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Genes within 1Mb (chr1:30588654:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.09e-01 -0.054 0.0817 0.692 B L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 1.00e+00 -3.87e-05 0.0655 0.692 B L1
ENSG00000134644 PUM1 -477337 sc-eQTL 6.00e-01 0.0289 0.0549 0.692 B L1
ENSG00000162510 MATN1 -134931 sc-eQTL 5.56e-01 -0.0341 0.0578 0.692 B L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.69e-01 -0.0258 0.0452 0.692 B L1
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.05e-01 0.0201 0.053 0.692 B L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 5.19e-01 -0.0405 0.0627 0.692 B L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.34e-01 0.0437 0.0702 0.692 CD4T L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.02e-01 0.00678 0.0549 0.692 CD4T L1
ENSG00000134644 PUM1 -477337 sc-eQTL 1.45e-01 -0.0712 0.0486 0.692 CD4T L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.64e-01 -0.0313 0.0541 0.692 CD4T L1
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 1.91e-01 0.0633 0.0483 0.692 CD4T L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 8.15e-01 0.0136 0.058 0.692 CD4T L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.91e-01 0.0497 0.0924 0.692 CD8T L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 5.34e-01 0.0383 0.0615 0.692 CD8T L1
ENSG00000134644 PUM1 -477337 sc-eQTL 3.01e-01 -0.0561 0.0541 0.692 CD8T L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 6.57e-01 -0.0234 0.0526 0.692 CD8T L1
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 2.78e-01 0.067 0.0615 0.692 CD8T L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.84e-01 0.083 0.0773 0.692 CD8T L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.96e-01 0.0695 0.0817 0.691 DC L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.47e-01 0.112 0.0966 0.691 DC L1
ENSG00000134644 PUM1 -477337 sc-eQTL 2.82e-01 0.0816 0.0757 0.691 DC L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.16e-01 -0.0544 0.0541 0.691 DC L1
ENSG00000168528 SERINC2 -820911 sc-eQTL 3.82e-01 -0.0782 0.0892 0.691 DC L1
ENSG00000284543 LINC01226 -917572 sc-eQTL 5.69e-01 -0.0337 0.0592 0.691 DC L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 3.79e-01 -0.0755 0.0856 0.691 DC L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.90e-01 -0.0546 0.0634 0.692 Mono L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.64e-01 0.00359 0.0788 0.692 Mono L1
ENSG00000134644 PUM1 -477337 sc-eQTL 1.23e-01 -0.0778 0.0502 0.692 Mono L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 7.99e-02 -0.0811 0.0461 0.692 Mono L1
ENSG00000162512 SDC3 -320104 sc-eQTL 1.31e-01 0.135 0.0888 0.692 Mono L1
ENSG00000168528 SERINC2 -820911 sc-eQTL 7.53e-01 0.0302 0.0958 0.692 Mono L1
ENSG00000284543 LINC01226 -917572 sc-eQTL 8.65e-01 0.0144 0.0844 0.692 Mono L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.95e-01 0.0772 0.0735 0.692 Mono L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 8.23e-01 0.0201 0.0897 0.691 NK L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.69e-01 -0.0552 0.0613 0.691 NK L1
ENSG00000134644 PUM1 -477337 sc-eQTL 2.48e-01 -0.0743 0.0642 0.691 NK L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 6.15e-01 0.0373 0.0741 0.691 NK L1
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 2.93e-01 0.0876 0.0831 0.691 NK L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.50e-01 0.111 0.0766 0.691 NK L1
ENSG00000060688 SNRNP40 -708134 sc-eQTL 7.62e-01 0.0204 0.0672 0.692 Other_T L1
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.53e-01 0.0667 0.0717 0.692 Other_T L1
ENSG00000134644 PUM1 -477337 sc-eQTL 7.11e-01 -0.024 0.0645 0.692 Other_T L1
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.54e-01 -0.0313 0.0529 0.692 Other_T L1
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 6.33e-01 -0.0414 0.0866 0.692 Other_T L1
ENSG00000287510 AL137857.1 -143039 sc-eQTL 5.47e-01 0.0545 0.0902 0.692 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -708134 sc-eQTL 6.37e-01 -0.0513 0.109 0.704 B_Activated L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 4.98e-01 0.0745 0.11 0.704 B_Activated L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.42e-01 0.0623 0.102 0.704 B_Activated L2
ENSG00000162510 MATN1 -134931 sc-eQTL 8.94e-01 -0.0118 0.0891 0.704 B_Activated L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 8.90e-01 0.00864 0.0622 0.704 B_Activated L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.25e-01 0.0353 0.1 0.704 B_Activated L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 9.32e-01 0.00759 0.0888 0.704 B_Activated L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.57e-01 0.0924 0.1 0.691 B_Intermediate L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.70e-01 -0.0923 0.0834 0.691 B_Intermediate L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.41e-01 -0.0483 0.0788 0.691 B_Intermediate L2
ENSG00000162510 MATN1 -134931 sc-eQTL 6.06e-01 -0.0424 0.082 0.691 B_Intermediate L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 1.44e-01 -0.0735 0.0501 0.691 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.90e-01 0.0189 0.0707 0.691 B_Intermediate L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 6.29e-02 -0.147 0.0785 0.691 B_Intermediate L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 1.24e-01 -0.149 0.0966 0.69 B_Memory L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 4.92e-01 0.0615 0.0894 0.69 B_Memory L2
ENSG00000134644 PUM1 -477337 sc-eQTL 6.11e-01 -0.0396 0.0778 0.69 B_Memory L2
ENSG00000162510 MATN1 -134931 sc-eQTL 4.30e-01 -0.0588 0.0744 0.69 B_Memory L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.76e-01 -0.0585 0.0659 0.69 B_Memory L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 1.58e-01 -0.107 0.0752 0.69 B_Memory L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 5.10e-01 -0.0584 0.0884 0.69 B_Memory L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 2.63e-01 -0.099 0.0882 0.692 B_Naive1 L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.47e-01 0.0883 0.0761 0.692 B_Naive1 L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.13e-02 0.131 0.0668 0.692 B_Naive1 L2
ENSG00000162510 MATN1 -134931 sc-eQTL 7.11e-01 -0.0254 0.0683 0.692 B_Naive1 L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.10e-01 -0.0464 0.0455 0.692 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 3.12e-01 0.0607 0.0598 0.692 B_Naive1 L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 7.63e-01 -0.0224 0.0741 0.692 B_Naive1 L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 1.85e-01 0.128 0.0964 0.691 B_Naive2 L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 4.81e-01 0.0563 0.0798 0.691 B_Naive2 L2
ENSG00000134644 PUM1 -477337 sc-eQTL 4.87e-01 -0.0544 0.0781 0.691 B_Naive2 L2
ENSG00000162510 MATN1 -134931 sc-eQTL 6.66e-01 -0.0324 0.075 0.691 B_Naive2 L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 4.13e-01 -0.0417 0.0509 0.691 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 5.62e-01 -0.0431 0.0741 0.691 B_Naive2 L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 8.51e-01 0.0151 0.0802 0.691 B_Naive2 L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.94e-01 0.0804 0.0943 0.695 CD4_CTL L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.55e-01 0.0052 0.0929 0.695 CD4_CTL L2
ENSG00000134644 PUM1 -477337 sc-eQTL 6.54e-02 -0.167 0.0903 0.695 CD4_CTL L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 1.95e-01 0.105 0.0808 0.695 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 2.71e-01 -0.0978 0.0885 0.695 CD4_CTL L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.50e-01 -0.0902 0.0781 0.695 CD4_CTL L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 9.77e-01 0.00213 0.0728 0.692 CD4_Naive L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.69e-01 0.00248 0.0645 0.692 CD4_Naive L2
ENSG00000134644 PUM1 -477337 sc-eQTL 4.98e-01 -0.0349 0.0515 0.692 CD4_Naive L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.32e-01 -0.0345 0.0552 0.692 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 5.71e-02 0.106 0.0556 0.692 CD4_Naive L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 4.23e-01 0.0516 0.0643 0.692 CD4_Naive L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.11e-01 0.0933 0.092 0.692 CD4_TCM L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.80e-01 0.0803 0.0741 0.692 CD4_TCM L2
ENSG00000134644 PUM1 -477337 sc-eQTL 6.34e-01 -0.0314 0.0657 0.692 CD4_TCM L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.01e-01 -0.0565 0.0544 0.692 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 6.30e-01 -0.0333 0.0692 0.692 CD4_TCM L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 7.64e-01 -0.0231 0.0771 0.692 CD4_TCM L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 9.15e-01 0.00979 0.0921 0.692 CD4_TEM L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.37e-02 -0.186 0.0868 0.692 CD4_TEM L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.37e-01 -0.0452 0.073 0.692 CD4_TEM L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.85e-01 0.0404 0.0739 0.692 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 6.97e-01 0.0337 0.0865 0.692 CD4_TEM L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.30e-01 -0.129 0.0848 0.692 CD4_TEM L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.46e-01 0.061 0.101 0.692 CD8_CTL L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 5.72e-01 0.0439 0.0774 0.692 CD8_CTL L2
ENSG00000134644 PUM1 -477337 sc-eQTL 4.70e-01 -0.0543 0.0752 0.692 CD8_CTL L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 9.85e-01 0.00156 0.0833 0.692 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 1.69e-01 0.12 0.0872 0.692 CD8_CTL L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 4.46e-01 0.0628 0.0823 0.692 CD8_CTL L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.61e-01 -0.0535 0.0918 0.692 CD8_Naive L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 6.34e-01 0.0378 0.0792 0.692 CD8_Naive L2
ENSG00000134644 PUM1 -477337 sc-eQTL 1.19e-01 -0.0994 0.0634 0.692 CD8_Naive L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.98e-02 -0.125 0.0605 0.692 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 9.19e-02 0.128 0.0758 0.692 CD8_Naive L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 5.56e-01 0.049 0.083 0.692 CD8_Naive L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 7.83e-03 0.267 0.0993 0.694 CD8_TCM L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.36e-01 0.0074 0.0927 0.694 CD8_TCM L2
ENSG00000134644 PUM1 -477337 sc-eQTL 6.65e-01 0.0378 0.0871 0.694 CD8_TCM L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.77e-01 0.0509 0.0911 0.694 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 6.77e-01 0.0351 0.0844 0.694 CD8_TCM L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 9.10e-01 0.0097 0.0853 0.694 CD8_TCM L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.71e-01 -0.0854 0.0952 0.689 CD8_TEM L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.33e-01 0.0886 0.0913 0.689 CD8_TEM L2
ENSG00000134644 PUM1 -477337 sc-eQTL 7.07e-01 0.0352 0.0935 0.689 CD8_TEM L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 3.04e-01 0.0904 0.0877 0.689 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 8.63e-01 -0.0158 0.0913 0.689 CD8_TEM L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 8.21e-01 -0.0187 0.0826 0.689 CD8_TEM L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.16e-01 0.097 0.0965 0.695 MAIT L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 7.88e-02 0.15 0.085 0.695 MAIT L2
ENSG00000134644 PUM1 -477337 sc-eQTL 7.04e-01 0.0312 0.0821 0.695 MAIT L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.78e-01 -0.0841 0.0773 0.695 MAIT L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.24e-01 -0.0305 0.0863 0.695 MAIT L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 9.73e-01 0.00306 0.0889 0.695 MAIT L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 4.59e-01 -0.0738 0.0994 0.687 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.22e-01 -0.103 0.0838 0.687 NK_CD56bright L2
ENSG00000134644 PUM1 -477337 sc-eQTL 8.31e-01 0.0189 0.0884 0.687 NK_CD56bright L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 4.05e-01 0.0726 0.087 0.687 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 4.20e-01 0.0706 0.0874 0.687 NK_CD56bright L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.46e-01 0.125 0.0858 0.687 NK_CD56bright L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 1.70e-01 0.13 0.0946 0.69 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.88e-01 -0.0606 0.0702 0.69 NK_CD56dim L2
ENSG00000134644 PUM1 -477337 sc-eQTL 1.96e-01 -0.0931 0.0718 0.69 NK_CD56dim L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 6.54e-01 0.0345 0.0769 0.69 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 6.33e-01 0.046 0.0963 0.69 NK_CD56dim L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 6.79e-01 0.0329 0.0794 0.69 NK_CD56dim L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 4.41e-01 -0.0774 0.1 0.689 NK_HLA L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.08e-02 0.151 0.0891 0.689 NK_HLA L2
ENSG00000134644 PUM1 -477337 sc-eQTL 3.66e-01 -0.0791 0.0873 0.689 NK_HLA L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 6.02e-01 0.0436 0.0834 0.689 NK_HLA L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 5.67e-01 -0.0509 0.0888 0.689 NK_HLA L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 8.85e-02 0.146 0.0853 0.689 NK_HLA L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 9.37e-01 -0.00733 0.0921 0.69 NK_cytokine L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 1.75e-01 -0.0973 0.0716 0.69 NK_cytokine L2
ENSG00000134644 PUM1 -477337 sc-eQTL 9.65e-01 0.00339 0.0777 0.69 NK_cytokine L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.57e-01 0.0503 0.0855 0.69 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 2.00e-01 0.116 0.0903 0.69 NK_cytokine L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.40e-01 0.0992 0.0841 0.69 NK_cytokine L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 4.93e-01 -0.0737 0.107 0.667 PB L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.44e-01 0.145 0.124 0.667 PB L2
ENSG00000134644 PUM1 -477337 sc-eQTL 8.64e-01 -0.0185 0.108 0.667 PB L2
ENSG00000162510 MATN1 -134931 sc-eQTL 8.70e-01 -0.0166 0.101 0.667 PB L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.21e-01 -0.0882 0.0716 0.667 PB L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.22e-01 0.0352 0.0986 0.667 PB L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 7.87e-01 0.0284 0.105 0.667 PB L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 2.11e-01 0.0912 0.0727 0.698 Pro_T L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.44e-01 0.0876 0.0924 0.698 Pro_T L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.44e-01 0.0524 0.0863 0.698 Pro_T L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.18e-01 0.0762 0.0617 0.698 Pro_T L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 4.94e-01 0.0592 0.0865 0.698 Pro_T L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 3.69e-01 0.0715 0.0795 0.698 Pro_T L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.61e-01 0.0871 0.0951 0.692 Treg L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 6.20e-01 -0.0458 0.0921 0.692 Treg L2
ENSG00000134644 PUM1 -477337 sc-eQTL 6.82e-02 -0.134 0.0732 0.692 Treg L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 6.88e-01 -0.0339 0.0845 0.692 Treg L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 3.18e-01 0.086 0.0859 0.692 Treg L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 9.24e-02 -0.144 0.0854 0.692 Treg L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.27e-01 0.0594 0.0938 0.688 cDC L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 7.08e-01 0.0381 0.102 0.688 cDC L2
