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Genes within 1Mb (chr1:30557646:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -739142 sc-eQTL 9.94e-01 0.00114 0.148 0.927 B L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.38e-01 -0.113 0.118 0.927 B L1
ENSG00000134644 PUM1 -508345 sc-eQTL 4.09e-01 0.082 0.099 0.927 B L1
ENSG00000162510 MATN1 -165939 sc-eQTL 1.95e-01 0.135 0.104 0.927 B L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.69e-01 -0.00323 0.0817 0.927 B L1
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.98e-01 -0.0809 0.0955 0.927 B L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.46e-01 -0.131 0.113 0.927 B L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 2.09e-01 -0.16 0.127 0.927 CD4T L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.38e-01 0.0203 0.0993 0.927 CD4T L1
ENSG00000134644 PUM1 -508345 sc-eQTL 2.54e-01 0.101 0.0881 0.927 CD4T L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.02e-01 -0.0376 0.0979 0.927 CD4T L1
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 2.54e-01 -0.0998 0.0874 0.927 CD4T L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 1.68e-02 -0.25 0.104 0.927 CD4T L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 4.43e-01 -0.129 0.167 0.927 CD8T L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.34e-01 -0.108 0.111 0.927 CD8T L1
ENSG00000134644 PUM1 -508345 sc-eQTL 1.87e-01 0.129 0.0978 0.927 CD8T L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 3.14e-01 -0.0959 0.0951 0.927 CD8T L1
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 5.94e-01 -0.0596 0.112 0.927 CD8T L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 1.17e-01 -0.22 0.14 0.927 CD8T L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.11e-01 -0.238 0.149 0.93 DC L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 1.00e-01 -0.29 0.176 0.93 DC L1
ENSG00000134644 PUM1 -508345 sc-eQTL 4.31e-01 -0.109 0.139 0.93 DC L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 3.61e-01 0.0905 0.0989 0.93 DC L1
ENSG00000168528 SERINC2 -851919 sc-eQTL 2.40e-01 -0.192 0.163 0.93 DC L1
ENSG00000284543 LINC01226 -948580 sc-eQTL 3.85e-01 -0.0942 0.108 0.93 DC L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 5.28e-01 -0.0989 0.157 0.93 DC L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 4.26e-01 -0.0919 0.115 0.927 Mono L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.21e-01 -0.0323 0.143 0.927 Mono L1
ENSG00000134644 PUM1 -508345 sc-eQTL 4.49e-01 0.0695 0.0916 0.927 Mono L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 6.77e-01 -0.0352 0.0843 0.927 Mono L1
ENSG00000162512 SDC3 -351112 sc-eQTL 8.92e-02 0.275 0.161 0.927 Mono L1
ENSG00000168528 SERINC2 -851919 sc-eQTL 2.25e-01 -0.211 0.173 0.927 Mono L1
ENSG00000284543 LINC01226 -948580 sc-eQTL 6.14e-01 -0.0774 0.153 0.927 Mono L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 5.08e-01 0.0888 0.134 0.927 Mono L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 6.51e-01 0.0748 0.165 0.929 NK L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 9.26e-01 0.0105 0.113 0.929 NK L1
ENSG00000134644 PUM1 -508345 sc-eQTL 4.13e-01 0.0972 0.118 0.929 NK L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 1.98e-01 0.176 0.136 0.929 NK L1
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 7.88e-01 -0.0413 0.153 0.929 NK L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 3.02e-02 -0.306 0.14 0.929 NK L1
ENSG00000060688 SNRNP40 -739142 sc-eQTL 8.64e-02 0.209 0.121 0.927 Other_T L1
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 1.51e-01 0.187 0.13 0.927 Other_T L1
ENSG00000134644 PUM1 -508345 sc-eQTL 4.03e-01 0.0983 0.117 0.927 Other_T L1
ENSG00000162511 LAPTM5 -200128 sc-eQTL 3.01e-01 -0.0996 0.0961 0.927 Other_T L1
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 1.93e-01 -0.205 0.157 0.927 Other_T L1
ENSG00000287510 AL137857.1 -174047 sc-eQTL 3.29e-01 -0.16 0.164 0.927 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -739142 sc-eQTL 9.11e-01 0.021 0.187 0.923 B_Activated L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 9.64e-01 0.00846 0.188 0.923 B_Activated L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.39e-01 -0.206 0.174 0.923 B_Activated L2
ENSG00000162510 MATN1 -165939 sc-eQTL 3.18e-01 -0.153 0.152 0.923 B_Activated L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 4.72e-01 0.0767 0.106 0.923 B_Activated L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 2.67e-01 0.191 0.171 0.923 B_Activated L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 7.87e-01 0.0412 0.152 0.923 B_Activated L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 7.25e-01 -0.0646 0.183 0.927 B_Intermediate L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 6.66e-01 -0.066 0.153 0.927 B_Intermediate L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.37e-01 0.17 0.144 0.927 B_Intermediate L2
ENSG00000162510 MATN1 -165939 sc-eQTL 3.57e-01 0.138 0.15 0.927 B_Intermediate L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 8.28e-01 0.02 0.092 0.927 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.07e-01 -0.107 0.129 0.927 B_Intermediate L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 5.05e-01 -0.0964 0.144 0.927 B_Intermediate L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.37e-01 0.265 0.177 0.927 B_Memory L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 9.46e-01 -0.0111 0.164 0.927 B_Memory L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.53e-01 0.133 0.143 0.927 B_Memory L2
ENSG00000162510 MATN1 -165939 sc-eQTL 1.34e-01 -0.205 0.136 0.927 B_Memory L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.81e-01 -0.0337 0.121 0.927 B_Memory L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 2.03e-01 -0.177 0.138 0.927 B_Memory L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.20e-01 0.199 0.162 0.927 B_Memory L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 9.16e-01 -0.017 0.16 0.927 B_Naive1 L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.04e-01 -0.176 0.138 0.927 B_Naive1 L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.02e-01 0.156 0.122 0.927 B_Naive1 L2
ENSG00000162510 MATN1 -165939 sc-eQTL 1.23e-01 0.191 0.123 0.927 B_Naive1 L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.59e-01 0.0254 0.0827 0.927 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.73e-01 -0.0781 0.109 0.927 B_Naive1 L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.80e-01 -0.145 0.134 0.927 B_Naive1 L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 2.80e-02 -0.373 0.169 0.927 B_Naive2 L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.38e-01 0.0288 0.141 0.927 B_Naive2 L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.10e-01 -0.14 0.138 0.927 B_Naive2 L2
ENSG00000162510 MATN1 -165939 sc-eQTL 5.62e-01 0.0768 0.132 0.927 B_Naive2 L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.88e-01 0.0242 0.0899 0.927 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.83e-01 0.114 0.131 0.927 B_Naive2 L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.59e-01 0.0251 0.141 0.927 B_Naive2 L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.55e-01 0.242 0.17 0.927 CD4_CTL L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.65e-01 0.0285 0.168 0.927 CD4_CTL L2
ENSG00000134644 PUM1 -508345 sc-eQTL 1.42e-03 -0.518 0.16 0.927 CD4_CTL L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.37e-01 -0.0115 0.147 0.927 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.52e-01 0.121 0.16 0.927 CD4_CTL L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 5.88e-01 -0.0767 0.141 0.927 CD4_CTL L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.39e-01 -0.198 0.133 0.927 CD4_Naive L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.56e-01 0.0215 0.119 0.927 CD4_Naive L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.02e-01 0.121 0.0944 0.927 CD4_Naive L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.91e-01 -0.00112 0.102 0.927 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 1.54e-01 -0.147 0.103 0.927 CD4_Naive L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.92e-02 -0.201 0.118 0.927 CD4_Naive L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.99e-01 -0.215 0.167 0.927 CD4_TCM L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.99e-01 0.14 0.135 0.927 CD4_TCM L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.46e-01 0.138 0.119 0.927 CD4_TCM L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 6.28e-01 -0.048 0.099 0.927 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 7.19e-01 -0.0452 0.126 0.927 CD4_TCM L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 6.59e-01 -0.0618 0.14 0.927 CD4_TCM L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 2.61e-01 -0.189 0.168 0.927 CD4_TEM L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.79e-01 -0.174 0.16 0.927 CD4_TEM L2
ENSG00000134644 PUM1 -508345 sc-eQTL 8.99e-01 0.0169 0.134 0.927 CD4_TEM L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 5.47e-01 0.0814 0.135 0.927 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.69e-01 -0.114 0.158 0.927 CD4_TEM L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 6.56e-01 -0.0694 0.156 0.927 CD4_TEM L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 3.64e-02 -0.38 0.181 0.927 CD8_CTL L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.30e-01 -0.136 0.14 0.927 CD8_CTL L2
ENSG00000134644 PUM1 -508345 sc-eQTL 6.85e-01 0.0551 0.136 0.927 CD8_CTL L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.59e-01 -0.0462 0.15 0.927 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 8.75e-01 0.025 0.158 0.927 CD8_CTL L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 9.69e-01 0.00574 0.149 0.927 CD8_CTL L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.72e-01 0.227 0.166 0.927 CD8_Naive L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.74e-01 0.157 0.143 0.927 CD8_Naive L2
ENSG00000134644 PUM1 -508345 sc-eQTL 6.17e-02 0.215 0.115 0.927 CD8_Naive L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 5.17e-01 -0.0718 0.111 0.927 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 1.46e-01 -0.2 0.137 0.927 CD8_Naive L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 4.78e-01 -0.107 0.15 0.927 CD8_Naive L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 1.08e-01 -0.306 0.19 0.931 CD8_TCM L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 7.72e-01 -0.0507 0.175 0.931 CD8_TCM L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.44e-01 0.156 0.164 0.931 CD8_TCM L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.71e-01 -0.00619 0.172 0.931 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.29e-01 0.156 0.159 0.931 CD8_TCM L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 9.23e-01 -0.0157 0.161 0.931 CD8_TCM L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 6.92e-02 0.32 0.175 0.925 CD8_TEM L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.49e-01 -0.158 0.169 0.925 CD8_TEM L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.99e-01 -0.18 0.172 0.925 CD8_TEM L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 6.69e-02 -0.297 0.161 0.925 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.41e-01 -0.161 0.168 0.925 CD8_TEM L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 6.46e-01 0.0703 0.153 0.925 CD8_TEM L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 9.94e-01 0.00131 0.179 0.926 MAIT L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 9.85e-01 0.00295 0.159 0.926 MAIT L2
ENSG00000134644 PUM1 -508345 sc-eQTL 7.59e-01 0.0468 0.152 0.926 MAIT L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.58e-01 -0.0075 0.143 0.926 MAIT L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.22e-01 -0.128 0.16 0.926 MAIT L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.26e-01 0.0363 0.165 0.926 MAIT L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 7.82e-01 -0.0504 0.182 0.929 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 7.60e-01 0.0471 0.154 0.929 NK_CD56bright L2
ENSG00000134644 PUM1 -508345 sc-eQTL 4.98e-01 -0.11 0.161 0.929 NK_CD56bright L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 2.39e-01 0.187 0.159 0.929 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 1.63e-01 -0.223 0.159 0.929 NK_CD56bright L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 6.02e-01 -0.0824 0.158 0.929 NK_CD56bright L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 7.20e-01 -0.0631 0.176 0.929 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 4.77e-01 0.0924 0.13 0.929 NK_CD56dim L2
ENSG00000134644 PUM1 -508345 sc-eQTL 1.27e-01 0.203 0.133 0.929 NK_CD56dim L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 8.70e-02 0.243 0.141 0.929 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 7.13e-01 -0.0656 0.178 0.929 NK_CD56dim L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.87e-01 -0.156 0.146 0.929 NK_CD56dim L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 7.81e-01 0.0509 0.183 0.925 NK_HLA L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.82e-01 -0.175 0.163 0.925 NK_HLA L2
ENSG00000134644 PUM1 -508345 sc-eQTL 6.64e-01 -0.0692 0.159 0.925 NK_HLA L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 3.90e-01 0.13 0.151 0.925 NK_HLA L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 6.91e-01 -0.0643 0.161 0.925 NK_HLA L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 9.07e-01 0.0183 0.156 0.925 NK_HLA L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 5.76e-01 0.0968 0.173 0.929 NK_cytokine L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 7.00e-01 0.052 0.135 0.929 NK_cytokine L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.10e-01 -0.148 0.145 0.929 NK_cytokine L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 3.01e-01 0.166 0.16 0.929 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.71e-01 0.152 0.17 0.929 NK_cytokine L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.83e-01 -0.17 0.158 0.929 NK_cytokine L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 6.12e-02 -0.366 0.194 0.93 PB L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.54e-01 -0.0421 0.228 0.93 PB L2
ENSG00000134644 PUM1 -508345 sc-eQTL 5.99e-01 -0.104 0.198 0.93 PB L2
ENSG00000162510 MATN1 -165939 sc-eQTL 9.67e-01 0.00768 0.185 0.93 PB L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.99e-03 0.336 0.128 0.93 PB L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 8.55e-01 -0.0332 0.181 0.93 PB L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.49e-01 0.0368 0.192 0.93 PB L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 7.30e-01 -0.0457 0.132 0.926 Pro_T L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.99e-01 0.175 0.168 0.926 Pro_T L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.35e-01 0.151 0.156 0.926 Pro_T L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 5.50e-01 -0.0672 0.112 0.926 Pro_T L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 1.66e-01 -0.217 0.156 0.926 Pro_T L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 6.97e-01 -0.0563 0.144 0.926 Pro_T L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 5.97e-01 -0.0909 0.172 0.927 Treg L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 5.10e-01 -0.109 0.166 0.927 Treg L2
ENSG00000134644 PUM1 -508345 sc-eQTL 7.62e-02 0.235 0.132 0.927 Treg L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 7.99e-01 -0.0388 0.152 0.927 Treg L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 5.39e-01 -0.0954 0.155 0.927 Treg L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 2.35e-01 0.184 0.155 0.927 Treg L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 8.56e-03 -0.473 0.178 0.934 cDC L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.52e-01 -0.225 0.196 0.934 cDC L2
ENSG00000134644 PUM1 -508345 sc-eQTL 8.90e-01 0.0233 0.169 0.934 cDC L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 8.03e-01 0.0296 0.118 0.934 cDC L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 7.42e-02 -0.27 0.151 0.934 cDC L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 5.73e-01 -0.0843 0.149 0.934 cDC L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.84e-01 -0.0234 0.161 0.934 cDC L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 5.23e-01 -0.0897 0.14 0.927 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 5.82e-01 -0.0862 0.156 0.927 cMono_IL1B L2
ENSG00000134644 PUM1 -508345 sc-eQTL 2.99e-01 0.11 0.106 0.927 cMono_IL1B L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.23e-01 -0.00897 0.093 0.927 cMono_IL1B L2
ENSG00000162512 SDC3 -351112 sc-eQTL 1.27e-01 0.267 0.174 0.927 cMono_IL1B L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 2.96e-01 -0.185 0.177 0.927 cMono_IL1B L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 8.85e-01 0.0227 0.157 0.927 cMono_IL1B L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 4.14e-01 0.12 0.146 0.927 cMono_IL1B L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 8.48e-01 -0.0283 0.148 0.927 cMono_S100A L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.46e-01 -0.034 0.174 0.927 cMono_S100A L2
ENSG00000134644 PUM1 -508345 sc-eQTL 7.54e-01 0.0396 0.126 0.927 cMono_S100A L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.02e-01 0.0119 0.0969 0.927 cMono_S100A L2
ENSG00000162512 SDC3 -351112 sc-eQTL 3.07e-01 -0.171 0.167 0.927 cMono_S100A L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 1.76e-01 -0.24 0.177 0.927 cMono_S100A L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 3.71e-01 -0.129 0.144 0.927 cMono_S100A L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 7.24e-01 -0.0512 0.145 0.927 cMono_S100A L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 5.38e-01 0.132 0.213 0.927 gdT L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.20e-01 0.0417 0.183 0.927 gdT L2
ENSG00000134644 PUM1 -508345 sc-eQTL 5.78e-01 -0.105 0.189 0.927 gdT L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 2.18e-01 -0.253 0.204 0.927 gdT L2
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 3.63e-01 -0.172 0.189 0.927 gdT L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 9.58e-02 -0.305 0.182 0.927 gdT L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 4.29e-01 -0.13 0.164 0.931 intMono L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 2.99e-01 0.184 0.176 0.931 intMono L2
ENSG00000134644 PUM1 -508345 sc-eQTL 1.46e-01 0.218 0.149 0.931 intMono L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 4.58e-01 0.0874 0.117 0.931 intMono L2
ENSG00000162512 SDC3 -351112 sc-eQTL 3.24e-01 0.159 0.161 0.931 intMono L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 5.77e-01 -0.0941 0.168 0.931 intMono L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 8.30e-01 0.0344 0.16 0.931 intMono L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 1.78e-01 -0.215 0.159 0.931 intMono L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 6.25e-01 0.0761 0.155 0.932 ncMono L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 7.37e-01 0.0558 0.166 0.932 ncMono L2
ENSG00000134644 PUM1 -508345 sc-eQTL 3.79e-01 0.119 0.135 0.932 ncMono L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 6.54e-01 -0.0552 0.123 0.932 ncMono L2
ENSG00000162512 SDC3 -351112 sc-eQTL 4.16e-01 -0.112 0.138 0.932 ncMono L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 3.50e-01 -0.141 0.15 0.932 ncMono L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 8.97e-01 0.0196 0.15 0.932 ncMono L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.70e-01 -0.0256 0.156 0.932 ncMono L2
ENSG00000060688 SNRNP40 -739142 sc-eQTL 3.95e-01 -0.167 0.196 0.941 pDC L2
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 5.02e-01 -0.145 0.215 0.941 pDC L2
ENSG00000134644 PUM1 -508345 sc-eQTL 9.06e-01 0.021 0.179 0.941 pDC L2
ENSG00000162511 LAPTM5 -200128 sc-eQTL 8.10e-01 0.04 0.166 0.941 pDC L2
ENSG00000168528 SERINC2 -851919 sc-eQTL 3.26e-01 0.198 0.201 0.941 pDC L2
ENSG00000284543 LINC01226 -948580 sc-eQTL 9.10e-01 -0.0178 0.156 0.941 pDC L2
ENSG00000287510 AL137857.1 -174047 sc-eQTL 3.46e-01 -0.174 0.184 0.941 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -739142 sc-eQTL 9.58e-01 0.00933 0.176 0.927 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 7.04e-01 -0.0556 0.146 0.927 B_Memory LOneK1K
ENSG00000134644 PUM1 -508345 sc-eQTL 2.48e-01 0.149 0.129 0.927 B_Memory LOneK1K
ENSG00000162510 MATN1 -165939 sc-eQTL 8.75e-01 0.0232 0.148 0.927 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -200128 sc-eQTL 9.17e-01 0.00973 0.0928 0.927 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 4.29e-01 -0.0972 0.123 0.927 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -174047 sc-eQTL 8.70e-01 -0.022 0.134 0.927 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -739142 sc-eQTL 5.76e-01 -0.0873 0.156 0.927 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.73e-01 -0.11 0.123 0.927 B_Naive LOneK1K
ENSG00000134644 PUM1 -508345 sc-eQTL 3.24e-01 0.115 0.116 0.927 B_Naive LOneK1K
ENSG00000162510 MATN1 -165939 sc-eQTL 1.56e-01 0.159 0.112 0.927 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -200128 sc-eQTL 4.96e-01 0.0539 0.079 0.927 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 7.16e-01 -0.0372 0.102 0.927 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -174047 sc-eQTL 4.38e-01 -0.0942 0.121 0.927 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -739142 sc-eQTL 4.07e-01 -0.109 0.131 0.927 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 3.28e-01 -0.146 0.149 0.927 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -508345 sc-eQTL 5.04e-01 0.0636 0.095 0.927 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -200128 sc-eQTL 8.85e-01 -0.0121 0.0836 0.927 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -351112 sc-eQTL 4.55e-01 0.127 0.17 0.927 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -851919 sc-eQTL 2.53e-01 -0.201 0.175 0.927 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -948580 sc-eQTL 7.76e-01 -0.041 0.144 0.927 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -174047 sc-eQTL 5.07e-01 0.0895 0.135 0.927 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -739142 sc-eQTL 6.00e-01 0.0772 0.147 0.929 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 1.28e-01 0.244 0.16 0.929 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -508345 sc-eQTL 5.36e-01 0.0817 0.132 0.929 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -200128 sc-eQTL 4.13e-01 -0.0863 0.105 0.929 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -351112 sc-eQTL 2.96e-01 0.161 0.154 0.929 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -851919 sc-eQTL 4.00e-01 -0.134 0.159 0.929 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -948580 sc-eQTL 8.96e-01 0.0198 0.152 0.929 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -174047 sc-eQTL 4.09e-01 -0.125 0.152 0.929 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -739142 sc-eQTL 8.23e-01 0.0371 0.166 0.929 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -739336 sc-eQTL 8.13e-01 0.0269 0.113 0.929 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -508345 sc-eQTL 4.37e-01 0.0966 0.124 0.929 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -200128 sc-eQTL 2.11e-01 0.173 0.138 0.929 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -160858 sc-eQTL 8.06e-01 0.0393 0.16 0.929 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -174047 sc-eQTL 9.66e-02 -0.229 0.137 0.929 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000121766 \N -739336 2.8e-07 1.36e-07 5.35e-08 1.97e-07 9.8e-08 8.45e-08 1.73e-07 5.85e-08 1.5e-07 6.4e-08 1.73e-07 1.15e-07 1.79e-07 7.64e-08 5.82e-08 7.97e-08 4.31e-08 1.44e-07 6.32e-08 5.07e-08 1.25e-07 1.26e-07 1.58e-07 2.83e-08 1.68e-07 1.23e-07 1.12e-07 1.06e-07 1.24e-07 1.03e-07 1.08e-07 3.55e-08 3.51e-08 8.7e-08 3.81e-08 3.22e-08 5.65e-08 8.89e-08 6.42e-08 3.67e-08 5.71e-08 1.46e-07 5.24e-08 1.2e-08 3.81e-08 1.77e-08 1e-07 1.92e-09 4.99e-08