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Genes within 1Mb (chr1:30607833:C:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688955 sc-eQTL 6.91e-01 -0.0379 0.0951 0.793 B L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 3.57e-01 0.0702 0.0761 0.793 B L1
ENSG00000134644 PUM1 -458158 sc-eQTL 7.37e-01 -0.0215 0.0639 0.793 B L1
ENSG00000162510 MATN1 -115752 sc-eQTL 4.65e-02 0.133 0.0666 0.793 B L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 8.78e-03 0.137 0.0518 0.793 B L1
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 5.66e-01 0.0354 0.0616 0.793 B L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 3.49e-01 0.0684 0.0729 0.793 B L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.70e-02 -0.139 0.081 0.793 CD4T L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.58e-01 -0.00333 0.0637 0.793 CD4T L1
ENSG00000134644 PUM1 -458158 sc-eQTL 2.25e-01 0.0688 0.0565 0.793 CD4T L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 1.21e-01 -0.0972 0.0625 0.793 CD4T L1
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 8.85e-01 0.00811 0.0562 0.793 CD4T L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 8.83e-01 -0.00989 0.0673 0.793 CD4T L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.57e-01 0.0194 0.107 0.793 CD8T L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.01e-01 -0.00892 0.0714 0.793 CD8T L1
ENSG00000134644 PUM1 -458158 sc-eQTL 2.48e-01 0.0726 0.0627 0.793 CD8T L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 5.59e-01 0.0357 0.061 0.793 CD8T L1
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 9.31e-01 -0.00617 0.0715 0.793 CD8T L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 7.40e-01 -0.0298 0.0899 0.793 CD8T L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 5.19e-01 -0.0622 0.0964 0.793 DC L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.04e-02 -0.223 0.113 0.793 DC L1
ENSG00000134644 PUM1 -458158 sc-eQTL 9.28e-02 -0.15 0.0888 0.793 DC L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.52e-01 -0.0481 0.0638 0.793 DC L1
ENSG00000168528 SERINC2 -801732 sc-eQTL 6.95e-01 -0.0414 0.105 0.793 DC L1
ENSG00000284543 LINC01226 -898393 sc-eQTL 1.70e-01 -0.0957 0.0695 0.793 DC L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 8.36e-01 -0.021 0.101 0.793 DC L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 2.77e-01 -0.0824 0.0755 0.793 Mono L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.72e-01 0.00331 0.0939 0.793 Mono L1
ENSG00000134644 PUM1 -458158 sc-eQTL 2.24e-03 -0.182 0.0589 0.793 Mono L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 5.77e-01 0.0309 0.0553 0.793 Mono L1
ENSG00000162512 SDC3 -300925 sc-eQTL 8.49e-01 -0.0202 0.106 0.793 Mono L1
ENSG00000168528 SERINC2 -801732 sc-eQTL 5.56e-02 -0.218 0.113 0.793 Mono L1
ENSG00000284543 LINC01226 -898393 sc-eQTL 4.52e-01 -0.0757 0.1 0.793 Mono L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.37e-01 0.0415 0.0878 0.793 Mono L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 2.17e-01 -0.129 0.105 0.794 NK L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.27e-01 0.0454 0.0717 0.794 NK L1
ENSG00000134644 PUM1 -458158 sc-eQTL 5.75e-01 0.0423 0.0753 0.794 NK L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.87e-02 0.189 0.0857 0.794 NK L1
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.47e-01 -0.141 0.0969 0.794 NK L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.75e-01 0.0378 0.0899 0.794 NK L1
ENSG00000060688 SNRNP40 -688955 sc-eQTL 2.23e-02 0.175 0.0761 0.793 Other_T L1
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 4.16e-01 0.067 0.0823 0.793 Other_T L1
ENSG00000134644 PUM1 -458158 sc-eQTL 4.84e-02 0.146 0.0734 0.793 Other_T L1
ENSG00000162511 LAPTM5 -149941 sc-eQTL 8.12e-01 0.0145 0.0607 0.793 Other_T L1
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.44e-01 0.145 0.0989 0.793 Other_T L1
ENSG00000287510 AL137857.1 -123860 sc-eQTL 5.72e-01 -0.0586 0.104 0.793 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.54e-01 -0.115 0.124 0.791 B_Activated L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 3.50e-01 -0.117 0.125 0.791 B_Activated L2
ENSG00000134644 PUM1 -458158 sc-eQTL 8.95e-01 -0.0154 0.116 0.791 B_Activated L2
ENSG00000162510 MATN1 -115752 sc-eQTL 2.81e-01 -0.109 0.101 0.791 B_Activated L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 1.54e-01 0.101 0.0703 0.791 B_Activated L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.11e-01 -0.181 0.113 0.791 B_Activated L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.32e-01 0.0795 0.101 0.791 B_Activated L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.07e-01 -0.0286 0.117 0.792 B_Intermediate L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 2.66e-01 0.108 0.0973 0.792 B_Intermediate L2
ENSG00000134644 PUM1 -458158 sc-eQTL 5.21e-01 -0.0592 0.0919 0.792 B_Intermediate L2
ENSG00000162510 MATN1 -115752 sc-eQTL 8.42e-01 -0.0191 0.0958 0.792 B_Intermediate L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.73e-01 0.0422 0.0587 0.792 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.41e-01 0.121 0.0821 0.792 B_Intermediate L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.31e-01 0.0444 0.0923 0.792 B_Intermediate L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.25e-01 0.11 0.112 0.793 B_Memory L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 8.76e-01 -0.0162 0.103 0.793 B_Memory L2
ENSG00000134644 PUM1 -458158 sc-eQTL 8.58e-01 -0.0161 0.09 0.793 B_Memory L2
ENSG00000162510 MATN1 -115752 sc-eQTL 4.79e-01 -0.0611 0.086 0.793 B_Memory L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.08e-01 0.0961 0.0761 0.793 B_Memory L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 9.85e-02 -0.144 0.0868 0.793 B_Memory L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 9.60e-02 0.17 0.102 0.793 B_Memory L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 4.26e-01 -0.0822 0.103 0.793 B_Naive1 L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 3.42e-01 0.0848 0.089 0.793 B_Naive1 L2
ENSG00000134644 PUM1 -458158 sc-eQTL 8.90e-01 0.0109 0.0787 0.793 B_Naive1 L2
ENSG00000162510 MATN1 -115752 sc-eQTL 4.26e-02 0.161 0.0791 0.793 B_Naive1 L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.97e-01 0.0363 0.0533 0.793 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 9.41e-01 0.00517 0.0701 0.793 B_Naive1 L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.58e-01 0.0383 0.0865 0.793 B_Naive1 L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 1.91e-01 -0.144 0.11 0.794 B_Naive2 L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.36e-02 0.153 0.0906 0.794 B_Naive2 L2
ENSG00000134644 PUM1 -458158 sc-eQTL 6.61e-01 -0.0392 0.0892 0.794 B_Naive2 L2
ENSG00000162510 MATN1 -115752 sc-eQTL 1.25e-01 0.131 0.0852 0.794 B_Naive2 L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.48e-01 0.0673 0.058 0.794 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 6.10e-01 0.0432 0.0847 0.794 B_Naive2 L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.57e-01 0.0681 0.0914 0.794 B_Naive2 L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 5.78e-02 -0.205 0.108 0.793 CD4_CTL L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 2.45e-01 -0.124 0.106 0.793 CD4_CTL L2
ENSG00000134644 PUM1 -458158 sc-eQTL 2.78e-01 0.113 0.104 0.793 CD4_CTL L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 7.89e-01 0.025 0.0933 0.793 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 5.89e-02 0.192 0.101 0.793 CD4_CTL L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.70e-01 0.124 0.0896 0.793 CD4_CTL L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.29e-01 -0.0185 0.0856 0.793 CD4_Naive L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.21e-01 -0.0488 0.0758 0.793 CD4_Naive L2
ENSG00000134644 PUM1 -458158 sc-eQTL 7.12e-01 0.0224 0.0606 0.793 CD4_Naive L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.39e-01 -0.0621 0.0648 0.793 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 6.89e-01 0.0264 0.0659 0.793 CD4_Naive L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.74e-01 -0.103 0.0754 0.793 CD4_Naive L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 1.62e-01 -0.149 0.106 0.793 CD4_TCM L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 7.66e-02 0.152 0.0855 0.793 CD4_TCM L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.68e-01 0.105 0.0759 0.793 CD4_TCM L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 9.76e-02 -0.105 0.0629 0.793 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 4.04e-01 -0.067 0.0801 0.793 CD4_TCM L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 3.68e-01 0.0805 0.0892 0.793 CD4_TCM L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 9.93e-01 -0.000887 0.108 0.793 CD4_TEM L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 7.36e-01 0.0348 0.103 0.793 CD4_TEM L2
ENSG00000134644 PUM1 -458158 sc-eQTL 2.23e-01 -0.105 0.0856 0.793 CD4_TEM L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 6.03e-01 0.0451 0.0868 0.793 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 2.16e-01 0.126 0.101 0.793 CD4_TEM L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 7.63e-01 -0.0302 0.1 0.793 CD4_TEM L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 5.92e-01 -0.0627 0.117 0.793 CD8_CTL L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 7.02e-01 -0.0343 0.0897 0.793 CD8_CTL L2
ENSG00000134644 PUM1 -458158 sc-eQTL 6.19e-01 0.0433 0.0871 0.793 CD8_CTL L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.80e-01 0.104 0.0962 0.793 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.61e-01 -0.142 0.101 0.793 CD8_CTL L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.19e-01 0.149 0.0948 0.793 CD8_CTL L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 4.03e-01 0.0894 0.107 0.793 CD8_Naive L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 4.85e-01 0.0644 0.0921 0.793 CD8_Naive L2
ENSG00000134644 PUM1 -458158 sc-eQTL 3.75e-01 0.0658 0.0741 0.793 CD8_Naive L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.53e-01 -0.0661 0.0709 0.793 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 8.78e-01 0.0137 0.0887 0.793 CD8_Naive L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.25e-01 -0.148 0.0961 0.793 CD8_Naive L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 5.98e-01 -0.0641 0.121 0.796 CD8_TCM L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.34e-01 0.0694 0.111 0.796 CD8_TCM L2
ENSG00000134644 PUM1 -458158 sc-eQTL 3.53e-02 0.219 0.104 0.796 CD8_TCM L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 6.08e-01 0.0562 0.11 0.796 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 3.36e-01 0.0976 0.101 0.796 CD8_TCM L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.59e-01 -0.0761 0.102 0.796 CD8_TCM L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.31e-01 -0.0237 0.111 0.788 CD8_TEM L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 7.91e-01 -0.0282 0.106 0.788 CD8_TEM L2
ENSG00000134644 PUM1 -458158 sc-eQTL 4.10e-01 0.0898 0.109 0.788 CD8_TEM L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 8.39e-01 0.0208 0.102 0.788 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 6.46e-01 0.0489 0.106 0.788 CD8_TEM L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.87e-02 0.175 0.0954 0.788 CD8_TEM L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 1.09e-01 0.181 0.112 0.79 MAIT L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 6.47e-01 -0.0459 0.1 0.79 MAIT L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.82e-02 0.225 0.0946 0.79 MAIT L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 6.93e-01 -0.0357 0.0904 0.79 MAIT L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 4.56e-01 0.0752 0.101 0.79 MAIT L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 7.10e-01 -0.0386 0.104 0.79 MAIT L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 6.63e-01 -0.0513 0.117 0.791 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 2.06e-01 0.125 0.0988 0.791 NK_CD56bright L2
ENSG00000134644 PUM1 -458158 sc-eQTL 5.54e-01 -0.0617 0.104 0.791 NK_CD56bright L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.96e-01 -0.0699 0.103 0.791 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 2.07e-01 -0.13 0.103 0.791 NK_CD56bright L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 3.34e-01 -0.0982 0.101 0.791 NK_CD56bright L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 2.70e-01 -0.123 0.111 0.793 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 1.86e-01 0.109 0.082 0.793 NK_CD56dim L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.59e-01 0.119 0.0841 0.793 NK_CD56dim L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 8.01e-03 0.237 0.0886 0.793 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.28e-01 -0.171 0.112 0.793 NK_CD56dim L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 8.48e-01 -0.0179 0.0931 0.793 NK_CD56dim L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 1.05e-01 0.19 0.117 0.795 NK_HLA L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 1.00e-02 -0.268 0.103 0.795 NK_HLA L2
ENSG00000134644 PUM1 -458158 sc-eQTL 7.67e-01 0.0303 0.102 0.795 NK_HLA L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.71e-01 0.0704 0.0974 0.795 NK_HLA L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 9.10e-01 -0.0117 0.104 0.795 NK_HLA L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 9.23e-01 0.00966 0.1 0.795 NK_HLA L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 2.01e-01 -0.141 0.11 0.793 NK_cytokine L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.77e-01 0.00253 0.086 0.793 NK_cytokine L2
ENSG00000134644 PUM1 -458158 sc-eQTL 4.82e-01 -0.0653 0.0929 0.793 NK_cytokine L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 1.60e-01 0.144 0.102 0.793 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 4.94e-01 0.0742 0.108 0.793 NK_cytokine L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 7.58e-01 0.0311 0.101 0.793 NK_cytokine L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.19e-01 -0.0301 0.131 0.796 PB L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.37e-01 -0.0936 0.151 0.796 PB L2
ENSG00000134644 PUM1 -458158 sc-eQTL 6.75e-01 0.0554 0.132 0.796 PB L2
ENSG00000162510 MATN1 -115752 sc-eQTL 6.02e-01 0.0641 0.123 0.796 PB L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 7.96e-01 0.0227 0.0877 0.796 PB L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 6.72e-01 0.051 0.12 0.796 PB L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 8.53e-02 0.219 0.126 0.796 PB L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 4.37e-01 0.066 0.0848 0.793 Pro_T L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 6.14e-01 -0.0544 0.108 0.793 Pro_T L2
ENSG00000134644 PUM1 -458158 sc-eQTL 3.08e-01 0.103 0.1 0.793 Pro_T L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 8.32e-01 -0.0153 0.0721 0.793 Pro_T L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 8.54e-01 0.0186 0.101 0.793 Pro_T L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 6.07e-01 -0.0478 0.0927 0.793 Pro_T L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 4.99e-01 -0.0742 0.11 0.793 Treg L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 5.38e-01 -0.0656 0.106 0.793 Treg L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.17e-01 0.133 0.0845 0.793 Treg L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 5.96e-01 -0.0517 0.0973 0.793 Treg L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 5.99e-01 -0.0522 0.0991 0.793 Treg L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 9.06e-02 0.167 0.0984 0.793 Treg L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 9.08e-01 0.0129 0.112 0.788 cDC L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 3.66e-02 -0.253 0.12 0.788 cDC L2
ENSG00000134644 PUM1 -458158 sc-eQTL 9.23e-01 0.0101 0.104 0.788 cDC L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 7.13e-01 -0.0269 0.0731 0.788 cDC L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 1.33e-01 -0.141 0.0933 0.788 cDC L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 2.56e-01 -0.105 0.0919 0.788 cDC L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 2.44e-01 -0.116 0.0989 0.788 cDC L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.38e-01 -0.0874 0.0911 0.793 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 9.37e-01 -0.00806 0.102 0.793 cMono_IL1B L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.84e-01 -0.0915 0.0686 0.793 cMono_IL1B L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.91e-01 0.0519 0.0604 0.793 cMono_IL1B L2
ENSG00000162512 SDC3 -300925 sc-eQTL 4.45e-01 0.087 0.114 0.793 cMono_IL1B L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 3.55e-02 -0.241 0.114 0.793 cMono_IL1B L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 5.09e-01 0.0674 0.102 0.793 cMono_IL1B L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 2.71e-01 0.105 0.0948 0.793 cMono_IL1B L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 5.12e-01 0.0632 0.096 0.793 cMono_S100A L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 4.62e-01 0.0836 0.113 0.793 cMono_S100A L2
ENSG00000134644 PUM1 -458158 sc-eQTL 5.65e-02 -0.156 0.0814 0.793 cMono_S100A L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 1.79e-01 0.0848 0.0628 0.793 cMono_S100A L2
ENSG00000162512 SDC3 -300925 sc-eQTL 4.59e-02 -0.217 0.108 0.793 cMono_S100A L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 8.40e-02 -0.199 0.115 0.793 cMono_S100A L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 4.36e-01 -0.0731 0.0936 0.793 cMono_S100A L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.95e-01 -0.0643 0.094 0.793 cMono_S100A L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.24e-02 -0.256 0.146 0.8 gdT L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 1.13e-01 0.201 0.126 0.8 gdT L2
ENSG00000134644 PUM1 -458158 sc-eQTL 4.28e-01 -0.104 0.131 0.8 gdT L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.68e-01 -0.128 0.142 0.8 gdT L2
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 1.37e-01 -0.195 0.13 0.8 gdT L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 9.75e-01 0.00394 0.127 0.8 gdT L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 6.75e-02 -0.197 0.107 0.802 intMono L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 3.53e-01 0.108 0.116 0.802 intMono L2
ENSG00000134644 PUM1 -458158 sc-eQTL 6.05e-01 -0.0511 0.0987 0.802 intMono L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.45e-01 0.0592 0.0774 0.802 intMono L2
ENSG00000162512 SDC3 -300925 sc-eQTL 9.75e-01 0.00334 0.106 0.802 intMono L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 4.36e-01 0.0866 0.111 0.802 intMono L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 7.25e-01 -0.0371 0.105 0.802 intMono L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 9.12e-01 -0.0116 0.105 0.802 intMono L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 1.26e-01 -0.154 0.1 0.794 ncMono L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 6.93e-01 0.0425 0.107 0.794 ncMono L2
