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Genes within 1Mb (chr1:30574515:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -722273 sc-eQTL 7.09e-01 -0.0286 0.0764 0.524 B L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 2.09e-01 0.0769 0.061 0.524 B L1
ENSG00000134644 PUM1 -491476 sc-eQTL 7.10e-01 -0.0191 0.0513 0.524 B L1
ENSG00000162510 MATN1 -149070 sc-eQTL 3.30e-01 0.0526 0.0539 0.524 B L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 1.20e-01 0.0656 0.042 0.524 B L1
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 6.67e-01 0.0214 0.0495 0.524 B L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 8.17e-01 0.0136 0.0586 0.524 B L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 9.80e-01 0.00164 0.0665 0.524 CD4T L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 8.47e-01 0.01 0.052 0.524 CD4T L1
ENSG00000134644 PUM1 -491476 sc-eQTL 8.62e-01 0.00806 0.0463 0.524 CD4T L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 6.86e-01 -0.0208 0.0513 0.524 CD4T L1
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 5.44e-01 0.0279 0.0458 0.524 CD4T L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 7.73e-01 -0.0159 0.0549 0.524 CD4T L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.61e-01 0.0642 0.087 0.524 CD8T L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.31e-01 0.0363 0.0579 0.524 CD8T L1
ENSG00000134644 PUM1 -491476 sc-eQTL 9.98e-01 -0.000133 0.0511 0.524 CD8T L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.04e-01 0.0629 0.0494 0.524 CD8T L1
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 6.05e-01 0.0301 0.0581 0.524 CD8T L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 3.89e-01 0.0629 0.0729 0.524 CD8T L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 6.17e-01 0.0396 0.0789 0.529 DC L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.09e-01 0.0349 0.0934 0.529 DC L1
ENSG00000134644 PUM1 -491476 sc-eQTL 9.77e-01 -0.00212 0.0732 0.529 DC L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 3.75e-01 -0.0464 0.0522 0.529 DC L1
ENSG00000168528 SERINC2 -835050 sc-eQTL 5.66e-02 -0.164 0.0854 0.529 DC L1
ENSG00000284543 LINC01226 -931711 sc-eQTL 9.59e-02 -0.0949 0.0567 0.529 DC L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 2.57e-01 -0.0937 0.0824 0.529 DC L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.03e-01 -0.0628 0.0608 0.524 Mono L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 3.55e-01 -0.0699 0.0754 0.524 Mono L1
ENSG00000134644 PUM1 -491476 sc-eQTL 2.44e-03 -0.145 0.0474 0.524 Mono L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 3.21e-01 -0.0443 0.0445 0.524 Mono L1
ENSG00000162512 SDC3 -334243 sc-eQTL 5.44e-02 0.164 0.0849 0.524 Mono L1
ENSG00000168528 SERINC2 -835050 sc-eQTL 1.33e-01 -0.138 0.0914 0.524 Mono L1
ENSG00000284543 LINC01226 -931711 sc-eQTL 3.59e-01 -0.0743 0.0808 0.524 Mono L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.95e-01 0.0916 0.0705 0.524 Mono L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.67e-01 -0.0628 0.0862 0.526 NK L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 8.30e-01 0.0127 0.0591 0.526 NK L1
ENSG00000134644 PUM1 -491476 sc-eQTL 9.28e-01 0.0056 0.062 0.526 NK L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.78e-02 0.156 0.0705 0.526 NK L1
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.26e-01 -0.0176 0.0801 0.526 NK L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 6.70e-01 0.0315 0.0739 0.526 NK L1
ENSG00000060688 SNRNP40 -722273 sc-eQTL 1.19e-01 0.0998 0.0637 0.524 Other_T L1
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 6.20e-02 0.127 0.0679 0.524 Other_T L1
ENSG00000134644 PUM1 -491476 sc-eQTL 5.18e-01 0.0399 0.0615 0.524 Other_T L1
ENSG00000162511 LAPTM5 -183259 sc-eQTL 8.57e-01 0.00912 0.0504 0.524 Other_T L1
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 7.81e-01 0.023 0.0826 0.524 Other_T L1
ENSG00000287510 AL137857.1 -157178 sc-eQTL 9.99e-01 0.000146 0.086 0.524 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.41e-01 -0.0806 0.104 0.526 B_Activated L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.28e-01 -0.0367 0.106 0.526 B_Activated L2
ENSG00000134644 PUM1 -491476 sc-eQTL 6.94e-01 0.0386 0.0981 0.526 B_Activated L2
ENSG00000162510 MATN1 -149070 sc-eQTL 5.49e-01 -0.0514 0.0856 0.526 B_Activated L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.41e-01 0.0701 0.0596 0.526 B_Activated L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 1.85e-01 -0.128 0.096 0.526 B_Activated L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.91e-01 0.046 0.0853 0.526 B_Activated L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.42e-01 0.0732 0.0949 0.521 B_Intermediate L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 6.06e-01 -0.0409 0.0792 0.521 B_Intermediate L2
ENSG00000134644 PUM1 -491476 sc-eQTL 4.59e-01 -0.0553 0.0746 0.521 B_Intermediate L2
ENSG00000162510 MATN1 -149070 sc-eQTL 4.56e-01 -0.058 0.0777 0.521 B_Intermediate L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 6.74e-01 0.0201 0.0477 0.521 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 5.00e-01 0.0453 0.0669 0.521 B_Intermediate L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 7.38e-02 -0.134 0.0744 0.521 B_Intermediate L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 9.04e-01 -0.011 0.0912 0.522 B_Memory L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 6.73e-01 0.0355 0.084 0.522 B_Memory L2
ENSG00000134644 PUM1 -491476 sc-eQTL 8.28e-01 0.0159 0.0731 0.522 B_Memory L2
ENSG00000162510 MATN1 -149070 sc-eQTL 9.85e-02 -0.115 0.0695 0.522 B_Memory L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 3.36e-01 0.0596 0.0619 0.522 B_Memory L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 5.94e-02 -0.133 0.0704 0.522 B_Memory L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 7.41e-01 0.0275 0.0831 0.522 B_Memory L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.23e-01 -0.0672 0.0837 0.524 B_Naive1 L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.31e-02 0.14 0.0717 0.524 B_Naive1 L2
ENSG00000134644 PUM1 -491476 sc-eQTL 5.43e-01 0.0388 0.0638 0.524 B_Naive1 L2
ENSG00000162510 MATN1 -149070 sc-eQTL 2.88e-01 0.0689 0.0646 0.524 B_Naive1 L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.83e-01 -0.0238 0.0432 0.524 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 5.47e-01 0.0343 0.0568 0.524 B_Naive1 L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.23e-01 0.0449 0.0701 0.524 B_Naive1 L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 5.21e-01 -0.0583 0.0907 0.524 B_Naive2 L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.28e-02 0.151 0.0742 0.524 B_Naive2 L2
ENSG00000134644 PUM1 -491476 sc-eQTL 2.24e-01 -0.089 0.0731 0.524 B_Naive2 L2
ENSG00000162510 MATN1 -149070 sc-eQTL 2.73e-01 0.0772 0.0702 0.524 B_Naive2 L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 8.51e-01 0.00898 0.0478 0.524 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.95e-01 0.00921 0.0696 0.524 B_Naive2 L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 4.43e-01 0.0577 0.0751 0.524 B_Naive2 L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 9.64e-01 0.00413 0.0907 0.527 CD4_CTL L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 6.34e-01 0.0425 0.0892 0.527 CD4_CTL L2
ENSG00000134644 PUM1 -491476 sc-eQTL 5.19e-01 -0.0565 0.0874 0.527 CD4_CTL L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.20e-01 0.0955 0.0777 0.527 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.67e-01 -0.0144 0.0853 0.527 CD4_CTL L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 4.88e-01 -0.0522 0.0752 0.527 CD4_CTL L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 8.96e-01 0.0091 0.0693 0.524 CD4_Naive L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 9.36e-01 0.00498 0.0614 0.524 CD4_Naive L2
ENSG00000134644 PUM1 -491476 sc-eQTL 5.07e-01 0.0325 0.049 0.524 CD4_Naive L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 9.38e-01 -0.00408 0.0526 0.524 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 1.44e-01 0.0779 0.0531 0.524 CD4_Naive L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 9.91e-01 0.000677 0.0613 0.524 CD4_Naive L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 8.62e-01 -0.0152 0.087 0.524 CD4_TCM L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 3.34e-01 0.0678 0.07 0.524 CD4_TCM L2
ENSG00000134644 PUM1 -491476 sc-eQTL 7.31e-01 0.0214 0.0621 0.524 CD4_TCM L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.75e-01 -0.0289 0.0515 0.524 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 2.38e-01 -0.0771 0.0652 0.524 CD4_TCM L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.74e-01 0.0409 0.0728 0.524 CD4_TCM L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.69e-01 0.0776 0.0863 0.524 CD4_TEM L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.06e-02 -0.168 0.0816 0.524 CD4_TEM L2
ENSG00000134644 PUM1 -491476 sc-eQTL 3.12e-01 -0.0694 0.0685 0.524 CD4_TEM L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.55e-01 0.079 0.0692 0.524 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 4.93e-01 0.0558 0.0811 0.524 CD4_TEM L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.37e-01 -0.119 0.0796 0.524 CD4_TEM L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.56e-01 0.0882 0.0954 0.524 CD8_CTL L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 9.11e-01 0.00819 0.0733 0.524 CD8_CTL L2
ENSG00000134644 PUM1 -491476 sc-eQTL 2.72e-01 -0.0782 0.0709 0.524 CD8_CTL L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.98e-01 0.082 0.0786 0.524 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 2.41e-01 0.0971 0.0826 0.524 CD8_CTL L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.23e-01 0.12 0.0775 0.524 CD8_CTL L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 9.88e-01 -0.00127 0.0864 0.524 CD8_Naive L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 2.34e-01 0.0887 0.0743 0.524 CD8_Naive L2
ENSG00000134644 PUM1 -491476 sc-eQTL 6.81e-01 -0.0247 0.06 0.524 CD8_Naive L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.58e-01 -0.0649 0.0573 0.524 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 4.47e-01 0.0546 0.0716 0.524 CD8_Naive L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.00e+00 -4.51e-05 0.0781 0.524 CD8_Naive L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 7.74e-02 0.168 0.0944 0.525 CD8_TCM L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 6.89e-01 -0.0349 0.0872 0.525 CD8_TCM L2
ENSG00000134644 PUM1 -491476 sc-eQTL 8.32e-02 0.142 0.0814 0.525 CD8_TCM L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 7.23e-02 0.154 0.0851 0.525 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 4.70e-01 0.0574 0.0793 0.525 CD8_TCM L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 8.70e-01 -0.0131 0.0803 0.525 CD8_TCM L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.90e-01 -0.0771 0.0895 0.516 CD8_TEM L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 1.05e-01 0.139 0.0854 0.516 CD8_TEM L2
ENSG00000134644 PUM1 -491476 sc-eQTL 3.89e-01 0.0757 0.0877 0.516 CD8_TEM L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.65e-01 0.0921 0.0824 0.516 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 7.60e-01 -0.0262 0.0858 0.516 CD8_TEM L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 6.87e-01 0.0313 0.0776 0.516 CD8_TEM L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 2.37e-01 0.107 0.0905 0.524 MAIT L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 3.62e-01 0.0733 0.0803 0.524 MAIT L2
ENSG00000134644 PUM1 -491476 sc-eQTL 2.27e-01 0.0932 0.0769 0.524 MAIT L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.73e-01 -0.0411 0.0727 0.524 MAIT L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 7.46e-01 -0.0262 0.081 0.524 MAIT L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 9.96e-01 0.000427 0.0835 0.524 MAIT L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.92e-01 -0.0656 0.0952 0.522 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.60e-01 -0.0595 0.0805 0.522 NK_CD56bright L2
ENSG00000134644 PUM1 -491476 sc-eQTL 5.01e-01 -0.057 0.0845 0.522 NK_CD56bright L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.04e-01 0.0558 0.0834 0.522 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.72e-01 -0.0135 0.0838 0.522 NK_CD56bright L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 7.65e-01 0.0248 0.0826 0.522 NK_CD56bright L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 7.40e-01 0.0301 0.0908 0.524 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 8.32e-01 0.0143 0.0671 0.524 NK_CD56dim L2
ENSG00000134644 PUM1 -491476 sc-eQTL 6.16e-01 0.0346 0.0688 0.524 NK_CD56dim L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.80e-02 0.161 0.0726 0.524 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.56e-01 -0.0167 0.092 0.524 NK_CD56dim L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 8.55e-01 -0.0139 0.0759 0.524 NK_CD56dim L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.71e-01 -0.0684 0.0946 0.53 NK_HLA L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.76e-01 0.0241 0.0846 0.53 NK_HLA L2
ENSG00000134644 PUM1 -491476 sc-eQTL 6.81e-01 -0.0339 0.0824 0.53 NK_HLA L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 9.86e-02 0.13 0.0782 0.53 NK_HLA L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 5.59e-01 -0.049 0.0836 0.53 NK_HLA L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.49e-01 0.117 0.0805 0.53 NK_HLA L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.35e-01 -0.0695 0.0889 0.524 NK_cytokine L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.60e-01 -0.0405 0.0694 0.524 NK_cytokine L2
ENSG00000134644 PUM1 -491476 sc-eQTL 7.80e-01 0.021 0.0751 0.524 NK_cytokine L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 3.77e-02 0.171 0.0819 0.524 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 4.37e-01 0.0681 0.0875 0.524 NK_cytokine L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 3.25e-01 0.0803 0.0814 0.524 NK_cytokine L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 5.03e-01 -0.0705 0.105 0.489 PB L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 1.93e-01 0.159 0.121 0.489 PB L2
ENSG00000134644 PUM1 -491476 sc-eQTL 9.13e-01 -0.0116 0.106 0.489 PB L2
ENSG00000162510 MATN1 -149070 sc-eQTL 8.72e-01 -0.0159 0.0988 0.489 PB L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 8.80e-01 -0.0107 0.0706 0.489 PB L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.71e-01 0.0158 0.0966 0.489 PB L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 6.33e-01 0.0492 0.103 0.489 PB L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 1.77e-01 0.0929 0.0686 0.526 Pro_T L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 3.60e-01 0.0801 0.0873 0.526 Pro_T L2
ENSG00000134644 PUM1 -491476 sc-eQTL 1.59e-01 0.115 0.0812 0.526 Pro_T L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 4.85e-01 0.0408 0.0584 0.526 Pro_T L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 4.09e-01 0.0676 0.0816 0.526 Pro_T L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.38e-01 0.0464 0.0751 0.526 Pro_T L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 8.23e-01 0.0202 0.0903 0.524 Treg L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.91e-01 -0.0231 0.0874 0.524 Treg L2
ENSG00000134644 PUM1 -491476 sc-eQTL 2.86e-01 -0.0746 0.0698 0.524 Treg L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 7.04e-01 -0.0304 0.0801 0.524 Treg L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 7.44e-01 0.0267 0.0816 0.524 Treg L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 9.12e-01 -0.00903 0.0815 0.524 Treg L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 5.73e-01 0.0515 0.0911 0.527 cDC L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.88e-01 -0.0536 0.0986 0.527 cDC L2
