logo

Genes within 1Mb (chr1:30539140:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.67e-03 -0.237 0.0848 0.306 B L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 2.01e-01 -0.0884 0.0689 0.306 B L1
ENSG00000134644 PUM1 -526851 sc-eQTL 1.91e-01 0.0759 0.0578 0.306 B L1
ENSG00000162510 MATN1 -184445 sc-eQTL 3.97e-01 -0.0517 0.0609 0.306 B L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.40e-01 -0.0705 0.0475 0.306 B L1
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 4.65e-01 0.0409 0.0559 0.306 B L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 3.83e-01 -0.0578 0.0662 0.306 B L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 9.89e-01 -0.00107 0.0741 0.306 CD4T L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 2.87e-01 -0.0616 0.0577 0.306 CD4T L1
ENSG00000134644 PUM1 -526851 sc-eQTL 9.32e-02 -0.0863 0.0512 0.306 CD4T L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 4.56e-01 0.0426 0.057 0.306 CD4T L1
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 7.83e-01 -0.0141 0.0511 0.306 CD4T L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.27e-01 -0.0387 0.0611 0.306 CD4T L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.58e-01 -0.111 0.0982 0.306 CD8T L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.67e-01 0.00271 0.0656 0.306 CD8T L1
ENSG00000134644 PUM1 -526851 sc-eQTL 2.61e-01 -0.0648 0.0576 0.306 CD8T L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.12e-01 0.0208 0.056 0.306 CD8T L1
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 9.74e-02 0.109 0.0653 0.306 CD8T L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 8.06e-01 -0.0203 0.0825 0.306 CD8T L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 1.01e-01 0.141 0.0856 0.304 DC L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 1.20e-01 0.158 0.101 0.304 DC L1
ENSG00000134644 PUM1 -526851 sc-eQTL 6.68e-02 0.146 0.0793 0.304 DC L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.40e-01 -0.0189 0.0571 0.304 DC L1
ENSG00000168528 SERINC2 -870425 sc-eQTL 6.86e-01 0.0381 0.0941 0.304 DC L1
ENSG00000284543 LINC01226 -967086 sc-eQTL 5.50e-01 0.0373 0.0623 0.304 DC L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 6.32e-01 0.0433 0.0902 0.304 DC L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 8.49e-01 0.0128 0.067 0.306 Mono L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.53e-01 0.00492 0.0831 0.306 Mono L1
ENSG00000134644 PUM1 -526851 sc-eQTL 8.42e-01 -0.0106 0.0533 0.306 Mono L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.25e-01 -0.0751 0.0487 0.306 Mono L1
ENSG00000162512 SDC3 -369618 sc-eQTL 6.56e-01 0.042 0.0941 0.306 Mono L1
ENSG00000168528 SERINC2 -870425 sc-eQTL 8.88e-01 -0.0142 0.101 0.306 Mono L1
ENSG00000284543 LINC01226 -967086 sc-eQTL 2.47e-01 0.103 0.0887 0.306 Mono L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 4.45e-01 -0.0595 0.0777 0.306 Mono L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.22e-01 -0.095 0.0958 0.303 NK L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 8.07e-01 0.0161 0.0657 0.303 NK L1
ENSG00000134644 PUM1 -526851 sc-eQTL 2.12e-01 -0.0859 0.0687 0.303 NK L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.17e-03 -0.212 0.078 0.303 NK L1
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.21e-02 0.19 0.0882 0.303 NK L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.39e-01 -0.0275 0.0823 0.303 NK L1
ENSG00000060688 SNRNP40 -757648 sc-eQTL 4.77e-01 -0.0501 0.0703 0.306 Other_T L1
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.41e-01 -0.00553 0.0752 0.306 Other_T L1
ENSG00000134644 PUM1 -526851 sc-eQTL 8.37e-01 -0.0139 0.0676 0.306 Other_T L1
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.33e-01 0.0117 0.0554 0.306 Other_T L1
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 6.07e-01 0.0468 0.0907 0.306 Other_T L1
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.94e-01 -0.0248 0.0945 0.306 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.87e-01 0.0969 0.112 0.316 B_Activated L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.61e-02 0.215 0.112 0.316 B_Activated L2
ENSG00000134644 PUM1 -526851 sc-eQTL 2.36e-01 0.124 0.104 0.316 B_Activated L2
ENSG00000162510 MATN1 -184445 sc-eQTL 5.12e-01 0.0601 0.0915 0.316 B_Activated L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.13e-01 -0.101 0.0635 0.316 B_Activated L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 1.41e-01 0.152 0.103 0.316 B_Activated L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.82e-01 -0.0253 0.0913 0.316 B_Activated L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 9.50e-01 0.00669 0.106 0.305 B_Intermediate L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 1.17e-02 -0.221 0.0869 0.305 B_Intermediate L2
ENSG00000134644 PUM1 -526851 sc-eQTL 4.21e-01 0.0671 0.0831 0.305 B_Intermediate L2
ENSG00000162510 MATN1 -184445 sc-eQTL 4.76e-01 -0.0619 0.0865 0.305 B_Intermediate L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 5.98e-02 -0.0998 0.0527 0.305 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 8.82e-01 -0.0111 0.0746 0.305 B_Intermediate L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.49e-01 0.0268 0.0835 0.305 B_Intermediate L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.95e-02 -0.221 0.101 0.306 B_Memory L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.41e-01 -0.0574 0.0937 0.306 B_Memory L2
ENSG00000134644 PUM1 -526851 sc-eQTL 9.24e-01 0.00781 0.0816 0.306 B_Memory L2
ENSG00000162510 MATN1 -184445 sc-eQTL 3.12e-01 0.079 0.0779 0.306 B_Memory L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 9.82e-02 -0.114 0.0688 0.306 B_Memory L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 9.97e-01 -0.000259 0.0792 0.306 B_Memory L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 1.50e-01 -0.133 0.0923 0.306 B_Memory L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 1.06e-01 -0.152 0.0933 0.306 B_Naive1 L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 7.36e-01 0.0274 0.0811 0.306 B_Naive1 L2
ENSG00000134644 PUM1 -526851 sc-eQTL 2.51e-01 0.0821 0.0713 0.306 B_Naive1 L2
ENSG00000162510 MATN1 -184445 sc-eQTL 8.83e-01 0.0107 0.0726 0.306 B_Naive1 L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.42e-02 -0.0863 0.0481 0.306 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.47e-01 0.0599 0.0635 0.306 B_Naive1 L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 1.62e-02 -0.188 0.0776 0.306 B_Naive1 L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.57e-01 0.114 0.101 0.305 B_Naive2 L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 7.23e-01 -0.0296 0.0833 0.305 B_Naive2 L2
ENSG00000134644 PUM1 -526851 sc-eQTL 2.54e-01 0.0929 0.0812 0.305 B_Naive2 L2
ENSG00000162510 MATN1 -184445 sc-eQTL 2.44e-01 -0.0911 0.078 0.305 B_Naive2 L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 5.45e-01 -0.0322 0.0531 0.305 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 6.83e-01 -0.0316 0.0773 0.305 B_Naive2 L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 4.62e-01 -0.0615 0.0835 0.305 B_Naive2 L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 1.96e-01 0.131 0.101 0.311 CD4_CTL L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 3.80e-01 0.0872 0.0991 0.311 CD4_CTL L2
ENSG00000134644 PUM1 -526851 sc-eQTL 4.23e-01 -0.0781 0.0972 0.311 CD4_CTL L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 5.78e-01 0.0483 0.0867 0.311 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.49e-01 -0.0889 0.0947 0.311 CD4_CTL L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.60e-01 -0.0489 0.0837 0.311 CD4_CTL L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 8.18e-01 -0.0178 0.0771 0.306 CD4_Naive L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 1.82e-02 -0.161 0.0675 0.306 CD4_Naive L2
ENSG00000134644 PUM1 -526851 sc-eQTL 7.93e-02 -0.0956 0.0542 0.306 CD4_Naive L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 9.33e-01 -0.00493 0.0585 0.306 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 8.45e-01 0.0116 0.0594 0.306 CD4_Naive L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 8.09e-01 -0.0165 0.0682 0.306 CD4_Naive L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 8.18e-01 -0.0226 0.0982 0.306 CD4_TCM L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 3.71e-01 0.0708 0.079 0.306 CD4_TCM L2
ENSG00000134644 PUM1 -526851 sc-eQTL 7.55e-01 -0.0219 0.0701 0.306 CD4_TCM L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.51e-01 0.0109 0.0581 0.306 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 7.39e-01 -0.0246 0.0737 0.306 CD4_TCM L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 2.25e-01 -0.0997 0.0819 0.306 CD4_TCM L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.97e-01 -0.101 0.097 0.306 CD4_TEM L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 7.53e-01 -0.0292 0.0927 0.306 CD4_TEM L2
ENSG00000134644 PUM1 -526851 sc-eQTL 5.25e-01 0.0491 0.0771 0.306 CD4_TEM L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 5.88e-01 -0.0423 0.078 0.306 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.89e-02 -0.188 0.0904 0.306 CD4_TEM L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 4.25e-01 -0.0719 0.0899 0.306 CD4_TEM L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 6.93e-01 -0.0422 0.107 0.306 CD8_CTL L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 8.66e-01 0.0138 0.0819 0.306 CD8_CTL L2
ENSG00000134644 PUM1 -526851 sc-eQTL 5.99e-01 -0.0418 0.0795 0.306 CD8_CTL L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 6.52e-01 -0.0397 0.088 0.306 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 9.82e-01 0.00208 0.0926 0.306 CD8_CTL L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 3.10e-01 -0.0884 0.0869 0.306 CD8_CTL L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 1.78e-01 -0.13 0.0962 0.306 CD8_Naive L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 8.52e-01 0.0155 0.0833 0.306 CD8_Naive L2
ENSG00000134644 PUM1 -526851 sc-eQTL 5.92e-01 -0.0359 0.067 0.306 CD8_Naive L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 9.70e-01 0.0024 0.0643 0.306 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 4.85e-02 0.158 0.0795 0.306 CD8_Naive L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 6.89e-01 -0.035 0.0873 0.306 CD8_Naive L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 9.16e-02 0.181 0.107 0.303 CD8_TCM L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.66e-01 0.0567 0.0987 0.303 CD8_TCM L2
ENSG00000134644 PUM1 -526851 sc-eQTL 4.81e-02 -0.183 0.0919 0.303 CD8_TCM L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 3.60e-01 -0.089 0.097 0.303 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 9.88e-01 -0.00139 0.09 0.303 CD8_TCM L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 1.67e-01 0.125 0.0905 0.303 CD8_TCM L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.16e-01 -0.102 0.102 0.308 CD8_TEM L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 2.38e-01 -0.115 0.0973 0.308 CD8_TEM L2
ENSG00000134644 PUM1 -526851 sc-eQTL 8.79e-01 0.0152 0.0998 0.308 CD8_TEM L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 6.01e-01 0.0491 0.0938 0.308 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 4.34e-01 0.0763 0.0972 0.308 CD8_TEM L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 2.26e-01 -0.107 0.0878 0.308 CD8_TEM L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 8.79e-01 0.0157 0.103 0.31 MAIT L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 7.59e-01 0.0281 0.0913 0.31 MAIT L2
ENSG00000134644 PUM1 -526851 sc-eQTL 6.64e-01 0.0381 0.0875 0.31 MAIT L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.28e-01 -0.0287 0.0826 0.31 MAIT L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 1.46e-01 0.133 0.0915 0.31 MAIT L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 3.52e-01 -0.0883 0.0946 0.31 MAIT L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 7.41e-01 -0.0353 0.107 0.298 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 4.86e-01 0.0628 0.09 0.298 NK_CD56bright L2
ENSG00000134644 PUM1 -526851 sc-eQTL 3.31e-01 0.0919 0.0944 0.298 NK_CD56bright L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.84e-02 -0.164 0.0926 0.298 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 4.76e-01 0.0668 0.0937 0.298 NK_CD56bright L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.08e-01 0.0613 0.0923 0.298 NK_CD56bright L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.90e-01 -0.0886 0.103 0.302 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.71e-01 -0.00278 0.0762 0.302 NK_CD56dim L2
ENSG00000134644 PUM1 -526851 sc-eQTL 2.09e-02 -0.18 0.0772 0.302 NK_CD56dim L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.16e-02 -0.209 0.0821 0.302 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.17e-02 0.223 0.103 0.302 NK_CD56dim L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 9.34e-01 0.00716 0.0861 0.302 NK_CD56dim L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.39e-01 -0.0659 0.107 0.304 NK_HLA L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.82e-01 -0.00218 0.0957 0.304 NK_HLA L2
ENSG00000134644 PUM1 -526851 sc-eQTL 3.71e-01 -0.0835 0.0931 0.304 NK_HLA L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 3.03e-02 -0.192 0.0879 0.304 NK_HLA L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 8.46e-01 0.0184 0.0947 0.304 NK_HLA L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.20e-01 -0.0328 0.0915 0.304 NK_HLA L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 7.97e-01 0.0253 0.0982 0.302 NK_cytokine L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 6.34e-01 0.0365 0.0766 0.302 NK_cytokine L2
ENSG00000134644 PUM1 -526851 sc-eQTL 8.92e-01 -0.0112 0.0829 0.302 NK_cytokine L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.98e-03 -0.237 0.0898 0.302 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 7.34e-01 0.0329 0.0967 0.302 NK_cytokine L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 2.57e-01 -0.102 0.0897 0.302 NK_cytokine L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 1.01e-01 -0.187 0.113 0.315 PB L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.55e-01 0.00749 0.133 0.315 PB L2
ENSG00000134644 PUM1 -526851 sc-eQTL 5.47e-01 0.0695 0.115 0.315 PB L2
ENSG00000162510 MATN1 -184445 sc-eQTL 4.14e-01 0.0878 0.107 0.315 PB L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.48e-01 -0.0148 0.0768 0.315 PB L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 1.11e-01 0.167 0.104 0.315 PB L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 6.26e-01 0.0546 0.112 0.315 PB L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.24e-01 -0.0481 0.0753 0.309 Pro_T L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.78e-01 0.0533 0.0956 0.309 Pro_T L2
ENSG00000134644 PUM1 -526851 sc-eQTL 6.45e-01 -0.0412 0.0892 0.309 Pro_T L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 6.00e-01 0.0336 0.064 0.309 Pro_T L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 1.62e-01 0.125 0.0891 0.309 Pro_T L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.97e-01 0.0436 0.0823 0.309 Pro_T L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 9.80e-02 0.165 0.0993 0.306 Treg L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.75e-01 -0.0542 0.0966 0.306 Treg L2
ENSG00000134644 PUM1 -526851 sc-eQTL 4.95e-01 -0.0528 0.0773 0.306 Treg L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 9.23e-01 0.00857 0.0886 0.306 Treg L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 3.72e-01 0.0807 0.0901 0.306 Treg L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 1.02e-01 -0.147 0.0896 0.306 Treg L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.44e-01 0.116 0.0992 0.295 cDC L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 7.21e-01 0.0386 0.108 0.295 cDC L2
ENSG00000134644 PUM1 -526851 sc-eQTL 7.65e-01 -0.0277 0.0926 0.295 cDC L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 2.39e-01 -0.0764 0.0647 0.295 cDC L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 4.17e-01 0.0676 0.0832 0.295 cDC L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 1.98e-01 0.105 0.0815 0.295 cDC L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.88e-01 0.0238 0.0882 0.295 cDC L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 6.23e-01 -0.0396 0.0803 0.306 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 6.22e-01 0.0442 0.0895 0.306 cMono_IL1B L2
ENSG00000134644 PUM1 -526851 sc-eQTL 7.75e-01 -0.0173 0.0606 0.306 cMono_IL1B L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 4.35e-02 -0.107 0.0527 0.306 cMono_IL1B L2
ENSG00000162512 SDC3 -369618 sc-eQTL 7.91e-01 0.0266 0.1 0.306 cMono_IL1B L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 8.79e-01 0.0155 0.101 0.306 cMono_IL1B L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 9.11e-01 0.01 0.0897 0.306 cMono_IL1B L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.91e-01 -0.045 0.0836 0.306 cMono_IL1B L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.71e-01 -0.0484 0.0854 0.306 cMono_S100A L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 4.77e-01 -0.0718 0.101 0.306 cMono_S100A L2
ENSG00000134644 PUM1 -526851 sc-eQTL 6.51e-01 -0.033 0.0729 0.306 cMono_S100A L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.77e-01 -0.0087 0.0561 0.306 cMono_S100A L2
ENSG00000162512 SDC3 -369618 sc-eQTL 1.86e-01 0.128 0.0965 0.306 cMono_S100A L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 4.79e-01 -0.0727 0.102 0.306 cMono_S100A L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 3.07e-01 0.0852 0.0831 0.306 cMono_S100A L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.62e-01 -0.0254 0.0836 0.306 cMono_S100A L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.33e-01 0.0767 0.123 0.3 gdT L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 3.49e-03 -0.305 0.103 0.3 gdT L2
ENSG00000134644 PUM1 -526851 sc-eQTL 8.88e-01 0.0153 0.109 0.3 gdT L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.11e-01 -0.0283 0.118 0.3 gdT L2
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 6.16e-02 0.203 0.108 0.3 gdT L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.92e-01 0.0568 0.106 0.3 gdT L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.04e-01 0.0958 0.093 0.302 intMono L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 2.51e-01 -0.115 0.0999 0.302 intMono L2
ENSG00000134644 PUM1 -526851 sc-eQTL 2.52e-01 -0.0973 0.0848 0.302 intMono L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 6.51e-01 -0.0302 0.0667 0.302 intMono L2
ENSG00000162512 SDC3 -369618 sc-eQTL 5.99e-01 -0.0481 0.0913 0.302 intMono L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 9.78e-01 -0.00262 0.0956 0.302 intMono L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 3.41e-01 0.0863 0.0904 0.302 intMono L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 2.77e-01 0.0985 0.0904 0.302 intMono L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 4.21e-02 0.178 0.087 0.305 ncMono L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.96e-01 0.000515 0.0937 0.305 ncMono L2
ENSG00000134644 PUM1 -526851 sc-eQTL 7.29e-01 -0.0266 0.0765 0.305 ncMono L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 8.19e-01 0.0159 0.0695 0.305 ncMono L2
ENSG00000162512 SDC3 -369618 sc-eQTL 3.53e-01 0.0724 0.0778 0.305 ncMono L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 5.75e-01 0.0477 0.085 0.305 ncMono L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 6.56e-02 0.156 0.0843 0.305 ncMono L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 3.51e-01 -0.0823 0.0879 0.305 ncMono L2
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.18e-02 0.221 0.0955 0.299 pDC L2
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 6.09e-02 0.199 0.105 0.299 pDC L2
ENSG00000134644 PUM1 -526851 sc-eQTL 3.37e-02 0.187 0.0871 0.299 pDC L2
ENSG00000162511 LAPTM5 -218634 sc-eQTL 4.02e-01 -0.0689 0.082 0.299 pDC L2
ENSG00000168528 SERINC2 -870425 sc-eQTL 2.07e-01 0.126 0.0991 0.299 pDC L2
ENSG00000284543 LINC01226 -967086 sc-eQTL 4.24e-01 0.0619 0.0772 0.299 pDC L2
ENSG00000287510 AL137857.1 -192553 sc-eQTL 2.55e-01 -0.104 0.0906 0.299 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -757648 sc-eQTL 5.26e-01 -0.0637 0.1 0.306 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 1.20e-01 -0.129 0.083 0.306 B_Memory LOneK1K
ENSG00000134644 PUM1 -526851 sc-eQTL 3.07e-01 0.0755 0.0738 0.306 B_Memory LOneK1K
ENSG00000162510 MATN1 -184445 sc-eQTL 5.40e-01 -0.0517 0.0842 0.306 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -218634 sc-eQTL 7.15e-02 -0.0952 0.0526 0.306 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 9.20e-01 -0.00708 0.0701 0.306 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -192553 sc-eQTL 9.64e-01 -0.00344 0.0764 0.306 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.70e-01 -0.0831 0.0924 0.306 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 6.66e-01 -0.0316 0.0732 0.306 B_Naive LOneK1K
ENSG00000134644 PUM1 -526851 sc-eQTL 2.23e-01 0.0843 0.069 0.306 B_Naive LOneK1K
ENSG00000162510 MATN1 -184445 sc-eQTL 5.23e-01 -0.0426 0.0666 0.306 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.03e-01 -0.0765 0.0466 0.306 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 7.42e-01 0.02 0.0606 0.306 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -192553 sc-eQTL 1.16e-01 -0.113 0.0716 0.306 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -757648 sc-eQTL 4.99e-01 -0.0517 0.0763 0.306 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 9.54e-01 -0.00503 0.0865 0.306 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -526851 sc-eQTL 9.77e-01 -0.00161 0.0552 0.306 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.27e-01 -0.074 0.0483 0.306 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -369618 sc-eQTL 5.15e-01 0.0645 0.0989 0.306 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -870425 sc-eQTL 9.12e-01 -0.0113 0.102 0.306 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -967086 sc-eQTL 5.34e-01 0.052 0.0834 0.306 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -192553 sc-eQTL 5.27e-01 -0.0495 0.0781 0.306 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -757648 sc-eQTL 3.96e-02 0.172 0.0831 0.304 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 5.37e-01 -0.0568 0.0918 0.304 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -526851 sc-eQTL 7.22e-01 -0.0268 0.0752 0.304 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -218634 sc-eQTL 9.95e-01 0.000404 0.0602 0.304 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -369618 sc-eQTL 7.05e-01 -0.0334 0.0879 0.304 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -870425 sc-eQTL 8.44e-01 0.0179 0.0912 0.304 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -967086 sc-eQTL 1.21e-01 0.134 0.086 0.304 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -192553 sc-eQTL 7.80e-01 0.0243 0.0866 0.304 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -757648 sc-eQTL 2.31e-01 -0.116 0.0969 0.302 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -757842 sc-eQTL 8.50e-01 0.0126 0.0664 0.302 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -526851 sc-eQTL 9.73e-02 -0.12 0.0723 0.302 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -218634 sc-eQTL 1.01e-02 -0.208 0.0801 0.302 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -179364 sc-eQTL 4.79e-02 0.185 0.0929 0.302 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -192553 sc-eQTL 8.32e-01 -0.0171 0.081 0.302 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000237329 AL356320.2 -497594 eQTL 0.0123 0.091 0.0363 0.00204 0.0 0.323

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000237329 AL356320.2 -497594 7.57e-07 3.77e-07 1e-07 3.19e-07 9.26e-08 1.64e-07 4.42e-07 1.21e-07 3.66e-07 2.14e-07 4.64e-07 3.27e-07 5.81e-07 1.01e-07 1.5e-07 2.05e-07 2.25e-07 3.67e-07 1.7e-07 1.24e-07 1.86e-07 3.15e-07 3.07e-07 1.27e-07 5.53e-07 2.39e-07 2.52e-07 2.18e-07 3e-07 4.1e-07 2.19e-07 7.4e-08 5.77e-08 1.25e-07 2.61e-07 8.75e-08 9.11e-08 8.21e-08 4.9e-08 5.54e-08 8.02e-08 3.66e-07 2.67e-08 1.75e-08 1.16e-07 1.88e-08 8.24e-08 3.35e-09 5.19e-08