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Genes within 1Mb (chr1:30553802:A:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -742986 sc-eQTL 2.33e-01 0.0957 0.0799 0.372 B L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 1.72e-01 0.0877 0.0639 0.372 B L1
ENSG00000134644 PUM1 -512189 sc-eQTL 7.17e-01 -0.0195 0.0539 0.372 B L1
ENSG00000162510 MATN1 -169783 sc-eQTL 6.66e-01 0.0245 0.0566 0.372 B L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 2.74e-01 0.0485 0.0442 0.372 B L1
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 3.43e-01 -0.0493 0.0519 0.372 B L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.09e-01 0.0149 0.0615 0.372 B L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 5.38e-01 0.0424 0.0688 0.372 CD4T L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.72e-01 0.0481 0.0537 0.372 CD4T L1
ENSG00000134644 PUM1 -512189 sc-eQTL 3.80e-01 0.042 0.0478 0.372 CD4T L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 1.49e-01 -0.0764 0.0528 0.372 CD4T L1
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 2.09e-01 0.0597 0.0473 0.372 CD4T L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 3.88e-01 0.0492 0.0568 0.372 CD4T L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 1.38e-01 0.134 0.0899 0.372 CD8T L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 4.23e-01 0.0483 0.0601 0.372 CD8T L1
ENSG00000134644 PUM1 -512189 sc-eQTL 7.04e-01 0.0201 0.053 0.372 CD8T L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.70e-01 -0.022 0.0514 0.372 CD8T L1
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 3.49e-01 -0.0565 0.0602 0.372 CD8T L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 2.31e-01 0.0907 0.0755 0.372 CD8T L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.22e-01 -0.00808 0.0826 0.374 DC L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 8.82e-01 0.0146 0.0978 0.374 DC L1
ENSG00000134644 PUM1 -512189 sc-eQTL 1.09e-01 -0.122 0.0761 0.374 DC L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 1.69e-01 -0.0752 0.0544 0.374 DC L1
ENSG00000168528 SERINC2 -855763 sc-eQTL 2.75e-01 -0.0985 0.0899 0.374 DC L1
ENSG00000284543 LINC01226 -952424 sc-eQTL 1.01e-01 -0.0978 0.0593 0.374 DC L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 7.32e-02 -0.155 0.0858 0.374 DC L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 3.94e-01 -0.0542 0.0635 0.372 Mono L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 9.08e-01 -0.00916 0.0788 0.372 Mono L1
ENSG00000134644 PUM1 -512189 sc-eQTL 7.08e-02 -0.0911 0.0501 0.372 Mono L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 8.69e-01 -0.00765 0.0465 0.372 Mono L1
ENSG00000162512 SDC3 -354956 sc-eQTL 3.43e-02 0.188 0.0884 0.372 Mono L1
ENSG00000168528 SERINC2 -855763 sc-eQTL 7.12e-01 0.0354 0.0958 0.372 Mono L1
ENSG00000284543 LINC01226 -952424 sc-eQTL 1.53e-01 -0.121 0.084 0.372 Mono L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 7.51e-02 0.131 0.0733 0.372 Mono L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 3.67e-01 0.0789 0.0874 0.373 NK L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 6.63e-01 -0.0261 0.0599 0.373 NK L1
ENSG00000134644 PUM1 -512189 sc-eQTL 7.19e-01 0.0226 0.0628 0.373 NK L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 2.36e-02 0.163 0.0714 0.373 NK L1
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 7.44e-01 -0.0266 0.0813 0.373 NK L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 3.67e-01 0.0678 0.0749 0.373 NK L1
ENSG00000060688 SNRNP40 -742986 sc-eQTL 1.85e-01 0.0877 0.066 0.372 Other_T L1
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 4.73e-01 0.0509 0.0708 0.372 Other_T L1
ENSG00000134644 PUM1 -512189 sc-eQTL 8.61e-01 0.0112 0.0637 0.372 Other_T L1
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.03e-01 -0.0272 0.0522 0.372 Other_T L1
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 4.77e-01 -0.0608 0.0854 0.372 Other_T L1
ENSG00000287510 AL137857.1 -177891 sc-eQTL 6.90e-01 0.0356 0.0891 0.372 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -742986 sc-eQTL 1.95e-01 -0.14 0.108 0.372 B_Activated L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.90e-01 -0.0938 0.109 0.372 B_Activated L2
ENSG00000134644 PUM1 -512189 sc-eQTL 3.78e-01 0.0893 0.101 0.372 B_Activated L2
ENSG00000162510 MATN1 -169783 sc-eQTL 5.78e-01 -0.0493 0.0884 0.372 B_Activated L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.58e-01 0.0362 0.0617 0.372 B_Activated L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 3.92e-01 -0.0853 0.0995 0.372 B_Activated L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.27e-01 -0.0193 0.0882 0.372 B_Activated L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.67e-01 0.00426 0.101 0.371 B_Intermediate L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 2.47e-01 0.0977 0.0842 0.371 B_Intermediate L2
ENSG00000134644 PUM1 -512189 sc-eQTL 2.27e-01 -0.0963 0.0794 0.371 B_Intermediate L2
ENSG00000162510 MATN1 -169783 sc-eQTL 9.54e-01 0.00476 0.0829 0.371 B_Intermediate L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.25e-01 0.0324 0.0509 0.371 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 7.23e-01 0.0253 0.0714 0.371 B_Intermediate L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.73e-02 -0.136 0.0794 0.371 B_Intermediate L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.83e-01 0.0686 0.0975 0.371 B_Memory L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 1.51e-01 0.129 0.0895 0.371 B_Memory L2
ENSG00000134644 PUM1 -512189 sc-eQTL 6.44e-01 0.0362 0.0782 0.371 B_Memory L2
ENSG00000162510 MATN1 -169783 sc-eQTL 1.16e-01 -0.117 0.0744 0.371 B_Memory L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 3.72e-01 0.0593 0.0662 0.371 B_Memory L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 3.89e-02 -0.156 0.0752 0.371 B_Memory L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.40e-01 0.018 0.0889 0.371 B_Memory L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 8.85e-01 0.0127 0.0877 0.372 B_Naive1 L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 2.32e-01 0.0904 0.0755 0.372 B_Naive1 L2
ENSG00000134644 PUM1 -512189 sc-eQTL 8.31e-01 0.0143 0.0668 0.372 B_Naive1 L2
ENSG00000162510 MATN1 -169783 sc-eQTL 8.46e-01 0.0132 0.0678 0.372 B_Naive1 L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 9.91e-01 -0.000489 0.0453 0.372 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 6.03e-01 -0.0309 0.0594 0.372 B_Naive1 L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 1.41e-01 0.108 0.0731 0.372 B_Naive1 L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 7.95e-01 -0.0245 0.0945 0.373 B_Naive2 L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 6.00e-01 0.041 0.078 0.373 B_Naive2 L2
ENSG00000134644 PUM1 -512189 sc-eQTL 2.62e-01 -0.0856 0.0761 0.373 B_Naive2 L2
ENSG00000162510 MATN1 -169783 sc-eQTL 8.48e-01 0.0141 0.0733 0.373 B_Naive2 L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.21e-01 -0.0247 0.0498 0.373 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 9.66e-01 -0.00309 0.0725 0.373 B_Naive2 L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 4.82e-01 0.0552 0.0782 0.373 B_Naive2 L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.29e-01 -0.0747 0.0942 0.37 CD4_CTL L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 9.75e-01 0.00294 0.0928 0.37 CD4_CTL L2
ENSG00000134644 PUM1 -512189 sc-eQTL 5.43e-01 -0.0555 0.0909 0.37 CD4_CTL L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.69e-01 0.0347 0.0811 0.37 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 5.25e-01 -0.0565 0.0887 0.37 CD4_CTL L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 9.12e-01 0.00864 0.0783 0.37 CD4_CTL L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.48e-01 0.0547 0.0719 0.372 CD4_Naive L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 1.27e-01 0.0973 0.0634 0.372 CD4_Naive L2
ENSG00000134644 PUM1 -512189 sc-eQTL 1.63e-01 0.0711 0.0507 0.372 CD4_Naive L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 3.76e-01 -0.0483 0.0545 0.372 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 1.13e-01 0.0876 0.0551 0.372 CD4_Naive L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 6.35e-01 0.0302 0.0636 0.372 CD4_Naive L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 5.79e-01 0.0503 0.0904 0.372 CD4_TCM L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.44e-01 0.0239 0.0729 0.372 CD4_TCM L2
ENSG00000134644 PUM1 -512189 sc-eQTL 6.37e-01 0.0305 0.0645 0.372 CD4_TCM L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 3.34e-01 -0.0518 0.0534 0.372 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 7.61e-01 -0.0207 0.068 0.372 CD4_TCM L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 2.91e-01 0.0799 0.0755 0.372 CD4_TCM L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.28e-01 0.0725 0.0913 0.372 CD4_TEM L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.51e-02 -0.155 0.0865 0.372 CD4_TEM L2
ENSG00000134644 PUM1 -512189 sc-eQTL 1.55e-01 -0.103 0.0722 0.372 CD4_TEM L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.69e-01 0.0418 0.0734 0.372 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 2.32e-02 0.194 0.0848 0.372 CD4_TEM L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 5.58e-01 -0.0496 0.0846 0.372 CD4_TEM L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 1.57e-01 0.139 0.0979 0.372 CD8_CTL L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.56e-01 0.0234 0.0754 0.372 CD8_CTL L2
ENSG00000134644 PUM1 -512189 sc-eQTL 8.60e-01 -0.013 0.0732 0.372 CD8_CTL L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 8.80e-01 0.0122 0.0811 0.372 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 3.44e-01 0.0807 0.0851 0.372 CD8_CTL L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 2.23e-01 0.0977 0.0799 0.372 CD8_CTL L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 5.73e-01 0.051 0.0903 0.372 CD8_Naive L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 5.01e-01 0.0525 0.0779 0.372 CD8_Naive L2
ENSG00000134644 PUM1 -512189 sc-eQTL 6.25e-01 -0.0307 0.0627 0.372 CD8_Naive L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 1.32e-01 -0.0903 0.0598 0.372 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 5.63e-01 -0.0434 0.075 0.372 CD8_Naive L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 2.54e-01 0.0931 0.0814 0.372 CD8_Naive L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.15e-01 0.0831 0.102 0.377 CD8_TCM L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.23e-01 -0.0331 0.0933 0.377 CD8_TCM L2
ENSG00000134644 PUM1 -512189 sc-eQTL 2.38e-02 0.197 0.0866 0.377 CD8_TCM L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 3.22e-01 0.0909 0.0916 0.377 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 4.19e-01 0.0687 0.0849 0.377 CD8_TCM L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 5.96e-01 -0.0456 0.0859 0.377 CD8_TCM L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 7.74e-01 -0.0271 0.0943 0.361 CD8_TEM L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 1.77e-02 0.213 0.0891 0.361 CD8_TEM L2
ENSG00000134644 PUM1 -512189 sc-eQTL 3.73e-01 0.0824 0.0922 0.361 CD8_TEM L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.95e-01 0.0341 0.0868 0.361 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 6.41e-01 -0.0421 0.0901 0.361 CD8_TEM L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 2.75e-01 0.089 0.0814 0.361 CD8_TEM L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 3.37e-01 0.0922 0.0959 0.37 MAIT L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 2.52e-01 0.0974 0.0849 0.37 MAIT L2
ENSG00000134644 PUM1 -512189 sc-eQTL 9.14e-01 0.00882 0.0816 0.37 MAIT L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.87e-01 -0.0418 0.0769 0.37 MAIT L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 9.26e-02 -0.144 0.0852 0.37 MAIT L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 5.31e-01 0.0555 0.0883 0.37 MAIT L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.76e-01 0.00297 0.0996 0.373 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 2.83e-01 -0.0903 0.0839 0.373 NK_CD56bright L2
ENSG00000134644 PUM1 -512189 sc-eQTL 6.23e-01 -0.0435 0.0883 0.373 NK_CD56bright L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 4.65e-02 0.173 0.0863 0.373 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 8.03e-01 0.0219 0.0876 0.373 NK_CD56bright L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 7.09e-01 0.0322 0.0863 0.373 NK_CD56bright L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 8.53e-02 0.158 0.0916 0.373 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.76e-01 -0.0605 0.0681 0.373 NK_CD56dim L2
ENSG00000134644 PUM1 -512189 sc-eQTL 2.46e-01 0.0812 0.0698 0.373 NK_CD56dim L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 4.42e-02 0.15 0.0739 0.373 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 1.86e-01 -0.124 0.0931 0.373 NK_CD56dim L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 9.77e-01 0.00218 0.0772 0.373 NK_CD56dim L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.07e-01 -0.0822 0.099 0.372 NK_HLA L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 4.46e-02 0.177 0.0876 0.372 NK_HLA L2
ENSG00000134644 PUM1 -512189 sc-eQTL 9.18e-01 0.00892 0.0863 0.372 NK_HLA L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 9.56e-02 0.137 0.0818 0.372 NK_HLA L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 4.19e-01 -0.0709 0.0875 0.372 NK_HLA L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 9.84e-02 0.14 0.0841 0.372 NK_HLA L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 8.24e-01 -0.0201 0.0902 0.373 NK_cytokine L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.84e-01 -0.0613 0.0703 0.373 NK_cytokine L2
ENSG00000134644 PUM1 -512189 sc-eQTL 9.22e-01 0.00751 0.0762 0.373 NK_cytokine L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 8.97e-03 0.218 0.0825 0.373 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 1.35e-01 0.133 0.0884 0.373 NK_cytokine L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 1.43e-01 0.121 0.0823 0.373 NK_cytokine L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 2.12e-01 0.134 0.107 0.348 PB L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 1.33e-01 0.187 0.124 0.348 PB L2
ENSG00000134644 PUM1 -512189 sc-eQTL 7.86e-01 -0.0295 0.108 0.348 PB L2
ENSG00000162510 MATN1 -169783 sc-eQTL 4.00e-01 -0.0852 0.101 0.348 PB L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 2.26e-01 -0.0874 0.0718 0.348 PB L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 6.64e-01 -0.0431 0.0988 0.348 PB L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 4.53e-01 -0.0791 0.105 0.348 PB L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 1.03e-01 0.115 0.0705 0.374 Pro_T L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 9.28e-01 0.00817 0.0901 0.374 Pro_T L2
ENSG00000134644 PUM1 -512189 sc-eQTL 1.79e-01 0.113 0.0837 0.374 Pro_T L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 9.13e-01 0.00661 0.0603 0.374 Pro_T L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 8.07e-01 0.0206 0.0842 0.374 Pro_T L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.43e-01 0.0154 0.0775 0.374 Pro_T L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 7.84e-01 0.0261 0.0951 0.372 Treg L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 8.36e-01 0.0191 0.092 0.372 Treg L2
ENSG00000134644 PUM1 -512189 sc-eQTL 7.40e-01 -0.0245 0.0737 0.372 Treg L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 4.57e-01 -0.0628 0.0842 0.372 Treg L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 9.30e-01 0.00756 0.0859 0.372 Treg L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 7.43e-01 -0.0281 0.0858 0.372 Treg L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.11e-01 -0.0108 0.0962 0.378 cDC L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 9.81e-01 -0.00246 0.104 0.378 cDC L2
ENSG00000134644 PUM1 -512189 sc-eQTL 7.05e-01 0.0339 0.0894 0.378 cDC L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 8.21e-01 -0.0142 0.0627 0.378 cDC L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 1.06e-01 -0.13 0.0799 0.378 cDC L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 3.60e-01 0.0725 0.0789 0.378 cDC L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 1.93e-02 -0.198 0.0839 0.378 cDC L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 7.94e-01 -0.0198 0.076 0.372 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 5.93e-01 -0.0454 0.0847 0.372 cMono_IL1B L2
ENSG00000134644 PUM1 -512189 sc-eQTL 6.70e-02 -0.105 0.0569 0.372 cMono_IL1B L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 8.00e-01 0.0127 0.0503 0.372 cMono_IL1B L2
ENSG00000162512 SDC3 -354956 sc-eQTL 1.05e-01 0.154 0.0943 0.372 cMono_IL1B L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 6.38e-01 0.0453 0.096 0.372 cMono_IL1B L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 8.45e-01 -0.0166 0.0849 0.372 cMono_IL1B L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 1.80e-01 0.106 0.0788 0.372 cMono_IL1B L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.77e-01 0.00227 0.0798 0.372 cMono_S100A L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 6.97e-01 0.0367 0.0942 0.372 cMono_S100A L2
ENSG00000134644 PUM1 -512189 sc-eQTL 7.54e-01 -0.0214 0.0681 0.372 cMono_S100A L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 6.91e-01 -0.0209 0.0523 0.372 cMono_S100A L2
ENSG00000162512 SDC3 -354956 sc-eQTL 8.05e-01 -0.0224 0.0904 0.372 cMono_S100A L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 9.62e-01 0.00456 0.0958 0.372 cMono_S100A L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 1.52e-02 -0.188 0.0767 0.372 cMono_S100A L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 1.41e-01 0.115 0.0777 0.372 cMono_S100A L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 2.80e-01 -0.129 0.119 0.355 gdT L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.48e-01 0.0965 0.102 0.355 gdT L2
ENSG00000134644 PUM1 -512189 sc-eQTL 9.76e-01 0.00314 0.106 0.355 gdT L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 9.79e-01 0.00307 0.115 0.355 gdT L2
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 4.20e-01 -0.0858 0.106 0.355 gdT L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 4.64e-01 0.0754 0.103 0.355 gdT L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 2.37e-01 -0.105 0.0883 0.376 intMono L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 4.93e-01 0.0653 0.0951 0.376 intMono L2
ENSG00000134644 PUM1 -512189 sc-eQTL 3.95e-02 0.166 0.08 0.376 intMono L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.94e-01 -0.0338 0.0634 0.376 intMono L2
ENSG00000162512 SDC3 -354956 sc-eQTL 6.34e-02 0.161 0.0861 0.376 intMono L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 8.78e-01 -0.0139 0.0909 0.376 intMono L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 6.74e-01 -0.0362 0.0861 0.376 intMono L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.24e-01 -0.0192 0.0861 0.376 intMono L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 8.35e-02 -0.145 0.0836 0.369 ncMono L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.40e-01 -0.0299 0.0898 0.369 ncMono L2
ENSG00000134644 PUM1 -512189 sc-eQTL 8.98e-01 0.00944 0.0734 0.369 ncMono L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 1.41e-01 -0.0979 0.0663 0.369 ncMono L2
ENSG00000162512 SDC3 -354956 sc-eQTL 4.64e-02 0.148 0.074 0.369 ncMono L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 7.40e-01 -0.0271 0.0816 0.369 ncMono L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 4.88e-02 -0.16 0.0807 0.369 ncMono L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 3.90e-01 0.0727 0.0843 0.369 ncMono L2
ENSG00000060688 SNRNP40 -742986 sc-eQTL 9.06e-01 -0.0114 0.0965 0.376 pDC L2
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 2.61e-01 -0.119 0.105 0.376 pDC L2
ENSG00000134644 PUM1 -512189 sc-eQTL 8.46e-03 -0.229 0.0859 0.376 pDC L2
ENSG00000162511 LAPTM5 -203972 sc-eQTL 4.11e-01 -0.0672 0.0815 0.376 pDC L2
ENSG00000168528 SERINC2 -855763 sc-eQTL 2.49e-01 -0.114 0.0986 0.376 pDC L2
ENSG00000284543 LINC01226 -952424 sc-eQTL 1.68e-01 -0.106 0.0764 0.376 pDC L2
ENSG00000287510 AL137857.1 -177891 sc-eQTL 4.90e-02 0.177 0.0893 0.376 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -742986 sc-eQTL 6.29e-01 -0.0458 0.0945 0.372 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.59e-01 0.0722 0.0786 0.372 B_Memory LOneK1K
ENSG00000134644 PUM1 -512189 sc-eQTL 4.10e-01 -0.0575 0.0697 0.372 B_Memory LOneK1K
ENSG00000162510 MATN1 -169783 sc-eQTL 7.94e-01 -0.0208 0.0795 0.372 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -203972 sc-eQTL 2.70e-01 0.0551 0.0498 0.372 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 4.38e-01 -0.0513 0.066 0.372 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -177891 sc-eQTL 3.49e-01 -0.0674 0.0719 0.372 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -742986 sc-eQTL 7.63e-01 -0.0262 0.0869 0.372 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 3.03e-01 0.0708 0.0686 0.372 B_Naive LOneK1K
ENSG00000134644 PUM1 -512189 sc-eQTL 3.06e-01 -0.0666 0.0649 0.372 B_Naive LOneK1K
ENSG00000162510 MATN1 -169783 sc-eQTL 4.28e-01 0.0496 0.0625 0.372 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -203972 sc-eQTL 5.31e-01 -0.0276 0.044 0.372 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 9.04e-01 0.00684 0.0569 0.372 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -177891 sc-eQTL 4.34e-01 0.0529 0.0675 0.372 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -742986 sc-eQTL 8.10e-01 -0.0174 0.0723 0.372 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 8.77e-01 -0.0127 0.0819 0.372 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -512189 sc-eQTL 4.76e-02 -0.103 0.0518 0.372 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -203972 sc-eQTL 9.81e-01 -0.00108 0.0459 0.372 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -354956 sc-eQTL 2.57e-01 0.106 0.0934 0.372 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -855763 sc-eQTL 7.84e-01 0.0265 0.0964 0.372 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -952424 sc-eQTL 2.87e-01 -0.0842 0.0788 0.372 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -177891 sc-eQTL 5.77e-02 0.14 0.0734 0.372 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -742986 sc-eQTL 4.18e-02 -0.162 0.0793 0.375 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 7.91e-01 0.0233 0.0876 0.375 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -512189 sc-eQTL 8.56e-01 0.013 0.0718 0.375 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -203972 sc-eQTL 1.97e-01 -0.0741 0.0572 0.375 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -354956 sc-eQTL 2.23e-02 0.191 0.0828 0.375 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -855763 sc-eQTL 8.16e-01 -0.0203 0.087 0.375 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -952424 sc-eQTL 2.45e-01 -0.0959 0.0823 0.375 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -177891 sc-eQTL 8.11e-01 0.0198 0.0827 0.375 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -742986 sc-eQTL 2.71e-01 0.0967 0.0876 0.373 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -743180 sc-eQTL 4.26e-01 -0.0478 0.06 0.373 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -512189 sc-eQTL 5.77e-01 0.0367 0.0657 0.373 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -203972 sc-eQTL 2.60e-02 0.163 0.0726 0.373 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -164702 sc-eQTL 6.44e-01 -0.0392 0.0848 0.373 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -177891 sc-eQTL 3.51e-01 0.0683 0.073 0.373 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -709879 eQTL 0.0336 -0.0739 0.0347 0.00107 0.0 0.381

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000060688 \N -742986 2.91e-07 1.36e-07 6.15e-08 2.01e-07 1.03e-07 8.33e-08 1.81e-07 5.75e-08 1.5e-07 6.75e-08 1.63e-07 1.19e-07 1.79e-07 7.64e-08 5.94e-08 7.97e-08 4.45e-08 1.56e-07 7.18e-08 5.2e-08 1.22e-07 1.31e-07 1.58e-07 2.68e-08 1.68e-07 1.23e-07 1.17e-07 1.06e-07 1.26e-07 1.07e-07 1.08e-07 4.4e-08 3.46e-08 8.89e-08 3.07e-08 3.07e-08 5.42e-08 7.63e-08 6.41e-08 4.08e-08 5.81e-08 1.46e-07 4.17e-08 7.35e-09 3.29e-08 1.19e-08 8.67e-08 2.16e-09 4.94e-08