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Genes within 1Mb (chr1:30556126:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -740662 sc-eQTL 7.17e-01 0.0284 0.0784 0.438 B L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 1.47e-01 -0.0909 0.0625 0.438 B L1
ENSG00000134644 PUM1 -509865 sc-eQTL 8.09e-01 0.0127 0.0527 0.438 B L1
ENSG00000162510 MATN1 -167459 sc-eQTL 5.17e-01 -0.036 0.0553 0.438 B L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 1.70e-01 -0.0595 0.0432 0.438 B L1
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 7.78e-01 -0.0143 0.0508 0.438 B L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 8.95e-01 -0.00794 0.0602 0.438 B L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.25e-01 -0.054 0.0675 0.438 CD4T L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.89e-01 -0.0212 0.0528 0.438 CD4T L1
ENSG00000134644 PUM1 -509865 sc-eQTL 5.99e-01 0.0248 0.047 0.438 CD4T L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.67e-01 0.0225 0.0521 0.438 CD4T L1
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 5.83e-01 -0.0256 0.0466 0.438 CD4T L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 5.99e-01 -0.0294 0.0558 0.438 CD4T L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.49e-01 -0.102 0.0885 0.438 CD8T L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 2.38e-01 -0.0696 0.0589 0.438 CD8T L1
ENSG00000134644 PUM1 -509865 sc-eQTL 3.56e-01 0.048 0.0519 0.438 CD8T L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 1.40e-01 -0.0744 0.0503 0.438 CD8T L1
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 5.47e-01 -0.0357 0.0592 0.438 CD8T L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 2.83e-01 -0.0799 0.0742 0.438 CD8T L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 1.85e-01 -0.105 0.0793 0.437 DC L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 1.47e-01 -0.137 0.0938 0.437 DC L1
ENSG00000134644 PUM1 -509865 sc-eQTL 7.12e-01 0.0273 0.0738 0.437 DC L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.50e-01 0.0606 0.0526 0.437 DC L1
ENSG00000168528 SERINC2 -853439 sc-eQTL 1.83e-01 0.116 0.0866 0.437 DC L1
ENSG00000284543 LINC01226 -950100 sc-eQTL 3.59e-01 0.0528 0.0575 0.437 DC L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 1.52e-01 0.119 0.083 0.437 DC L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.01e-01 0.0327 0.0623 0.438 Mono L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.60e-01 0.034 0.0773 0.438 Mono L1
ENSG00000134644 PUM1 -509865 sc-eQTL 1.99e-03 0.152 0.0485 0.438 Mono L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 1.66e-01 0.0631 0.0454 0.438 Mono L1
ENSG00000162512 SDC3 -352632 sc-eQTL 2.25e-02 -0.199 0.0865 0.438 Mono L1
ENSG00000168528 SERINC2 -853439 sc-eQTL 1.62e-01 0.131 0.0936 0.438 Mono L1
ENSG00000284543 LINC01226 -950100 sc-eQTL 1.82e-01 0.11 0.0825 0.438 Mono L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 4.18e-01 -0.0587 0.0723 0.438 Mono L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 3.09e-01 0.0889 0.0871 0.438 NK L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.39e-01 0.0281 0.0597 0.438 NK L1
ENSG00000134644 PUM1 -509865 sc-eQTL 5.76e-01 0.0351 0.0626 0.438 NK L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.72e-01 -0.0644 0.072 0.438 NK L1
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 8.99e-01 -0.0103 0.0811 0.438 NK L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 4.62e-01 -0.0551 0.0748 0.438 NK L1
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.08e-01 -0.0335 0.0651 0.438 Other_T L1
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 3.58e-01 -0.064 0.0695 0.438 Other_T L1
ENSG00000134644 PUM1 -509865 sc-eQTL 9.04e-01 -0.00758 0.0626 0.438 Other_T L1
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.35e-01 -0.0243 0.0513 0.438 Other_T L1
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 6.84e-01 -0.0342 0.084 0.438 Other_T L1
ENSG00000287510 AL137857.1 -175567 sc-eQTL 4.57e-01 -0.065 0.0874 0.438 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.44e-01 0.082 0.107 0.436 B_Activated L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.77e-01 -0.0451 0.108 0.436 B_Activated L2
ENSG00000134644 PUM1 -509865 sc-eQTL 8.59e-02 -0.172 0.0996 0.436 B_Activated L2
ENSG00000162510 MATN1 -167459 sc-eQTL 8.28e-01 0.0192 0.0878 0.436 B_Activated L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.00e-01 -0.0321 0.0612 0.436 B_Activated L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 1.07e-01 0.159 0.0981 0.436 B_Activated L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 8.03e-01 -0.0218 0.0875 0.436 B_Activated L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 7.53e-01 -0.0307 0.0975 0.44 B_Intermediate L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.45e-01 0.0375 0.0813 0.44 B_Intermediate L2
ENSG00000134644 PUM1 -509865 sc-eQTL 3.42e-01 0.0729 0.0765 0.44 B_Intermediate L2
ENSG00000162510 MATN1 -167459 sc-eQTL 6.38e-01 0.0376 0.0798 0.44 B_Intermediate L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 7.28e-01 -0.017 0.049 0.44 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 3.64e-01 -0.0625 0.0686 0.44 B_Intermediate L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.65e-02 0.136 0.0764 0.44 B_Intermediate L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.15e-01 0.0474 0.094 0.44 B_Memory L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 5.68e-01 -0.0495 0.0866 0.44 B_Memory L2
ENSG00000134644 PUM1 -509865 sc-eQTL 9.52e-01 -0.00452 0.0754 0.44 B_Memory L2
ENSG00000162510 MATN1 -167459 sc-eQTL 6.86e-01 0.0292 0.0721 0.44 B_Memory L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.39e-01 -0.0753 0.0638 0.44 B_Memory L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 1.59e-01 0.103 0.0729 0.44 B_Memory L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.07e-01 0.0322 0.0857 0.44 B_Memory L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.79e-01 0.0607 0.0857 0.438 B_Naive1 L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.71e-02 -0.135 0.0735 0.438 B_Naive1 L2
ENSG00000134644 PUM1 -509865 sc-eQTL 8.29e-01 -0.0141 0.0654 0.438 B_Naive1 L2
ENSG00000162510 MATN1 -167459 sc-eQTL 3.39e-01 -0.0634 0.0662 0.438 B_Naive1 L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.08e-01 0.0227 0.0443 0.438 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 5.05e-01 -0.0388 0.0581 0.438 B_Naive1 L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.31e-01 -0.0248 0.0718 0.438 B_Naive1 L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 8.41e-01 -0.0186 0.0929 0.438 B_Naive2 L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 6.94e-02 -0.139 0.0761 0.438 B_Naive2 L2
ENSG00000134644 PUM1 -509865 sc-eQTL 6.66e-01 0.0324 0.075 0.438 B_Naive2 L2
ENSG00000162510 MATN1 -167459 sc-eQTL 7.43e-01 -0.0236 0.072 0.438 B_Naive2 L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 8.98e-01 0.00625 0.0489 0.438 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 4.81e-01 0.0503 0.0711 0.438 B_Naive2 L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 8.09e-01 -0.0187 0.0769 0.438 B_Naive2 L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.89e-01 0.0367 0.0915 0.434 CD4_CTL L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 5.73e-01 -0.0507 0.0899 0.434 CD4_CTL L2
ENSG00000134644 PUM1 -509865 sc-eQTL 5.56e-01 0.052 0.0882 0.434 CD4_CTL L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.22e-01 -0.078 0.0785 0.434 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 4.09e-01 0.0711 0.0859 0.434 CD4_CTL L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.55e-01 0.0703 0.0758 0.434 CD4_CTL L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 3.58e-01 -0.0648 0.0704 0.438 CD4_Naive L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 9.07e-01 -0.0073 0.0625 0.438 CD4_Naive L2
ENSG00000134644 PUM1 -509865 sc-eQTL 9.08e-01 -0.00575 0.0499 0.438 CD4_Naive L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 8.05e-01 0.0132 0.0535 0.438 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 1.02e-01 -0.0885 0.0539 0.438 CD4_Naive L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 6.86e-01 -0.0253 0.0623 0.438 CD4_Naive L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.57e-01 -0.0394 0.0887 0.438 CD4_TCM L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 3.55e-01 -0.0662 0.0714 0.438 CD4_TCM L2
ENSG00000134644 PUM1 -509865 sc-eQTL 8.53e-01 0.0117 0.0633 0.438 CD4_TCM L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 4.78e-01 0.0373 0.0525 0.438 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 3.00e-01 0.0691 0.0665 0.438 CD4_TCM L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.56e-01 -0.0685 0.0741 0.438 CD4_TCM L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 3.41e-01 -0.0842 0.0882 0.438 CD4_TEM L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.61e-02 0.144 0.0836 0.438 CD4_TEM L2
ENSG00000134644 PUM1 -509865 sc-eQTL 8.92e-02 0.119 0.0696 0.438 CD4_TEM L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.09e-01 -0.0364 0.0709 0.438 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 3.63e-01 -0.0755 0.0828 0.438 CD4_TEM L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 2.03e-01 0.104 0.0815 0.438 CD4_TEM L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 3.82e-02 -0.201 0.0962 0.438 CD8_CTL L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 7.37e-01 -0.0251 0.0745 0.438 CD8_CTL L2
ENSG00000134644 PUM1 -509865 sc-eQTL 1.47e-01 0.105 0.072 0.438 CD8_CTL L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.85e-01 -0.0858 0.08 0.438 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 2.80e-01 -0.091 0.084 0.438 CD8_CTL L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 4.41e-01 -0.0611 0.0792 0.438 CD8_CTL L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 5.61e-01 0.0513 0.088 0.438 CD8_Naive L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 4.02e-01 -0.0637 0.0758 0.438 CD8_Naive L2
ENSG00000134644 PUM1 -509865 sc-eQTL 2.84e-01 0.0655 0.061 0.438 CD8_Naive L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.86e-01 0.0625 0.0584 0.438 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 3.87e-01 -0.0633 0.073 0.438 CD8_Naive L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 8.91e-01 -0.0109 0.0796 0.438 CD8_Naive L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 1.06e-02 -0.249 0.0963 0.438 CD8_TCM L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 9.27e-01 0.00829 0.0898 0.438 CD8_TCM L2
ENSG00000134644 PUM1 -509865 sc-eQTL 2.77e-01 -0.0917 0.0842 0.438 CD8_TCM L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 1.08e-01 -0.142 0.0878 0.438 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 6.85e-01 -0.0332 0.0818 0.438 CD8_TCM L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.71e-01 -0.0241 0.0827 0.438 CD8_TCM L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.03e-01 0.116 0.091 0.445 CD8_TEM L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 3.45e-02 -0.184 0.0867 0.445 CD8_TEM L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.77e-01 -0.0637 0.0895 0.445 CD8_TEM L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.31e-01 -0.101 0.0839 0.445 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 8.97e-01 0.0113 0.0874 0.445 CD8_TEM L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 6.12e-01 -0.0402 0.0791 0.445 CD8_TEM L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.44e-01 -0.108 0.0928 0.437 MAIT L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 5.34e-01 -0.0513 0.0824 0.437 MAIT L2
ENSG00000134644 PUM1 -509865 sc-eQTL 5.93e-01 -0.0423 0.079 0.437 MAIT L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 5.41e-01 0.0457 0.0745 0.437 MAIT L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 8.41e-01 0.0167 0.0831 0.437 MAIT L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 9.52e-01 -0.00512 0.0856 0.437 MAIT L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.61e-01 0.0715 0.0968 0.442 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 5.11e-01 0.0539 0.0818 0.442 NK_CD56bright L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.99e-01 0.0582 0.0859 0.442 NK_CD56bright L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 9.67e-01 0.00355 0.0848 0.442 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 8.51e-01 -0.0161 0.0852 0.442 NK_CD56bright L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 9.58e-01 0.00446 0.084 0.442 NK_CD56bright L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.76e-01 -0.0386 0.0923 0.44 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.03e-01 0.017 0.0682 0.44 NK_CD56dim L2
ENSG00000134644 PUM1 -509865 sc-eQTL 6.66e-01 0.0303 0.07 0.44 NK_CD56dim L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 4.15e-01 -0.0609 0.0746 0.44 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 9.79e-01 -0.00247 0.0936 0.44 NK_CD56dim L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 9.36e-01 -0.00618 0.0772 0.44 NK_CD56dim L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 6.20e-01 0.0482 0.0968 0.434 NK_HLA L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 4.84e-01 -0.0606 0.0864 0.434 NK_HLA L2
ENSG00000134644 PUM1 -509865 sc-eQTL 7.63e-01 0.0254 0.0843 0.434 NK_HLA L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.05e-01 -0.0825 0.0803 0.434 NK_HLA L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 9.76e-01 0.0026 0.0856 0.434 NK_HLA L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.15e-01 -0.0831 0.0826 0.434 NK_HLA L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 3.71e-01 0.0806 0.09 0.44 NK_cytokine L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 1.84e-01 0.0934 0.0701 0.44 NK_cytokine L2
ENSG00000134644 PUM1 -509865 sc-eQTL 5.67e-01 -0.0436 0.076 0.44 NK_cytokine L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.47e-01 -0.0788 0.0836 0.44 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 4.71e-01 -0.064 0.0887 0.44 NK_cytokine L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 5.08e-01 -0.0548 0.0825 0.44 NK_cytokine L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 8.85e-01 0.0159 0.11 0.467 PB L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 1.04e-01 -0.206 0.126 0.467 PB L2
ENSG00000134644 PUM1 -509865 sc-eQTL 9.84e-01 -0.00225 0.11 0.467 PB L2
ENSG00000162510 MATN1 -167459 sc-eQTL 7.86e-01 0.0279 0.103 0.467 PB L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.80e-01 0.0794 0.0731 0.467 PB L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 6.79e-01 -0.0417 0.101 0.467 PB L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 6.44e-01 -0.0496 0.107 0.467 PB L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 1.52e-01 -0.1 0.0696 0.435 Pro_T L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 5.37e-01 -0.0549 0.0887 0.435 Pro_T L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.55e-01 -0.062 0.0827 0.435 Pro_T L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.54e-01 -0.0551 0.0593 0.435 Pro_T L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 5.27e-02 -0.16 0.0823 0.435 Pro_T L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.61e-01 -0.0698 0.0762 0.435 Pro_T L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.28e-01 -0.11 0.0913 0.438 Treg L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.99e-01 0.0112 0.0886 0.438 Treg L2
ENSG00000134644 PUM1 -509865 sc-eQTL 1.57e-01 0.1 0.0706 0.438 Treg L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 7.26e-01 0.0285 0.0812 0.438 Treg L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 8.25e-01 -0.0184 0.0827 0.438 Treg L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 5.45e-01 0.0501 0.0826 0.438 Treg L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 1.98e-01 -0.117 0.0909 0.441 cDC L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.80e-01 -0.015 0.0988 0.441 cDC L2
ENSG00000134644 PUM1 -509865 sc-eQTL 8.19e-01 0.0195 0.0849 0.441 cDC L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 4.71e-01 0.0429 0.0594 0.441 cDC L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 1.07e-02 0.194 0.075 0.441 cDC L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 1.80e-01 -0.1 0.0747 0.441 cDC L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.63e-02 0.143 0.0801 0.441 cDC L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 5.16e-01 0.0484 0.0744 0.438 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 9.98e-01 -0.000194 0.0831 0.438 cMono_IL1B L2
ENSG00000134644 PUM1 -509865 sc-eQTL 3.00e-03 0.165 0.0551 0.438 cMono_IL1B L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 4.31e-01 0.0389 0.0493 0.438 cMono_IL1B L2
ENSG00000162512 SDC3 -352632 sc-eQTL 5.43e-02 -0.178 0.0921 0.438 cMono_IL1B L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 1.79e-01 0.126 0.0937 0.438 cMono_IL1B L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 7.98e-01 0.0213 0.0832 0.438 cMono_IL1B L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 7.43e-01 -0.0255 0.0776 0.438 cMono_IL1B L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 9.50e-01 -0.005 0.0789 0.438 cMono_S100A L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 7.32e-01 0.032 0.0932 0.438 cMono_S100A L2
ENSG00000134644 PUM1 -509865 sc-eQTL 2.15e-01 0.0836 0.0672 0.438 cMono_S100A L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 4.08e-01 0.0429 0.0517 0.438 cMono_S100A L2
ENSG00000162512 SDC3 -352632 sc-eQTL 2.37e-01 -0.106 0.0892 0.438 cMono_S100A L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 4.77e-02 0.187 0.0939 0.438 cMono_S100A L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 5.76e-02 0.146 0.0763 0.438 cMono_S100A L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.68e-01 -0.0697 0.0771 0.438 cMono_S100A L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 1.96e-01 0.148 0.114 0.448 gdT L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 4.32e-01 0.0774 0.0981 0.448 gdT L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.63e-01 0.0745 0.101 0.448 gdT L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 6.10e-01 -0.0563 0.11 0.448 gdT L2
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 7.62e-01 0.0308 0.102 0.448 gdT L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 1.24e-01 -0.151 0.0977 0.448 gdT L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.91e-01 0.0915 0.0865 0.433 intMono L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.48e-01 -0.0179 0.0932 0.433 intMono L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.90e-01 -0.0547 0.079 0.433 intMono L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 1.82e-01 0.0827 0.0618 0.433 intMono L2
ENSG00000162512 SDC3 -352632 sc-eQTL 6.92e-02 -0.154 0.0843 0.433 intMono L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 3.44e-01 0.0843 0.0888 0.433 intMono L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 9.50e-01 -0.0053 0.0843 0.433 intMono L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 5.30e-01 -0.053 0.0842 0.433 intMono L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.02e-01 0.069 0.0821 0.443 ncMono L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 9.14e-01 0.00944 0.0877 0.443 ncMono L2
ENSG00000134644 PUM1 -509865 sc-eQTL 4.42e-01 0.0552 0.0716 0.443 ncMono L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.87e-01 0.0693 0.0649 0.443 ncMono L2
ENSG00000162512 SDC3 -352632 sc-eQTL 6.88e-03 -0.196 0.0716 0.443 ncMono L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 6.00e-01 0.0418 0.0796 0.443 ncMono L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 2.10e-01 0.0997 0.0793 0.443 ncMono L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.00e-01 -0.0856 0.0823 0.443 ncMono L2
ENSG00000060688 SNRNP40 -740662 sc-eQTL 2.30e-01 -0.113 0.0936 0.441 pDC L2
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.18e-01 -0.0238 0.103 0.441 pDC L2
ENSG00000134644 PUM1 -509865 sc-eQTL 5.01e-02 0.167 0.0845 0.441 pDC L2
ENSG00000162511 LAPTM5 -201648 sc-eQTL 5.61e-01 0.0462 0.0794 0.441 pDC L2
ENSG00000168528 SERINC2 -853439 sc-eQTL 3.02e-01 0.0995 0.0961 0.441 pDC L2
ENSG00000284543 LINC01226 -950100 sc-eQTL 8.12e-01 0.0178 0.0748 0.441 pDC L2
ENSG00000287510 AL137857.1 -175567 sc-eQTL 1.49e-01 -0.127 0.0875 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -740662 sc-eQTL 4.92e-01 0.0634 0.0921 0.438 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.18e-01 0.0177 0.0768 0.438 B_Memory LOneK1K
ENSG00000134644 PUM1 -509865 sc-eQTL 3.94e-01 0.058 0.0679 0.438 B_Memory LOneK1K
ENSG00000162510 MATN1 -167459 sc-eQTL 5.70e-01 0.0441 0.0775 0.438 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -201648 sc-eQTL 3.98e-01 -0.0412 0.0487 0.438 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 6.27e-01 0.0313 0.0644 0.438 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -175567 sc-eQTL 3.66e-01 0.0636 0.0701 0.438 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -740662 sc-eQTL 5.18e-01 0.0546 0.0845 0.438 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 2.88e-02 -0.145 0.0661 0.438 B_Naive LOneK1K
ENSG00000134644 PUM1 -509865 sc-eQTL 4.31e-01 0.0498 0.0631 0.438 B_Naive LOneK1K
ENSG00000162510 MATN1 -167459 sc-eQTL 2.17e-01 -0.0752 0.0607 0.438 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.91e-01 0.0453 0.0427 0.438 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 3.85e-01 -0.0481 0.0552 0.438 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -175567 sc-eQTL 9.77e-01 0.00186 0.0658 0.438 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -740662 sc-eQTL 9.69e-01 0.00277 0.0714 0.438 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.11e-01 0.0193 0.0808 0.438 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -509865 sc-eQTL 2.76e-03 0.153 0.0505 0.438 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.20e-01 0.0556 0.0452 0.438 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -352632 sc-eQTL 9.10e-02 -0.156 0.0918 0.438 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -853439 sc-eQTL 1.30e-01 0.144 0.0946 0.438 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -950100 sc-eQTL 4.10e-01 0.0643 0.0779 0.438 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -175567 sc-eQTL 5.70e-01 -0.0415 0.073 0.438 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -740662 sc-eQTL 8.92e-02 0.132 0.0773 0.435 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 8.12e-01 -0.0202 0.0851 0.435 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -509865 sc-eQTL 5.28e-01 0.044 0.0697 0.435 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.04e-01 0.0709 0.0556 0.435 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -352632 sc-eQTL 2.13e-02 -0.187 0.0804 0.435 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -853439 sc-eQTL 4.76e-01 0.0603 0.0844 0.435 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -950100 sc-eQTL 3.94e-01 0.0683 0.0801 0.435 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -175567 sc-eQTL 2.38e-01 -0.0948 0.08 0.435 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -740662 sc-eQTL 5.44e-01 0.0533 0.0876 0.44 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -740856 sc-eQTL 3.61e-01 0.0547 0.0598 0.44 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -509865 sc-eQTL 6.19e-01 0.0326 0.0656 0.44 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -201648 sc-eQTL 2.55e-01 -0.0834 0.0731 0.44 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -162378 sc-eQTL 9.27e-01 -0.0078 0.0846 0.44 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -175567 sc-eQTL 4.68e-01 -0.0529 0.0729 0.44 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -950155 2.67e-07 1.3e-07 5.03e-08 1.86e-07 9.79e-08 9.91e-08 1.61e-07 5.43e-08 1.45e-07 6.08e-08 1.55e-07 1.01e-07 1.52e-07 7.13e-08 6.12e-08 7.5e-08 4.01e-08 1.4e-07 6.07e-08 4.31e-08 1.22e-07 1.24e-07 1.45e-07 2.93e-08 1.5e-07 1.26e-07 1.1e-07 9.74e-08 1.2e-07 1.07e-07 9.92e-08 3.06e-08 3.89e-08 8.23e-08 6.34e-08 3.2e-08 5.37e-08 8.71e-08 6.37e-08 3.76e-08 5.14e-08 1.36e-07 5.21e-08 1.61e-08 4.7e-08 1.86e-08 1.21e-07 1.88e-09 5.01e-08