logo

Genes within 1Mb (chr1:30604986:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -691802 sc-eQTL 3.37e-01 0.0871 0.0905 0.256 B L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 6.12e-01 -0.0368 0.0726 0.256 B L1
ENSG00000134644 PUM1 -461005 sc-eQTL 7.19e-01 -0.022 0.0609 0.256 B L1
ENSG00000162510 MATN1 -118599 sc-eQTL 1.00e-01 0.105 0.0637 0.256 B L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.28e-01 0.0491 0.0501 0.256 B L1
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 3.57e-01 0.0541 0.0587 0.256 B L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.48e-01 0.1 0.0692 0.256 B L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 2.25e-01 -0.0944 0.0776 0.256 CD4T L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.89e-01 -0.0329 0.0608 0.256 CD4T L1
ENSG00000134644 PUM1 -461005 sc-eQTL 4.12e-01 0.0445 0.0541 0.256 CD4T L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.48e-01 0.0563 0.0599 0.256 CD4T L1
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 6.94e-01 -0.0211 0.0537 0.256 CD4T L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 4.19e-01 -0.052 0.0642 0.256 CD4T L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.52e-01 0.0457 0.101 0.256 CD8T L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 6.21e-01 0.0333 0.0672 0.256 CD8T L1
ENSG00000134644 PUM1 -461005 sc-eQTL 2.15e-01 0.0734 0.059 0.256 CD8T L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.90e-01 0.0754 0.0573 0.256 CD8T L1
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 5.62e-01 -0.0391 0.0674 0.256 CD8T L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 2.29e-01 -0.102 0.0844 0.256 CD8T L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.94e-01 -0.0624 0.0911 0.259 DC L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.09e-01 -0.11 0.108 0.259 DC L1
ENSG00000134644 PUM1 -461005 sc-eQTL 1.35e-01 -0.126 0.0841 0.259 DC L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.61e-01 0.0679 0.0602 0.259 DC L1
ENSG00000168528 SERINC2 -804579 sc-eQTL 4.92e-01 0.0685 0.0995 0.259 DC L1
ENSG00000284543 LINC01226 -901240 sc-eQTL 8.65e-01 0.0112 0.066 0.259 DC L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 2.34e-01 0.114 0.0952 0.259 DC L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.63e-01 -0.0516 0.0703 0.256 Mono L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 6.27e-01 0.0424 0.0872 0.256 Mono L1
ENSG00000134644 PUM1 -461005 sc-eQTL 4.16e-01 0.0455 0.0558 0.256 Mono L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.33e-01 0.0772 0.0512 0.256 Mono L1
ENSG00000162512 SDC3 -303772 sc-eQTL 5.27e-01 -0.0625 0.0988 0.256 Mono L1
ENSG00000168528 SERINC2 -804579 sc-eQTL 4.49e-01 -0.0803 0.106 0.256 Mono L1
ENSG00000284543 LINC01226 -901240 sc-eQTL 8.79e-01 -0.0143 0.0934 0.256 Mono L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.52e-01 -0.117 0.0813 0.256 Mono L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 3.79e-01 -0.0869 0.0985 0.258 NK L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.51e-01 0.0403 0.0675 0.258 NK L1
ENSG00000134644 PUM1 -461005 sc-eQTL 5.94e-01 0.0378 0.0708 0.258 NK L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 9.98e-01 0.000251 0.0815 0.258 NK L1
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 2.05e-01 -0.116 0.0913 0.258 NK L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 6.43e-01 -0.0393 0.0845 0.258 NK L1
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.48e-01 0.0337 0.0736 0.256 Other_T L1
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 9.56e-01 -0.0043 0.0787 0.256 Other_T L1
ENSG00000134644 PUM1 -461005 sc-eQTL 4.60e-01 0.0523 0.0707 0.256 Other_T L1
ENSG00000162511 LAPTM5 -152788 sc-eQTL 8.31e-02 0.1 0.0576 0.256 Other_T L1
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 4.01e-01 0.0799 0.0948 0.256 Other_T L1
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.21e-01 -0.153 0.0984 0.256 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -691802 sc-eQTL 7.03e-01 0.0448 0.117 0.25 B_Activated L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.44e-01 -0.0388 0.118 0.25 B_Activated L2
