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Genes within 1Mb (chr1:30540928:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -755860 sc-eQTL 7.17e-01 0.0284 0.0784 0.438 B L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 1.47e-01 -0.0909 0.0625 0.438 B L1
ENSG00000134644 PUM1 -525063 sc-eQTL 8.09e-01 0.0127 0.0527 0.438 B L1
ENSG00000162510 MATN1 -182657 sc-eQTL 5.17e-01 -0.036 0.0553 0.438 B L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 1.70e-01 -0.0595 0.0432 0.438 B L1
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 7.78e-01 -0.0143 0.0508 0.438 B L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 8.95e-01 -0.00794 0.0602 0.438 B L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.25e-01 -0.054 0.0675 0.438 CD4T L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.89e-01 -0.0212 0.0528 0.438 CD4T L1
ENSG00000134644 PUM1 -525063 sc-eQTL 5.99e-01 0.0248 0.047 0.438 CD4T L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.67e-01 0.0225 0.0521 0.438 CD4T L1
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 5.83e-01 -0.0256 0.0466 0.438 CD4T L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 5.99e-01 -0.0294 0.0558 0.438 CD4T L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.49e-01 -0.102 0.0885 0.438 CD8T L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 2.38e-01 -0.0696 0.0589 0.438 CD8T L1
ENSG00000134644 PUM1 -525063 sc-eQTL 3.56e-01 0.048 0.0519 0.438 CD8T L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 1.40e-01 -0.0744 0.0503 0.438 CD8T L1
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 5.47e-01 -0.0357 0.0592 0.438 CD8T L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 2.83e-01 -0.0799 0.0742 0.438 CD8T L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 1.85e-01 -0.105 0.0793 0.437 DC L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 1.47e-01 -0.137 0.0938 0.437 DC L1
ENSG00000134644 PUM1 -525063 sc-eQTL 7.12e-01 0.0273 0.0738 0.437 DC L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.50e-01 0.0606 0.0526 0.437 DC L1
ENSG00000168528 SERINC2 -868637 sc-eQTL 1.83e-01 0.116 0.0866 0.437 DC L1
ENSG00000284543 LINC01226 -965298 sc-eQTL 3.59e-01 0.0528 0.0575 0.437 DC L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 1.52e-01 0.119 0.083 0.437 DC L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.01e-01 0.0327 0.0623 0.438 Mono L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.60e-01 0.034 0.0773 0.438 Mono L1
ENSG00000134644 PUM1 -525063 sc-eQTL 1.99e-03 0.152 0.0485 0.438 Mono L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 1.66e-01 0.0631 0.0454 0.438 Mono L1
ENSG00000162512 SDC3 -367830 sc-eQTL 2.25e-02 -0.199 0.0865 0.438 Mono L1
ENSG00000168528 SERINC2 -868637 sc-eQTL 1.62e-01 0.131 0.0936 0.438 Mono L1
ENSG00000284543 LINC01226 -965298 sc-eQTL 1.82e-01 0.11 0.0825 0.438 Mono L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 4.18e-01 -0.0587 0.0723 0.438 Mono L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 3.09e-01 0.0889 0.0871 0.438 NK L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.39e-01 0.0281 0.0597 0.438 NK L1
ENSG00000134644 PUM1 -525063 sc-eQTL 5.76e-01 0.0351 0.0626 0.438 NK L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.72e-01 -0.0644 0.072 0.438 NK L1
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 8.99e-01 -0.0103 0.0811 0.438 NK L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 4.62e-01 -0.0551 0.0748 0.438 NK L1
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.08e-01 -0.0335 0.0651 0.438 Other_T L1
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 3.58e-01 -0.064 0.0695 0.438 Other_T L1
ENSG00000134644 PUM1 -525063 sc-eQTL 9.04e-01 -0.00758 0.0626 0.438 Other_T L1
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.35e-01 -0.0243 0.0513 0.438 Other_T L1
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 6.84e-01 -0.0342 0.084 0.438 Other_T L1
ENSG00000287510 AL137857.1 -190765 sc-eQTL 4.57e-01 -0.065 0.0874 0.438 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.44e-01 0.082 0.107 0.436 B_Activated L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.77e-01 -0.0451 0.108 0.436 B_Activated L2
ENSG00000134644 PUM1 -525063 sc-eQTL 8.59e-02 -0.172 0.0996 0.436 B_Activated L2
ENSG00000162510 MATN1 -182657 sc-eQTL 8.28e-01 0.0192 0.0878 0.436 B_Activated L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.00e-01 -0.0321 0.0612 0.436 B_Activated L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 1.07e-01 0.159 0.0981 0.436 B_Activated L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 8.03e-01 -0.0218 0.0875 0.436 B_Activated L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 7.53e-01 -0.0307 0.0975 0.44 B_Intermediate L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.45e-01 0.0375 0.0813 0.44 B_Intermediate L2
ENSG00000134644 PUM1 -525063 sc-eQTL 3.42e-01 0.0729 0.0765 0.44 B_Intermediate L2
ENSG00000162510 MATN1 -182657 sc-eQTL 6.38e-01 0.0376 0.0798 0.44 B_Intermediate L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 7.28e-01 -0.017 0.049 0.44 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 3.64e-01 -0.0625 0.0686 0.44 B_Intermediate L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.65e-02 0.136 0.0764 0.44 B_Intermediate L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.15e-01 0.0474 0.094 0.44 B_Memory L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 5.68e-01 -0.0495 0.0866 0.44 B_Memory L2
ENSG00000134644 PUM1 -525063 sc-eQTL 9.52e-01 -0.00452 0.0754 0.44 B_Memory L2
ENSG00000162510 MATN1 -182657 sc-eQTL 6.86e-01 0.0292 0.0721 0.44 B_Memory L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.39e-01 -0.0753 0.0638 0.44 B_Memory L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 1.59e-01 0.103 0.0729 0.44 B_Memory L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.07e-01 0.0322 0.0857 0.44 B_Memory L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.79e-01 0.0607 0.0857 0.438 B_Naive1 L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.71e-02 -0.135 0.0735 0.438 B_Naive1 L2
ENSG00000134644 PUM1 -525063 sc-eQTL 8.29e-01 -0.0141 0.0654 0.438 B_Naive1 L2
ENSG00000162510 MATN1 -182657 sc-eQTL 3.39e-01 -0.0634 0.0662 0.438 B_Naive1 L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.08e-01 0.0227 0.0443 0.438 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 5.05e-01 -0.0388 0.0581 0.438 B_Naive1 L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.31e-01 -0.0248 0.0718 0.438 B_Naive1 L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 8.41e-01 -0.0186 0.0929 0.438 B_Naive2 L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 6.94e-02 -0.139 0.0761 0.438 B_Naive2 L2
ENSG00000134644 PUM1 -525063 sc-eQTL 6.66e-01 0.0324 0.075 0.438 B_Naive2 L2
ENSG00000162510 MATN1 -182657 sc-eQTL 7.43e-01 -0.0236 0.072 0.438 B_Naive2 L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 8.98e-01 0.00625 0.0489 0.438 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 4.81e-01 0.0503 0.0711 0.438 B_Naive2 L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 8.09e-01 -0.0187 0.0769 0.438 B_Naive2 L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.89e-01 0.0367 0.0915 0.434 CD4_CTL L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 5.73e-01 -0.0507 0.0899 0.434 CD4_CTL L2
ENSG00000134644 PUM1 -525063 sc-eQTL 5.56e-01 0.052 0.0882 0.434 CD4_CTL L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.22e-01 -0.078 0.0785 0.434 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 4.09e-01 0.0711 0.0859 0.434 CD4_CTL L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.55e-01 0.0703 0.0758 0.434 CD4_CTL L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 3.58e-01 -0.0648 0.0704 0.438 CD4_Naive L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 9.07e-01 -0.0073 0.0625 0.438 CD4_Naive L2
