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Genes within 1Mb (chr1:30552453:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -744335 sc-eQTL 2.45e-01 0.0924 0.0793 0.374 B L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 1.79e-01 0.0856 0.0635 0.374 B L1
ENSG00000134644 PUM1 -513538 sc-eQTL 7.73e-01 -0.0154 0.0535 0.374 B L1
ENSG00000162510 MATN1 -171132 sc-eQTL 6.67e-01 0.0242 0.0562 0.374 B L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.88e-01 0.0467 0.0439 0.374 B L1
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 3.00e-01 -0.0534 0.0515 0.374 B L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.30e-01 0.0211 0.061 0.374 B L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 4.97e-01 0.0465 0.0683 0.374 CD4T L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 3.99e-01 0.0451 0.0533 0.374 CD4T L1
ENSG00000134644 PUM1 -513538 sc-eQTL 3.09e-01 0.0484 0.0474 0.374 CD4T L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.23e-01 -0.0812 0.0524 0.374 CD4T L1
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 2.00e-01 0.0604 0.047 0.374 CD4T L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 3.17e-01 0.0565 0.0563 0.374 CD4T L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 1.13e-01 0.142 0.0892 0.374 CD8T L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.24e-01 0.0478 0.0596 0.374 CD8T L1
ENSG00000134644 PUM1 -513538 sc-eQTL 6.87e-01 0.0212 0.0526 0.374 CD8T L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 7.09e-01 -0.0191 0.0511 0.374 CD8T L1
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 3.29e-01 -0.0585 0.0597 0.374 CD8T L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.10e-01 0.0941 0.0749 0.374 CD8T L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.90e-01 -0.0114 0.0819 0.376 DC L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 8.45e-01 0.019 0.097 0.376 DC L1
ENSG00000134644 PUM1 -513538 sc-eQTL 1.18e-01 -0.118 0.0755 0.376 DC L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.94e-01 -0.0704 0.054 0.376 DC L1
ENSG00000168528 SERINC2 -857112 sc-eQTL 2.57e-01 -0.101 0.0892 0.376 DC L1
ENSG00000284543 LINC01226 -953773 sc-eQTL 1.04e-01 -0.0963 0.0589 0.376 DC L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 6.92e-02 -0.155 0.0851 0.376 DC L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 4.35e-01 -0.0493 0.0631 0.374 Mono L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 9.78e-01 0.00218 0.0783 0.374 Mono L1
ENSG00000134644 PUM1 -513538 sc-eQTL 6.42e-02 -0.0926 0.0498 0.374 Mono L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 8.43e-01 -0.00917 0.0462 0.374 Mono L1
ENSG00000162512 SDC3 -356305 sc-eQTL 5.36e-02 0.171 0.0879 0.374 Mono L1
ENSG00000168528 SERINC2 -857112 sc-eQTL 7.02e-01 0.0364 0.0952 0.374 Mono L1
ENSG00000284543 LINC01226 -953773 sc-eQTL 2.05e-01 -0.106 0.0835 0.374 Mono L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.13e-01 0.116 0.0729 0.374 Mono L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.48e-01 0.0814 0.0866 0.376 NK L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 6.96e-01 -0.0232 0.0594 0.376 NK L1
ENSG00000134644 PUM1 -513538 sc-eQTL 7.45e-01 0.0203 0.0623 0.376 NK L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.53e-02 0.173 0.0707 0.376 NK L1
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 7.60e-01 -0.0247 0.0806 0.376 NK L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 3.49e-01 0.0698 0.0743 0.376 NK L1
ENSG00000060688 SNRNP40 -744335 sc-eQTL 1.70e-01 0.0902 0.0655 0.374 Other_T L1
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.85e-01 0.0492 0.0703 0.374 Other_T L1
ENSG00000134644 PUM1 -513538 sc-eQTL 8.32e-01 0.0135 0.0632 0.374 Other_T L1
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.41e-01 -0.0242 0.0518 0.374 Other_T L1
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.98e-01 -0.0448 0.0848 0.374 Other_T L1
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.15e-01 0.0324 0.0884 0.374 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -744335 sc-eQTL 1.92e-01 -0.14 0.107 0.375 B_Activated L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.02e-01 -0.0907 0.108 0.375 B_Activated L2
ENSG00000134644 PUM1 -513538 sc-eQTL 3.41e-01 0.0957 0.1 0.375 B_Activated L2
ENSG00000162510 MATN1 -171132 sc-eQTL 5.39e-01 -0.054 0.0877 0.375 B_Activated L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 5.65e-01 0.0353 0.0612 0.375 B_Activated L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 3.24e-01 -0.0975 0.0986 0.375 B_Activated L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 8.53e-01 -0.0162 0.0875 0.375 B_Activated L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.49e-01 -0.00645 0.101 0.373 B_Intermediate L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 3.50e-01 0.0784 0.0836 0.373 B_Intermediate L2
ENSG00000134644 PUM1 -513538 sc-eQTL 3.16e-01 -0.0792 0.0789 0.373 B_Intermediate L2
ENSG00000162510 MATN1 -171132 sc-eQTL 9.71e-01 -0.00298 0.0823 0.373 B_Intermediate L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 5.43e-01 0.0307 0.0505 0.373 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 6.14e-01 0.0358 0.0708 0.373 B_Intermediate L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.05e-01 -0.128 0.0788 0.373 B_Intermediate L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 5.80e-01 0.0536 0.0967 0.373 B_Memory L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 1.35e-01 0.133 0.0887 0.373 B_Memory L2
ENSG00000134644 PUM1 -513538 sc-eQTL 6.78e-01 0.0322 0.0776 0.373 B_Memory L2
ENSG00000162510 MATN1 -171132 sc-eQTL 1.08e-01 -0.119 0.0738 0.373 B_Memory L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 4.32e-01 0.0518 0.0657 0.373 B_Memory L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 2.63e-02 -0.167 0.0744 0.373 B_Memory L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.87e-01 0.0238 0.0882 0.373 B_Memory L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.02e-01 0.0219 0.0871 0.374 B_Naive1 L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.55e-01 0.0857 0.075 0.374 B_Naive1 L2
ENSG00000134644 PUM1 -513538 sc-eQTL 8.53e-01 0.0123 0.0663 0.374 B_Naive1 L2
ENSG00000162510 MATN1 -171132 sc-eQTL 7.73e-01 0.0195 0.0673 0.374 B_Naive1 L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 9.43e-01 -0.00321 0.045 0.374 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.71e-01 -0.0335 0.059 0.374 B_Naive1 L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.13e-01 0.115 0.0725 0.374 B_Naive1 L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.43e-01 -0.0186 0.0938 0.376 B_Naive2 L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.54e-01 0.058 0.0773 0.376 B_Naive2 L2
ENSG00000134644 PUM1 -513538 sc-eQTL 2.45e-01 -0.088 0.0755 0.376 B_Naive2 L2
ENSG00000162510 MATN1 -171132 sc-eQTL 9.17e-01 0.0076 0.0727 0.376 B_Naive2 L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 5.75e-01 -0.0277 0.0494 0.376 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 9.01e-01 -0.00895 0.0719 0.376 B_Naive2 L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 6.34e-01 0.037 0.0777 0.376 B_Naive2 L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.98e-01 -0.0791 0.0934 0.373 CD4_CTL L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 9.99e-01 0.000149 0.092 0.373 CD4_CTL L2
ENSG00000134644 PUM1 -513538 sc-eQTL 5.88e-01 -0.0489 0.0902 0.373 CD4_CTL L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.01e-01 0.0421 0.0804 0.373 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.18e-01 -0.0569 0.0879 0.373 CD4_CTL L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.94e-01 0.0203 0.0776 0.373 CD4_CTL L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 4.20e-01 0.0577 0.0714 0.374 CD4_Naive L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 1.43e-01 0.0927 0.0631 0.374 CD4_Naive L2
ENSG00000134644 PUM1 -513538 sc-eQTL 1.21e-01 0.0783 0.0503 0.374 CD4_Naive L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 3.39e-01 -0.0519 0.0541 0.374 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 1.03e-01 0.0897 0.0547 0.374 CD4_Naive L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 5.72e-01 0.0357 0.0632 0.374 CD4_Naive L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 5.05e-01 0.0598 0.0897 0.374 CD4_TCM L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 7.30e-01 0.025 0.0724 0.374 CD4_TCM L2
ENSG00000134644 PUM1 -513538 sc-eQTL 5.26e-01 0.0406 0.064 0.374 CD4_TCM L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.88e-01 -0.0565 0.053 0.374 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 6.47e-01 -0.0309 0.0674 0.374 CD4_TCM L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.59e-01 0.0848 0.0749 0.374 CD4_TCM L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.99e-01 0.0765 0.0906 0.374 CD4_TEM L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 6.82e-02 -0.157 0.0858 0.374 CD4_TEM L2
ENSG00000134644 PUM1 -513538 sc-eQTL 1.29e-01 -0.109 0.0716 0.374 CD4_TEM L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.67e-01 0.0314 0.0728 0.374 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 2.10e-02 0.196 0.0842 0.374 CD4_TEM L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.73e-01 -0.0602 0.0839 0.374 CD4_TEM L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 1.46e-01 0.142 0.0971 0.374 CD8_CTL L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 7.78e-01 0.0211 0.0748 0.374 CD8_CTL L2
ENSG00000134644 PUM1 -513538 sc-eQTL 8.67e-01 -0.0122 0.0727 0.374 CD8_CTL L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 7.67e-01 0.0239 0.0805 0.374 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 3.98e-01 0.0715 0.0844 0.374 CD8_CTL L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.04e-01 0.101 0.0793 0.374 CD8_CTL L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 4.98e-01 0.0608 0.0896 0.374 CD8_Naive L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.94e-01 0.053 0.0773 0.374 CD8_Naive L2
ENSG00000134644 PUM1 -513538 sc-eQTL 6.66e-01 -0.0269 0.0622 0.374 CD8_Naive L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.38e-01 -0.0885 0.0594 0.374 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.63e-01 -0.0431 0.0744 0.374 CD8_Naive L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.36e-01 0.096 0.0808 0.374 CD8_Naive L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.39e-01 0.0966 0.101 0.38 CD8_TCM L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 6.77e-01 -0.0386 0.0926 0.38 CD8_TCM L2
ENSG00000134644 PUM1 -513538 sc-eQTL 2.81e-02 0.19 0.086 0.38 CD8_TCM L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 3.48e-01 0.0855 0.0909 0.38 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 4.24e-01 0.0675 0.0842 0.38 CD8_TCM L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 6.11e-01 -0.0434 0.0852 0.38 CD8_TCM L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 7.70e-01 -0.0274 0.0936 0.363 CD8_TEM L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.20e-02 0.204 0.0885 0.363 CD8_TEM L2
ENSG00000134644 PUM1 -513538 sc-eQTL 3.75e-01 0.0814 0.0916 0.363 CD8_TEM L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.13e-01 0.0436 0.0862 0.363 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.32e-01 -0.056 0.0894 0.363 CD8_TEM L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.36e-01 0.096 0.0807 0.363 CD8_TEM L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.74e-01 0.0848 0.0952 0.372 MAIT L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.91e-01 0.0891 0.0842 0.372 MAIT L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.16e-01 0.00854 0.081 0.372 MAIT L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.30e-01 -0.0368 0.0763 0.372 MAIT L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 1.32e-01 -0.128 0.0846 0.372 MAIT L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 6.26e-01 0.0428 0.0876 0.372 MAIT L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.17e-01 0.0104 0.099 0.376 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.86e-01 -0.0893 0.0835 0.376 NK_CD56bright L2
ENSG00000134644 PUM1 -513538 sc-eQTL 7.24e-01 -0.0311 0.0879 0.376 NK_CD56bright L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 4.23e-02 0.175 0.0858 0.376 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 8.87e-01 0.0124 0.0871 0.376 NK_CD56bright L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.19e-01 0.031 0.0858 0.376 NK_CD56bright L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.26e-02 0.154 0.0909 0.375 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.25e-01 -0.054 0.0676 0.375 NK_CD56dim L2
ENSG00000134644 PUM1 -513538 sc-eQTL 2.78e-01 0.0752 0.0692 0.375 NK_CD56dim L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.79e-02 0.162 0.0732 0.375 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 1.90e-01 -0.121 0.0924 0.375 NK_CD56dim L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 9.48e-01 0.005 0.0765 0.375 NK_CD56dim L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 4.42e-01 -0.0757 0.0982 0.374 NK_HLA L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.88e-02 0.172 0.0869 0.374 NK_HLA L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.37e-01 -0.00678 0.0855 0.374 NK_HLA L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 8.48e-02 0.14 0.081 0.374 NK_HLA L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 5.01e-01 -0.0585 0.0868 0.374 NK_HLA L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.01e-01 0.137 0.0834 0.374 NK_HLA L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.50e-01 -0.017 0.0894 0.375 NK_cytokine L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 3.97e-01 -0.0591 0.0697 0.375 NK_cytokine L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.49e-01 0.00482 0.0755 0.375 NK_cytokine L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.68e-03 0.224 0.0816 0.375 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 1.27e-01 0.134 0.0876 0.375 NK_cytokine L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.35e-01 0.122 0.0815 0.375 NK_cytokine L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 2.30e-01 0.128 0.106 0.352 PB L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.08e-01 0.155 0.123 0.352 PB L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.10e-01 -0.0121 0.107 0.352 PB L2
ENSG00000162510 MATN1 -171132 sc-eQTL 6.06e-01 -0.0517 0.0999 0.352 PB L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.98e-01 -0.0744 0.0711 0.352 PB L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 8.26e-01 -0.0216 0.0978 0.352 PB L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.58e-01 -0.0773 0.104 0.352 PB L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.21e-02 0.118 0.07 0.376 Pro_T L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 9.68e-01 0.00354 0.0894 0.376 Pro_T L2
ENSG00000134644 PUM1 -513538 sc-eQTL 1.88e-01 0.11 0.0831 0.376 Pro_T L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 8.36e-01 0.0124 0.0598 0.376 Pro_T L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 7.96e-01 0.0216 0.0836 0.376 Pro_T L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 8.32e-01 0.0163 0.0769 0.376 Pro_T L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 7.91e-01 0.025 0.0944 0.374 Treg L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 8.44e-01 0.018 0.0914 0.374 Treg L2
ENSG00000134644 PUM1 -513538 sc-eQTL 6.85e-01 -0.0296 0.0731 0.374 Treg L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 4.54e-01 -0.0628 0.0836 0.374 Treg L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 8.71e-01 0.0138 0.0853 0.374 Treg L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.86e-01 -0.0232 0.0852 0.374 Treg L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.29e-01 -0.00851 0.0953 0.38 cDC L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 9.65e-01 0.00457 0.103 0.38 cDC L2
ENSG00000134644 PUM1 -513538 sc-eQTL 6.96e-01 0.0347 0.0886 0.38 cDC L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 8.38e-01 -0.0127 0.0621 0.38 cDC L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 8.48e-02 -0.137 0.0791 0.38 cDC L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 3.97e-01 0.0665 0.0782 0.38 cDC L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.99e-02 -0.195 0.0831 0.38 cDC L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 7.79e-01 -0.0211 0.0754 0.374 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 6.90e-01 -0.0336 0.0841 0.374 cMono_IL1B L2
ENSG00000134644 PUM1 -513538 sc-eQTL 6.08e-02 -0.106 0.0565 0.374 cMono_IL1B L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 7.96e-01 0.0129 0.05 0.374 cMono_IL1B L2
ENSG00000162512 SDC3 -356305 sc-eQTL 1.60e-01 0.132 0.0937 0.374 cMono_IL1B L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 6.28e-01 0.0462 0.0953 0.374 cMono_IL1B L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 9.61e-01 -0.00412 0.0843 0.374 cMono_IL1B L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 1.89e-01 0.103 0.0783 0.374 cMono_IL1B L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 9.58e-01 0.00416 0.0792 0.374 cMono_S100A L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 6.19e-01 0.0466 0.0936 0.374 cMono_S100A L2
ENSG00000134644 PUM1 -513538 sc-eQTL 7.69e-01 -0.0199 0.0676 0.374 cMono_S100A L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 6.20e-01 -0.0258 0.052 0.374 cMono_S100A L2
ENSG00000162512 SDC3 -356305 sc-eQTL 7.03e-01 -0.0343 0.0898 0.374 cMono_S100A L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 9.74e-01 -0.00315 0.0951 0.374 cMono_S100A L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 1.97e-02 -0.179 0.0763 0.374 cMono_S100A L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 2.10e-01 0.0972 0.0773 0.374 cMono_S100A L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 3.23e-01 -0.117 0.118 0.358 gdT L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 3.38e-01 0.0974 0.101 0.358 gdT L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.00e-01 0.0132 0.105 0.358 gdT L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 9.25e-01 0.0107 0.114 0.358 gdT L2
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 4.22e-01 -0.0844 0.105 0.358 gdT L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.51e-01 0.0768 0.102 0.358 gdT L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 2.42e-01 -0.103 0.0875 0.378 intMono L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.53e-01 0.0709 0.0942 0.378 intMono L2
ENSG00000134644 PUM1 -513538 sc-eQTL 4.47e-02 0.16 0.0793 0.378 intMono L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 5.65e-01 -0.0362 0.0628 0.378 intMono L2
ENSG00000162512 SDC3 -356305 sc-eQTL 6.96e-02 0.156 0.0853 0.378 intMono L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 9.78e-01 -0.00246 0.09 0.378 intMono L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 6.24e-01 -0.0419 0.0853 0.378 intMono L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.17e-01 -0.0309 0.0853 0.378 intMono L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 1.30e-01 -0.127 0.0832 0.371 ncMono L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 7.04e-01 -0.0339 0.0892 0.371 ncMono L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.90e-01 0.000952 0.0729 0.371 ncMono L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.58e-01 -0.0934 0.0659 0.371 ncMono L2
ENSG00000162512 SDC3 -356305 sc-eQTL 5.29e-02 0.143 0.0735 0.371 ncMono L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 7.79e-01 -0.0227 0.081 0.371 ncMono L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 5.29e-02 -0.156 0.0802 0.371 ncMono L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.69e-01 0.0609 0.0838 0.371 ncMono L2
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.48e-01 -0.0184 0.0955 0.379 pDC L2
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.98e-01 -0.109 0.104 0.379 pDC L2
ENSG00000134644 PUM1 -513538 sc-eQTL 9.58e-03 -0.223 0.0851 0.379 pDC L2
ENSG00000162511 LAPTM5 -205321 sc-eQTL 4.69e-01 -0.0586 0.0807 0.379 pDC L2
ENSG00000168528 SERINC2 -857112 sc-eQTL 2.43e-01 -0.114 0.0976 0.379 pDC L2
ENSG00000284543 LINC01226 -953773 sc-eQTL 1.66e-01 -0.105 0.0756 0.379 pDC L2
ENSG00000287510 AL137857.1 -179240 sc-eQTL 5.07e-02 0.174 0.0884 0.379 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -744335 sc-eQTL 5.29e-01 -0.0591 0.0938 0.374 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 3.71e-01 0.07 0.078 0.374 B_Memory LOneK1K
ENSG00000134644 PUM1 -513538 sc-eQTL 4.67e-01 -0.0505 0.0692 0.374 B_Memory LOneK1K
ENSG00000162510 MATN1 -171132 sc-eQTL 6.91e-01 -0.0314 0.0789 0.374 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.79e-01 0.0537 0.0495 0.374 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 4.05e-01 -0.0547 0.0655 0.374 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.16e-01 -0.0582 0.0714 0.374 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.47e-01 -0.0167 0.0863 0.374 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 2.62e-01 0.0765 0.068 0.374 B_Naive LOneK1K
ENSG00000134644 PUM1 -513538 sc-eQTL 2.97e-01 -0.0673 0.0644 0.374 B_Naive LOneK1K
ENSG00000162510 MATN1 -171132 sc-eQTL 3.89e-01 0.0536 0.062 0.374 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -205321 sc-eQTL 4.85e-01 -0.0306 0.0437 0.374 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 9.66e-01 0.00239 0.0565 0.374 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -179240 sc-eQTL 4.01e-01 0.0564 0.067 0.374 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -744335 sc-eQTL 8.24e-01 -0.016 0.0718 0.374 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 9.91e-01 0.000944 0.0813 0.374 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -513538 sc-eQTL 4.50e-02 -0.104 0.0514 0.374 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -205321 sc-eQTL 9.26e-01 -0.00425 0.0456 0.374 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -356305 sc-eQTL 3.65e-01 0.0843 0.0929 0.374 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -857112 sc-eQTL 7.88e-01 0.0258 0.0957 0.374 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -953773 sc-eQTL 3.76e-01 -0.0695 0.0783 0.374 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -179240 sc-eQTL 7.63e-02 0.13 0.0729 0.374 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -744335 sc-eQTL 6.11e-02 -0.148 0.0788 0.377 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 8.10e-01 0.0209 0.0869 0.377 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -513538 sc-eQTL 9.37e-01 0.00565 0.0712 0.377 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -205321 sc-eQTL 2.11e-01 -0.0712 0.0568 0.377 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -356305 sc-eQTL 2.42e-02 0.187 0.0822 0.377 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -857112 sc-eQTL 8.78e-01 -0.0132 0.0863 0.377 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -953773 sc-eQTL 2.48e-01 -0.0947 0.0817 0.377 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -179240 sc-eQTL 9.53e-01 0.00489 0.082 0.377 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -744335 sc-eQTL 2.68e-01 0.0965 0.0869 0.375 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -744529 sc-eQTL 4.57e-01 -0.0443 0.0594 0.375 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -513538 sc-eQTL 6.30e-01 0.0314 0.0652 0.375 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -205321 sc-eQTL 1.71e-02 0.173 0.0719 0.375 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -166051 sc-eQTL 6.75e-01 -0.0353 0.084 0.375 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -179240 sc-eQTL 3.24e-01 0.0715 0.0724 0.375 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -711228 eQTL 0.0334 -0.074 0.0347 0.00107 0.0 0.381

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000060688 \N -744335 2.95e-07 1.35e-07 4.48e-08 2.22e-07 9.25e-08 8.45e-08 1.61e-07 5.43e-08 1.45e-07 5.42e-08 1.57e-07 8.55e-08 1.59e-07 7.13e-08 6.04e-08 7.49e-08 4.09e-08 1.4e-07 6.07e-08 4.21e-08 1.21e-07 1.24e-07 1.44e-07 2.91e-08 1.65e-07 1.26e-07 1.07e-07 9.74e-08 1.16e-07 9.49e-08 1.02e-07 3.64e-08 3.56e-08 8.89e-08 3.81e-08 3.65e-08 5.58e-08 8.93e-08 6.57e-08 4.08e-08 4.92e-08 1.46e-07 5.21e-08 7.43e-09 3.81e-08 1.87e-08 1.21e-07 3.86e-09 4.79e-08