ENSG00000134644 PUM1 -477337 sc-eQTL 8.51e-01 0.0164 0.0873 0.688 cDC L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.81e-01 -0.0659 0.061 0.688 cDC L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 3.58e-01 -0.0723 0.0784 0.688 cDC L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 2.34e-02 0.174 0.0761 0.688 cDC L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.87e-01 -0.0884 0.0828 0.688 cDC L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.93e-01 -0.0407 0.0759 0.692 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.32e-01 0.00719 0.0848 0.692 cMono_IL1B L2
ENSG00000134644 PUM1 -477337 sc-eQTL 7.62e-02 -0.101 0.0569 0.692 cMono_IL1B L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.76e-02 -0.0953 0.0499 0.692 cMono_IL1B L2
ENSG00000162512 SDC3 -320104 sc-eQTL 2.50e-01 0.109 0.0946 0.692 cMono_IL1B L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 7.46e-01 0.0312 0.096 0.692 cMono_IL1B L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 7.52e-01 0.0268 0.0849 0.692 cMono_IL1B L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 4.79e-01 0.0561 0.0791 0.692 cMono_IL1B L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 8.14e-01 -0.0189 0.0802 0.692 cMono_S100A L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 8.45e-01 -0.0185 0.0947 0.692 cMono_S100A L2
ENSG00000134644 PUM1 -477337 sc-eQTL 2.73e-01 -0.075 0.0683 0.692 cMono_S100A L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 4.44e-01 -0.0403 0.0526 0.692 cMono_S100A L2
ENSG00000162512 SDC3 -320104 sc-eQTL 3.91e-01 0.078 0.0908 0.692 cMono_S100A L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 7.82e-01 -0.0266 0.0963 0.692 cMono_S100A L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 2.37e-01 -0.0924 0.0779 0.692 cMono_S100A L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.39e-01 0.0924 0.0783 0.692 cMono_S100A L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 6.96e-01 -0.0458 0.117 0.673 gdT L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 3.50e-02 -0.211 0.0991 0.673 gdT L2
ENSG00000134644 PUM1 -477337 sc-eQTL 7.27e-01 0.0362 0.104 0.673 gdT L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 9.06e-01 -0.0133 0.113 0.673 gdT L2
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 4.23e-01 0.0835 0.104 0.673 gdT L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.95e-01 0.13 0.1 0.673 gdT L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 4.82e-01 -0.0633 0.0897 0.691 intMono L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.55e-01 -0.00545 0.0966 0.691 intMono L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.68e-01 0.0468 0.0819 0.691 intMono L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.36e-01 -0.0762 0.0641 0.691 intMono L2
ENSG00000162512 SDC3 -320104 sc-eQTL 2.63e-01 0.0985 0.0877 0.691 intMono L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 8.35e-01 0.0193 0.0921 0.691 intMono L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 9.96e-01 0.000459 0.0873 0.691 intMono L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.82e-01 0.116 0.0869 0.691 intMono L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 8.89e-01 -0.0116 0.083 0.69 ncMono L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 8.39e-01 -0.018 0.0885 0.69 ncMono L2
ENSG00000134644 PUM1 -477337 sc-eQTL 5.90e-01 0.039 0.0723 0.69 ncMono L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 4.88e-01 -0.0455 0.0656 0.69 ncMono L2
ENSG00000162512 SDC3 -320104 sc-eQTL 3.34e-02 0.156 0.0728 0.69 ncMono L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 9.62e-01 0.00384 0.0804 0.69 ncMono L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 8.51e-01 0.0151 0.0803 0.69 ncMono L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 8.18e-01 0.0192 0.0832 0.69 ncMono L2
ENSG00000060688 SNRNP40 -708134 sc-eQTL 1.90e-01 0.124 0.0944 0.689 pDC L2
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.23e-01 -0.01 0.104 0.689 pDC L2
ENSG00000134644 PUM1 -477337 sc-eQTL 9.27e-01 -0.00789 0.0863 0.689 pDC L2
ENSG00000162511 LAPTM5 -169120 sc-eQTL 4.22e-01 -0.0644 0.0801 0.689 pDC L2
ENSG00000168528 SERINC2 -820911 sc-eQTL 8.05e-01 -0.0241 0.0973 0.689 pDC L2
ENSG00000284543 LINC01226 -917572 sc-eQTL 5.75e-01 -0.0424 0.0755 0.689 pDC L2