ENSG00000134644 PUM1 -458158 sc-eQTL 7.75e-01 -0.0251 0.0878 0.794 ncMono L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.85e-01 -0.0692 0.0796 0.794 ncMono L2
ENSG00000162512 SDC3 -300925 sc-eQTL 6.29e-01 -0.0432 0.0894 0.794 ncMono L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 9.31e-01 -0.00841 0.0976 0.794 ncMono L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 7.34e-01 -0.0331 0.0975 0.794 ncMono L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.86e-01 0.134 0.101 0.794 ncMono L2
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.10e-01 -0.117 0.115 0.794 pDC L2
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 4.72e-01 -0.0908 0.126 0.794 pDC L2
ENSG00000134644 PUM1 -458158 sc-eQTL 1.10e-03 -0.336 0.101 0.794 pDC L2
ENSG00000162511 LAPTM5 -149941 sc-eQTL 4.36e-01 -0.0758 0.0971 0.794 pDC L2
ENSG00000168528 SERINC2 -801732 sc-eQTL 5.42e-01 -0.0719 0.118 0.794 pDC L2
ENSG00000284543 LINC01226 -898393 sc-eQTL 3.97e-01 -0.0775 0.0914 0.794 pDC L2
ENSG00000287510 AL137857.1 -123860 sc-eQTL 1.31e-01 0.162 0.107 0.794 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -688955 sc-eQTL 7.39e-01 -0.0375 0.112 0.793 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 6.25e-01 0.0457 0.0933 0.793 B_Memory LOneK1K
ENSG00000134644 PUM1 -458158 sc-eQTL 3.60e-01 -0.0758 0.0825 0.793 B_Memory LOneK1K
ENSG00000162510 MATN1 -115752 sc-eQTL 7.08e-01 -0.0353 0.0943 0.793 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.75e-01 0.0646 0.0591 0.793 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 6.35e-01 0.0372 0.0783 0.793 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -123860 sc-eQTL 3.75e-01 0.0758 0.0852 0.793 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -688955 sc-eQTL 6.32e-01 -0.0485 0.101 0.793 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 1.02e-01 0.13 0.0794 0.793 B_Naive LOneK1K
ENSG00000134644 PUM1 -458158 sc-eQTL 7.76e-01 -0.0216 0.0755 0.793 B_Naive LOneK1K
ENSG00000162510 MATN1 -115752 sc-eQTL 1.52e-02 0.176 0.0717 0.793 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -149941 sc-eQTL 3.84e-01 0.0446 0.0511 0.793 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 5.73e-01 0.0373 0.0661 0.793 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -123860 sc-eQTL 5.20e-01 0.0506 0.0785 0.793 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -688955 sc-eQTL 8.74e-01 -0.0137 0.0865 0.793 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 8.32e-01 0.0208 0.098 0.793 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -458158 sc-eQTL 8.88e-03 -0.162 0.0615 0.793 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -149941 sc-eQTL 2.02e-01 0.0701 0.0547 0.793 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -300925 sc-eQTL 6.91e-01 -0.0447 0.112 0.793 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -801732 sc-eQTL 4.70e-02 -0.228 0.114 0.793 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -898393 sc-eQTL 8.44e-01 0.0186 0.0945 0.793 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.70e-01 0.0641 0.0884 0.793 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.98e-02 -0.197 0.0954 0.793 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 6.00e-01 0.0553 0.105 0.793 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -458158 sc-eQTL 5.50e-01 -0.0516 0.0863 0.793 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -149941 sc-eQTL 6.71e-01 -0.0294 0.0691 0.793 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -300925 sc-eQTL 7.70e-01 0.0295 0.101 0.793 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -801732 sc-eQTL 8.61e-01 0.0183 0.105 0.793 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -898393 sc-eQTL 4.20e-01 -0.0802 0.0992 0.793 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -123860 sc-eQTL 8.71e-01 0.0162 0.0994 0.793 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -688955 sc-eQTL 3.02e-01 -0.109 0.105 0.793 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -689149 sc-eQTL 7.63e-01 0.0218 0.0721 0.793 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -458158 sc-eQTL 5.09e-01 0.0522 0.0789 0.793 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -149941 sc-eQTL 1.70e-02 0.209 0.0871 0.793 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -110671 sc-eQTL 4.21e-01 -0.0819 0.102 0.793 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -123860 sc-eQTL 4.90e-01 0.0606 0.0878 0.793 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000142910 TINAGL1 -968652 pQTL 0.03 -0.0381 0.0176 0.00114 0.0 0.244

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina