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Genes within 1Mb (chr1:30539410:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.33e-02 -0.134 0.0795 0.346 B L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 8.74e-02 0.109 0.0637 0.346 B L1
ENSG00000134644 PUM1 -526581 sc-eQTL 4.14e-01 0.044 0.0537 0.346 B L1
ENSG00000162510 MATN1 -184175 sc-eQTL 9.13e-01 0.00617 0.0565 0.346 B L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 8.52e-01 0.00829 0.0443 0.346 B L1
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.18e-01 0.0336 0.0518 0.346 B L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.81e-01 -0.0171 0.0614 0.346 B L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 2.05e-01 0.087 0.0684 0.346 CD4T L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 2.44e-01 -0.0625 0.0535 0.346 CD4T L1
ENSG00000134644 PUM1 -526581 sc-eQTL 8.08e-01 0.0116 0.0478 0.346 CD4T L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.97e-01 0.000207 0.0529 0.346 CD4T L1
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 2.29e-01 -0.0569 0.0472 0.346 CD4T L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 9.82e-01 -0.00128 0.0567 0.346 CD4T L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.00e-01 0.0114 0.0907 0.346 CD8T L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.54e-01 0.056 0.0602 0.346 CD8T L1
ENSG00000134644 PUM1 -526581 sc-eQTL 1.53e-01 -0.0759 0.0529 0.346 CD8T L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.22e-01 0.0629 0.0514 0.346 CD8T L1
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 6.92e-01 0.024 0.0605 0.346 CD8T L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 9.56e-01 -0.00416 0.076 0.346 CD8T L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.84e-02 0.132 0.0793 0.349 DC L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.14e-01 0.0617 0.0945 0.349 DC L1
ENSG00000134644 PUM1 -526581 sc-eQTL 7.67e-01 0.022 0.0741 0.349 DC L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.23e-01 -0.0338 0.0529 0.349 DC L1
ENSG00000168528 SERINC2 -870155 sc-eQTL 8.66e-01 -0.0148 0.0872 0.349 DC L1
ENSG00000284543 LINC01226 -966816 sc-eQTL 9.81e-01 0.00139 0.0578 0.349 DC L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 5.89e-01 -0.0453 0.0836 0.349 DC L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 7.65e-01 0.0188 0.0628 0.346 Mono L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.10e-01 -0.0791 0.0777 0.346 Mono L1
ENSG00000134644 PUM1 -526581 sc-eQTL 2.58e-02 -0.111 0.0493 0.346 Mono L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 1.97e-01 -0.0592 0.0457 0.346 Mono L1
ENSG00000162512 SDC3 -369348 sc-eQTL 3.61e-01 0.0806 0.0881 0.346 Mono L1
ENSG00000168528 SERINC2 -870155 sc-eQTL 1.24e-01 -0.145 0.0942 0.346 Mono L1
ENSG00000284543 LINC01226 -966816 sc-eQTL 4.64e-01 0.0611 0.0833 0.346 Mono L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 5.07e-01 -0.0485 0.0728 0.346 Mono L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 3.92e-01 -0.0752 0.0877 0.345 NK L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.57e-01 0.0555 0.06 0.345 NK L1
ENSG00000134644 PUM1 -526581 sc-eQTL 3.87e-01 -0.0546 0.063 0.345 NK L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.00e-01 -0.0929 0.0723 0.345 NK L1
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 1.92e-01 0.106 0.0813 0.345 NK L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.77e-01 0.0214 0.0753 0.345 NK L1
ENSG00000060688 SNRNP40 -757378 sc-eQTL 4.12e-01 -0.0541 0.0658 0.346 Other_T L1
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.01e-01 0.0474 0.0704 0.346 Other_T L1
ENSG00000134644 PUM1 -526581 sc-eQTL 4.38e-01 0.0492 0.0632 0.346 Other_T L1
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.73e-01 0.0292 0.0519 0.346 Other_T L1
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 9.22e-01 0.00835 0.085 0.346 Other_T L1
ENSG00000287510 AL137857.1 -192283 sc-eQTL 9.06e-01 0.0104 0.0885 0.346 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.90e-01 0.0566 0.105 0.344 B_Activated L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 2.66e-01 0.118 0.106 0.344 B_Activated L2