ENSG00000287510 AL137857.1 -143039 sc-eQTL 4.48e-01 0.0675 0.0887 0.689 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -708134 sc-eQTL 4.98e-01 -0.0646 0.0953 0.692 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 4.97e-01 -0.0539 0.0793 0.692 B_Memory LOneK1K
ENSG00000134644 PUM1 -477337 sc-eQTL 3.47e-01 -0.0661 0.0702 0.692 B_Memory LOneK1K
ENSG00000162510 MATN1 -134931 sc-eQTL 2.87e-01 -0.0855 0.08 0.692 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.34e-01 -0.0314 0.0503 0.692 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 7.50e-01 -0.0213 0.0666 0.692 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -143039 sc-eQTL 3.36e-01 -0.0698 0.0725 0.692 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -708134 sc-eQTL 5.98e-01 -0.0457 0.0867 0.692 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 5.72e-01 0.0388 0.0685 0.692 B_Naive LOneK1K
ENSG00000134644 PUM1 -477337 sc-eQTL 8.41e-01 0.013 0.0648 0.692 B_Naive LOneK1K
ENSG00000162510 MATN1 -134931 sc-eQTL 9.06e-01 -0.00739 0.0624 0.692 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -169120 sc-eQTL 1.16e-01 -0.069 0.0437 0.692 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 2.67e-01 0.0629 0.0566 0.692 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -143039 sc-eQTL 5.55e-01 -0.0399 0.0674 0.692 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -708134 sc-eQTL 3.79e-01 -0.0635 0.0721 0.692 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 8.91e-01 -0.0112 0.0818 0.692 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -477337 sc-eQTL 7.55e-02 -0.0925 0.0518 0.692 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.34e-02 -0.0883 0.0454 0.692 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -320104 sc-eQTL 2.82e-01 0.101 0.0933 0.692 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -820911 sc-eQTL 8.98e-01 0.0124 0.0962 0.692 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -917572 sc-eQTL 9.73e-01 -0.00266 0.0789 0.692 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -143039 sc-eQTL 2.18e-01 0.091 0.0736 0.692 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -708134 sc-eQTL 6.73e-01 -0.0339 0.0803 0.694 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 9.51e-01 0.00545 0.0879 0.694 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -477337 sc-eQTL 7.75e-01 0.0206 0.072 0.694 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -169120 sc-eQTL 2.63e-01 -0.0644 0.0574 0.694 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -320104 sc-eQTL 2.05e-01 0.107 0.0838 0.694 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -820911 sc-eQTL 8.66e-01 0.0148 0.0872 0.694 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -917572 sc-eQTL 9.74e-01 0.00267 0.0828 0.694 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -143039 sc-eQTL 4.06e-01 0.0689 0.0828 0.694 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -708134 sc-eQTL 6.90e-01 0.0361 0.0903 0.69 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -708328 sc-eQTL 2.50e-01 -0.071 0.0615 0.69 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -477337 sc-eQTL 2.07e-01 -0.0852 0.0673 0.69 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -169120 sc-eQTL 5.70e-01 0.0429 0.0755 0.69 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -129850 sc-eQTL 4.08e-01 0.072 0.087 0.69 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -143039 sc-eQTL 1.67e-01 0.104 0.0748 0.69 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -129850 eQTL 4.42e-02 0.0277 0.0137 0.0 0.0 0.271

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -917627 2.76e-07 1.27e-07 5.35e-08 1.82e-07 1.01e-07 9.91e-08 1.61e-07 5.53e-08 1.45e-07 5.67e-08 1.52e-07 1.01e-07 1.52e-07 7.13e-08 6.12e-08 7.5e-08 4.01e-08 1.4e-07 6.07e-08 4.3e-08 1.22e-07 1.24e-07 1.45e-07 2.64e-08 1.55e-07 1.25e-07 1.1e-07 9.74e-08 1.2e-07 1e-07 1.02e-07 2.9e-08 3.96e-08 8.11e-08 5.99e-08 3.04e-08 5.37e-08 8.72e-08 6.63e-08 3.92e-08 5.34e-08 1.33e-07 5.21e-08 1.07e-08 3.42e-08 1.89e-08 1.21e-07 1.88e-09 4.99e-08