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Genes within 1Mb (chr1:30576039:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.68e-01 0.0239 0.0809 0.594 B L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.81e-01 -0.00972 0.0648 0.594 B L1
ENSG00000134644 PUM1 -489952 sc-eQTL 3.16e-01 0.0545 0.0543 0.594 B L1
ENSG00000162510 MATN1 -147546 sc-eQTL 6.57e-01 -0.0254 0.0572 0.594 B L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 2.90e-01 -0.0474 0.0447 0.594 B L1
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.49e-01 -0.0604 0.0523 0.594 B L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.20e-01 -0.00628 0.0621 0.594 B L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 9.40e-01 0.00528 0.0699 0.594 CD4T L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.29e-01 -0.0344 0.0546 0.594 CD4T L1
ENSG00000134644 PUM1 -489952 sc-eQTL 2.08e-01 0.0612 0.0485 0.594 CD4T L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.57e-01 -0.00973 0.0539 0.594 CD4T L1
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.64e-01 -0.0538 0.0481 0.594 CD4T L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.72e-01 0.0245 0.0577 0.594 CD4T L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.18e-01 -0.0593 0.0916 0.594 CD8T L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 3.48e-01 -0.0573 0.0609 0.594 CD8T L1
ENSG00000134644 PUM1 -489952 sc-eQTL 6.29e-01 0.026 0.0537 0.594 CD8T L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 9.98e-02 -0.0857 0.0518 0.594 CD8T L1
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 5.75e-02 -0.116 0.0606 0.594 CD8T L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 4.37e-01 -0.0597 0.0767 0.594 CD8T L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.37e-01 -0.0779 0.081 0.597 DC L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 3.16e-02 -0.206 0.0951 0.597 DC L1
ENSG00000134644 PUM1 -489952 sc-eQTL 7.78e-01 -0.0213 0.0753 0.597 DC L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.95e-01 0.0367 0.0537 0.597 DC L1
ENSG00000168528 SERINC2 -833526 sc-eQTL 5.83e-02 0.167 0.0879 0.597 DC L1
ENSG00000284543 LINC01226 -930187 sc-eQTL 6.05e-01 0.0304 0.0587 0.597 DC L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 4.08e-01 0.0705 0.0849 0.597 DC L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.26e-01 0.0223 0.0636 0.594 Mono L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.28e-01 0.00717 0.0788 0.594 Mono L1
ENSG00000134644 PUM1 -489952 sc-eQTL 1.98e-02 0.117 0.0499 0.594 Mono L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 1.59e-01 0.0654 0.0463 0.594 Mono L1
ENSG00000162512 SDC3 -332719 sc-eQTL 1.62e-01 -0.125 0.0889 0.594 Mono L1
ENSG00000168528 SERINC2 -833526 sc-eQTL 7.19e-02 0.172 0.0951 0.594 Mono L1
ENSG00000284543 LINC01226 -930187 sc-eQTL 1.01e-01 0.138 0.0839 0.594 Mono L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.27e-01 -0.0161 0.0738 0.594 Mono L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.21e-02 0.191 0.0885 0.594 NK L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 3.33e-01 0.0593 0.0611 0.594 NK L1
ENSG00000134644 PUM1 -489952 sc-eQTL 4.52e-01 0.0483 0.0641 0.594 NK L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 6.91e-01 -0.0294 0.0739 0.594 NK L1
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.75e-01 0.0593 0.083 0.594 NK L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.74e-01 0.0121 0.0767 0.594 NK L1
ENSG00000060688 SNRNP40 -720749 sc-eQTL 4.63e-01 -0.0489 0.0666 0.594 Other_T L1
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.92e-01 -0.00967 0.0713 0.594 Other_T L1
ENSG00000134644 PUM1 -489952 sc-eQTL 9.88e-01 0.000985 0.0641 0.594 Other_T L1
ENSG00000162511 LAPTM5 -181735 sc-eQTL 6.06e-01 -0.0271 0.0525 0.594 Other_T L1
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.22e-01 -0.105 0.0857 0.594 Other_T L1
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.46e-01 -0.0412 0.0896 0.594 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.80e-01 0.0943 0.107 0.587 B_Activated L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 4.41e-01 -0.0836 0.108 0.587 B_Activated L2
ENSG00000134644 PUM1 -489952 sc-eQTL 8.04e-01 -0.025 0.101 0.587 B_Activated L2
ENSG00000162510 MATN1 -147546 sc-eQTL 9.97e-01 -0.000319 0.088 0.587 B_Activated L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.78e-01 -0.0435 0.0613 0.587 B_Activated L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.22e-01 0.121 0.0986 0.587 B_Activated L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 1.52e-01 -0.125 0.0871 0.587 B_Activated L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.67e-01 -0.0571 0.0997 0.597 B_Intermediate L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 1.38e-01 0.123 0.0827 0.597 B_Intermediate L2
ENSG00000134644 PUM1 -489952 sc-eQTL 8.44e-01 0.0155 0.0784 0.597 B_Intermediate L2
ENSG00000162510 MATN1 -147546 sc-eQTL 3.94e-01 -0.0696 0.0815 0.597 B_Intermediate L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.40e-01 0.0101 0.0501 0.597 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.09e-01 -0.0581 0.0702 0.597 B_Intermediate L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.72e-02 0.13 0.0782 0.597 B_Intermediate L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 6.94e-01 0.038 0.0962 0.595 B_Memory L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 7.54e-01 0.0278 0.0886 0.595 B_Memory L2
ENSG00000134644 PUM1 -489952 sc-eQTL 1.44e-01 0.113 0.0767 0.595 B_Memory L2
ENSG00000162510 MATN1 -147546 sc-eQTL 5.88e-01 0.04 0.0737 0.595 B_Memory L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.34e-01 0.0137 0.0654 0.595 B_Memory L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 8.37e-01 -0.0154 0.0748 0.595 B_Memory L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.06e-01 -0.0216 0.0876 0.595 B_Memory L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.11e-01 0.0325 0.0878 0.594 B_Naive1 L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.74e-01 -0.0427 0.0758 0.594 B_Naive1 L2
ENSG00000134644 PUM1 -489952 sc-eQTL 8.29e-01 -0.0145 0.0669 0.594 B_Naive1 L2
ENSG00000162510 MATN1 -147546 sc-eQTL 5.27e-01 -0.0429 0.0678 0.594 B_Naive1 L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 5.26e-01 0.0288 0.0453 0.594 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.08e-01 -0.0749 0.0593 0.594 B_Naive1 L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.81e-01 0.00175 0.0735 0.594 B_Naive1 L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.63e-01 -0.0868 0.0952 0.594 B_Naive2 L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.47e-02 -0.151 0.0781 0.594 B_Naive2 L2
ENSG00000134644 PUM1 -489952 sc-eQTL 5.73e-01 0.0435 0.077 0.594 B_Naive2 L2
ENSG00000162510 MATN1 -147546 sc-eQTL 4.84e-01 -0.0518 0.0739 0.594 B_Naive2 L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 7.03e-01 0.0192 0.0502 0.594 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.45e-01 0.085 0.073 0.594 B_Naive2 L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 5.16e-01 0.0514 0.079 0.594 B_Naive2 L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 9.08e-01 -0.0108 0.0933 0.595 CD4_CTL L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.55e-01 0.00515 0.0917 0.595 CD4_CTL L2
ENSG00000134644 PUM1 -489952 sc-eQTL 2.01e-01 0.115 0.0896 0.595 CD4_CTL L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 6.28e-01 -0.0389 0.0802 0.595 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 9.19e-01 0.00894 0.0877 0.595 CD4_CTL L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 1.13e-01 0.122 0.0769 0.595 CD4_CTL L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.90e-01 0.0196 0.0732 0.594 CD4_Naive L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.57e-01 -0.00352 0.0649 0.594 CD4_Naive L2
ENSG00000134644 PUM1 -489952 sc-eQTL 1.00e+00 -1.65e-05 0.0518 0.594 CD4_Naive L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 7.03e-01 -0.0212 0.0555 0.594 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.04e-02 -0.115 0.0558 0.594 CD4_Naive L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 5.96e-01 0.0343 0.0647 0.594 CD4_Naive L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.66e-01 -0.0273 0.0916 0.594 CD4_TCM L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 1.52e-01 -0.106 0.0735 0.594 CD4_TCM L2
ENSG00000134644 PUM1 -489952 sc-eQTL 1.42e-01 0.096 0.0651 0.594 CD4_TCM L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 5.57e-01 0.0319 0.0542 0.594 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 9.00e-01 0.00865 0.0689 0.594 CD4_TCM L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.06e-01 -0.0396 0.0767 0.594 CD4_TCM L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.12e-01 -0.0333 0.0901 0.594 CD4_TEM L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.03e-02 0.168 0.0852 0.594 CD4_TEM L2
ENSG00000134644 PUM1 -489952 sc-eQTL 4.17e-01 0.0581 0.0715 0.594 CD4_TEM L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 7.74e-01 -0.0208 0.0724 0.594 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 7.62e-01 0.0257 0.0847 0.594 CD4_TEM L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 2.17e-01 0.103 0.0832 0.594 CD4_TEM L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.42e-01 -0.0948 0.0996 0.594 CD8_CTL L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.08e-01 0.00886 0.0765 0.594 CD8_CTL L2
ENSG00000134644 PUM1 -489952 sc-eQTL 2.37e-01 0.0878 0.0741 0.594 CD8_CTL L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 1.47e-01 -0.119 0.0819 0.594 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.29e-01 -0.104 0.0862 0.594 CD8_CTL L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 4.68e-01 -0.0591 0.0813 0.594 CD8_CTL L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 4.49e-01 0.0681 0.0897 0.594 CD8_Naive L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 2.23e-01 -0.0944 0.0772 0.594 CD8_Naive L2
ENSG00000134644 PUM1 -489952 sc-eQTL 5.11e-01 0.041 0.0623 0.594 CD8_Naive L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 2.22e-01 0.0729 0.0595 0.594 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 2.73e-01 -0.0817 0.0744 0.594 CD8_Naive L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 5.10e-01 0.0535 0.0811 0.594 CD8_Naive L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.06e-02 -0.181 0.0996 0.597 CD8_TCM L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 6.10e-01 -0.047 0.092 0.597 CD8_TCM L2
ENSG00000134644 PUM1 -489952 sc-eQTL 4.51e-01 -0.0653 0.0864 0.597 CD8_TCM L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 1.10e-01 -0.144 0.09 0.597 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.19e-01 -0.0678 0.0837 0.597 CD8_TCM L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 2.23e-01 -0.103 0.0844 0.597 CD8_TCM L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.36e-01 0.0586 0.0945 0.6 CD8_TEM L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.23e-01 -0.00876 0.0907 0.6 CD8_TEM L2
ENSG00000134644 PUM1 -489952 sc-eQTL 3.11e-01 0.0939 0.0925 0.6 CD8_TEM L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 2.46e-01 -0.101 0.0869 0.6 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 6.48e-01 0.0413 0.0904 0.6 CD8_TEM L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 7.37e-01 -0.0276 0.0819 0.6 CD8_TEM L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 2.31e-01 -0.115 0.0954 0.595 MAIT L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.33e-01 0.0179 0.0848 0.595 MAIT L2
ENSG00000134644 PUM1 -489952 sc-eQTL 4.97e-01 -0.0553 0.0813 0.595 MAIT L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 3.68e-01 0.0691 0.0766 0.595 MAIT L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 3.47e-01 -0.0804 0.0853 0.595 MAIT L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.24e-01 -0.0197 0.0881 0.595 MAIT L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.36e-02 0.21 0.0979 0.602 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.52e-01 -0.00505 0.0837 0.602 NK_CD56bright L2
ENSG00000134644 PUM1 -489952 sc-eQTL 9.50e-01 -0.00556 0.0879 0.602 NK_CD56bright L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 2.01e-01 0.111 0.0863 0.602 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.42e-01 -0.067 0.087 0.602 NK_CD56bright L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 5.96e-01 0.0456 0.0858 0.602 NK_CD56bright L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 1.86e-01 0.124 0.0939 0.597 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.86e-01 0.00996 0.0697 0.597 NK_CD56dim L2
ENSG00000134644 PUM1 -489952 sc-eQTL 7.55e-01 0.0223 0.0715 0.597 NK_CD56dim L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.70e-01 -0.0551 0.0762 0.597 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 8.58e-01 0.0172 0.0955 0.597 NK_CD56dim L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.53e-01 0.0354 0.0788 0.597 NK_CD56dim L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.07e-01 0.0375 0.0998 0.596 NK_HLA L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 7.03e-01 0.034 0.0891 0.596 NK_HLA L2
ENSG00000134644 PUM1 -489952 sc-eQTL 7.40e-02 0.155 0.0862 0.596 NK_HLA L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.34e-01 -0.0174 0.0829 0.596 NK_HLA L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 5.44e-01 0.0536 0.0881 0.596 NK_HLA L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.34e-01 0.00712 0.0853 0.596 NK_HLA L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 3.88e-01 0.0787 0.0909 0.597 NK_cytokine L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 2.75e-01 0.0777 0.0709 0.597 NK_cytokine L2
ENSG00000134644 PUM1 -489952 sc-eQTL 6.87e-01 -0.031 0.0768 0.597 NK_cytokine L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 7.28e-01 -0.0295 0.0846 0.597 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 6.91e-01 0.0357 0.0897 0.597 NK_cytokine L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.24e-01 -0.0186 0.0834 0.597 NK_cytokine L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.08e-01 0.0759 0.114 0.615 PB L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 6.28e-02 -0.246 0.131 0.615 PB L2
ENSG00000134644 PUM1 -489952 sc-eQTL 9.68e-01 -0.00467 0.116 0.615 PB L2
ENSG00000162510 MATN1 -147546 sc-eQTL 5.94e-01 -0.0574 0.108 0.615 PB L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 6.73e-01 0.0325 0.0769 0.615 PB L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 9.34e-01 0.00872 0.105 0.615 PB L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 4.03e-01 -0.0938 0.112 0.615 PB L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 7.74e-01 -0.0206 0.0716 0.591 Pro_T L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.13e-01 0.0215 0.091 0.591 Pro_T L2
ENSG00000134644 PUM1 -489952 sc-eQTL 5.36e-01 -0.0526 0.0848 0.591 Pro_T L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 7.95e-02 -0.106 0.0604 0.591 Pro_T L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 7.43e-02 -0.151 0.0844 0.591 Pro_T L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 3.48e-01 -0.0734 0.0781 0.591 Pro_T L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 1.93e-02 -0.217 0.0921 0.594 Treg L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 6.24e-01 -0.0443 0.0902 0.594 Treg L2
ENSG00000134644 PUM1 -489952 sc-eQTL 5.89e-02 0.136 0.0716 0.594 Treg L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 1.20e-01 0.129 0.0823 0.594 Treg L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 9.50e-01 -0.00529 0.0843 0.594 Treg L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 4.69e-01 0.0609 0.0841 0.594 Treg L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 4.31e-01 -0.0759 0.0961 0.607 cDC L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.67e-01 -0.0597 0.104 0.607 cDC L2
ENSG00000134644 PUM1 -489952 sc-eQTL 3.59e-01 0.0821 0.0893 0.607 cDC L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 6.51e-01 0.0284 0.0627 0.607 cDC L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 1.17e-01 0.126 0.08 0.607 cDC L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 7.49e-01 -0.0254 0.0792 0.607 cDC L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.98e-01 0.0109 0.0852 0.607 cDC L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 2.77e-01 0.0828 0.076 0.594 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.43e-01 -0.0168 0.085 0.594 cMono_IL1B L2
ENSG00000134644 PUM1 -489952 sc-eQTL 2.62e-02 0.127 0.0569 0.594 cMono_IL1B L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.14e-01 0.0413 0.0504 0.594 cMono_IL1B L2
ENSG00000162512 SDC3 -332719 sc-eQTL 5.87e-02 -0.179 0.0944 0.594 cMono_IL1B L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 6.14e-02 0.18 0.0955 0.594 cMono_IL1B L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 5.38e-01 0.0525 0.0851 0.594 cMono_IL1B L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.22e-01 0.00776 0.0794 0.594 cMono_IL1B L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 9.48e-01 -0.00518 0.0795 0.594 cMono_S100A L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 5.47e-01 0.0566 0.0939 0.594 cMono_S100A L2
ENSG00000134644 PUM1 -489952 sc-eQTL 2.71e-01 0.0748 0.0677 0.594 cMono_S100A L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 5.28e-01 0.033 0.0521 0.594 cMono_S100A L2
ENSG00000162512 SDC3 -332719 sc-eQTL 6.24e-01 -0.0443 0.0901 0.594 cMono_S100A L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 1.64e-02 0.228 0.0942 0.594 cMono_S100A L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 4.93e-02 0.152 0.0768 0.594 cMono_S100A L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.83e-01 -0.0318 0.0778 0.594 cMono_S100A L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 6.61e-01 0.05 0.114 0.594 gdT L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 9.97e-02 0.161 0.0969 0.594 gdT L2
ENSG00000134644 PUM1 -489952 sc-eQTL 1.79e-01 0.135 0.1 0.594 gdT L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 9.53e-01 -0.0065 0.11 0.594 gdT L2
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 6.74e-01 -0.0426 0.101 0.594 gdT L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 1.93e-01 -0.127 0.0974 0.594 gdT L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.68e-01 0.051 0.0893 0.593 intMono L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 4.97e-01 -0.0653 0.096 0.593 intMono L2
ENSG00000134644 PUM1 -489952 sc-eQTL 5.70e-01 -0.0464 0.0815 0.593 intMono L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.34e-01 0.0134 0.064 0.593 intMono L2
ENSG00000162512 SDC3 -332719 sc-eQTL 3.41e-01 -0.0835 0.0874 0.593 intMono L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 8.58e-01 0.0164 0.0917 0.593 intMono L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 8.74e-01 0.0138 0.0869 0.593 intMono L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 1.54e-01 -0.124 0.0865 0.593 intMono L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 8.89e-01 -0.0117 0.0839 0.604 ncMono L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 8.39e-01 -0.0182 0.0895 0.604 ncMono L2
ENSG00000134644 PUM1 -489952 sc-eQTL 6.16e-01 0.0367 0.0731 0.604 ncMono L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.66e-01 0.0484 0.0663 0.604 ncMono L2
ENSG00000162512 SDC3 -332719 sc-eQTL 3.68e-01 -0.067 0.0743 0.604 ncMono L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 8.82e-01 -0.0121 0.0813 0.604 ncMono L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 5.87e-01 0.0441 0.0811 0.604 ncMono L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 9.38e-01 0.00659 0.0842 0.604 ncMono L2
ENSG00000060688 SNRNP40 -720749 sc-eQTL 4.03e-01 -0.0809 0.0965 0.605 pDC L2
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 6.08e-01 -0.0546 0.106 0.605 pDC L2
ENSG00000134644 PUM1 -489952 sc-eQTL 2.43e-01 0.103 0.0876 0.605 pDC L2
ENSG00000162511 LAPTM5 -181735 sc-eQTL 9.69e-01 0.00321 0.0818 0.605 pDC L2
ENSG00000168528 SERINC2 -833526 sc-eQTL 1.89e-01 0.13 0.0987 0.605 pDC L2
