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Genes within 1Mb (chr1:30604147:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.70e-01 -0.0567 0.0784 0.395 B L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.51e-01 -0.00384 0.0628 0.395 B L1
ENSG00000134644 PUM1 -461844 sc-eQTL 8.84e-01 -0.00768 0.0527 0.395 B L1
ENSG00000162510 MATN1 -119438 sc-eQTL 7.63e-01 0.0167 0.0554 0.395 B L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 9.88e-01 0.000644 0.0434 0.395 B L1
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 8.24e-01 -0.0114 0.0509 0.395 B L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.29e-01 -0.0476 0.0601 0.395 B L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 6.83e-01 -0.0279 0.0684 0.395 CD4T L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.93e-01 0.0211 0.0534 0.395 CD4T L1
ENSG00000134644 PUM1 -461844 sc-eQTL 7.91e-01 -0.0126 0.0476 0.395 CD4T L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 3.38e-02 -0.111 0.0522 0.395 CD4T L1
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 9.42e-01 0.00345 0.0472 0.395 CD4T L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 2.90e-01 -0.0597 0.0563 0.395 CD4T L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.73e-01 -0.00303 0.0894 0.395 CD8T L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.81e-01 -0.0244 0.0595 0.395 CD8T L1
ENSG00000134644 PUM1 -461844 sc-eQTL 3.55e-01 -0.0484 0.0523 0.395 CD8T L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.16e-01 -0.0629 0.0507 0.395 CD8T L1
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 1.09e-01 0.0953 0.0593 0.395 CD8T L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 8.91e-01 0.0103 0.0749 0.395 CD8T L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.71e-01 -0.00283 0.0784 0.394 DC L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.15e-01 0.0217 0.0929 0.394 DC L1
ENSG00000134644 PUM1 -461844 sc-eQTL 8.00e-01 0.0185 0.0727 0.394 DC L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 9.84e-02 -0.0857 0.0516 0.394 DC L1
ENSG00000168528 SERINC2 -805418 sc-eQTL 1.39e-01 -0.126 0.0852 0.394 DC L1
ENSG00000284543 LINC01226 -902079 sc-eQTL 6.08e-01 -0.0291 0.0567 0.394 DC L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 5.38e-02 -0.158 0.0814 0.394 DC L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 6.90e-01 -0.0244 0.061 0.395 Mono L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.99e-01 -0.00957 0.0756 0.395 Mono L1
ENSG00000134644 PUM1 -461844 sc-eQTL 8.54e-02 -0.0832 0.0481 0.395 Mono L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.83e-02 -0.0811 0.0442 0.395 Mono L1
ENSG00000162512 SDC3 -304611 sc-eQTL 7.11e-01 0.0318 0.0857 0.395 Mono L1
ENSG00000168528 SERINC2 -805418 sc-eQTL 6.37e-02 -0.17 0.0912 0.395 Mono L1
ENSG00000284543 LINC01226 -902079 sc-eQTL 3.70e-01 -0.0727 0.0809 0.395 Mono L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 5.35e-01 0.044 0.0707 0.395 Mono L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 3.29e-01 -0.0855 0.0873 0.397 NK L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.66e-01 -0.0101 0.0599 0.397 NK L1
ENSG00000134644 PUM1 -461844 sc-eQTL 9.47e-01 0.00417 0.0628 0.397 NK L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.06e-01 -0.0373 0.0723 0.397 NK L1
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.44e-01 -0.0266 0.0812 0.397 NK L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 1.81e-01 -0.1 0.0747 0.397 NK L1
ENSG00000060688 SNRNP40 -692641 sc-eQTL 2.42e-01 0.075 0.0639 0.395 Other_T L1
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 4.06e-01 0.0569 0.0684 0.395 Other_T L1
ENSG00000134644 PUM1 -461844 sc-eQTL 9.46e-01 -0.0042 0.0616 0.395 Other_T L1
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.62e-01 -0.0566 0.0503 0.395 Other_T L1
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 8.08e-01 0.0201 0.0826 0.395 Other_T L1
ENSG00000287510 AL137857.1 -127546 sc-eQTL 8.29e-01 0.0186 0.0861 0.395 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.35e-01 -0.0351 0.104 0.401 B_Activated L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.10e-01 0.0118 0.105 0.401 B_Activated L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.66e-01 -0.0164 0.0971 0.401 B_Activated L2
ENSG00000162510 MATN1 -119438 sc-eQTL 5.18e-01 -0.0549 0.0848 0.401 B_Activated L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 3.40e-01 0.0565 0.0591 0.401 B_Activated L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 3.22e-01 -0.0947 0.0953 0.401 B_Activated L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.01e-01 0.0875 0.0843 0.401 B_Activated L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.68e-01 0.0283 0.0959 0.393 B_Intermediate L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 5.47e-01 -0.0482 0.0799 0.393 B_Intermediate L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.15e-01 0.0177 0.0754 0.393 B_Intermediate L2
