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Genes within 1Mb (chr1:30568959:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -727829 sc-eQTL 7.44e-01 0.0254 0.0778 0.44 B L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 1.43e-01 -0.0912 0.062 0.44 B L1
ENSG00000134644 PUM1 -497032 sc-eQTL 7.82e-01 0.0145 0.0523 0.44 B L1
ENSG00000162510 MATN1 -154626 sc-eQTL 6.52e-01 -0.0248 0.0549 0.44 B L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.72e-01 -0.0473 0.0429 0.44 B L1
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.77e-01 -0.0143 0.0504 0.44 B L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 9.46e-01 -0.00403 0.0597 0.44 B L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.36e-01 -0.0645 0.0669 0.44 CD4T L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.25e-01 -0.0256 0.0523 0.44 CD4T L1
ENSG00000134644 PUM1 -497032 sc-eQTL 6.29e-01 0.0226 0.0466 0.44 CD4T L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 5.17e-01 0.0335 0.0516 0.44 CD4T L1
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 5.31e-01 -0.029 0.0462 0.44 CD4T L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 5.95e-01 -0.0294 0.0553 0.44 CD4T L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.28e-01 -0.106 0.0877 0.44 CD8T L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 2.26e-01 -0.0708 0.0584 0.44 CD8T L1
ENSG00000134644 PUM1 -497032 sc-eQTL 2.99e-01 0.0535 0.0514 0.44 CD8T L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.51e-01 -0.0575 0.0499 0.44 CD8T L1
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 5.50e-01 -0.0351 0.0586 0.44 CD8T L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 2.87e-01 -0.0785 0.0735 0.44 CD8T L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.08e-01 -0.0994 0.0786 0.439 DC L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 1.37e-01 -0.139 0.093 0.439 DC L1
ENSG00000134644 PUM1 -497032 sc-eQTL 7.17e-01 0.0266 0.0732 0.439 DC L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.34e-01 0.0622 0.0521 0.439 DC L1
ENSG00000168528 SERINC2 -840606 sc-eQTL 2.11e-01 0.108 0.0859 0.439 DC L1
ENSG00000284543 LINC01226 -937267 sc-eQTL 3.15e-01 0.0574 0.057 0.439 DC L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 1.66e-01 0.114 0.0823 0.439 DC L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.77e-01 0.0258 0.0619 0.44 Mono L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.79e-01 0.0426 0.0767 0.44 Mono L1
ENSG00000134644 PUM1 -497032 sc-eQTL 1.85e-03 0.152 0.0481 0.44 Mono L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.36e-01 0.0674 0.045 0.44 Mono L1
ENSG00000162512 SDC3 -339799 sc-eQTL 2.56e-02 -0.193 0.0859 0.44 Mono L1
ENSG00000168528 SERINC2 -840606 sc-eQTL 2.26e-01 0.113 0.093 0.44 Mono L1
ENSG00000284543 LINC01226 -937267 sc-eQTL 2.04e-01 0.104 0.0819 0.44 Mono L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 4.32e-01 -0.0565 0.0717 0.44 Mono L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.79e-01 0.0937 0.0865 0.44 NK L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.32e-01 0.0285 0.0593 0.44 NK L1
ENSG00000134644 PUM1 -497032 sc-eQTL 4.70e-01 0.045 0.0622 0.44 NK L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.94e-01 -0.061 0.0715 0.44 NK L1
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.58e-01 -0.00429 0.0805 0.44 NK L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.82e-01 -0.065 0.0742 0.44 NK L1
ENSG00000060688 SNRNP40 -727829 sc-eQTL 5.98e-01 -0.0341 0.0645 0.44 Other_T L1
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 3.44e-01 -0.0653 0.0689 0.44 Other_T L1
ENSG00000134644 PUM1 -497032 sc-eQTL 9.70e-01 -0.00234 0.0621 0.44 Other_T L1
ENSG00000162511 LAPTM5 -188815 sc-eQTL 8.58e-01 -0.00914 0.0509 0.44 Other_T L1
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.86e-01 -0.0226 0.0833 0.44 Other_T L1
ENSG00000287510 AL137857.1 -162734 sc-eQTL 4.34e-01 -0.0679 0.0867 0.44 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -727829 sc-eQTL 4.20e-01 0.0856 0.106 0.439 B_Activated L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.38e-01 -0.0504 0.107 0.439 B_Activated L2
ENSG00000134644 PUM1 -497032 sc-eQTL 1.08e-01 -0.159 0.0987 0.439 B_Activated L2
ENSG00000162510 MATN1 -154626 sc-eQTL 8.59e-01 0.0154 0.0869 0.439 B_Activated L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 6.37e-01 -0.0286 0.0606 0.439 B_Activated L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 1.26e-01 0.149 0.0972 0.439 B_Activated L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.69e-01 -0.0143 0.0866 0.439 B_Activated L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 7.36e-01 -0.0327 0.0967 0.442 B_Intermediate L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.70e-01 0.0344 0.0806 0.442 B_Intermediate L2
ENSG00000134644 PUM1 -497032 sc-eQTL 3.12e-01 0.0769 0.0758 0.442 B_Intermediate L2
ENSG00000162510 MATN1 -154626 sc-eQTL 5.70e-01 0.0449 0.0791 0.442 B_Intermediate L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 9.08e-01 -0.0056 0.0486 0.442 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 3.52e-01 -0.0635 0.068 0.442 B_Intermediate L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.02e-02 0.133 0.0757 0.442 B_Intermediate L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.47e-01 0.0427 0.0933 0.442 B_Memory L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.62e-01 -0.0499 0.0859 0.442 B_Memory L2
ENSG00000134644 PUM1 -497032 sc-eQTL 9.89e-01 -0.00101 0.0749 0.442 B_Memory L2
ENSG00000162510 MATN1 -154626 sc-eQTL 5.74e-01 0.0402 0.0716 0.442 B_Memory L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.07e-01 -0.0649 0.0633 0.442 B_Memory L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 1.44e-01 0.106 0.0723 0.442 B_Memory L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.61e-01 0.0373 0.085 0.442 B_Memory L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 4.32e-01 0.0669 0.0849 0.44 B_Naive1 L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.51e-02 -0.135 0.0728 0.44 B_Naive1 L2
ENSG00000134644 PUM1 -497032 sc-eQTL 8.84e-01 -0.00944 0.0648 0.44 B_Naive1 L2
ENSG00000162510 MATN1 -154626 sc-eQTL 4.74e-01 -0.047 0.0657 0.44 B_Naive1 L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 4.98e-01 0.0297 0.0439 0.44 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 5.04e-01 -0.0386 0.0576 0.44 B_Naive1 L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 7.59e-01 -0.0219 0.0712 0.44 B_Naive1 L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 7.48e-01 -0.0296 0.0921 0.44 B_Naive2 L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.94e-02 -0.143 0.0754 0.44 B_Naive2 L2
ENSG00000134644 PUM1 -497032 sc-eQTL 5.93e-01 0.0398 0.0744 0.44 B_Naive2 L2
ENSG00000162510 MATN1 -154626 sc-eQTL 7.35e-01 -0.0242 0.0714 0.44 B_Naive2 L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 7.37e-01 0.0163 0.0485 0.44 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 4.33e-01 0.0554 0.0706 0.44 B_Naive2 L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 7.94e-01 -0.02 0.0763 0.44 B_Naive2 L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.64e-01 0.0394 0.0907 0.436 CD4_CTL L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.31e-01 -0.0559 0.0891 0.436 CD4_CTL L2
ENSG00000134644 PUM1 -497032 sc-eQTL 5.00e-01 0.059 0.0874 0.436 CD4_CTL L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.36e-01 -0.075 0.0778 0.436 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 4.40e-01 0.0659 0.0852 0.436 CD4_CTL L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 2.72e-01 0.0827 0.0751 0.436 CD4_CTL L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.62e-01 -0.0784 0.0697 0.44 CD4_Naive L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.57e-01 -0.0112 0.062 0.44 CD4_Naive L2
ENSG00000134644 PUM1 -497032 sc-eQTL 8.85e-01 -0.00716 0.0495 0.44 CD4_Naive L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 6.53e-01 0.0238 0.053 0.44 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.89e-02 -0.0886 0.0535 0.44 CD4_Naive L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.93e-01 -0.0244 0.0618 0.44 CD4_Naive L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.21e-01 -0.0435 0.0879 0.44 CD4_TCM L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 3.43e-01 -0.0672 0.0708 0.44 CD4_TCM L2
ENSG00000134644 PUM1 -497032 sc-eQTL 8.46e-01 0.0122 0.0628 0.44 CD4_TCM L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.51e-01 0.0486 0.052 0.44 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 3.15e-01 0.0664 0.0659 0.44 CD4_TCM L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.33e-01 -0.0712 0.0734 0.44 CD4_TCM L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.51e-01 -0.0818 0.0874 0.44 CD4_TEM L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.85e-02 0.152 0.0829 0.44 CD4_TEM L2
ENSG00000134644 PUM1 -497032 sc-eQTL 6.60e-02 0.128 0.069 0.44 CD4_TEM L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 5.88e-01 -0.0382 0.0703 0.44 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 3.41e-01 -0.0783 0.0821 0.44 CD4_TEM L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 2.10e-01 0.102 0.0808 0.44 CD4_TEM L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.20e-02 -0.206 0.0953 0.44 CD8_CTL L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.99e-01 -0.0286 0.0739 0.44 CD8_CTL L2
ENSG00000134644 PUM1 -497032 sc-eQTL 1.33e-01 0.108 0.0714 0.44 CD8_CTL L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.10e-01 -0.0806 0.0793 0.44 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 2.33e-01 -0.0997 0.0833 0.44 CD8_CTL L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 4.72e-01 -0.0565 0.0785 0.44 CD8_CTL L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.09e-01 0.0447 0.0873 0.44 CD8_Naive L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 3.73e-01 -0.0672 0.0752 0.44 CD8_Naive L2
ENSG00000134644 PUM1 -497032 sc-eQTL 2.36e-01 0.0719 0.0604 0.44 CD8_Naive L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.74e-01 0.079 0.0579 0.44 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 3.89e-01 -0.0625 0.0724 0.44 CD8_Naive L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.84e-01 -0.0115 0.079 0.44 CD8_Naive L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 1.02e-02 -0.248 0.0955 0.44 CD8_TCM L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 9.42e-01 0.00651 0.089 0.44 CD8_TCM L2
ENSG00000134644 PUM1 -497032 sc-eQTL 2.96e-01 -0.0875 0.0835 0.44 CD8_TCM L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.52e-01 -0.125 0.0872 0.44 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.14e-01 -0.0297 0.0811 0.44 CD8_TCM L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.04e-01 -0.0203 0.082 0.44 CD8_TCM L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.03e-01 0.116 0.091 0.445 CD8_TEM L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 3.45e-02 -0.184 0.0867 0.445 CD8_TEM L2
ENSG00000134644 PUM1 -497032 sc-eQTL 4.77e-01 -0.0637 0.0895 0.445 CD8_TEM L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.31e-01 -0.101 0.0839 0.445 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 8.97e-01 0.0113 0.0874 0.445 CD8_TEM L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.12e-01 -0.0402 0.0791 0.445 CD8_TEM L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.31e-01 -0.111 0.0921 0.439 MAIT L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.72e-01 -0.0464 0.0819 0.439 MAIT L2
ENSG00000134644 PUM1 -497032 sc-eQTL 6.26e-01 -0.0383 0.0785 0.439 MAIT L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 4.37e-01 0.0576 0.074 0.439 MAIT L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.66e-01 0.0246 0.0825 0.439 MAIT L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 9.26e-01 -0.00793 0.085 0.439 MAIT L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 4.27e-01 0.0765 0.0961 0.444 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 4.55e-01 0.0607 0.0812 0.444 NK_CD56bright L2
ENSG00000134644 PUM1 -497032 sc-eQTL 4.77e-01 0.0608 0.0853 0.444 NK_CD56bright L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 9.37e-01 -0.00671 0.0842 0.444 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.93e-01 -0.0222 0.0846 0.444 NK_CD56bright L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 9.79e-01 0.00218 0.0834 0.444 NK_CD56bright L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.70e-01 -0.0391 0.0916 0.442 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 7.89e-01 0.0182 0.0678 0.442 NK_CD56dim L2
ENSG00000134644 PUM1 -497032 sc-eQTL 5.56e-01 0.041 0.0695 0.442 NK_CD56dim L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 4.66e-01 -0.0542 0.0741 0.442 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.57e-01 0.00498 0.0929 0.442 NK_CD56dim L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.27e-01 -0.0168 0.0767 0.442 NK_CD56dim L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 7.01e-01 0.0372 0.0968 0.436 NK_HLA L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 4.54e-01 -0.0648 0.0863 0.436 NK_HLA L2
ENSG00000134644 PUM1 -497032 sc-eQTL 6.55e-01 0.0377 0.0842 0.436 NK_HLA L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.04e-01 -0.0827 0.0802 0.436 NK_HLA L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.98e-01 0.000161 0.0855 0.436 NK_HLA L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 2.79e-01 -0.0895 0.0825 0.436 NK_HLA L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.26e-01 0.0878 0.0892 0.442 NK_cytokine L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 1.89e-01 0.0916 0.0695 0.442 NK_cytokine L2
ENSG00000134644 PUM1 -497032 sc-eQTL 6.31e-01 -0.0363 0.0754 0.442 NK_cytokine L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.31e-01 -0.0809 0.0829 0.442 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 5.32e-01 -0.055 0.088 0.442 NK_cytokine L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 4.48e-01 -0.0622 0.0818 0.442 NK_cytokine L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 9.15e-01 0.0116 0.108 0.47 PB L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.96e-02 -0.211 0.123 0.47 PB L2
ENSG00000134644 PUM1 -497032 sc-eQTL 7.18e-01 -0.0392 0.108 0.47 PB L2
ENSG00000162510 MATN1 -154626 sc-eQTL 5.20e-01 0.065 0.101 0.47 PB L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.39e-01 0.0849 0.0717 0.47 PB L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.11e-01 -0.011 0.0988 0.47 PB L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.47e-01 -0.0482 0.105 0.47 PB L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 1.11e-01 -0.111 0.069 0.437 Pro_T L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 4.99e-01 -0.0597 0.0881 0.437 Pro_T L2
ENSG00000134644 PUM1 -497032 sc-eQTL 4.73e-01 -0.059 0.0821 0.437 Pro_T L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.53e-01 -0.0548 0.0589 0.437 Pro_T L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 6.89e-02 -0.15 0.0818 0.437 Pro_T L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.78e-01 -0.0669 0.0757 0.437 Pro_T L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 1.98e-01 -0.117 0.0905 0.44 Treg L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 9.72e-01 0.00309 0.0879 0.44 Treg L2
ENSG00000134644 PUM1 -497032 sc-eQTL 1.67e-01 0.0972 0.07 0.44 Treg L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 6.20e-01 0.0399 0.0805 0.44 Treg L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.35e-01 -0.0278 0.082 0.44 Treg L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.04e-01 0.0425 0.0819 0.44 Treg L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 2.06e-01 -0.114 0.0901 0.444 cDC L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 9.02e-01 -0.0121 0.098 0.444 cDC L2
ENSG00000134644 PUM1 -497032 sc-eQTL 8.33e-01 0.0178 0.0842 0.444 cDC L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 4.83e-01 0.0414 0.0589 0.444 cDC L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 1.37e-02 0.186 0.0745 0.444 cDC L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 1.79e-01 -0.1 0.0741 0.444 cDC L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 8.75e-02 0.137 0.0795 0.444 cDC L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 6.50e-01 0.0336 0.0739 0.44 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.98e-01 0.0106 0.0825 0.44 cMono_IL1B L2
ENSG00000134644 PUM1 -497032 sc-eQTL 3.02e-03 0.164 0.0547 0.44 cMono_IL1B L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.64e-01 0.0444 0.0489 0.44 cMono_IL1B L2
ENSG00000162512 SDC3 -339799 sc-eQTL 6.36e-02 -0.171 0.0915 0.44 cMono_IL1B L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 2.38e-01 0.11 0.0931 0.44 cMono_IL1B L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 8.35e-01 0.0172 0.0826 0.44 cMono_IL1B L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 6.86e-01 -0.0311 0.077 0.44 cMono_IL1B L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 9.28e-01 0.00704 0.0783 0.44 cMono_S100A L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.57e-01 0.0411 0.0925 0.44 cMono_S100A L2
ENSG00000134644 PUM1 -497032 sc-eQTL 2.11e-01 0.0836 0.0666 0.44 cMono_S100A L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 3.93e-01 0.0439 0.0513 0.44 cMono_S100A L2
ENSG00000162512 SDC3 -339799 sc-eQTL 2.14e-01 -0.11 0.0885 0.44 cMono_S100A L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 6.98e-02 0.17 0.0933 0.44 cMono_S100A L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 7.30e-02 0.137 0.0758 0.44 cMono_S100A L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.54e-01 -0.0711 0.0765 0.44 cMono_S100A L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 1.70e-01 0.155 0.113 0.452 gdT L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 5.80e-01 0.054 0.0973 0.452 gdT L2
ENSG00000134644 PUM1 -497032 sc-eQTL 4.33e-01 0.0787 0.1 0.452 gdT L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 6.34e-01 -0.0521 0.109 0.452 gdT L2
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 7.36e-01 0.034 0.101 0.452 gdT L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 9.79e-02 -0.161 0.0966 0.452 gdT L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.22e-01 0.0853 0.0858 0.436 intMono L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.64e-01 -0.0159 0.0925 0.436 intMono L2
ENSG00000134644 PUM1 -497032 sc-eQTL 5.25e-01 -0.05 0.0784 0.436 intMono L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.54e-01 0.0876 0.0612 0.436 intMono L2
ENSG00000162512 SDC3 -339799 sc-eQTL 8.04e-02 -0.147 0.0836 0.436 intMono L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 4.03e-01 0.0738 0.0881 0.436 intMono L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 9.05e-01 -0.00999 0.0836 0.436 intMono L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 4.88e-01 -0.058 0.0835 0.436 intMono L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 4.51e-01 0.0615 0.0815 0.446 ncMono L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 9.49e-01 0.00555 0.087 0.446 ncMono L2
ENSG00000134644 PUM1 -497032 sc-eQTL 3.69e-01 0.0639 0.0709 0.446 ncMono L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.66e-01 0.0718 0.0643 0.446 ncMono L2
ENSG00000162512 SDC3 -339799 sc-eQTL 7.02e-03 -0.194 0.071 0.446 ncMono L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 6.47e-01 0.0362 0.0789 0.446 ncMono L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 2.23e-01 0.096 0.0786 0.446 ncMono L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.40e-01 -0.0781 0.0816 0.446 ncMono L2
ENSG00000060688 SNRNP40 -727829 sc-eQTL 3.22e-01 -0.0921 0.0926 0.444 pDC L2
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 7.48e-01 -0.0328 0.102 0.444 pDC L2
ENSG00000134644 PUM1 -497032 sc-eQTL 4.91e-02 0.166 0.0835 0.444 pDC L2
ENSG00000162511 LAPTM5 -188815 sc-eQTL 5.31e-01 0.0493 0.0785 0.444 pDC L2
ENSG00000168528 SERINC2 -840606 sc-eQTL 3.28e-01 0.0932 0.0951 0.444 pDC L2
ENSG00000284543 LINC01226 -937267 sc-eQTL 7.42e-01 0.0244 0.074 0.444 pDC L2
ENSG00000287510 AL137857.1 -162734 sc-eQTL 1.49e-01 -0.126 0.0865 0.444 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -727829 sc-eQTL 4.91e-01 0.0629 0.0913 0.44 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.51e-01 0.0143 0.0761 0.44 B_Memory LOneK1K
ENSG00000134644 PUM1 -497032 sc-eQTL 3.76e-01 0.0598 0.0673 0.44 B_Memory LOneK1K
ENSG00000162510 MATN1 -154626 sc-eQTL 5.28e-01 0.0485 0.0768 0.44 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -188815 sc-eQTL 5.23e-01 -0.0309 0.0483 0.44 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 6.53e-01 0.0288 0.0639 0.44 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.38e-01 0.0667 0.0695 0.44 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -727829 sc-eQTL 5.13e-01 0.0548 0.0838 0.44 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 2.57e-02 -0.147 0.0655 0.44 B_Naive LOneK1K
ENSG00000134644 PUM1 -497032 sc-eQTL 3.82e-01 0.0549 0.0626 0.44 B_Naive LOneK1K
ENSG00000162510 MATN1 -154626 sc-eQTL 3.15e-01 -0.0606 0.0602 0.44 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.11e-01 0.0531 0.0423 0.44 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 3.86e-01 -0.0476 0.0548 0.44 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -162734 sc-eQTL 9.28e-01 0.00591 0.0652 0.44 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -727829 sc-eQTL 9.86e-01 -0.00127 0.0708 0.44 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 6.78e-01 0.0333 0.0802 0.44 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -497032 sc-eQTL 2.67e-03 0.152 0.0501 0.44 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.82e-01 0.06 0.0448 0.44 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -339799 sc-eQTL 9.65e-02 -0.152 0.0912 0.44 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -840606 sc-eQTL 1.82e-01 0.126 0.094 0.44 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -937267 sc-eQTL 4.39e-01 0.0599 0.0773 0.44 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -162734 sc-eQTL 5.22e-01 -0.0465 0.0724 0.44 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -727829 sc-eQTL 1.10e-01 0.123 0.0767 0.438 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 8.28e-01 -0.0184 0.0845 0.438 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -497032 sc-eQTL 4.77e-01 0.0493 0.0691 0.438 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -188815 sc-eQTL 1.75e-01 0.0751 0.0551 0.438 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -339799 sc-eQTL 2.33e-02 -0.183 0.0799 0.438 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -840606 sc-eQTL 5.44e-01 0.0509 0.0838 0.438 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -937267 sc-eQTL 4.23e-01 0.0639 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -162734 sc-eQTL 2.66e-01 -0.0887 0.0795 0.438 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -727829 sc-eQTL 5.06e-01 0.058 0.087 0.442 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -728023 sc-eQTL 3.55e-01 0.055 0.0594 0.442 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -497032 sc-eQTL 4.94e-01 0.0446 0.0651 0.442 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -188815 sc-eQTL 2.76e-01 -0.0794 0.0726 0.442 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -149545 sc-eQTL 9.82e-01 0.00185 0.084 0.442 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -162734 sc-eQTL 3.82e-01 -0.0634 0.0724 0.442 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -937322 2.74e-07 1.25e-07 4.08e-08 1.8e-07 9.16e-08 1e-07 1.49e-07 5.37e-08 1.45e-07 4.74e-08 1.62e-07 8.55e-08 1.41e-07 6.56e-08 6.17e-08 7.3e-08 3.87e-08 1.26e-07 5.82e-08 4.04e-08 1.08e-07 1.28e-07 1.39e-07 3.49e-08 1.4e-07 1.14e-07 1.07e-07 9.57e-08 1.09e-07 1.02e-07 9.7e-08 3.64e-08 3.56e-08 8.55e-08 8.38e-08 3.94e-08 5.03e-08 9.25e-08 6.54e-08 3.98e-08 5.13e-08 1.33e-07 4.89e-08 1.76e-08 5.15e-08 1.99e-08 1.21e-07 3.89e-09 4.94e-08