ENSG00000284543 LINC01226 -930187 sc-eQTL 6.10e-01 -0.0394 0.077 0.605 pDC L2
ENSG00000287510 AL137857.1 -155654 sc-eQTL 3.61e-01 -0.0828 0.0904 0.605 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.40e-01 0.0581 0.0947 0.594 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 3.94e-01 0.0672 0.0787 0.594 B_Memory LOneK1K
ENSG00000134644 PUM1 -489952 sc-eQTL 1.79e-01 0.0938 0.0696 0.594 B_Memory LOneK1K
ENSG00000162510 MATN1 -147546 sc-eQTL 6.75e-01 -0.0335 0.0797 0.594 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -181735 sc-eQTL 8.78e-01 -0.00771 0.0501 0.594 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 6.49e-01 -0.0302 0.0662 0.594 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -155654 sc-eQTL 6.72e-01 0.0306 0.0721 0.594 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -720749 sc-eQTL 9.17e-01 -0.00891 0.0859 0.594 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 1.89e-01 -0.0891 0.0677 0.594 B_Naive LOneK1K
ENSG00000134644 PUM1 -489952 sc-eQTL 3.54e-01 0.0596 0.0641 0.594 B_Naive LOneK1K
ENSG00000162510 MATN1 -147546 sc-eQTL 4.26e-01 -0.0493 0.0618 0.594 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -181735 sc-eQTL 3.28e-01 0.0426 0.0435 0.594 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 3.23e-01 -0.0557 0.0561 0.594 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -155654 sc-eQTL 7.86e-01 0.0182 0.0668 0.594 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -720749 sc-eQTL 8.82e-01 0.0108 0.0728 0.594 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 6.80e-01 0.034 0.0824 0.594 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -489952 sc-eQTL 3.46e-02 0.111 0.052 0.594 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -181735 sc-eQTL 2.10e-01 0.0579 0.046 0.594 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -332719 sc-eQTL 1.33e-01 -0.142 0.0938 0.594 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -833526 sc-eQTL 5.07e-02 0.189 0.0961 0.594 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -930187 sc-eQTL 1.85e-01 0.105 0.0792 0.594 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.49e-01 0.0142 0.0744 0.594 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -720749 sc-eQTL 5.21e-01 0.0507 0.0789 0.593 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 1.80e-01 -0.116 0.0861 0.593 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -489952 sc-eQTL 7.63e-01 0.0214 0.0708 0.593 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -181735 sc-eQTL 5.47e-01 0.0341 0.0566 0.593 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -332719 sc-eQTL 1.95e-01 -0.107 0.0824 0.593 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -833526 sc-eQTL 9.55e-01 0.00481 0.0858 0.593 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -930187 sc-eQTL 4.97e-01 0.0554 0.0814 0.593 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -155654 sc-eQTL 2.41e-01 -0.0955 0.0813 0.593 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -720749 sc-eQTL 1.05e-01 0.145 0.0892 0.597 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -720943 sc-eQTL 2.05e-01 0.0776 0.0611 0.597 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -489952 sc-eQTL 3.71e-01 0.0601 0.0671 0.597 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -181735 sc-eQTL 4.71e-01 -0.0541 0.075 0.597 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -142465 sc-eQTL 4.39e-01 0.067 0.0865 0.597 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -155654 sc-eQTL 8.82e-01 0.0111 0.0747 0.597 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -930242 3.21e-07 1.51e-07 6.57e-08 2.07e-07 1.05e-07 8.89e-08 2.4e-07 6.75e-08 1.94e-07 1.11e-07 1.86e-07 1.59e-07 2.29e-07 8.15e-08 6.27e-08 1.01e-07 5.27e-08 2.15e-07 7.53e-08 6.03e-08 1.27e-07 1.89e-07 1.69e-07 3.68e-08 2.17e-07 1.76e-07 1.31e-07 1.26e-07 1.37e-07 1.1e-07 1.26e-07 4.4e-08 3.74e-08 1.02e-07 3.51e-08 3.43e-08 4.54e-08 8.51e-08 6.21e-08 5.96e-08 6.28e-08 1.59e-07 4.17e-08 1.26e-08 2.64e-08 1.01e-08 7.61e-08 2.02e-09 4.83e-08