ENSG00000134644 PUM1 -461005 sc-eQTL 5.80e-01 -0.0609 0.11 0.25 B_Activated L2
ENSG00000162510 MATN1 -118599 sc-eQTL 9.65e-01 -0.0042 0.0961 0.25 B_Activated L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 8.89e-01 0.00936 0.0671 0.25 B_Activated L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 7.91e-01 0.0287 0.108 0.25 B_Activated L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 7.22e-01 -0.0341 0.0958 0.25 B_Activated L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.41e-01 -0.0868 0.112 0.258 B_Intermediate L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 8.03e-01 0.0234 0.0937 0.258 B_Intermediate L2
ENSG00000134644 PUM1 -461005 sc-eQTL 4.98e-01 0.06 0.0883 0.258 B_Intermediate L2
ENSG00000162510 MATN1 -118599 sc-eQTL 2.69e-01 0.102 0.0918 0.258 B_Intermediate L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.68e-01 0.0778 0.0562 0.258 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 1.45e-01 0.115 0.0789 0.258 B_Intermediate L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.41e-02 0.217 0.0874 0.258 B_Intermediate L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 2.19e-01 0.133 0.108 0.259 B_Memory L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 1.19e-01 -0.155 0.0992 0.259 B_Memory L2
ENSG00000134644 PUM1 -461005 sc-eQTL 7.97e-01 0.0223 0.0868 0.259 B_Memory L2
ENSG00000162510 MATN1 -118599 sc-eQTL 5.03e-01 0.0557 0.083 0.259 B_Memory L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 5.93e-01 0.0394 0.0736 0.259 B_Memory L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 5.83e-01 0.0462 0.0842 0.259 B_Memory L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.81e-01 0.132 0.0983 0.259 B_Memory L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 2.21e-01 0.12 0.0976 0.256 B_Naive1 L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.57e-01 -0.0497 0.0845 0.256 B_Naive1 L2
ENSG00000134644 PUM1 -461005 sc-eQTL 7.89e-02 -0.131 0.0741 0.256 B_Naive1 L2
ENSG00000162510 MATN1 -118599 sc-eQTL 1.27e-01 0.115 0.0753 0.256 B_Naive1 L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.46e-01 0.0476 0.0505 0.256 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 5.64e-01 0.0384 0.0664 0.256 B_Naive1 L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 5.10e-01 0.0541 0.082 0.256 B_Naive1 L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 3.57e-01 -0.0972 0.105 0.258 B_Naive2 L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 4.03e-01 0.0729 0.087 0.258 B_Naive2 L2
ENSG00000134644 PUM1 -461005 sc-eQTL 3.82e-01 0.0747 0.0852 0.258 B_Naive2 L2
ENSG00000162510 MATN1 -118599 sc-eQTL 3.58e-01 0.0753 0.0817 0.258 B_Naive2 L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 6.20e-01 0.0276 0.0556 0.258 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 9.17e-01 -0.00841 0.081 0.258 B_Naive2 L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 6.14e-01 0.0442 0.0874 0.258 B_Naive2 L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 2.99e-01 -0.108 0.104 0.257 CD4_CTL L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 1.78e-01 -0.137 0.102 0.257 CD4_CTL L2
ENSG00000134644 PUM1 -461005 sc-eQTL 6.27e-02 0.186 0.0992 0.257 CD4_CTL L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.81e-01 -0.0783 0.0891 0.257 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 7.26e-01 0.0342 0.0976 0.257 CD4_CTL L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.08e-01 0.138 0.0856 0.257 CD4_CTL L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.32e-01 0.0634 0.0806 0.256 CD4_Naive L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.15e-01 -0.0262 0.0716 0.256 CD4_Naive L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.23e-01 0.0128 0.0572 0.256 CD4_Naive L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.44e-01 0.0894 0.0609 0.256 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 3.91e-01 -0.0533 0.062 0.256 CD4_Naive L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.42e-02 -0.123 0.0709 0.256 CD4_Naive L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 2.26e-03 -0.308 0.0996 0.256 CD4_TCM L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 8.80e-01 -0.0124 0.0821 0.256 CD4_TCM L2
ENSG00000134644 PUM1 -461005 sc-eQTL 9.59e-01 0.00371 0.0727 0.256 CD4_TCM L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.99e-01 0.0626 0.0602 0.256 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 4.31e-01 0.0602 0.0764 0.256 CD4_TCM L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 7.00e-01 0.0329 0.0852 0.256 CD4_TCM L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 5.22e-01 -0.0655 0.102 0.256 CD4_TEM L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.57e-01 0.0896 0.0971 0.256 CD4_TEM L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.43e-01 -0.0161 0.081 0.256 CD4_TEM L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 5.69e-01 -0.0467 0.0819 0.256 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 7.40e-01 0.0318 0.0959 0.256 CD4_TEM L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.91e-01 0.124 0.0941 0.256 CD4_TEM L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 8.90e-01 -0.0153 0.111 0.256 CD8_CTL L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.42e-01 -0.0279 0.0849 0.256 CD8_CTL L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.63e-01 0.0143 0.0825 0.256 CD8_CTL L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.08e-01 0.0931 0.0911 0.256 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 5.63e-02 -0.183 0.0952 0.256 CD8_CTL L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.66e-01 -0.0816 0.0901 0.256 CD8_CTL L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 1.25e-01 0.157 0.102 0.256 CD8_Naive L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.14e-01 0.0887 0.0879 0.256 CD8_Naive L2
ENSG00000134644 PUM1 -461005 sc-eQTL 3.58e-02 0.148 0.0702 0.256 CD8_Naive L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.02e-01 0.0866 0.0677 0.256 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 4.61e-01 -0.0626 0.0847 0.256 CD8_Naive L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 4.57e-01 -0.0687 0.0922 0.256 CD8_Naive L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.57e-02 -0.228 0.114 0.257 CD8_TCM L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 9.03e-01 -0.0129 0.105 0.257 CD8_TCM L2
ENSG00000134644 PUM1 -461005 sc-eQTL 1.85e-01 -0.131 0.0984 0.257 CD8_TCM L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 7.78e-01 0.0292 0.103 0.257 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 6.62e-01 -0.042 0.0957 0.257 CD8_TCM L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 4.38e-01 -0.0751 0.0966 0.257 CD8_TCM L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.70e-01 0.0457 0.107 0.258 CD8_TEM L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.09e-01 -0.0384 0.103 0.258 CD8_TEM L2
ENSG00000134644 PUM1 -461005 sc-eQTL 9.78e-01 0.00288 0.105 0.258 CD8_TEM L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.60e-01 -0.111 0.0984 0.258 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 8.01e-01 0.0259 0.102 0.258 CD8_TEM L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.28e-01 0.0908 0.0925 0.258 CD8_TEM L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.14e-01 -0.0548 0.109 0.258 MAIT L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 6.75e-01 -0.0405 0.0963 0.258 MAIT L2
ENSG00000134644 PUM1 -461005 sc-eQTL 9.96e-01 -0.000419 0.0923 0.258 MAIT L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.56e-01 0.123 0.0867 0.258 MAIT L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 6.92e-01 0.0385 0.097 0.258 MAIT L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.22e-01 -0.0989 0.0997 0.258 MAIT L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.78e-01 -0.0464 0.112 0.262 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 8.56e-02 0.162 0.0936 0.262 NK_CD56bright L2
ENSG00000134644 PUM1 -461005 sc-eQTL 7.06e-01 -0.0374 0.099 0.262 NK_CD56bright L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.66e-01 -0.135 0.0972 0.262 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 2.59e-01 -0.111 0.0978 0.262 NK_CD56bright L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 5.25e-01 -0.0615 0.0966 0.262 NK_CD56bright L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 1.21e-01 -0.162 0.104 0.256 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.74e-01 -0.0435 0.0772 0.256 NK_CD56dim L2
ENSG00000134644 PUM1 -461005 sc-eQTL 2.33e-01 0.0946 0.079 0.256 NK_CD56dim L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 7.00e-01 0.0326 0.0846 0.256 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 1.55e-01 -0.15 0.105 0.256 NK_CD56dim L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.90e-01 0.0121 0.0874 0.256 NK_CD56dim L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.88e-01 0.045 0.112 0.256 NK_HLA L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.51e-02 -0.21 0.0988 0.256 NK_HLA L2
ENSG00000134644 PUM1 -461005 sc-eQTL 7.01e-01 0.0374 0.0973 0.256 NK_HLA L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 7.51e-01 -0.0296 0.0929 0.256 NK_HLA L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 7.47e-01 -0.0319 0.0988 0.256 NK_HLA L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 2.59e-02 -0.212 0.0944 0.256 NK_HLA L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 8.36e-01 0.0212 0.102 0.256 NK_cytokine L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.05e-02 0.144 0.079 0.256 NK_cytokine L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.36e-01 0.0178 0.0861 0.256 NK_cytokine L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 9.89e-01 0.00126 0.0948 0.256 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 7.74e-01 -0.0288 0.1 0.256 NK_cytokine L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.09e-01 -0.0226 0.0935 0.256 NK_cytokine L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 8.22e-01 -0.0264 0.117 0.285 PB L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 1.26e-01 -0.208 0.135 0.285 PB L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.63e-01 0.0204 0.118 0.285 PB L2
ENSG00000162510 MATN1 -118599 sc-eQTL 5.49e-01 0.0662 0.11 0.285 PB L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.45e-01 0.0915 0.0783 0.285 PB L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 6.45e-01 0.0497 0.108 0.285 PB L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.32e-01 -0.0243 0.115 0.285 PB L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 5.70e-01 -0.0457 0.0805 0.257 Pro_T L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.39e-01 -0.0977 0.102 0.257 Pro_T L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.85e-01 -0.0138 0.0953 0.257 Pro_T L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 9.48e-01 -0.00448 0.0684 0.257 Pro_T L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 5.45e-01 0.0578 0.0955 0.257 Pro_T L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.22e-01 -0.0871 0.0877 0.257 Pro_T L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 1.59e-01 -0.151 0.107 0.256 Treg L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 9.77e-01 -0.00299 0.104 0.256 Treg L2
ENSG00000134644 PUM1 -461005 sc-eQTL 2.31e-02 0.187 0.0818 0.256 Treg L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 8.66e-01 0.0161 0.0949 0.256 Treg L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 1.76e-01 -0.131 0.0962 0.256 Treg L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.03e-01 0.157 0.0959 0.256 Treg L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 6.67e-01 0.0453 0.105 0.261 cDC L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 8.43e-01 0.0226 0.114 0.261 cDC L2
ENSG00000134644 PUM1 -461005 sc-eQTL 9.87e-01 0.00156 0.0979 0.261 cDC L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 6.35e-01 0.0326 0.0686 0.261 cDC L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 2.89e-01 0.0934 0.0878 0.261 cDC L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 1.41e-01 -0.127 0.086 0.261 cDC L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.81e-01 0.125 0.0927 0.261 cDC L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 3.35e-01 -0.0815 0.0844 0.256 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 4.24e-01 0.0755 0.0942 0.256 cMono_IL1B L2
ENSG00000134644 PUM1 -461005 sc-eQTL 1.08e-01 0.102 0.0635 0.256 cMono_IL1B L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.82e-01 0.0603 0.0559 0.256 cMono_IL1B L2
ENSG00000162512 SDC3 -303772 sc-eQTL 8.40e-01 -0.0213 0.106 0.256 cMono_IL1B L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 3.96e-01 -0.0907 0.107 0.256 cMono_IL1B L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 7.04e-01 -0.0359 0.0945 0.256 cMono_IL1B L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.67e-01 -0.0795 0.088 0.256 cMono_IL1B L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 5.42e-01 -0.0542 0.0887 0.256 cMono_S100A L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 8.52e-01 -0.0196 0.105 0.256 cMono_S100A L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.31e-01 0.0162 0.0758 0.256 cMono_S100A L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 4.62e-01 0.0428 0.0582 0.256 cMono_S100A L2
ENSG00000162512 SDC3 -303772 sc-eQTL 5.94e-01 -0.0537 0.101 0.256 cMono_S100A L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 8.16e-01 -0.0248 0.107 0.256 cMono_S100A L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 2.77e-01 0.094 0.0863 0.256 cMono_S100A L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.18e-02 -0.151 0.0863 0.256 cMono_S100A L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 5.05e-01 0.091 0.136 0.276 gdT L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 3.64e-01 0.107 0.117 0.276 gdT L2
ENSG00000134644 PUM1 -461005 sc-eQTL 1.73e-01 0.165 0.12 0.276 gdT L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 9.11e-01 -0.0147 0.131 0.276 gdT L2
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 9.30e-01 -0.0106 0.121 0.276 gdT L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 2.08e-01 -0.148 0.117 0.276 gdT L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 8.62e-01 -0.0175 0.1 0.256 intMono L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 9.70e-01 0.00404 0.108 0.256 intMono L2
ENSG00000134644 PUM1 -461005 sc-eQTL 3.39e-01 -0.0873 0.0912 0.256 intMono L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 7.22e-01 0.0256 0.0717 0.256 intMono L2
ENSG00000162512 SDC3 -303772 sc-eQTL 9.52e-01 0.00588 0.0982 0.256 intMono L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 9.48e-01 0.00677 0.103 0.256 intMono L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 9.63e-01 -0.00452 0.0974 0.256 intMono L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 4.75e-02 -0.192 0.0965 0.256 intMono L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 9.95e-01 0.000617 0.0933 0.26 ncMono L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.93e-01 0.0261 0.0995 0.26 ncMono L2
ENSG00000134644 PUM1 -461005 sc-eQTL 6.11e-01 -0.0414 0.0813 0.26 ncMono L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 3.54e-01 0.0684 0.0737 0.26 ncMono L2
ENSG00000162512 SDC3 -303772 sc-eQTL 2.00e-02 -0.192 0.0817 0.26 ncMono L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 9.97e-01 -0.000356 0.0904 0.26 ncMono L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 9.04e-01 0.0109 0.0903 0.26 ncMono L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 8.09e-01 0.0227 0.0936 0.26 ncMono L2
ENSG00000060688 SNRNP40 -691802 sc-eQTL 1.75e-01 -0.143 0.105 0.254 pDC L2
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.06e-01 0.077 0.116 0.254 pDC L2
ENSG00000134644 PUM1 -461005 sc-eQTL 8.89e-01 -0.0134 0.0959 0.254 pDC L2
ENSG00000162511 LAPTM5 -152788 sc-eQTL 5.64e-01 0.0516 0.0891 0.254 pDC L2
ENSG00000168528 SERINC2 -804579 sc-eQTL 4.25e-01 -0.0863 0.108 0.254 pDC L2
ENSG00000284543 LINC01226 -901240 sc-eQTL 7.68e-01 -0.0248 0.0839 0.254 pDC L2
