134644 PUM1 -456686 sc-eQTL 8.10e-01 -0.0182 0.0757 0.392 NK_cytokine L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.12e-01 -0.0547 0.0832 0.392 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 9.47e-01 0.00589 0.0883 0.392 NK_cytokine L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 8.23e-01 -0.0184 0.0821 0.392 NK_cytokine L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.71e-01 -0.098 0.109 0.37 PB L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 1.94e-01 0.165 0.126 0.37 PB L2
ENSG00000134644 PUM1 -456686 sc-eQTL 7.49e-01 0.0355 0.11 0.37 PB L2
ENSG00000162510 MATN1 -114280 sc-eQTL 7.33e-01 0.0352 0.103 0.37 PB L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 9.52e-01 -0.0044 0.0735 0.37 PB L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 5.65e-01 -0.058 0.101 0.37 PB L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.45e-02 0.214 0.105 0.37 PB L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.63e-01 0.0034 0.0725 0.391 Pro_T L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.71e-01 -0.0149 0.092 0.391 Pro_T L2
ENSG00000134644 PUM1 -456686 sc-eQTL 7.17e-01 0.0312 0.0858 0.391 Pro_T L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.08e-01 0.0316 0.0616 0.391 Pro_T L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 7.01e-01 -0.0331 0.086 0.391 Pro_T L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 7.95e-01 0.0206 0.0792 0.391 Pro_T L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 9.11e-02 0.156 0.0919 0.391 Treg L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.56e-01 -0.0163 0.0895 0.391 Treg L2
ENSG00000134644 PUM1 -456686 sc-eQTL 6.10e-01 -0.0366 0.0716 0.391 Treg L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 4.76e-02 -0.162 0.0813 0.391 Treg L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 6.59e-01 0.0369 0.0835 0.391 Treg L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 8.33e-01 -0.0176 0.0835 0.391 Treg L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 8.16e-01 -0.0217 0.0932 0.383 cDC L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 4.10e-01 -0.0832 0.101 0.383 cDC L2
ENSG00000134644 PUM1 -456686 sc-eQTL 6.87e-01 -0.0349 0.0866 0.383 cDC L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.85e-01 -0.0804 0.0604 0.383 cDC L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 4.51e-02 -0.156 0.0771 0.383 cDC L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 9.26e-01 0.00714 0.0766 0.383 cDC L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.90e-01 -0.0873 0.0822 0.383 cDC L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.81e-01 -0.0649 0.0739 0.391 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 9.52e-01 -0.00503 0.0826 0.391 cMono_IL1B L2
ENSG00000134644 PUM1 -456686 sc-eQTL 1.57e-01 -0.0789 0.0556 0.391 cMono_IL1B L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 2.14e-01 -0.0609 0.0489 0.391 cMono_IL1B L2
ENSG00000162512 SDC3 -299453 sc-eQTL 2.59e-01 0.104 0.0921 0.391 cMono_IL1B L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 4.59e-02 -0.186 0.0927 0.391 cMono_IL1B L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 6.14e-01 0.0417 0.0826 0.391 cMono_IL1B L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 6.22e-01 0.038 0.0771 0.391 cMono_IL1B L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 7.89e-01 0.0209 0.0781 0.391 cMono_S100A L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.25e-01 0.0204 0.0923 0.391 cMono_S100A L2
ENSG00000134644 PUM1 -456686 sc-eQTL 6.69e-01 -0.0286 0.0667 0.391 cMono_S100A L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.18e-01 -0.0332 0.0512 0.391 cMono_S100A L2
ENSG00000162512 SDC3 -299453 sc-eQTL 4.91e-01 -0.0611 0.0885 0.391 cMono_S100A L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 2.31e-02 -0.212 0.0926 0.391 cMono_S100A L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 1.00e-01 -0.125 0.0757 0.391 cMono_S100A L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.02e-01 0.0789 0.0763 0.391 cMono_S100A L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 5.04e-01 -0.0767 0.114 0.397 gdT L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.89e-01 0.0138 0.0984 0.397 gdT L2
ENSG00000134644 PUM1 -456686 sc-eQTL 6.53e-03 -0.273 0.0988 0.397 gdT L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 6.14e-01 -0.0557 0.11 0.397 gdT L2
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 5.34e-01 -0.0634 0.102 0.397 gdT L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.52e-01 0.0742 0.0984 0.397 gdT L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 1.20e-01 -0.137 0.0879 0.398 intMono L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 3.87e-01 0.0823 0.0949 0.398 intMono L2
ENSG00000134644 PUM1 -456686 sc-eQTL 1.48e-01 0.116 0.0803 0.398 intMono L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 5.70e-01 -0.0359 0.0632 0.398 intMono L2
ENSG00000162512 SDC3 -299453 sc-eQTL 8.07e-01 -0.0212 0.0867 0.398 intMono L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 9.57e-01 0.00488 0.0907 0.398 intMono L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 4.69e-01 -0.0623 0.0859 0.398 intMono L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 5.26e-01 0.0545 0.0859 0.398 intMono L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 7.17e-01 -0.0295 0.0814 0.387 ncMono L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.09e-01 0.0444 0.0868 0.387 ncMono L2
ENSG00000134644 PUM1 -456686 sc-eQTL 9.72e-01 -0.00249 0.0709 0.387 ncMono L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 8.53e-02 -0.111 0.0639 0.387 ncMono L2
ENSG00000162512 SDC3 -299453 sc-eQTL 7.95e-01 0.0188 0.0722 0.387 ncMono L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 9.81e-01 -0.00189 0.0788 0.387 ncMono L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 7.04e-01 -0.03 0.0787 0.387 ncMono L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 5.48e-01 -0.0491 0.0816 0.387 ncMono L2
ENSG00000060688 SNRNP40 -687483 sc-eQTL 8.11e-01 0.0224 0.0937 0.39 pDC L2
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.94e-01 -0.0137 0.103 0.39 pDC L2
ENSG00000134644 PUM1 -456686 sc-eQTL 1.94e-01 -0.111 0.0848 0.39 pDC L2
ENSG00000162511 LAPTM5 -148469 sc-eQTL 4.90e-01 -0.0547 0.0791 0.39 pDC L2
ENSG00000168528 SERINC2 -800260 sc-eQTL 7.42e-01 -0.0316 0.0961 0.39 pDC L2
ENSG00000284543 LINC01226 -896921 sc-eQTL 5.08e-01 0.0494 0.0745 0.39 pDC L2
ENSG00000287510 AL137857.1 -122388 sc-eQTL 8.25e-01 0.0195 0.0878 0.39 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.76e-01 -0.0815 0.092 0.391 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.59e-01 -0.0137 0.0767 0.391 B_Memory LOneK1K
ENSG00000134644 PUM1 -456686 sc-eQTL 3.43e-01 -0.0644 0.0678 0.391 B_Memory LOneK1K
ENSG00000162510 MATN1 -114280 sc-eQTL 8.17e-01 0.018 0.0775 0.391 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -148469 sc-eQTL 4.25e-01 -0.0389 0.0486 0.391 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 9.47e-01 -0.00431 0.0644 0.391 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.96e-01 -0.0733 0.07 0.391 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -687483 sc-eQTL 5.73e-01 -0.047 0.0833 0.391 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 8.54e-01 0.0122 0.0659 0.391 B_Naive LOneK1K
ENSG00000134644 PUM1 -456686 sc-eQTL 6.18e-01 -0.0312 0.0623 0.391 B_Naive LOneK1K
ENSG00000162510 MATN1 -114280 sc-eQTL 8.30e-01 0.0129 0.06 0.391 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.22e-01 -0.0652 0.042 0.391 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 9.82e-01 0.00123 0.0546 0.391 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -122388 sc-eQTL 4.10e-01 -0.0534 0.0647 0.391 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -687483 sc-eQTL 7.10e-01 -0.0262 0.0704 0.391 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.77e-01 -0.0333 0.0798 0.391 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -456686 sc-eQTL 1.46e-01 -0.0739 0.0507 0.391 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -148469 sc-eQTL 1.15e-01 -0.0705 0.0445 0.391 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -299453 sc-eQTL 5.90e-01 0.0492 0.0912 0.391 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -800260 sc-eQTL 4.81e-02 -0.185 0.093 0.391 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -896921 sc-eQTL 8.00e-01 -0.0196 0.077 0.391 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -122388 sc-eQTL 3.65e-01 0.0653 0.0719 0.391 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -687483 sc-eQTL 3.02e-01 -0.08 0.0773 0.394 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 1.82e-01 0.113 0.0844 0.394 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -456686 sc-eQTL 4.59e-01 0.0515 0.0694 0.394 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -148469 sc-eQTL 3.99e-02 -0.114 0.055 0.394 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -299453 sc-eQTL 7.41e-01 0.0269 0.0811 0.394 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -800260 sc-eQTL 7.65e-01 -0.0252 0.0841 0.394 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -896921 sc-eQTL 4.58e-01 -0.0593 0.0798 0.394 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -122388 sc-eQTL 8.33e-01 -0.0169 0.08 0.394 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -687483 sc-eQTL 4.29e-01 -0.0703 0.0887 0.392 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -687677 sc-eQTL 6.85e-01 -0.0246 0.0607 0.392 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -456686 sc-eQTL 7.43e-01 -0.0218 0.0665 0.392 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -148469 sc-eQTL 8.20e-01 -0.017 0.0743 0.392 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -109199 sc-eQTL 7.73e-01 -0.0247 0.0857 0.392 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -122388 sc-eQTL 2.59e-01 -0.0834 0.0737 0.392 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -687483 eQTL 0.0293 -0.0375 0.0172 0.00107 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina