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Genes within 1Mb (chr1:30608064:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.55e-01 0.0827 0.0891 0.263 B L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.29e-01 -0.0346 0.0715 0.263 B L1
ENSG00000134644 PUM1 -457927 sc-eQTL 6.97e-01 -0.0234 0.06 0.263 B L1
ENSG00000162510 MATN1 -115521 sc-eQTL 6.45e-02 0.116 0.0626 0.263 B L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.30e-01 0.0593 0.0492 0.263 B L1
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 3.15e-01 0.0582 0.0578 0.263 B L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.46e-01 0.0994 0.0682 0.263 B L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 2.17e-01 -0.0944 0.0762 0.263 CD4T L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.65e-01 -0.0344 0.0597 0.263 CD4T L1
ENSG00000134644 PUM1 -457927 sc-eQTL 2.80e-01 0.0574 0.053 0.263 CD4T L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.09e-01 0.0739 0.0587 0.263 CD4T L1
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 9.77e-01 -0.00152 0.0527 0.263 CD4T L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.86e-01 -0.0547 0.063 0.263 CD4T L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 6.31e-01 0.0479 0.0995 0.263 CD8T L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.28e-01 0.0321 0.0662 0.263 CD8T L1
ENSG00000134644 PUM1 -457927 sc-eQTL 1.60e-01 0.0819 0.0581 0.263 CD8T L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.82e-01 0.0755 0.0564 0.263 CD8T L1
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 5.92e-01 -0.0356 0.0663 0.263 CD8T L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.01e-01 -0.0864 0.0832 0.263 CD8T L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.55e-01 -0.0837 0.0902 0.266 DC L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 2.24e-01 -0.13 0.107 0.266 DC L1
ENSG00000134644 PUM1 -457927 sc-eQTL 2.59e-01 -0.0945 0.0835 0.266 DC L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.62e-01 0.0672 0.0597 0.266 DC L1
ENSG00000168528 SERINC2 -801501 sc-eQTL 4.26e-01 0.0786 0.0985 0.266 DC L1
ENSG00000284543 LINC01226 -898162 sc-eQTL 9.54e-01 0.00374 0.0654 0.266 DC L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.35e-01 0.141 0.0941 0.266 DC L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.94e-01 -0.037 0.0695 0.263 Mono L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 7.37e-01 0.029 0.0862 0.263 Mono L1
ENSG00000134644 PUM1 -457927 sc-eQTL 4.51e-01 0.0416 0.0552 0.263 Mono L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 6.27e-02 0.0943 0.0504 0.263 Mono L1
ENSG00000162512 SDC3 -300694 sc-eQTL 3.62e-01 -0.0891 0.0975 0.263 Mono L1
ENSG00000168528 SERINC2 -801501 sc-eQTL 4.09e-01 -0.0866 0.105 0.263 Mono L1
ENSG00000284543 LINC01226 -898162 sc-eQTL 8.05e-01 -0.0228 0.0923 0.263 Mono L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.56e-01 -0.114 0.0803 0.263 Mono L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.68e-01 -0.0872 0.0966 0.264 NK L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 4.89e-01 0.0458 0.0662 0.264 NK L1
ENSG00000134644 PUM1 -457927 sc-eQTL 4.81e-01 0.049 0.0694 0.264 NK L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 8.88e-01 -0.0113 0.08 0.264 NK L1
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.23e-01 -0.11 0.0896 0.264 NK L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.87e-01 -0.0451 0.083 0.264 NK L1
ENSG00000060688 SNRNP40 -688724 sc-eQTL 9.44e-01 0.00514 0.0726 0.263 Other_T L1
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.68e-01 0.00316 0.0776 0.263 Other_T L1
ENSG00000134644 PUM1 -457927 sc-eQTL 4.99e-01 0.0472 0.0697 0.263 Other_T L1
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.10e-02 0.116 0.0566 0.263 Other_T L1
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.85e-01 0.1 0.0933 0.263 Other_T L1
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.33e-01 -0.146 0.097 0.263 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.78e-01 0.0639 0.115 0.258 B_Activated L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.07e-01 -0.0136 0.116 0.258 B_Activated L2
ENSG00000134644 PUM1 -457927 sc-eQTL 6.68e-01 -0.0463 0.108 0.258 B_Activated L2
ENSG00000162510 MATN1 -115521 sc-eQTL 8.19e-01 0.0216 0.0941 0.258 B_Activated L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 6.55e-01 0.0294 0.0656 0.258 B_Activated L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 9.96e-01 0.000494 0.106 0.258 B_Activated L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 7.62e-01 -0.0284 0.0938 0.258 B_Activated L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 6.63e-01 -0.0484 0.111 0.264 B_Intermediate L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.54e-01 -0.00538 0.0925 0.264 B_Intermediate L2
ENSG00000134644 PUM1 -457927 sc-eQTL 2.91e-01 0.0922 0.087 0.264 B_Intermediate L2
ENSG00000162510 MATN1 -115521 sc-eQTL 4.25e-01 0.0725 0.0907 0.264 B_Intermediate L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.41e-01 0.082 0.0555 0.264 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.71e-01 0.0861 0.078 0.264 B_Intermediate L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 2.12e-02 0.201 0.0865 0.264 B_Intermediate L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.59e-01 0.0981 0.107 0.265 B_Memory L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 8.99e-02 -0.167 0.0978 0.265 B_Memory L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.52e-01 0.00521 0.0857 0.265 B_Memory L2
ENSG00000162510 MATN1 -115521 sc-eQTL 4.04e-01 0.0684 0.0818 0.265 B_Memory L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.12e-01 0.0596 0.0725 0.265 B_Memory L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 7.27e-01 0.0291 0.0831 0.265 B_Memory L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.47e-01 0.141 0.0969 0.265 B_Memory L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 2.58e-01 0.109 0.0964 0.263 B_Naive1 L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 8.00e-01 -0.0212 0.0835 0.263 B_Naive1 L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.44e-02 -0.127 0.0731 0.263 B_Naive1 L2
ENSG00000162510 MATN1 -115521 sc-eQTL 5.35e-02 0.144 0.074 0.263 B_Naive1 L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 3.46e-01 0.047 0.0498 0.263 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 4.40e-01 0.0506 0.0655 0.263 B_Naive1 L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.70e-01 0.046 0.0809 0.263 B_Naive1 L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 4.30e-01 -0.0822 0.104 0.264 B_Naive2 L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 4.13e-01 0.0704 0.0858 0.264 B_Naive2 L2
ENSG00000134644 PUM1 -457927 sc-eQTL 4.24e-01 0.0673 0.084 0.264 B_Naive2 L2
ENSG00000162510 MATN1 -115521 sc-eQTL 3.82e-01 0.0706 0.0806 0.264 B_Naive2 L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 5.93e-01 0.0293 0.0548 0.264 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 8.91e-01 -0.0109 0.0798 0.264 B_Naive2 L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.57e-01 0.0507 0.0862 0.264 B_Naive2 L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 2.58e-01 -0.116 0.102 0.264 CD4_CTL L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 2.69e-01 -0.111 0.101 0.264 CD4_CTL L2
ENSG00000134644 PUM1 -457927 sc-eQTL 7.22e-02 0.177 0.0981 0.264 CD4_CTL L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.91e-01 -0.0607 0.088 0.264 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 8.30e-01 0.0208 0.0964 0.264 CD4_CTL L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 9.55e-02 0.142 0.0845 0.264 CD4_CTL L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 4.83e-01 0.0557 0.0793 0.263 CD4_Naive L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.99e-01 -0.0371 0.0704 0.263 CD4_Naive L2
ENSG00000134644 PUM1 -457927 sc-eQTL 5.97e-01 0.0298 0.0562 0.263 CD4_Naive L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 8.43e-02 0.104 0.0598 0.263 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 6.93e-01 -0.0242 0.0611 0.263 CD4_Naive L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 7.37e-02 -0.125 0.0697 0.263 CD4_Naive L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 1.67e-03 -0.311 0.0978 0.263 CD4_TCM L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 7.99e-01 -0.0206 0.0807 0.263 CD4_TCM L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.12e-01 0.017 0.0715 0.263 CD4_TCM L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.29e-01 0.0712 0.0591 0.263 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 4.13e-01 0.0616 0.0751 0.263 CD4_TCM L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 6.98e-01 0.0325 0.0838 0.263 CD4_TCM L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.58e-01 -0.0591 0.101 0.263 CD4_TEM L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 2.71e-01 0.106 0.0957 0.263 CD4_TEM L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.68e-01 -0.0133 0.08 0.263 CD4_TEM L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 5.20e-01 -0.0521 0.0808 0.263 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 7.96e-01 0.0245 0.0946 0.263 CD4_TEM L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.70e-01 0.128 0.0928 0.263 CD4_TEM L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 8.21e-01 -0.0247 0.109 0.263 CD8_CTL L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 8.79e-01 -0.0128 0.0835 0.263 CD8_CTL L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.12e-01 0.0193 0.0811 0.263 CD8_CTL L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.92e-01 0.0946 0.0896 0.263 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 4.49e-02 -0.189 0.0935 0.263 CD8_CTL L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 4.79e-01 -0.0629 0.0887 0.263 CD8_CTL L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 6.50e-02 0.186 0.1 0.263 CD8_Naive L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 3.01e-01 0.09 0.0868 0.263 CD8_Naive L2
ENSG00000134644 PUM1 -457927 sc-eQTL 2.38e-02 0.158 0.0692 0.263 CD8_Naive L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.57e-01 0.0948 0.0668 0.263 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 4.35e-01 -0.0654 0.0836 0.263 CD8_Naive L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 4.38e-01 -0.0708 0.0911 0.263 CD8_Naive L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 8.00e-02 -0.2 0.113 0.262 CD8_TCM L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 7.70e-01 -0.0307 0.105 0.262 CD8_TCM L2
ENSG00000134644 PUM1 -457927 sc-eQTL 2.33e-01 -0.117 0.0982 0.262 CD8_TCM L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 7.61e-01 0.0314 0.103 0.262 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 7.57e-01 -0.0295 0.0954 0.262 CD8_TCM L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 4.38e-01 -0.0749 0.0963 0.262 CD8_TCM L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 8.13e-01 0.0251 0.106 0.265 CD8_TEM L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 4.76e-01 -0.0723 0.101 0.265 CD8_TEM L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.19e-01 0.0105 0.104 0.265 CD8_TEM L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.24e-01 -0.0778 0.0972 0.265 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 6.48e-01 0.0462 0.101 0.265 CD8_TEM L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.75e-01 0.0811 0.0913 0.265 CD8_TEM L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 4.61e-01 -0.0791 0.107 0.264 MAIT L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.34e-01 -0.0453 0.0949 0.264 MAIT L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.28e-01 0.0198 0.091 0.264 MAIT L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.56e-01 0.122 0.0855 0.264 MAIT L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 5.00e-01 0.0646 0.0955 0.264 MAIT L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.43e-01 -0.0934 0.0984 0.264 MAIT L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 6.96e-01 -0.0431 0.11 0.267 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 4.13e-02 0.189 0.0921 0.267 NK_CD56bright L2
ENSG00000134644 PUM1 -457927 sc-eQTL 7.68e-01 -0.0288 0.0978 0.267 NK_CD56bright L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.63e-01 -0.134 0.096 0.267 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.60e-01 -0.109 0.0966 0.267 NK_CD56bright L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.48e-01 -0.0575 0.0954 0.267 NK_CD56bright L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 1.78e-01 -0.138 0.102 0.263 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.74e-01 -0.032 0.0759 0.263 NK_CD56dim L2
ENSG00000134644 PUM1 -457927 sc-eQTL 1.82e-01 0.104 0.0776 0.263 NK_CD56dim L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 8.37e-01 0.0171 0.0831 0.263 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.34e-01 -0.124 0.104 0.263 NK_CD56dim L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 9.67e-01 0.00356 0.0859 0.263 NK_CD56dim L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 7.10e-01 0.0409 0.11 0.263 NK_HLA L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 3.65e-02 -0.205 0.0973 0.263 NK_HLA L2
ENSG00000134644 PUM1 -457927 sc-eQTL 6.59e-01 0.0424 0.0958 0.263 NK_HLA L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 6.58e-01 -0.0406 0.0914 0.263 NK_HLA L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 9.30e-01 0.00861 0.0973 0.263 NK_HLA L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 2.03e-02 -0.217 0.0928 0.263 NK_HLA L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 7.81e-01 -0.028 0.101 0.263 NK_cytokine L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.74e-02 0.149 0.0778 0.263 NK_cytokine L2
ENSG00000134644 PUM1 -457927 sc-eQTL 8.66e-01 0.0144 0.0848 0.263 NK_cytokine L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 9.60e-01 0.00468 0.0934 0.263 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 6.37e-01 -0.0468 0.0989 0.263 NK_cytokine L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 7.70e-01 -0.027 0.0921 0.263 NK_cytokine L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 7.53e-01 -0.0363 0.115 0.293 PB L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.25e-02 -0.223 0.131 0.293 PB L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.12e-01 0.0129 0.116 0.293 PB L2
ENSG00000162510 MATN1 -115521 sc-eQTL 5.82e-01 0.0594 0.108 0.293 PB L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.92e-01 0.0812 0.0767 0.293 PB L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 5.58e-01 0.0619 0.105 0.293 PB L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 7.00e-01 -0.0434 0.112 0.293 PB L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.24e-01 -0.0504 0.079 0.263 Pro_T L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 3.14e-01 -0.101 0.1 0.263 Pro_T L2
ENSG00000134644 PUM1 -457927 sc-eQTL 5.88e-01 -0.0509 0.0936 0.263 Pro_T L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 9.44e-01 0.00473 0.0672 0.263 Pro_T L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 5.83e-01 0.0516 0.0939 0.263 Pro_T L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 2.82e-01 -0.0929 0.0862 0.263 Pro_T L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 2.23e-01 -0.128 0.105 0.263 Treg L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.43e-01 -0.00728 0.102 0.263 Treg L2
ENSG00000134644 PUM1 -457927 sc-eQTL 1.65e-02 0.194 0.0804 0.263 Treg L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 9.07e-01 0.0109 0.0934 0.263 Treg L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 2.55e-01 -0.108 0.0948 0.263 Treg L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 2.01e-01 0.121 0.0946 0.263 Treg L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 7.16e-01 0.038 0.104 0.266 cDC L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.66e-01 0.00488 0.113 0.266 cDC L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.64e-01 0.00438 0.0969 0.266 cDC L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 5.09e-01 0.0449 0.0678 0.266 cDC L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 2.80e-01 0.0941 0.0869 0.266 cDC L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 9.37e-02 -0.143 0.085 0.266 cDC L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.30e-01 0.139 0.0916 0.266 cDC L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.41e-01 -0.0794 0.0832 0.263 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.35e-01 0.0577 0.093 0.263 cMono_IL1B L2
ENSG00000134644 PUM1 -457927 sc-eQTL 1.32e-01 0.0947 0.0626 0.263 cMono_IL1B L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.04e-01 0.0702 0.0551 0.263 cMono_IL1B L2
ENSG00000162512 SDC3 -300694 sc-eQTL 6.41e-01 -0.0486 0.104 0.263 cMono_IL1B L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 3.86e-01 -0.0913 0.105 0.263 cMono_IL1B L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 6.53e-01 -0.0419 0.0931 0.263 cMono_IL1B L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.68e-01 -0.0783 0.0867 0.263 cMono_IL1B L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 6.98e-01 -0.0341 0.0878 0.263 cMono_S100A L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.57e-01 -0.00566 0.104 0.263 cMono_S100A L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.37e-01 0.0059 0.075 0.263 cMono_S100A L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 3.16e-01 0.0578 0.0575 0.263 cMono_S100A L2
ENSG00000162512 SDC3 -300694 sc-eQTL 5.88e-01 -0.054 0.0995 0.263 cMono_S100A L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 7.61e-01 -0.0321 0.105 0.263 cMono_S100A L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 2.38e-01 0.101 0.0853 0.263 cMono_S100A L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 8.21e-02 -0.149 0.0854 0.263 cMono_S100A L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.28e-01 0.0866 0.137 0.279 gdT L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 3.25e-01 0.116 0.117 0.279 gdT L2
ENSG00000134644 PUM1 -457927 sc-eQTL 1.47e-01 0.175 0.12 0.279 gdT L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 9.28e-01 0.0119 0.132 0.279 gdT L2
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 8.67e-01 -0.0204 0.122 0.279 gdT L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 2.20e-01 -0.145 0.117 0.279 gdT L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 7.54e-01 0.0311 0.099 0.262 intMono L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 8.96e-01 -0.0139 0.106 0.262 intMono L2
ENSG00000134644 PUM1 -457927 sc-eQTL 2.57e-01 -0.102 0.0901 0.262 intMono L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.66e-01 0.0517 0.0708 0.262 intMono L2
ENSG00000162512 SDC3 -300694 sc-eQTL 9.91e-01 -0.00109 0.0971 0.262 intMono L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 9.79e-01 -0.00273 0.102 0.262 intMono L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 8.07e-01 -0.0236 0.0963 0.262 intMono L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.65e-02 -0.183 0.0954 0.262 intMono L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 9.42e-01 0.00672 0.0922 0.265 ncMono L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.32e-01 0.00844 0.0983 0.265 ncMono L2
ENSG00000134644 PUM1 -457927 sc-eQTL 7.48e-01 -0.0258 0.0803 0.265 ncMono L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 2.61e-01 0.0821 0.0727 0.265 ncMono L2