ENSG00000287510 AL137857.1 -126707 sc-eQTL 5.16e-01 -0.0643 0.0986 0.254 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.39e-01 0.0823 0.106 0.256 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 6.90e-01 -0.0353 0.0884 0.256 B_Memory LOneK1K
ENSG00000134644 PUM1 -461005 sc-eQTL 4.62e-01 0.0577 0.0783 0.256 B_Memory LOneK1K
ENSG00000162510 MATN1 -118599 sc-eQTL 2.84e-01 0.0957 0.0891 0.256 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -152788 sc-eQTL 6.77e-01 0.0234 0.0561 0.256 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 1.74e-01 0.101 0.0739 0.256 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -126707 sc-eQTL 5.11e-02 0.157 0.0802 0.256 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -691802 sc-eQTL 3.17e-01 0.0957 0.0953 0.256 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.55e-01 0.0447 0.0755 0.256 B_Naive LOneK1K
ENSG00000134644 PUM1 -461005 sc-eQTL 9.14e-01 -0.00769 0.0714 0.256 B_Naive LOneK1K
ENSG00000162510 MATN1 -118599 sc-eQTL 1.44e-01 0.1 0.0684 0.256 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.90e-01 0.0635 0.0482 0.256 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 9.86e-01 -0.00113 0.0625 0.256 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.13e-01 0.075 0.0741 0.256 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -691802 sc-eQTL 5.39e-01 -0.0493 0.0801 0.256 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.94e-01 0.0485 0.0908 0.256 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -461005 sc-eQTL 2.87e-01 0.0617 0.0578 0.256 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -152788 sc-eQTL 1.07e-01 0.082 0.0506 0.256 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -303772 sc-eQTL 7.42e-01 -0.0343 0.104 0.256 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -804579 sc-eQTL 4.98e-01 -0.0725 0.107 0.256 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -901240 sc-eQTL 9.77e-01 -0.00254 0.0876 0.256 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -126707 sc-eQTL 1.12e-01 -0.13 0.0816 0.256 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -691802 sc-eQTL 9.46e-01 -0.00604 0.0893 0.254 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 7.77e-01 0.0277 0.0977 0.254 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -461005 sc-eQTL 3.26e-01 -0.0785 0.0798 0.254 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -152788 sc-eQTL 2.76e-01 0.0697 0.0638 0.254 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -303772 sc-eQTL 6.66e-01 -0.0404 0.0935 0.254 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -804579 sc-eQTL 8.34e-01 0.0204 0.097 0.254 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -901240 sc-eQTL 9.69e-01 -0.00358 0.092 0.254 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -126707 sc-eQTL 3.44e-01 -0.0871 0.092 0.254 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -691802 sc-eQTL 4.93e-01 -0.0682 0.0994 0.256 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -691996 sc-eQTL 5.39e-01 0.0417 0.0679 0.256 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -461005 sc-eQTL 4.15e-01 0.0607 0.0743 0.256 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -152788 sc-eQTL 8.79e-01 0.0127 0.0832 0.256 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -113518 sc-eQTL 2.79e-01 -0.104 0.0957 0.256 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -126707 sc-eQTL 6.36e-01 -0.0392 0.0828 0.256 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -113518 eQTL 4.41e-02 -0.0297 0.0148 0.0 0.0 0.224

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -901295 2.74e-07 1.3e-07 4.48e-08 1.82e-07 9.79e-08 9.8e-08 1.53e-07 5.43e-08 1.45e-07 5.42e-08 1.57e-07 8.68e-08 1.45e-07 6.76e-08 6.04e-08 7.36e-08 3.93e-08 1.27e-07 5.75e-08 4.23e-08 1.19e-07 1.27e-07 1.44e-07 3.03e-08 1.46e-07 1.21e-07 1.07e-07 9.74e-08 1.12e-07 1.03e-07 9.7e-08 3.08e-08 3.89e-08 8.25e-08 7.51e-08 3.53e-08 5.04e-08 9.23e-08 6.55e-08 3.8e-08 5.44e-08 1.33e-07 5.24e-08 1.52e-08 3.84e-08 1.84e-08 1.22e-07 1.88e-09 5.04e-08