ENSG00000134644 PUM1 -526581 sc-eQTL 3.66e-02 0.205 0.0973 0.344 B_Activated L2
ENSG00000162510 MATN1 -184175 sc-eQTL 4.56e-01 -0.0642 0.0859 0.344 B_Activated L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 6.91e-01 -0.0239 0.06 0.344 B_Activated L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 2.63e-01 -0.109 0.0966 0.344 B_Activated L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 3.60e-01 -0.0786 0.0856 0.344 B_Activated L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.79e-01 -0.00258 0.098 0.345 B_Intermediate L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 6.19e-01 -0.0407 0.0816 0.345 B_Intermediate L2
ENSG00000134644 PUM1 -526581 sc-eQTL 6.51e-01 -0.0349 0.077 0.345 B_Intermediate L2
ENSG00000162510 MATN1 -184175 sc-eQTL 1.48e-01 -0.116 0.0798 0.345 B_Intermediate L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 8.98e-01 0.0063 0.0492 0.345 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 4.53e-01 0.0518 0.069 0.345 B_Intermediate L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 3.82e-01 -0.0676 0.0771 0.345 B_Intermediate L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 1.41e-01 -0.138 0.0935 0.345 B_Memory L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 9.91e-01 0.000968 0.0866 0.345 B_Memory L2
ENSG00000134644 PUM1 -526581 sc-eQTL 1.29e-01 0.114 0.075 0.345 B_Memory L2
ENSG00000162510 MATN1 -184175 sc-eQTL 2.08e-01 0.0906 0.0718 0.345 B_Memory L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.16e-01 0.079 0.0637 0.345 B_Memory L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.40e-01 -0.0448 0.0731 0.345 B_Memory L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 1.19e-01 -0.133 0.0852 0.345 B_Memory L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 4.71e-01 -0.0623 0.0863 0.346 B_Naive1 L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 6.52e-03 0.201 0.0733 0.346 B_Naive1 L2
ENSG00000134644 PUM1 -526581 sc-eQTL 9.99e-01 -5.7e-05 0.0658 0.346 B_Naive1 L2
ENSG00000162510 MATN1 -184175 sc-eQTL 2.88e-01 0.0709 0.0666 0.346 B_Naive1 L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.61e-01 -0.0501 0.0445 0.346 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.37e-01 0.0362 0.0585 0.346 B_Naive1 L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 2.08e-01 -0.0911 0.0721 0.346 B_Naive1 L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 8.24e-01 0.0206 0.0927 0.345 B_Naive2 L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.39e-01 0.0732 0.0764 0.345 B_Naive2 L2
ENSG00000134644 PUM1 -526581 sc-eQTL 4.94e-01 0.0513 0.0749 0.345 B_Naive2 L2
ENSG00000162510 MATN1 -184175 sc-eQTL 3.75e-01 -0.0639 0.0718 0.345 B_Naive2 L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 8.40e-01 0.00986 0.0488 0.345 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 9.98e-01 -0.000139 0.0711 0.345 B_Naive2 L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 6.02e-01 0.0402 0.0768 0.345 B_Naive2 L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 6.45e-01 0.0429 0.0929 0.357 CD4_CTL L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 2.05e-01 0.116 0.0911 0.357 CD4_CTL L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.22e-01 0.109 0.0894 0.357 CD4_CTL L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 6.02e-01 0.0418 0.0799 0.357 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 3.56e-01 -0.0808 0.0873 0.357 CD4_CTL L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 6.00e-01 -0.0405 0.0771 0.357 CD4_CTL L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 1.80e-01 0.0955 0.071 0.346 CD4_Naive L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 1.08e-01 -0.101 0.0628 0.346 CD4_Naive L2