ENSG00000162510 MATN1 -119438 sc-eQTL 4.82e-01 0.0553 0.0784 0.393 B_Intermediate L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.23e-01 -0.0587 0.048 0.393 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.64e-01 -0.0203 0.0676 0.393 B_Intermediate L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 8.09e-02 -0.132 0.0751 0.393 B_Intermediate L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.04e-01 0.0113 0.0939 0.394 B_Memory L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.77e-01 0.0361 0.0864 0.394 B_Memory L2
ENSG00000134644 PUM1 -461844 sc-eQTL 2.05e-01 -0.0953 0.075 0.394 B_Memory L2
ENSG00000162510 MATN1 -119438 sc-eQTL 2.25e-01 -0.0874 0.0718 0.394 B_Memory L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 4.82e-01 -0.0449 0.0638 0.394 B_Memory L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.06e-01 -0.0276 0.073 0.394 B_Memory L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.43e-01 0.0811 0.0854 0.394 B_Memory L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 1.31e-01 -0.128 0.0844 0.395 B_Naive1 L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 4.79e-01 0.0519 0.0732 0.395 B_Naive1 L2
ENSG00000134644 PUM1 -461844 sc-eQTL 3.55e-01 0.0597 0.0645 0.395 B_Naive1 L2
ENSG00000162510 MATN1 -119438 sc-eQTL 8.97e-01 0.00853 0.0656 0.395 B_Naive1 L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.16e-01 -0.0541 0.0436 0.395 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 9.91e-01 0.000684 0.0575 0.395 B_Naive1 L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.65e-01 -0.0519 0.071 0.395 B_Naive1 L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 5.83e-01 0.05 0.091 0.395 B_Naive2 L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 7.24e-01 0.0266 0.0751 0.395 B_Naive2 L2
ENSG00000134644 PUM1 -461844 sc-eQTL 2.70e-01 -0.081 0.0733 0.395 B_Naive2 L2
ENSG00000162510 MATN1 -119438 sc-eQTL 3.56e-01 0.0652 0.0705 0.395 B_Naive2 L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.96e-01 -0.0501 0.0478 0.395 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 4.59e-01 -0.0517 0.0697 0.395 B_Naive2 L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.89e-01 -0.0649 0.0753 0.395 B_Naive2 L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 8.73e-01 0.0146 0.0911 0.393 CD4_CTL L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.43e-01 -0.00645 0.0896 0.393 CD4_CTL L2
ENSG00000134644 PUM1 -461844 sc-eQTL 5.45e-02 -0.168 0.087 0.393 CD4_CTL L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 7.07e-01 0.0295 0.0783 0.393 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 3.67e-01 0.0773 0.0855 0.393 CD4_CTL L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 1.81e-01 -0.101 0.0753 0.393 CD4_CTL L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 2.63e-01 -0.0794 0.0707 0.395 CD4_Naive L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.82e-01 -0.0258 0.0628 0.395 CD4_Naive L2
ENSG00000134644 PUM1 -461844 sc-eQTL 9.09e-01 0.00574 0.0502 0.395 CD4_Naive L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 3.21e-02 -0.115 0.0532 0.395 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 5.15e-01 0.0355 0.0545 0.395 CD4_Naive L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 5.26e-01 -0.0397 0.0626 0.395 CD4_Naive L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 2.55e-01 0.102 0.0895 0.395 CD4_TCM L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 4.92e-02 0.142 0.0717 0.395 CD4_TCM L2
ENSG00000134644 PUM1 -461844 sc-eQTL 9.83e-01 0.0014 0.0641 0.395 CD4_TCM L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 1.97e-02 -0.123 0.0525 0.395 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 2.07e-01 -0.085 0.0672 0.395 CD4_TCM L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 6.08e-01 -0.0386 0.0751 0.395 CD4_TCM L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.21e-01 0.0318 0.0889 0.395 CD4_TEM L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 3.19e-01 -0.0844 0.0846 0.395 CD4_TEM L2
ENSG00000134644 PUM1 -461844 sc-eQTL 5.85e-01 -0.0386 0.0706 0.395 CD4_TEM L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.33e-01 -0.0341 0.0714 0.395 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 6.41e-01 -0.039 0.0835 0.395 CD4_TEM L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 2.05e-01 -0.104 0.082 0.395 CD4_TEM L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.87e-01 0.00152 0.0962 0.395 CD8_CTL L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.52e-01 -0.0333 0.0738 0.395 CD8_CTL L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.91e-01 -0.00985 0.0717 0.395 CD8_CTL L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 3.75e-01 -0.0705 0.0792 0.395 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 3.31e-01 0.0811 0.0832 0.395 CD8_CTL L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 1.32e-01 0.118 0.078 0.395 CD8_CTL L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 6.96e-01 -0.0349 0.0893 0.395 CD8_Naive L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.70e-01 0.0329 0.077 0.395 CD8_Naive L2
ENSG00000134644 PUM1 -461844 sc-eQTL 9.88e-02 -0.102 0.0616 0.395 CD8_Naive L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.28e-02 -0.135 0.0587 0.395 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 3.50e-01 0.0693 0.074 0.395 CD8_Naive L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.08e-01 -0.0822 0.0805 0.395 CD8_Naive L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 5.26e-01 0.0627 0.0986 0.394 CD8_TCM L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 2.08e-01 0.114 0.0901 0.394 CD8_TCM L2
ENSG00000134644 PUM1 -461844 sc-eQTL 2.36e-01 0.101 0.0848 0.394 CD8_TCM L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 7.34e-01 -0.0303 0.089 0.394 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 1.90e-01 0.108 0.0821 0.394 CD8_TCM L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 1.11e-01 0.133 0.0828 0.394 CD8_TCM L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.46e-01 0.0303 0.0934 0.393 CD8_TEM L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 3.35e-01 -0.0863 0.0893 0.393 CD8_TEM L2
ENSG00000134644 PUM1 -461844 sc-eQTL 5.25e-01 -0.0582 0.0914 0.393 CD8_TEM L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 4.86e-01 0.06 0.0859 0.393 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 6.06e-01 -0.0461 0.0893 0.393 CD8_TEM L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.85e-01 0.0702 0.0807 0.393 CD8_TEM L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 1.92e-01 0.123 0.0939 0.392 MAIT L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 3.74e-01 -0.0743 0.0834 0.392 MAIT L2
ENSG00000134644 PUM1 -461844 sc-eQTL 1.18e-01 0.125 0.0796 0.392 MAIT L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.46e-02 -0.139 0.0749 0.392 MAIT L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 5.55e-01 0.0496 0.0841 0.392 MAIT L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 5.48e-01 0.0521 0.0866 0.392 MAIT L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 3.32e-01 -0.0943 0.0969 0.389 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.23e-01 -0.00793 0.0821 0.389 NK_CD56bright L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.61e-01 0.0151 0.0862 0.389 NK_CD56bright L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.76e-01 -0.0356 0.085 0.389 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 1.70e-01 0.117 0.0851 0.389 NK_CD56bright L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.77e-01 -0.06 0.0841 0.389 NK_CD56bright L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 5.19e-01 -0.0597 0.0925 0.397 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 2.56e-01 0.0777 0.0683 0.397 NK_CD56dim L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.38e-01 0.0143 0.0702 0.397 NK_CD56dim L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 9.24e-01 -0.00718 0.0749 0.397 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.85e-01 -0.0256 0.0938 0.397 NK_CD56dim L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 1.50e-01 -0.111 0.077 0.397 NK_CD56dim L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 2.70e-01 0.106 0.0962 0.393 NK_HLA L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.10e-01 -0.00975 0.0861 0.393 NK_HLA L2
ENSG00000134644 PUM1 -461844 sc-eQTL 3.55e-01 -0.0776 0.0837 0.393 NK_HLA L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 5.60e-01 -0.0467 0.08 0.393 NK_HLA L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 9.86e-01 0.00154 0.0852 0.393 NK_HLA L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 8.72e-01 0.0133 0.0824 0.393 NK_HLA L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 3.11e-01 -0.0903 0.089 0.397 NK_cytokine L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 2.78e-01 -0.0755 0.0694 0.397 NK_cytokine L2
ENSG00000134644 PUM1 -461844 sc-eQTL 7.72e-01 -0.0218 0.0753 0.397 NK_cytokine L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 5.42e-01 -0.0506 0.0828 0.397 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 9.09e-01 -0.0101 0.0878 0.397 NK_cytokine L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 7.53e-01 -0.0258 0.0817 0.397 NK_cytokine L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.04e-01 -0.093 0.111 0.374 PB L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 1.91e-01 0.168 0.128 0.374 PB L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.05e-01 0.0277 0.112 0.374 PB L2
ENSG00000162510 MATN1 -119438 sc-eQTL 7.43e-01 0.0344 0.104 0.374 PB L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 8.95e-01 0.00988 0.0747 0.374 PB L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 4.57e-01 -0.0761 0.102 0.374 PB L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.68e-02 0.215 0.107 0.374 PB L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 8.64e-01 0.0123 0.0717 0.396 Pro_T L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.17e-01 -0.00953 0.091 0.396 Pro_T L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.00e-01 0.0215 0.0849 0.396 Pro_T L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 5.55e-01 0.036 0.0608 0.396 Pro_T L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.12e-01 -0.0315 0.085 0.396 Pro_T L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 9.27e-01 0.00721 0.0782 0.396 Pro_T L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.84e-02 0.152 0.0915 0.395 Treg L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 9.18e-01 -0.00916 0.0891 0.395 Treg L2
ENSG00000134644 PUM1 -461844 sc-eQTL 7.08e-01 -0.0268 0.0713 0.395 Treg L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 4.39e-02 -0.164 0.0809 0.395 Treg L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.54e-01 0.0262 0.0832 0.395 Treg L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 7.97e-01 -0.0214 0.0831 0.395 Treg L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.74e-01 -0.0266 0.0927 0.388 cDC L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 3.39e-01 -0.096 0.1 0.388 cDC L2
ENSG00000134644 PUM1 -461844 sc-eQTL 7.08e-01 -0.0323 0.0862 0.388 cDC L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.51e-01 -0.0694 0.0602 0.388 cDC L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 4.92e-02 -0.152 0.0768 0.388 cDC L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 9.19e-01 -0.00777 0.0763 0.388 cDC L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.76e-01 -0.0727 0.0819 0.388 cDC L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.31e-01 -0.058 0.0735 0.395 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.79e-01 -0.0125 0.0821 0.395 cMono_IL1B L2
ENSG00000134644 PUM1 -461844 sc-eQTL 9.70e-02 -0.0921 0.0552 0.395 cMono_IL1B L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 2.73e-01 -0.0534 0.0487 0.395 cMono_IL1B L2
ENSG00000162512 SDC3 -304611 sc-eQTL 2.79e-01 0.0995 0.0917 0.395 cMono_IL1B L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 4.48e-02 -0.186 0.0922 0.395 cMono_IL1B L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 6.16e-01 0.0413 0.0822 0.395 cMono_IL1B L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 6.75e-01 0.0322 0.0767 0.395 cMono_IL1B L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.05e-01 0.0295 0.0777 0.395 cMono_S100A L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.17e-01 0.0213 0.0918 0.395 cMono_S100A L2
ENSG00000134644 PUM1 -461844 sc-eQTL 6.01e-01 -0.0348 0.0663 0.395 cMono_S100A L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.02e-01 -0.0266 0.051 0.395 cMono_S100A L2
ENSG00000162512 SDC3 -304611 sc-eQTL 4.84e-01 -0.0617 0.088 0.395 cMono_S100A L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 2.10e-02 -0.214 0.0921 0.395 cMono_S100A L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 1.00e-01 -0.124 0.0753 0.395 cMono_S100A L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.23e-01 0.0753 0.0759 0.395 cMono_S100A L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.88e-01 -0.0787 0.113 0.4 gdT L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 8.43e-01 0.0194 0.0974 0.4 gdT L2
ENSG00000134644 PUM1 -461844 sc-eQTL 8.66e-03 -0.261 0.098 0.4 gdT L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 7.40e-01 -0.0363 0.109 0.4 gdT L2
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 4.95e-01 -0.0688 0.101 0.4 gdT L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.38e-01 0.0758 0.0974 0.4 gdT L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 2.35e-01 -0.104 0.0874 0.402 intMono L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 3.83e-01 0.0823 0.0941 0.402 intMono L2
ENSG00000134644 PUM1 -461844 sc-eQTL 2.14e-01 0.0993 0.0797 0.402 intMono L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.69e-01 -0.0269 0.0627 0.402 intMono L2
ENSG00000162512 SDC3 -304611 sc-eQTL 8.06e-01 -0.0211 0.0859 0.402 intMono L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 9.52e-01 0.00547 0.09 0.402 intMono L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 4.01e-01 -0.0717 0.0851 0.402 intMono L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 6.13e-01 0.0431 0.0852 0.402 intMono L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 7.63e-01 -0.0244 0.0808 0.391 ncMono L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 7.23e-01 0.0306 0.0861 0.391 ncMono L2
ENSG00000134644 PUM1 -461844 sc-eQTL 9.01e-01 0.00877 0.0704 0.391 ncMono L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 1.28e-01 -0.0971 0.0635 0.391 ncMono L2
ENSG00000162512 SDC3 -304611 sc-eQTL 8.24e-01 0.0159 0.0716 0.391 ncMono L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 9.19e-01 -0.00799 0.0782 0.391 ncMono L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 8.28e-01 -0.017 0.0781 0.391 ncMono L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 5.12e-01 -0.0531 0.0809 0.391 ncMono L2
ENSG00000060688 SNRNP40 -692641 sc-eQTL 9.35e-01 0.00755 0.093 0.395 pDC L2
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 7.11e-01 -0.0378 0.102 0.395 pDC L2
ENSG00000134644 PUM1 -461844 sc-eQTL 2.23e-01 -0.103 0.0842 0.395 pDC L2
ENSG00000162511 LAPTM5 -153627 sc-eQTL 4.26e-01 -0.0626 0.0785 0.395 pDC L2
ENSG00000168528 SERINC2 -805418 sc-eQTL 9.04e-01 -0.0115 0.0954 0.395 pDC L2
ENSG00000284543 LINC01226 -902079 sc-eQTL 5.84e-01 0.0406 0.074 0.395 pDC L2
ENSG00000287510 AL137857.1 -127546 sc-eQTL 8.11e-01 0.0209 0.0871 0.395 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.78e-01 -0.0649 0.0914 0.395 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 7.84e-01 -0.0208 0.0761 0.395 B_Memory LOneK1K
ENSG00000134644 PUM1 -461844 sc-eQTL 3.78e-01 -0.0595 0.0673 0.395 B_Memory LOneK1K
ENSG00000162510 MATN1 -119438 sc-eQTL 8.14e-01 0.0182 0.0769 0.395 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.35e-01 -0.023 0.0483 0.395 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.27e-01 -0.0223 0.0639 0.395 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.24e-01 -0.0687 0.0695 0.395 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -692641 sc-eQTL 5.22e-01 -0.0531 0.0827 0.395 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 7.74e-01 0.0188 0.0654 0.395 B_Naive LOneK1K
ENSG00000134644 PUM1 -461844 sc-eQTL 5.78e-01 -0.0344 0.0619 0.395 B_Naive LOneK1K
ENSG00000162510 MATN1 -119438 sc-eQTL 7.35e-01 0.0202 0.0596 0.395 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -153627 sc-eQTL 1.38e-01 -0.0622 0.0417 0.395 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 8.54e-01 0.00997 0.0542 0.395 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -127546 sc-eQTL 4.22e-01 -0.0517 0.0643 0.395 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -692641 sc-eQTL 8.06e-01 -0.0172 0.0701 0.395 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.33e-01 -0.038 0.0794 0.395 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -461844 sc-eQTL 9.16e-02 -0.0853 0.0503 0.395 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -153627 sc-eQTL 1.55e-01 -0.0633 0.0443 0.395 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -304611 sc-eQTL 6.12e-01 0.0461 0.0908 0.395 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -805418 sc-eQTL 4.43e-02 -0.187 0.0926 0.395 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -902079 sc-eQTL 7.91e-01 -0.0204 0.0766 0.395 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -127546 sc-eQTL 3.97e-01 0.0608 0.0716 0.395 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -692641 sc-eQTL 4.42e-01 -0.0592 0.0769 0.399 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 2.37e-01 0.0996 0.084 0.399 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -461844 sc-eQTL 4.59e-01 0.0511 0.0689 0.399 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -153627 sc-eQTL 6.14e-02 -0.103 0.0547 0.399 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -304611 sc-eQTL 7.67e-01 0.0239 0.0806 0.399 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -805418 sc-eQTL 7.70e-01 -0.0245 0.0836 0.399 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -902079 sc-eQTL 4.68e-01 -0.0577 0.0793 0.399 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -127546 sc-eQTL 7.64e-01 -0.0239 0.0795 0.399 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -692641 sc-eQTL 3.46e-01 -0.0831 0.0881 0.397 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -692835 sc-eQTL 6.90e-01 -0.0241 0.0603 0.397 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -461844 sc-eQTL 7.85e-01 -0.018 0.066 0.397 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -153627 sc-eQTL 7.69e-01 -0.0217 0.0738 0.397 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -114357 sc-eQTL 7.96e-01 -0.0221 0.0851 0.397 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -127546 sc-eQTL 2.06e-01 -0.0929 0.0732 0.397 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -692641 eQTL 0.0331 -0.0365 0.0171 0.0 0.0 0.396

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina