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Genes within 1Mb (chr1:30571250:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -725538 sc-eQTL 7.44e-01 0.0254 0.0778 0.44 B L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 1.43e-01 -0.0912 0.062 0.44 B L1
ENSG00000134644 PUM1 -494741 sc-eQTL 7.82e-01 0.0145 0.0523 0.44 B L1
ENSG00000162510 MATN1 -152335 sc-eQTL 6.52e-01 -0.0248 0.0549 0.44 B L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.72e-01 -0.0473 0.0429 0.44 B L1
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.77e-01 -0.0143 0.0504 0.44 B L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 9.46e-01 -0.00403 0.0597 0.44 B L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.36e-01 -0.0645 0.0669 0.44 CD4T L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.25e-01 -0.0256 0.0523 0.44 CD4T L1
ENSG00000134644 PUM1 -494741 sc-eQTL 6.29e-01 0.0226 0.0466 0.44 CD4T L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 5.17e-01 0.0335 0.0516 0.44 CD4T L1
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 5.31e-01 -0.029 0.0462 0.44 CD4T L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 5.95e-01 -0.0294 0.0553 0.44 CD4T L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.28e-01 -0.106 0.0877 0.44 CD8T L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 2.26e-01 -0.0708 0.0584 0.44 CD8T L1
ENSG00000134644 PUM1 -494741 sc-eQTL 2.99e-01 0.0535 0.0514 0.44 CD8T L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.51e-01 -0.0575 0.0499 0.44 CD8T L1
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 5.50e-01 -0.0351 0.0586 0.44 CD8T L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 2.87e-01 -0.0785 0.0735 0.44 CD8T L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.08e-01 -0.0994 0.0786 0.439 DC L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 1.37e-01 -0.139 0.093 0.439 DC L1
ENSG00000134644 PUM1 -494741 sc-eQTL 7.17e-01 0.0266 0.0732 0.439 DC L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.34e-01 0.0622 0.0521 0.439 DC L1
ENSG00000168528 SERINC2 -838315 sc-eQTL 2.11e-01 0.108 0.0859 0.439 DC L1
ENSG00000284543 LINC01226 -934976 sc-eQTL 3.15e-01 0.0574 0.057 0.439 DC L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 1.66e-01 0.114 0.0823 0.439 DC L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.77e-01 0.0258 0.0619 0.44 Mono L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.79e-01 0.0426 0.0767 0.44 Mono L1
ENSG00000134644 PUM1 -494741 sc-eQTL 1.85e-03 0.152 0.0481 0.44 Mono L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.36e-01 0.0674 0.045 0.44 Mono L1
ENSG00000162512 SDC3 -337508 sc-eQTL 2.56e-02 -0.193 0.0859 0.44 Mono L1
ENSG00000168528 SERINC2 -838315 sc-eQTL 2.26e-01 0.113 0.093 0.44 Mono L1
ENSG00000284543 LINC01226 -934976 sc-eQTL 2.04e-01 0.104 0.0819 0.44 Mono L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 4.32e-01 -0.0565 0.0717 0.44 Mono L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.79e-01 0.0937 0.0865 0.44 NK L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.32e-01 0.0285 0.0593 0.44 NK L1
ENSG00000134644 PUM1 -494741 sc-eQTL 4.70e-01 0.045 0.0622 0.44 NK L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.94e-01 -0.061 0.0715 0.44 NK L1
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.58e-01 -0.00429 0.0805 0.44 NK L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.82e-01 -0.065 0.0742 0.44 NK L1
ENSG00000060688 SNRNP40 -725538 sc-eQTL 5.98e-01 -0.0341 0.0645 0.44 Other_T L1
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 3.44e-01 -0.0653 0.0689 0.44 Other_T L1
ENSG00000134644 PUM1 -494741 sc-eQTL 9.70e-01 -0.00234 0.0621 0.44 Other_T L1
ENSG00000162511 LAPTM5 -186524 sc-eQTL 8.58e-01 -0.00914 0.0509 0.44 Other_T L1
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.86e-01 -0.0226 0.0833 0.44 Other_T L1
ENSG00000287510 AL137857.1 -160443 sc-eQTL 4.34e-01 -0.0679 0.0867 0.44 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -725538 sc-eQTL 4.20e-01 0.0856 0.106 0.439 B_Activated L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.38e-01 -0.0504 0.107 0.439 B_Activated L2
ENSG00000134644 PUM1 -494741 sc-eQTL 1.08e-01 -0.159 0.0987 0.439 B_Activated L2
ENSG00000162510 MATN1 -152335 sc-eQTL 8.59e-01 0.0154 0.0869 0.439 B_Activated L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 6.37e-01 -0.0286 0.0606 0.439 B_Activated L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 1.26e-01 0.149 0.0972 0.439 B_Activated L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.69e-01 -0.0143 0.0866 0.439 B_Activated L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 7.36e-01 -0.0327 0.0967 0.442 B_Intermediate L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.70e-01 0.0344 0.0806 0.442 B_Intermediate L2
ENSG00000134644 PUM1 -494741 sc-eQTL 3.12e-01 0.0769 0.0758 0.442 B_Intermediate L2
ENSG00000162510 MATN1 -152335 sc-eQTL 5.70e-01 0.0449 0.0791 0.442 B_Intermediate L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 9.08e-01 -0.0056 0.0486 0.442 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 3.52e-01 -0.0635 0.068 0.442 B_Intermediate L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.02e-02 0.133 0.0757 0.442 B_Intermediate L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.47e-01 0.0427 0.0933 0.442 B_Memory L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.62e-01 -0.0499 0.0859 0.442 B_Memory L2
ENSG00000134644 PUM1 -494741 sc-eQTL 9.89e-01 -0.00101 0.0749 0.442 B_Memory L2
ENSG00000162510 MATN1 -152335 sc-eQTL 5.74e-01 0.0402 0.0716 0.442 B_Memory L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.07e-01 -0.0649 0.0633 0.442 B_Memory L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 1.44e-01 0.106 0.0723 0.442 B_Memory L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.61e-01 0.0373 0.085 0.442 B_Memory L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 4.32e-01 0.0669 0.0849 0.44 B_Naive1 L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.51e-02 -0.135 0.0728 0.44 B_Naive1 L2
ENSG00000134644 PUM1 -494741 sc-eQTL 8.84e-01 -0.00944 0.0648 0.44 B_Naive1 L2
ENSG00000162510 MATN1 -152335 sc-eQTL 4.74e-01 -0.047 0.0657 0.44 B_Naive1 L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 4.98e-01 0.0297 0.0439 0.44 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 5.04e-01 -0.0386 0.0576 0.44 B_Naive1 L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 7.59e-01 -0.0219 0.0712 0.44 B_Naive1 L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 7.48e-01 -0.0296 0.0921 0.44 B_Naive2 L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.94e-02 -0.143 0.0754 0.44 B_Naive2 L2
ENSG00000134644 PUM1 -494741 sc-eQTL 5.93e-01 0.0398 0.0744 0.44 B_Naive2 L2
ENSG00000162510 MATN1 -152335 sc-eQTL 7.35e-01 -0.0242 0.0714 0.44 B_Naive2 L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 7.37e-01 0.0163 0.0485 0.44 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 4.33e-01 0.0554 0.0706 0.44 B_Naive2 L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 7.94e-01 -0.02 0.0763 0.44 B_Naive2 L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.64e-01 0.0394 0.0907 0.436 CD4_CTL L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.31e-01 -0.0559 0.0891 0.436 CD4_CTL L2
ENSG00000134644 PUM1 -494741 sc-eQTL 5.00e-01 0.059 0.0874 0.436 CD4_CTL L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.36e-01 -0.075 0.0778 0.436 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 4.40e-01 0.0659 0.0852 0.436 CD4_CTL L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 2.72e-01 0.0827 0.0751 0.436 CD4_CTL L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.62e-01 -0.0784 0.0697 0.44 CD4_Naive L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.57e-01 -0.0112 0.062 0.44 CD4_Naive L2
ENSG00000134644 PUM1 -494741 sc-eQTL 8.85e-01 -0.00716 0.0495 0.44 CD4_Naive L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 6.53e-01 0.0238 0.053 0.44 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.89e-02 -0.0886 0.0535 0.44 CD4_Naive L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.93e-01 -0.0244 0.0618 0.44 CD4_Naive L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.21e-01 -0.0435 0.0879 0.44 CD4_TCM L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 3.43e-01 -0.0672 0.0708 0.44 CD4_TCM L2
ENSG00000134644 PUM1 -494741 sc-eQTL 8.46e-01 0.0122 0.0628 0.44 CD4_TCM L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.51e-01 0.0486 0.052 0.44 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 3.15e-01 0.0664 0.0659 0.44 CD4_TCM L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.33e-01 -0.0712 0.0734 0.44 CD4_TCM L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.51e-01 -0.0818 0.0874 0.44 CD4_TEM L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.85e-02 0.152 0.0829 0.44 CD4_TEM L2
ENSG00000134644 PUM1 -494741 sc-eQTL 6.60e-02 0.128 0.069 0.44 CD4_TEM L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 5.88e-01 -0.0382 0.0703 0.44 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 3.41e-01 -0.0783 0.0821 0.44 CD4_TEM L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 2.10e-01 0.102 0.0808 0.44 CD4_TEM L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.20e-02 -0.206 0.0953 0.44 CD8_CTL L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.99e-01 -0.0286 0.0739 0.44 CD8_CTL L2
ENSG00000134644 PUM1 -494741 sc-eQTL 1.33e-01 0.108 0.0714 0.44 CD8_CTL L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.10e-01 -0.0806 0.0793 0.44 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 2.33e-01 -0.0997 0.0833 0.44 CD8_CTL L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 4.72e-01 -0.0565 0.0785 0.44 CD8_CTL L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.09e-01 0.0447 0.0873 0.44 CD8_Naive L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 3.73e-01 -0.0672 0.0752 0.44 CD8_Naive L2
ENSG00000134644 PUM1 -494741 sc-eQTL 2.36e-01 0.0719 0.0604 0.44 CD8_Naive L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.74e-01 0.079 0.0579 0.44 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 3.89e-01 -0.0625 0.0724 0.44 CD8_Naive L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.84e-01 -0.0115 0.079 0.44 CD8_Naive L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 1.02e-02 -0.248 0.0955 0.44 CD8_TCM L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 9.42e-01 0.00651 0.089 0.44 CD8_TCM L2
ENSG00000134644 PUM1 -494741 sc-eQTL 2.96e-01 -0.0875 0.0835 0.44 CD8_TCM L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.52e-01 -0.125 0.0872 0.44 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.14e-01 -0.0297 0.0811 0.44 CD8_TCM L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.04e-01 -0.0203 0.082 0.44 CD8_TCM L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.03e-01 0.116 0.091 0.445 CD8_TEM L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 3.45e-02 -0.184 0.0867 0.445 CD8_TEM L2
ENSG00000134644 PUM1 -494741 sc-eQTL 4.77e-01 -0.0637 0.0895 0.445 CD8_TEM L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.31e-01 -0.101 0.0839 0.445 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 8.97e-01 0.0113 0.0874 0.445 CD8_TEM L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.12e-01 -0.0402 0.0791 0.445 CD8_TEM L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.31e-01 -0.111 0.0921 0.439 MAIT L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.72e-01 -0.0464 0.0819 0.439 MAIT L2
ENSG00000134644 PUM1 -494741 sc-eQTL 6.26e-01 -0.0383 0.0785 0.439 MAIT L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 4.37e-01 0.0576 0.074 0.439 MAIT L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.66e-01 0.0246 0.0825 0.439 MAIT L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 9.26e-01 -0.00793 0.085 0.439 MAIT L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 4.27e-01 0.0765 0.0961 0.444 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 4.55e-01 0.0607 0.0812 0.444 NK_CD56bright L2
ENSG00000134644 PUM1 -494741 sc-eQTL 4.77e-01 0.0608 0.0853 0.444 NK_CD56bright L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 9.37e-01 -0.00671 0.0842 0.444 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.93e-01 -0.0222 0.0846 0.444 NK_CD56bright L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 9.79e-01 0.00218 0.0834 0.444 NK_CD56bright L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.70e-01 -0.0391 0.0916 0.442 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 7.89e-01 0.0182 0.0678 0.442 NK_CD56dim L2
ENSG00000134644 PUM1 -494741 sc-eQTL 5.56e-01 0.041 0.0695 0.442 NK_CD56dim L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 4.66e-01 -0.0542 0.0741 0.442 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.57e-01 0.00498 0.0929 0.442 NK_CD56dim L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.27e-01 -0.0168 0.0767 0.442 NK_CD56dim L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 7.01e-01 0.0372 0.0968 0.436 NK_HLA L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 4.54e-01 -0.0648 0.0863 0.436 NK_HLA L2
ENSG00000134644 PUM1 -494741 sc-eQTL 6.55e-01 0.0377 0.0842 0.436 NK_HLA L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.04e-01 -0.0827 0.0802 0.436 NK_HLA L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.98e-01 0.000161 0.0855 0.436 NK_HLA L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 2.79e-01 -0.0895 0.0825 0.436 NK_HLA L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.26e-01 0.0878 0.0892 0.442 NK_cytokine L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 1.89e-01 0.0916 0.0695 0.442 NK_cytokine L2
ENSG00000134644 PUM1 -494741 sc-eQTL 6.31e-01 -0.0363 0.0754 0.442 NK_cytokine L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.31e-01 -0.0809 0.0829 0.442 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 5.32e-01 -0.055 0.088 0.442 NK_cytokine L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 4.48e-01 -0.0622 0.0818 0.442 NK_cytokine L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 9.15e-01 0.0116 0.108 0.47 PB L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.96e-02 -0.211 0.123 0.47 PB L2
ENSG00000134644 PUM1 -494741 sc-eQTL 7.18e-01 -0.0392 0.108 0.47 PB L2
ENSG00000162510 MATN1 -152335 sc-eQTL 5.20e-01 0.065 0.101 0.47 PB L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.39e-01 0.0849 0.0717 0.47 PB L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.11e-01 -0.011 0.0988 0.47 PB L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.47e-01 -0.0482 0.105 0.47 PB L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 1.11e-01 -0.111 0.069 0.437 Pro_T L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 4.99e-01 -0.0597 0.0881 0.437 Pro_T L2
ENSG00000134644 PUM1 -494741 sc-eQTL 4.73e-01 -0.059 0.0821 0.437 Pro_T L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.53e-01 -0.0548 0.0589 0.437 Pro_T L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 6.89e-02 -0.15 0.0818 0.437 Pro_T L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.78e-01 -0.0669 0.0757 0.437 Pro_T L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 1.98e-01 -0.117 0.0905 0.44 Treg L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 9.72e-01 0.00309 0.0879 0.44 Treg L2
ENSG00000134644 PUM1 -494741 sc-eQTL 1.67e-01 0.0972 0.07 0.44 Treg L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 6.20e-01 0.0399 0.0805 0.44 Treg L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.35e-01 -0.0278 0.082 0.44 Treg L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.04e-01 0.0425 0.0819 0.44 Treg L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 2.06e-01 -0.114 0.0901 0.444 cDC L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 9.02e-01 -0.0121 0.098 0.444 cDC L2
ENSG00000134644 PUM1 -494741 sc-eQTL 8.33e-01 0.0178 0.0842 0.444 cDC L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 4.83e-01 0.0414 0.0589 0.444 cDC L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 1.37e-02 0.186 0.0745 0.444 cDC L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 1.79e-01 -0.1 0.0741 0.444 cDC L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 8.75e-02 0.137 0.0795 0.444 cDC L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 6.50e-01 0.0336 0.0739 0.44 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.98e-01 0.0106 0.0825 0.44 cMono_IL1B L2
ENSG00000134644 PUM1 -494741 sc-eQTL 3.02e-03 0.164 0.0547 0.44 cMono_IL1B L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.64e-01 0.0444 0.0489 0.44 cMono_IL1B L2
ENSG00000162512 SDC3 -337508 sc-eQTL 6.36e-02 -0.171 0.0915 0.44 cMono_IL1B L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 2.38e-01 0.11 0.0931 0.44 cMono_IL1B L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 8.35e-01 0.0172 0.0826 0.44 cMono_IL1B L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 6.86e-01 -0.0311 0.077 0.44 cMono_IL1B L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 9.28e-01 0.00704 0.0783 0.44 cMono_S100A L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.57e-01 0.0411 0.0925 0.44 cMono_S100A L2
ENSG00000134644 PUM1 -494741 sc-eQTL 2.11e-01 0.0836 0.0666 0.44 cMono_S100A L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 3.93e-01 0.0439 0.0513 0.44 cMono_S100A L2
ENSG00000162512 SDC3 -337508 sc-eQTL 2.14e-01 -0.11 0.0885 0.44 cMono_S100A L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 6.98e-02 0.17 0.0933 0.44 cMono_S100A L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 7.30e-02 0.137 0.0758 0.44 cMono_S100A L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.54e-01 -0.0711 0.0765 0.44 cMono_S100A L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 1.70e-01 0.155 0.113 0.452 gdT L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 5.80e-01 0.054 0.0973 0.452 gdT L2
ENSG00000134644 PUM1 -494741 sc-eQTL 4.33e-01 0.0787 0.1 0.452 gdT L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 6.34e-01 -0.0521 0.109 0.452 gdT L2
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 7.36e-01 0.034 0.101 0.452 gdT L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 9.79e-02 -0.161 0.0966 0.452 gdT L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.22e-01 0.0853 0.0858 0.436 intMono L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.64e-01 -0.0159 0.0925 0.436 intMono L2
ENSG00000134644 PUM1 -494741 sc-eQTL 5.25e-01 -0.05 0.0784 0.436 intMono L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.54e-01 0.0876 0.0612 0.436 intMono L2
ENSG00000162512 SDC3 -337508 sc-eQTL 8.04e-02 -0.147 0.0836 0.436 intMono L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 4.03e-01 0.0738 0.0881 0.436 intMono L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 9.05e-01 -0.00999 0.0836 0.436 intMono L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 4.88e-01 -0.058 0.0835 0.436 intMono L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 4.51e-01 0.0615 0.0815 0.446 ncMono L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 9.49e-01 0.00555 0.087 0.446 ncMono L2
ENSG00000134644 PUM1 -494741 sc-eQTL 3.69e-01 0.0639 0.0709 0.446 ncMono L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.66e-01 0.0718 0.0643 0.446 ncMono L2
ENSG00000162512 SDC3 -337508 sc-eQTL 7.02e-03 -0.194 0.071 0.446 ncMono L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 6.47e-01 0.0362 0.0789 0.446 ncMono L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 2.23e-01 0.096 0.0786 0.446 ncMono L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.40e-01 -0.0781 0.0816 0.446 ncMono L2
ENSG00000060688 SNRNP40 -725538 sc-eQTL 3.22e-01 -0.0921 0.0926 0.444 pDC L2
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 7.48e-01 -0.0328 0.102 0.444 pDC L2
ENSG00000134644 PUM1 -494741 sc-eQTL 4.91e-02 0.166 0.0835 0.444 pDC L2
ENSG00000162511 LAPTM5 -186524 sc-eQTL 5.31e-01 0.0493 0.0785 0.444 pDC L2
ENSG00000168528 SERINC2 -838315 sc-eQTL 3.28e-01 0.0932 0.0951 0.444 pDC L2
ENSG00000284543 LINC01226 -934976 sc-eQTL 7.42e-01 0.0244 0.074 0.444 pDC L2
ENSG00000287510 AL137857.1 -160443 sc-eQTL 1.49e-01 -0.126 0.0865 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -725538 sc-eQTL 4.91e-01 0.0629 0.0913 0.44 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.51e-01 0.0143 0.0761 0.44 B_Memory LOneK1K
ENSG00000134644 PUM1 -494741 sc-eQTL 3.76e-01 0.0598 0.0673 0.44 B_Memory LOneK1K
ENSG00000162510 MATN1 -152335 sc-eQTL 5.28e-01 0.0485 0.0768 0.44 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -186524 sc-eQTL 5.23e-01 -0.0309 0.0483 0.44 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 6.53e-01 0.0288 0.0639 0.44 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.38e-01 0.0667 0.0695 0.44 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -725538 sc-eQTL 5.13e-01 0.0548 0.0838 0.44 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 2.57e-02 -0.147 0.0655 0.44 B_Naive LOneK1K
ENSG00000134644 PUM1 -494741 sc-eQTL 3.82e-01 0.0549 0.0626 0.44 B_Naive LOneK1K
ENSG00000162510 MATN1 -152335 sc-eQTL 3.15e-01 -0.0606 0.0602 0.44 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.11e-01 0.0531 0.0423 0.44 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 3.86e-01 -0.0476 0.0548 0.44 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -160443 sc-eQTL 9.28e-01 0.00591 0.0652 0.44 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -725538 sc-eQTL 9.86e-01 -0.00127 0.0708 0.44 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 6.78e-01 0.0333 0.0802 0.44 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -494741 sc-eQTL 2.67e-03 0.152 0.0501 0.44 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.82e-01 0.06 0.0448 0.44 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -337508 sc-eQTL 9.65e-02 -0.152 0.0912 0.44 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -838315 sc-eQTL 1.82e-01 0.126 0.094 0.44 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -934976 sc-eQTL 4.39e-01 0.0599 0.0773 0.44 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -160443 sc-eQTL 5.22e-01 -0.0465 0.0724 0.44 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -725538 sc-eQTL 1.10e-01 0.123 0.0767 0.438 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 8.28e-01 -0.0184 0.0845 0.438 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -494741 sc-eQTL 4.77e-01 0.0493 0.0691 0.438 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -186524 sc-eQTL 1.75e-01 0.0751 0.0551 0.438 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -337508 sc-eQTL 2.33e-02 -0.183 0.0799 0.438 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -838315 sc-eQTL 5.44e-01 0.0509 0.0838 0.438 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -934976 sc-eQTL 4.23e-01 0.0639 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -160443 sc-eQTL 2.66e-01 -0.0887 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -725538 sc-eQTL 5.06e-01 0.058 0.087 0.442 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -725732 sc-eQTL 3.55e-01 0.055 0.0594 0.442 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -494741 sc-eQTL 4.94e-01 0.0446 0.0651 0.442 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -186524 sc-eQTL 2.76e-01 -0.0794 0.0726 0.442 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -147254 sc-eQTL 9.82e-01 0.00185 0.084 0.442 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -160443 sc-eQTL 3.82e-01 -0.0634 0.0724 0.442 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -935031 2.67e-07 1.25e-07 4.08e-08 1.81e-07 9.79e-08 1e-07 1.44e-07 5.4e-08 1.44e-07 4.74e-08 1.6e-07 8.36e-08 1.41e-07 6.76e-08 6.17e-08 7.37e-08 3.98e-08 1.21e-07 5.75e-08 4.31e-08 1.19e-07 1.27e-07 1.39e-07 2.95e-08 1.4e-07 1.14e-07 1.06e-07 9.65e-08 1.08e-07 1.07e-07 9.64e-08 2.9e-08 3.61e-08 8.23e-08 7.02e-08 3.04e-08 5.65e-08 8.63e-08 6.63e-08 3.87e-08 4.69e-08 1.35e-07 5.24e-08 7.47e-09 4.25e-08 1.86e-08 1.19e-07 1.88e-09 4.88e-08