ENSG00000134644 PUM1 -491476 sc-eQTL 6.35e-01 0.0403 0.0848 0.527 cDC L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.79e-01 -0.033 0.0594 0.527 cDC L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 5.39e-03 -0.21 0.0747 0.527 cDC L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 3.00e-01 0.0777 0.0748 0.527 cDC L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 1.13e-01 -0.128 0.0802 0.527 cDC L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 5.89e-01 -0.0396 0.0732 0.524 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.36e-01 -0.0637 0.0816 0.524 cMono_IL1B L2
ENSG00000134644 PUM1 -491476 sc-eQTL 4.35e-03 -0.156 0.0542 0.524 cMono_IL1B L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 7.50e-01 -0.0155 0.0485 0.524 cMono_IL1B L2
ENSG00000162512 SDC3 -334243 sc-eQTL 1.08e-01 0.147 0.0909 0.524 cMono_IL1B L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 1.17e-01 -0.145 0.092 0.524 cMono_IL1B L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 7.72e-01 0.0237 0.0818 0.524 cMono_IL1B L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.65e-01 0.0439 0.0762 0.524 cMono_IL1B L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 7.81e-01 0.0215 0.0772 0.524 cMono_S100A L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.69e-01 -0.066 0.0911 0.524 cMono_S100A L2
ENSG00000134644 PUM1 -491476 sc-eQTL 1.36e-01 -0.098 0.0656 0.524 cMono_S100A L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 5.66e-01 -0.0291 0.0506 0.524 cMono_S100A L2
ENSG00000162512 SDC3 -334243 sc-eQTL 8.45e-01 0.0172 0.0875 0.524 cMono_S100A L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 4.80e-02 -0.183 0.0918 0.524 cMono_S100A L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 6.69e-02 -0.138 0.0747 0.524 cMono_S100A L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 3.81e-01 0.0662 0.0754 0.524 cMono_S100A L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.59e-01 -0.104 0.113 0.518 gdT L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.75e-01 -0.0698 0.0975 0.518 gdT L2
ENSG00000134644 PUM1 -491476 sc-eQTL 3.99e-01 -0.0849 0.1 0.518 gdT L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 9.88e-01 -0.00171 0.109 0.518 gdT L2
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 7.87e-01 -0.0273 0.101 0.518 gdT L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 3.06e-01 0.1 0.0974 0.518 gdT L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 5.88e-02 -0.16 0.0842 0.533 intMono L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.23e-01 0.0584 0.0912 0.533 intMono L2
ENSG00000134644 PUM1 -491476 sc-eQTL 2.85e-01 0.0829 0.0772 0.533 intMono L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.22e-01 -0.0741 0.0605 0.533 intMono L2
ENSG00000162512 SDC3 -334243 sc-eQTL 1.46e-01 0.121 0.0828 0.533 intMono L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 6.57e-01 -0.0387 0.087 0.533 intMono L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 9.93e-01 -0.000685 0.0825 0.533 intMono L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 6.15e-01 0.0415 0.0825 0.533 intMono L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 2.09e-01 -0.102 0.0806 0.525 ncMono L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.18e-01 0.0312 0.0862 0.525 ncMono L2
ENSG00000134644 PUM1 -491476 sc-eQTL 8.36e-01 0.0146 0.0705 0.525 ncMono L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 4.91e-01 -0.0441 0.0639 0.525 ncMono L2
ENSG00000162512 SDC3 -334243 sc-eQTL 6.49e-02 0.132 0.0712 0.525 ncMono L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 4.74e-01 -0.0561 0.0782 0.525 ncMono L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 5.78e-01 -0.0436 0.0782 0.525 ncMono L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 2.18e-01 0.0999 0.0808 0.525 ncMono L2
ENSG00000060688 SNRNP40 -722273 sc-eQTL 3.97e-01 0.0798 0.094 0.537 pDC L2
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 7.19e-01 -0.0373 0.103 0.537 pDC L2
ENSG00000134644 PUM1 -491476 sc-eQTL 9.31e-02 -0.144 0.085 0.537 pDC L2
ENSG00000162511 LAPTM5 -183259 sc-eQTL 6.07e-01 -0.041 0.0797 0.537 pDC L2
ENSG00000168528 SERINC2 -835050 sc-eQTL 2.46e-01 -0.112 0.0963 0.537 pDC L2
ENSG00000284543 LINC01226 -931711 sc-eQTL 3.81e-01 -0.0658 0.0749 0.537 pDC L2
ENSG00000287510 AL137857.1 -157178 sc-eQTL 4.68e-02 0.175 0.0872 0.537 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -722273 sc-eQTL 6.63e-01 -0.039 0.0894 0.524 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 5.58e-01 -0.0437 0.0744 0.524 B_Memory LOneK1K
ENSG00000134644 PUM1 -491476 sc-eQTL 3.28e-01 -0.0646 0.0658 0.524 B_Memory LOneK1K
ENSG00000162510 MATN1 -149070 sc-eQTL 2.19e-01 -0.0924 0.075 0.524 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.40e-01 0.0555 0.0471 0.524 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 6.30e-01 -0.0301 0.0625 0.524 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -157178 sc-eQTL 4.25e-01 -0.0544 0.068 0.524 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -722273 sc-eQTL 4.07e-01 -0.0686 0.0826 0.524 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 2.17e-02 0.149 0.0646 0.524 B_Naive LOneK1K
ENSG00000134644 PUM1 -491476 sc-eQTL 4.38e-01 -0.048 0.0618 0.524 B_Naive LOneK1K
ENSG00000162510 MATN1 -149070 sc-eQTL 7.44e-02 0.106 0.0592 0.524 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -183259 sc-eQTL 3.17e-01 -0.042 0.0419 0.524 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 2.29e-01 0.0652 0.054 0.524 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -157178 sc-eQTL 7.71e-01 0.0187 0.0644 0.524 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -722273 sc-eQTL 8.12e-01 -0.0166 0.0701 0.524 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 2.66e-01 -0.0883 0.0791 0.524 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -491476 sc-eQTL 1.48e-03 -0.159 0.0494 0.524 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -183259 sc-eQTL 4.18e-01 -0.036 0.0444 0.524 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -334243 sc-eQTL 2.95e-01 0.0951 0.0905 0.524 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -835050 sc-eQTL 9.15e-02 -0.157 0.0927 0.524 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -931711 sc-eQTL 7.91e-01 -0.0203 0.0765 0.524 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -157178 sc-eQTL 3.33e-01 0.0694 0.0715 0.524 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -722273 sc-eQTL 2.85e-02 -0.166 0.0752 0.528 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 4.08e-01 0.0689 0.0831 0.528 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -491476 sc-eQTL 8.25e-01 -0.0151 0.0682 0.528 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -183259 sc-eQTL 2.69e-01 -0.0603 0.0544 0.528 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -334243 sc-eQTL 4.91e-02 0.156 0.0789 0.528 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -835050 sc-eQTL 6.70e-01 -0.0353 0.0826 0.528 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -931711 sc-eQTL 5.10e-01 -0.0517 0.0783 0.528 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -157178 sc-eQTL 2.84e-01 0.0841 0.0783 0.528 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -722273 sc-eQTL 6.71e-01 -0.0367 0.0863 0.524 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -722467 sc-eQTL 8.53e-01 -0.011 0.059 0.524 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -491476 sc-eQTL 9.39e-01 0.00495 0.0646 0.524 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -183259 sc-eQTL 1.72e-02 0.171 0.0713 0.524 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -143989 sc-eQTL 8.92e-01 -0.0114 0.0833 0.524 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -157178 sc-eQTL 5.11e-01 0.0473 0.0718 0.524 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -931766 2.67e-07 1.3e-07 4.91e-08 1.86e-07 9.25e-08 9.76e-08 1.61e-07 5.48e-08 1.45e-07 5.42e-08 1.55e-07 9.19e-08 1.53e-07 6.76e-08 6.04e-08 7.49e-08 4.09e-08 1.33e-07 5.75e-08 4.16e-08 1.19e-07 1.24e-07 1.44e-07 2.95e-08 1.5e-07 1.25e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 9.92e-08 3.65e-08 3.56e-08 8.11e-08 7.36e-08 3.53e-08 5.04e-08 9.36e-08 6.37e-08 3.71e-08 5.13e-08 1.33e-07 5.24e-08 1.81e-08 5.15e-08 1.84e-08 1.22e-07 3.8e-09 4.9e-08