ENSG00000162512 SDC3 -300694 sc-eQTL 1.93e-02 -0.19 0.0807 0.265 ncMono L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 9.26e-01 -0.00835 0.0893 0.265 ncMono L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 7.63e-01 0.027 0.0892 0.265 ncMono L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 8.63e-01 0.0159 0.0925 0.265 ncMono L2
ENSG00000060688 SNRNP40 -688724 sc-eQTL 1.29e-01 -0.158 0.104 0.26 pDC L2
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.96e-01 0.0448 0.114 0.26 pDC L2
ENSG00000134644 PUM1 -457927 sc-eQTL 9.54e-01 -0.00551 0.0949 0.26 pDC L2
ENSG00000162511 LAPTM5 -149710 sc-eQTL 6.55e-01 0.0395 0.0882 0.26 pDC L2
ENSG00000168528 SERINC2 -801501 sc-eQTL 5.77e-01 -0.0597 0.107 0.26 pDC L2
ENSG00000284543 LINC01226 -898162 sc-eQTL 6.79e-01 -0.0344 0.083 0.26 pDC L2
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.34e-01 -0.0608 0.0976 0.26 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.55e-01 0.0969 0.105 0.263 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.71e-01 -0.0494 0.0871 0.263 B_Memory LOneK1K
ENSG00000134644 PUM1 -457927 sc-eQTL 4.30e-01 0.061 0.0772 0.263 B_Memory LOneK1K
ENSG00000162510 MATN1 -115521 sc-eQTL 3.04e-01 0.0906 0.0879 0.263 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -149710 sc-eQTL 4.41e-01 0.0426 0.0553 0.263 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 3.56e-01 0.0676 0.0731 0.263 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -123629 sc-eQTL 4.67e-02 0.158 0.0791 0.263 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -688724 sc-eQTL 3.43e-01 0.0895 0.0942 0.263 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 4.58e-01 0.0554 0.0745 0.263 B_Naive LOneK1K
ENSG00000134644 PUM1 -457927 sc-eQTL 9.13e-01 -0.00772 0.0706 0.263 B_Naive LOneK1K
ENSG00000162510 MATN1 -115521 sc-eQTL 7.37e-02 0.121 0.0674 0.263 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.79e-01 0.0642 0.0476 0.263 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 8.56e-01 0.0112 0.0618 0.263 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.23e-01 0.0726 0.0732 0.263 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -688724 sc-eQTL 5.86e-01 -0.0431 0.0791 0.263 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 6.28e-01 0.0435 0.0896 0.263 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -457927 sc-eQTL 3.78e-01 0.0504 0.0571 0.263 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -149710 sc-eQTL 5.69e-02 0.0954 0.0498 0.263 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -300694 sc-eQTL 6.13e-01 -0.052 0.102 0.263 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -801501 sc-eQTL 4.49e-01 -0.08 0.105 0.263 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -898162 sc-eQTL 9.31e-01 -0.00752 0.0865 0.263 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -123629 sc-eQTL 1.29e-01 -0.123 0.0805 0.263 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -688724 sc-eQTL 8.39e-01 0.018 0.0884 0.261 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 9.58e-01 -0.00516 0.0967 0.261 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -457927 sc-eQTL 5.41e-01 -0.0485 0.0792 0.261 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -149710 sc-eQTL 1.38e-01 0.0939 0.0631 0.261 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -300694 sc-eQTL 5.37e-01 -0.0572 0.0925 0.261 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -801501 sc-eQTL 9.69e-01 0.00378 0.096 0.261 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -898162 sc-eQTL 8.98e-01 -0.0117 0.0912 0.261 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -123629 sc-eQTL 3.46e-01 -0.086 0.0911 0.261 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -688724 sc-eQTL 4.51e-01 -0.0737 0.0976 0.263 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -688918 sc-eQTL 5.39e-01 0.041 0.0667 0.263 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -457927 sc-eQTL 3.39e-01 0.07 0.073 0.263 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -149710 sc-eQTL 9.75e-01 -0.00259 0.0817 0.263 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -110440 sc-eQTL 3.08e-01 -0.0961 0.094 0.263 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -123629 sc-eQTL 5.91e-01 -0.0437 0.0813 0.263 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -110440 eQTL 3.13e-02 -0.0316 0.0146 0.0 0.0 0.228

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -898217 2.76e-07 1.42e-07 6.28e-08 2.15e-07 1.01e-07 8.33e-08 1.99e-07 5.56e-08 1.44e-07 8.53e-08 1.63e-07 1.15e-07 1.87e-07 7.95e-08 5.43e-08 7.98e-08 4.31e-08 1.64e-07 7.29e-08 5.35e-08 1.26e-07 1.42e-07 1.62e-07 3.07e-08 1.85e-07 1.39e-07 1.19e-07 1.26e-07 1.32e-07 1.07e-07 1.09e-07 4.32e-08 4.37e-08 8.89e-08 3.02e-08 2.74e-08 4.47e-08 8.25e-08 6.39e-08 6.67e-08 5.1e-08 1.59e-07 5.22e-08 1.74e-08 3.34e-08 1.01e-08 8.67e-08 2.05e-09 4.98e-08