ENSG00000134644 PUM1 -526581 sc-eQTL 8.69e-01 -0.00832 0.0505 0.346 CD4_Naive L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.92e-01 -0.029 0.054 0.346 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 7.52e-01 -0.0174 0.0549 0.346 CD4_Naive L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 5.93e-01 0.0337 0.063 0.346 CD4_Naive L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.37e-01 0.00729 0.0915 0.346 CD4_TCM L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.71e-01 -0.0215 0.0737 0.346 CD4_TCM L2
ENSG00000134644 PUM1 -526581 sc-eQTL 7.26e-01 0.0229 0.0653 0.346 CD4_TCM L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 7.32e-01 -0.0186 0.0541 0.346 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.38e-02 -0.132 0.0681 0.346 CD4_TCM L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 8.63e-01 -0.0132 0.0765 0.346 CD4_TCM L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 4.09e-01 0.0738 0.0892 0.346 CD4_TEM L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 9.31e-01 -0.0074 0.0852 0.346 CD4_TEM L2
ENSG00000134644 PUM1 -526581 sc-eQTL 4.16e-01 -0.0578 0.0708 0.346 CD4_TEM L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.19e-01 -0.00729 0.0717 0.346 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 7.16e-01 -0.0305 0.0839 0.346 CD4_TEM L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 3.60e-01 -0.0757 0.0825 0.346 CD4_TEM L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 4.33e-02 0.199 0.0977 0.346 CD8_CTL L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.80e-01 0.0419 0.0756 0.346 CD8_CTL L2
ENSG00000134644 PUM1 -526581 sc-eQTL 1.45e-01 -0.107 0.0731 0.346 CD8_CTL L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 6.61e-01 0.0357 0.0813 0.346 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 8.50e-01 0.0162 0.0855 0.346 CD8_CTL L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 4.54e-01 -0.0603 0.0803 0.346 CD8_CTL L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 4.20e-01 -0.0719 0.089 0.346 CD8_Naive L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 6.03e-01 0.04 0.0768 0.346 CD8_Naive L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.64e-01 -0.0692 0.0617 0.346 CD8_Naive L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.69e-01 0.00233 0.0593 0.346 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 2.47e-01 0.0857 0.0738 0.346 CD8_Naive L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 8.86e-01 -0.0116 0.0806 0.346 CD8_Naive L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 6.52e-03 0.266 0.0968 0.347 CD8_TCM L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.21e-01 -0.0324 0.0905 0.347 CD8_TCM L2
ENSG00000134644 PUM1 -526581 sc-eQTL 4.76e-01 -0.0606 0.085 0.347 CD8_TCM L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.71e-01 0.0505 0.089 0.347 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 9.82e-01 -0.0019 0.0824 0.347 CD8_TCM L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.11e-01 0.0309 0.0833 0.347 CD8_TCM L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 7.11e-02 -0.17 0.0937 0.349 CD8_TEM L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.61e-02 0.16 0.0899 0.349 CD8_TEM L2
ENSG00000134644 PUM1 -526581 sc-eQTL 9.64e-02 0.154 0.092 0.349 CD8_TEM L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.50e-01 0.0815 0.0869 0.349 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 4.17e-01 0.0733 0.0903 0.349 CD8_TEM L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 3.13e-01 -0.0826 0.0816 0.349 CD8_TEM L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.10e-01 0.011 0.0966 0.351 MAIT L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.83e-01 0.047 0.0855 0.351 MAIT L2
ENSG00000134644 PUM1 -526581 sc-eQTL 5.63e-01 0.0474 0.082 0.351 MAIT L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.88e-01 -0.042 0.0773 0.351 MAIT L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 9.88e-01 0.00126 0.0862 0.351 MAIT L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 2.29e-01 -0.107 0.0885 0.351 MAIT L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.05e-01 0.0656 0.0982 0.342 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 8.81e-01 -0.0125 0.0831 0.342 NK_CD56bright L2
ENSG00000134644 PUM1 -526581 sc-eQTL 6.04e-01 -0.0452 0.0872 0.342 NK_CD56bright L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.23e-01 -0.085 0.0858 0.342 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.26e-01 -0.0549 0.0864 0.342 NK_CD56bright L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 9.76e-01 -0.00258 0.0852 0.342 NK_CD56bright L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 7.46e-01 0.0304 0.0938 0.345 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 2.84e-01 0.0744 0.0692 0.345 NK_CD56dim L2
ENSG00000134644 PUM1 -526581 sc-eQTL 5.97e-02 -0.134 0.0706 0.345 NK_CD56dim L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 1.66e-01 -0.105 0.0755 0.345 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 1.71e-01 0.13 0.0947 0.345 NK_CD56dim L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.94e-01 0.0206 0.0784 0.345 NK_CD56dim L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 7.69e-01 -0.0292 0.0991 0.356 NK_HLA L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 4.79e-01 -0.0627 0.0884 0.356 NK_HLA L2
ENSG00000134644 PUM1 -526581 sc-eQTL 6.60e-01 0.038 0.0862 0.356 NK_HLA L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 8.09e-01 -0.0199 0.0823 0.356 NK_HLA L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 3.52e-01 0.0815 0.0874 0.356 NK_HLA L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 8.94e-01 0.0113 0.0847 0.356 NK_HLA L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 6.37e-01 -0.0429 0.0907 0.345 NK_cytokine L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.94e-01 -0.0185 0.0708 0.345 NK_cytokine L2
ENSG00000134644 PUM1 -526581 sc-eQTL 5.59e-01 0.0448 0.0765 0.345 NK_cytokine L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 1.85e-01 -0.112 0.084 0.345 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 6.06e-01 0.0461 0.0893 0.345 NK_cytokine L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 6.24e-01 -0.0408 0.0831 0.345 NK_cytokine L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 3.34e-01 -0.11 0.113 0.333 PB L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 8.88e-01 -0.0187 0.132 0.333 PB L2
ENSG00000134644 PUM1 -526581 sc-eQTL 8.25e-01 0.0254 0.115 0.333 PB L2
ENSG00000162510 MATN1 -184175 sc-eQTL 9.26e-01 -0.00993 0.107 0.333 PB L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 6.29e-01 -0.037 0.0764 0.333 PB L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 1.14e-01 0.165 0.103 0.333 PB L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.47e-01 0.0359 0.111 0.333 PB L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.01e-01 0.0484 0.0717 0.348 Pro_T L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.86e-01 0.0791 0.091 0.348 Pro_T L2
ENSG00000134644 PUM1 -526581 sc-eQTL 8.02e-01 -0.0214 0.085 0.348 Pro_T L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.61e-01 -0.00301 0.061 0.348 Pro_T L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 1.28e-01 0.13 0.0847 0.348 Pro_T L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 6.85e-01 0.0319 0.0784 0.348 Pro_T L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.45e-01 -0.0064 0.0931 0.346 Treg L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.01e-01 -0.0932 0.0898 0.346 Treg L2
ENSG00000134644 PUM1 -526581 sc-eQTL 9.77e-01 -0.00211 0.0721 0.346 Treg L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.11e-01 0.0835 0.0823 0.346 Treg L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 7.43e-01 0.0276 0.0841 0.346 Treg L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 5.39e-01 -0.0516 0.0839 0.346 Treg L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 1.06e-01 0.147 0.0902 0.346 cDC L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 9.87e-01 -0.00155 0.0983 0.346 cDC L2
ENSG00000134644 PUM1 -526581 sc-eQTL 9.30e-01 -0.00748 0.0845 0.346 cDC L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.07e-01 -0.0604 0.059 0.346 cDC L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 5.45e-02 -0.146 0.0753 0.346 cDC L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 7.81e-02 0.131 0.0741 0.346 cDC L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 1.30e-01 -0.121 0.0799 0.346 cDC L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 7.65e-01 0.0225 0.0751 0.346 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 9.71e-01 0.00308 0.0837 0.346 cMono_IL1B L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.18e-02 -0.129 0.056 0.346 cMono_IL1B L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.62e-01 -0.0558 0.0496 0.346 cMono_IL1B L2
ENSG00000162512 SDC3 -369348 sc-eQTL 8.01e-01 0.0236 0.0937 0.346 cMono_IL1B L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 1.01e-01 -0.155 0.0943 0.346 cMono_IL1B L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 6.32e-01 0.0401 0.0838 0.346 cMono_IL1B L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 4.04e-01 -0.0654 0.0781 0.346 cMono_IL1B L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 9.09e-01 0.00913 0.0795 0.346 cMono_S100A L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.00e-01 -0.0634 0.0939 0.346 cMono_S100A L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.44e-01 -0.0791 0.0677 0.346 cMono_S100A L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 6.00e-01 -0.0274 0.0522 0.346 cMono_S100A L2
ENSG00000162512 SDC3 -369348 sc-eQTL 9.35e-02 0.151 0.0896 0.346 cMono_S100A L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 8.33e-02 -0.165 0.0948 0.346 cMono_S100A L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 2.90e-01 0.082 0.0774 0.346 cMono_S100A L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 9.82e-01 0.00171 0.0779 0.346 cMono_S100A L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.37e-01 -0.0719 0.116 0.342 gdT L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 1.55e-01 -0.142 0.0991 0.342 gdT L2
ENSG00000134644 PUM1 -526581 sc-eQTL 9.60e-01 -0.00517 0.103 0.342 gdT L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.01e-01 0.0753 0.112 0.342 gdT L2
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 8.29e-01 0.0224 0.103 0.342 gdT L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 2.03e-01 0.127 0.0994 0.342 gdT L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 8.01e-01 -0.022 0.0873 0.351 intMono L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 2.35e-01 -0.111 0.0935 0.351 intMono L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.48e-01 -0.092 0.0794 0.351 intMono L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.71e-02 -0.137 0.0617 0.351 intMono L2
ENSG00000162512 SDC3 -369348 sc-eQTL 5.18e-01 0.0554 0.0854 0.351 intMono L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 9.06e-02 -0.151 0.0889 0.351 intMono L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 2.41e-01 0.0994 0.0846 0.351 intMono L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 8.08e-01 -0.0206 0.0849 0.351 intMono L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 8.88e-01 -0.0117 0.0826 0.348 ncMono L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.40e-01 -0.0292 0.0881 0.348 ncMono L2
ENSG00000134644 PUM1 -526581 sc-eQTL 2.19e-01 -0.0885 0.0717 0.348 ncMono L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.41e-01 -0.00484 0.0654 0.348 ncMono L2
ENSG00000162512 SDC3 -369348 sc-eQTL 7.99e-03 0.193 0.072 0.348 ncMono L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 1.98e-01 -0.103 0.0797 0.348 ncMono L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 9.52e-01 0.00486 0.0799 0.348 ncMono L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 4.46e-01 0.0632 0.0828 0.348 ncMono L2
ENSG00000060688 SNRNP40 -757378 sc-eQTL 6.54e-02 0.165 0.089 0.359 pDC L2
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 3.46e-01 0.0931 0.0985 0.359 pDC L2
ENSG00000134644 PUM1 -526581 sc-eQTL 8.53e-01 -0.0152 0.0819 0.359 pDC L2
ENSG00000162511 LAPTM5 -218364 sc-eQTL 5.10e-01 -0.0502 0.076 0.359 pDC L2
ENSG00000168528 SERINC2 -870155 sc-eQTL 9.13e-01 0.01 0.0923 0.359 pDC L2
ENSG00000284543 LINC01226 -966816 sc-eQTL 7.37e-01 0.0241 0.0716 0.359 pDC L2
ENSG00000287510 AL137857.1 -192283 sc-eQTL 8.73e-01 -0.0135 0.0843 0.359 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757378 sc-eQTL 6.19e-01 -0.0465 0.0935 0.346 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.38e-01 -0.0261 0.0778 0.346 B_Memory LOneK1K
ENSG00000134644 PUM1 -526581 sc-eQTL 4.19e-01 0.0558 0.0689 0.346 B_Memory LOneK1K
ENSG00000162510 MATN1 -184175 sc-eQTL 1.71e-01 -0.107 0.0783 0.346 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -218364 sc-eQTL 9.30e-01 0.00433 0.0494 0.346 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 6.90e-01 -0.0261 0.0653 0.346 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -192283 sc-eQTL 2.98e-01 -0.0741 0.0711 0.346 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.38e-01 -0.052 0.0842 0.346 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 1.22e-02 0.166 0.0657 0.346 B_Naive LOneK1K
ENSG00000134644 PUM1 -526581 sc-eQTL 8.05e-01 0.0156 0.063 0.346 B_Naive LOneK1K
ENSG00000162510 MATN1 -184175 sc-eQTL 5.65e-01 0.035 0.0607 0.346 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.25e-01 -0.0519 0.0426 0.346 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 5.18e-01 0.0357 0.0551 0.346 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -192283 sc-eQTL 4.74e-01 -0.047 0.0655 0.346 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.76e-01 0.04 0.0715 0.346 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 7.74e-01 -0.0233 0.081 0.346 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -526581 sc-eQTL 3.19e-02 -0.11 0.0511 0.346 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -218364 sc-eQTL 2.07e-01 -0.0573 0.0452 0.346 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -369348 sc-eQTL 6.12e-01 0.047 0.0926 0.346 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -870155 sc-eQTL 1.09e-01 -0.153 0.0947 0.346 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -966816 sc-eQTL 2.92e-01 0.0824 0.0779 0.346 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -192283 sc-eQTL 4.75e-01 -0.0523 0.0731 0.346 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -757378 sc-eQTL 5.25e-01 -0.05 0.0785 0.347 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 1.79e-01 -0.115 0.0856 0.347 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -526581 sc-eQTL 2.24e-01 -0.0855 0.0702 0.347 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.55e-01 -0.0521 0.0562 0.347 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -369348 sc-eQTL 3.23e-01 0.0813 0.0821 0.347 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -870155 sc-eQTL 1.86e-01 -0.113 0.085 0.347 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -966816 sc-eQTL 6.04e-01 0.042 0.081 0.347 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -192283 sc-eQTL 5.71e-01 0.0459 0.081 0.347 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -757378 sc-eQTL 3.82e-01 -0.0773 0.0882 0.345 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -757572 sc-eQTL 5.26e-01 0.0384 0.0603 0.345 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -526581 sc-eQTL 3.49e-01 -0.0619 0.066 0.345 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -218364 sc-eQTL 3.13e-01 -0.0746 0.0737 0.345 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -179094 sc-eQTL 1.88e-01 0.112 0.0849 0.345 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -192283 sc-eQTL 7.38e-01 0.0246 0.0736 0.345 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000134644 PUM1 -526581 eQTL 0.0101 0.0372 0.0144 0.0 0.0 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -966871 2.76e-07 1.27e-07 5.35e-08 1.81e-07 1.01e-07 9.48e-08 1.6e-07 5.66e-08 1.47e-07 6.08e-08 1.57e-07 1.05e-07 1.59e-07 7.37e-08 6.18e-08 7.74e-08 4.24e-08 1.44e-07 6.32e-08 4.3e-08 1.26e-07 1.25e-07 1.44e-07 2.91e-08 1.55e-07 1.22e-07 1.13e-07 9.74e-08 1.23e-07 1e-07 1.02e-07 3.1e-08 4.02e-08 8.72e-08 5.64e-08 3.28e-08 5.29e-08 8.71e-08 6.86e-08 3.92e-08 5e-08 1.4e-07 5.2e-08 1.42e-08 4.7e-08 1.86e-08 1.2e-07 1.88e-09 5e-08