ENSG00000134644 PUM1 -525063 sc-eQTL 9.08e-01 -0.00575 0.0499 0.438 CD4_Naive L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 8.05e-01 0.0132 0.0535 0.438 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 1.02e-01 -0.0885 0.0539 0.438 CD4_Naive L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 6.86e-01 -0.0253 0.0623 0.438 CD4_Naive L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.57e-01 -0.0394 0.0887 0.438 CD4_TCM L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 3.55e-01 -0.0662 0.0714 0.438 CD4_TCM L2
ENSG00000134644 PUM1 -525063 sc-eQTL 8.53e-01 0.0117 0.0633 0.438 CD4_TCM L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 4.78e-01 0.0373 0.0525 0.438 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 3.00e-01 0.0691 0.0665 0.438 CD4_TCM L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.56e-01 -0.0685 0.0741 0.438 CD4_TCM L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 3.41e-01 -0.0842 0.0882 0.438 CD4_TEM L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.61e-02 0.144 0.0836 0.438 CD4_TEM L2
ENSG00000134644 PUM1 -525063 sc-eQTL 8.92e-02 0.119 0.0696 0.438 CD4_TEM L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.09e-01 -0.0364 0.0709 0.438 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 3.63e-01 -0.0755 0.0828 0.438 CD4_TEM L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 2.03e-01 0.104 0.0815 0.438 CD4_TEM L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 3.82e-02 -0.201 0.0962 0.438 CD8_CTL L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 7.37e-01 -0.0251 0.0745 0.438 CD8_CTL L2
ENSG00000134644 PUM1 -525063 sc-eQTL 1.47e-01 0.105 0.072 0.438 CD8_CTL L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.85e-01 -0.0858 0.08 0.438 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 2.80e-01 -0.091 0.084 0.438 CD8_CTL L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 4.41e-01 -0.0611 0.0792 0.438 CD8_CTL L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 5.61e-01 0.0513 0.088 0.438 CD8_Naive L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 4.02e-01 -0.0637 0.0758 0.438 CD8_Naive L2
ENSG00000134644 PUM1 -525063 sc-eQTL 2.84e-01 0.0655 0.061 0.438 CD8_Naive L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.86e-01 0.0625 0.0584 0.438 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 3.87e-01 -0.0633 0.073 0.438 CD8_Naive L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 8.91e-01 -0.0109 0.0796 0.438 CD8_Naive L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 1.06e-02 -0.249 0.0963 0.438 CD8_TCM L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 9.27e-01 0.00829 0.0898 0.438 CD8_TCM L2
ENSG00000134644 PUM1 -525063 sc-eQTL 2.77e-01 -0.0917 0.0842 0.438 CD8_TCM L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 1.08e-01 -0.142 0.0878 0.438 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 6.85e-01 -0.0332 0.0818 0.438 CD8_TCM L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.71e-01 -0.0241 0.0827 0.438 CD8_TCM L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.03e-01 0.116 0.091 0.445 CD8_TEM L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 3.45e-02 -0.184 0.0867 0.445 CD8_TEM L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.77e-01 -0.0637 0.0895 0.445 CD8_TEM L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.31e-01 -0.101 0.0839 0.445 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 8.97e-01 0.0113 0.0874 0.445 CD8_TEM L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 6.12e-01 -0.0402 0.0791 0.445 CD8_TEM L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.44e-01 -0.108 0.0928 0.437 MAIT L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 5.34e-01 -0.0513 0.0824 0.437 MAIT L2
ENSG00000134644 PUM1 -525063 sc-eQTL 5.93e-01 -0.0423 0.079 0.437 MAIT L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 5.41e-01 0.0457 0.0745 0.437 MAIT L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 8.41e-01 0.0167 0.0831 0.437 MAIT L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 9.52e-01 -0.00512 0.0856 0.437 MAIT L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.61e-01 0.0715 0.0968 0.442 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 5.11e-01 0.0539 0.0818 0.442 NK_CD56bright L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.99e-01 0.0582 0.0859 0.442 NK_CD56bright L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 9.67e-01 0.00355 0.0848 0.442 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 8.51e-01 -0.0161 0.0852 0.442 NK_CD56bright L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 9.58e-01 0.00446 0.084 0.442 NK_CD56bright L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.76e-01 -0.0386 0.0923 0.44 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.03e-01 0.017 0.0682 0.44 NK_CD56dim L2
ENSG00000134644 PUM1 -525063 sc-eQTL 6.66e-01 0.0303 0.07 0.44 NK_CD56dim L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 4.15e-01 -0.0609 0.0746 0.44 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 9.79e-01 -0.00247 0.0936 0.44 NK_CD56dim L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 9.36e-01 -0.00618 0.0772 0.44 NK_CD56dim L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 6.20e-01 0.0482 0.0968 0.434 NK_HLA L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 4.84e-01 -0.0606 0.0864 0.434 NK_HLA L2
ENSG00000134644 PUM1 -525063 sc-eQTL 7.63e-01 0.0254 0.0843 0.434 NK_HLA L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.05e-01 -0.0825 0.0803 0.434 NK_HLA L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 9.76e-01 0.0026 0.0856 0.434 NK_HLA L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.15e-01 -0.0831 0.0826 0.434 NK_HLA L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 3.71e-01 0.0806 0.09 0.44 NK_cytokine L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 1.84e-01 0.0934 0.0701 0.44 NK_cytokine L2
ENSG00000134644 PUM1 -525063 sc-eQTL 5.67e-01 -0.0436 0.076 0.44 NK_cytokine L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.47e-01 -0.0788 0.0836 0.44 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 4.71e-01 -0.064 0.0887 0.44 NK_cytokine L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 5.08e-01 -0.0548 0.0825 0.44 NK_cytokine L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 8.85e-01 0.0159 0.11 0.467 PB L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 1.04e-01 -0.206 0.126 0.467 PB L2
ENSG00000134644 PUM1 -525063 sc-eQTL 9.84e-01 -0.00225 0.11 0.467 PB L2
ENSG00000162510 MATN1 -182657 sc-eQTL 7.86e-01 0.0279 0.103 0.467 PB L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.80e-01 0.0794 0.0731 0.467 PB L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 6.79e-01 -0.0417 0.101 0.467 PB L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 6.44e-01 -0.0496 0.107 0.467 PB L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 1.52e-01 -0.1 0.0696 0.435 Pro_T L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 5.37e-01 -0.0549 0.0887 0.435 Pro_T L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.55e-01 -0.062 0.0827 0.435 Pro_T L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.54e-01 -0.0551 0.0593 0.435 Pro_T L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 5.27e-02 -0.16 0.0823 0.435 Pro_T L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.61e-01 -0.0698 0.0762 0.435 Pro_T L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.28e-01 -0.11 0.0913 0.438 Treg L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.99e-01 0.0112 0.0886 0.438 Treg L2
ENSG00000134644 PUM1 -525063 sc-eQTL 1.57e-01 0.1 0.0706 0.438 Treg L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 7.26e-01 0.0285 0.0812 0.438 Treg L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 8.25e-01 -0.0184 0.0827 0.438 Treg L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 5.45e-01 0.0501 0.0826 0.438 Treg L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 1.98e-01 -0.117 0.0909 0.441 cDC L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.80e-01 -0.015 0.0988 0.441 cDC L2
ENSG00000134644 PUM1 -525063 sc-eQTL 8.19e-01 0.0195 0.0849 0.441 cDC L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 4.71e-01 0.0429 0.0594 0.441 cDC L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 1.07e-02 0.194 0.075 0.441 cDC L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 1.80e-01 -0.1 0.0747 0.441 cDC L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.63e-02 0.143 0.0801 0.441 cDC L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 5.16e-01 0.0484 0.0744 0.438 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 9.98e-01 -0.000194 0.0831 0.438 cMono_IL1B L2
ENSG00000134644 PUM1 -525063 sc-eQTL 3.00e-03 0.165 0.0551 0.438 cMono_IL1B L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 4.31e-01 0.0389 0.0493 0.438 cMono_IL1B L2
ENSG00000162512 SDC3 -367830 sc-eQTL 5.43e-02 -0.178 0.0921 0.438 cMono_IL1B L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 1.79e-01 0.126 0.0937 0.438 cMono_IL1B L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 7.98e-01 0.0213 0.0832 0.438 cMono_IL1B L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 7.43e-01 -0.0255 0.0776 0.438 cMono_IL1B L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 9.50e-01 -0.005 0.0789 0.438 cMono_S100A L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 7.32e-01 0.032 0.0932 0.438 cMono_S100A L2
ENSG00000134644 PUM1 -525063 sc-eQTL 2.15e-01 0.0836 0.0672 0.438 cMono_S100A L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 4.08e-01 0.0429 0.0517 0.438 cMono_S100A L2
ENSG00000162512 SDC3 -367830 sc-eQTL 2.37e-01 -0.106 0.0892 0.438 cMono_S100A L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 4.77e-02 0.187 0.0939 0.438 cMono_S100A L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 5.76e-02 0.146 0.0763 0.438 cMono_S100A L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.68e-01 -0.0697 0.0771 0.438 cMono_S100A L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 1.96e-01 0.148 0.114 0.448 gdT L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 4.32e-01 0.0774 0.0981 0.448 gdT L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.63e-01 0.0745 0.101 0.448 gdT L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 6.10e-01 -0.0563 0.11 0.448 gdT L2
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 7.62e-01 0.0308 0.102 0.448 gdT L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 1.24e-01 -0.151 0.0977 0.448 gdT L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.91e-01 0.0915 0.0865 0.433 intMono L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.48e-01 -0.0179 0.0932 0.433 intMono L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.90e-01 -0.0547 0.079 0.433 intMono L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 1.82e-01 0.0827 0.0618 0.433 intMono L2
ENSG00000162512 SDC3 -367830 sc-eQTL 6.92e-02 -0.154 0.0843 0.433 intMono L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 3.44e-01 0.0843 0.0888 0.433 intMono L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 9.50e-01 -0.0053 0.0843 0.433 intMono L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 5.30e-01 -0.053 0.0842 0.433 intMono L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.02e-01 0.069 0.0821 0.443 ncMono L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 9.14e-01 0.00944 0.0877 0.443 ncMono L2
ENSG00000134644 PUM1 -525063 sc-eQTL 4.42e-01 0.0552 0.0716 0.443 ncMono L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.87e-01 0.0693 0.0649 0.443 ncMono L2
ENSG00000162512 SDC3 -367830 sc-eQTL 6.88e-03 -0.196 0.0716 0.443 ncMono L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 6.00e-01 0.0418 0.0796 0.443 ncMono L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 2.10e-01 0.0997 0.0793 0.443 ncMono L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.00e-01 -0.0856 0.0823 0.443 ncMono L2
ENSG00000060688 SNRNP40 -755860 sc-eQTL 2.30e-01 -0.113 0.0936 0.441 pDC L2
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.18e-01 -0.0238 0.103 0.441 pDC L2
ENSG00000134644 PUM1 -525063 sc-eQTL 5.01e-02 0.167 0.0845 0.441 pDC L2
ENSG00000162511 LAPTM5 -216846 sc-eQTL 5.61e-01 0.0462 0.0794 0.441 pDC L2
ENSG00000168528 SERINC2 -868637 sc-eQTL 3.02e-01 0.0995 0.0961 0.441 pDC L2
ENSG00000284543 LINC01226 -965298 sc-eQTL 8.12e-01 0.0178 0.0748 0.441 pDC L2
ENSG00000287510 AL137857.1 -190765 sc-eQTL 1.49e-01 -0.127 0.0875 0.441 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -755860 sc-eQTL 4.92e-01 0.0634 0.0921 0.438 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.18e-01 0.0177 0.0768 0.438 B_Memory LOneK1K
ENSG00000134644 PUM1 -525063 sc-eQTL 3.94e-01 0.058 0.0679 0.438 B_Memory LOneK1K
ENSG00000162510 MATN1 -182657 sc-eQTL 5.70e-01 0.0441 0.0775 0.438 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -216846 sc-eQTL 3.98e-01 -0.0412 0.0487 0.438 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 6.27e-01 0.0313 0.0644 0.438 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -190765 sc-eQTL 3.66e-01 0.0636 0.0701 0.438 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -755860 sc-eQTL 5.18e-01 0.0546 0.0845 0.438 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 2.88e-02 -0.145 0.0661 0.438 B_Naive LOneK1K
ENSG00000134644 PUM1 -525063 sc-eQTL 4.31e-01 0.0498 0.0631 0.438 B_Naive LOneK1K
ENSG00000162510 MATN1 -182657 sc-eQTL 2.17e-01 -0.0752 0.0607 0.438 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.91e-01 0.0453 0.0427 0.438 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 3.85e-01 -0.0481 0.0552 0.438 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -190765 sc-eQTL 9.77e-01 0.00186 0.0658 0.438 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -755860 sc-eQTL 9.69e-01 0.00277 0.0714 0.438 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.11e-01 0.0193 0.0808 0.438 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -525063 sc-eQTL 2.76e-03 0.153 0.0505 0.438 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.20e-01 0.0556 0.0452 0.438 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -367830 sc-eQTL 9.10e-02 -0.156 0.0918 0.438 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -868637 sc-eQTL 1.30e-01 0.144 0.0946 0.438 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -965298 sc-eQTL 4.10e-01 0.0643 0.0779 0.438 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -190765 sc-eQTL 5.70e-01 -0.0415 0.073 0.438 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -755860 sc-eQTL 8.92e-02 0.132 0.0773 0.435 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 8.12e-01 -0.0202 0.0851 0.435 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -525063 sc-eQTL 5.28e-01 0.044 0.0697 0.435 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.04e-01 0.0709 0.0556 0.435 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -367830 sc-eQTL 2.13e-02 -0.187 0.0804 0.435 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -868637 sc-eQTL 4.76e-01 0.0603 0.0844 0.435 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -965298 sc-eQTL 3.94e-01 0.0683 0.0801 0.435 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -190765 sc-eQTL 2.38e-01 -0.0948 0.08 0.435 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -755860 sc-eQTL 5.44e-01 0.0533 0.0876 0.44 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -756054 sc-eQTL 3.61e-01 0.0547 0.0598 0.44 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -525063 sc-eQTL 6.19e-01 0.0326 0.0656 0.44 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -216846 sc-eQTL 2.55e-01 -0.0834 0.0731 0.44 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -177576 sc-eQTL 9.27e-01 -0.0078 0.0846 0.44 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -190765 sc-eQTL 4.68e-01 -0.0529 0.0729 0.44 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -965353 2.74e-07 1.25e-07 3.88e-08 1.8e-07 9.21e-08 1e-07 1.49e-07 5.2e-08 1.44e-07 4.74e-08 1.62e-07 8.55e-08 1.45e-07 6.56e-08 6.17e-08 7.3e-08 3.98e-08 1.26e-07 5.39e-08 4.04e-08 1.04e-07 1.27e-07 1.39e-07 3.49e-08 1.4e-07 1.14e-07 1.06e-07 9.57e-08 1.09e-07 1.07e-07 9.64e-08 3.87e-08 3.16e-08 8.44e-08 8.38e-08 3.95e-08 5.02e-08 9.25e-08 6.54e-08 3.77e-08 5.43e-08 1.33e-07 4.89e-08 2.63e-08 5.15e-08 1.99e-08 1.19e-07 3.86e-09 4.79e-08