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Genes within 1Mb (chr1:30538436:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.72e-01 -0.129 0.094 0.78 B L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 9.12e-01 0.00836 0.0756 0.78 B L1
ENSG00000134644 PUM1 -527555 sc-eQTL 3.93e-01 0.0542 0.0634 0.78 B L1
ENSG00000162510 MATN1 -185149 sc-eQTL 7.31e-01 -0.0229 0.0667 0.78 B L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.12e-01 -0.0529 0.0521 0.78 B L1
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.70e-01 0.0179 0.0612 0.78 B L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.90e-01 -0.0289 0.0724 0.78 B L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 5.65e-01 0.0463 0.0803 0.78 CD4T L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 1.80e-01 -0.084 0.0625 0.78 CD4T L1
ENSG00000134644 PUM1 -527555 sc-eQTL 9.27e-01 -0.00516 0.0559 0.78 CD4T L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.69e-01 0.0557 0.0618 0.78 CD4T L1
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.36e-02 -0.0988 0.055 0.78 CD4T L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 4.96e-01 -0.0452 0.0663 0.78 CD4T L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 2.80e-01 -0.113 0.105 0.78 CD8T L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.07e-01 -0.036 0.0699 0.78 CD8T L1
ENSG00000134644 PUM1 -527555 sc-eQTL 4.01e-01 -0.0517 0.0615 0.78 CD8T L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 9.48e-01 0.00391 0.0598 0.78 CD8T L1
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 9.65e-01 -0.00308 0.0701 0.78 CD8T L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 2.01e-01 -0.113 0.0877 0.78 CD8T L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 5.51e-01 0.0565 0.0946 0.782 DC L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.01e-01 -0.0942 0.112 0.782 DC L1
ENSG00000134644 PUM1 -527555 sc-eQTL 3.18e-01 0.0876 0.0876 0.782 DC L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.89e-01 0.0251 0.0627 0.782 DC L1
ENSG00000168528 SERINC2 -871129 sc-eQTL 8.97e-02 0.175 0.103 0.782 DC L1
ENSG00000284543 LINC01226 -967790 sc-eQTL 2.86e-01 0.073 0.0683 0.782 DC L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 2.54e-01 0.113 0.0988 0.782 DC L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 5.44e-01 0.0443 0.073 0.78 Mono L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.11e-01 -0.0746 0.0905 0.78 Mono L1
ENSG00000134644 PUM1 -527555 sc-eQTL 6.21e-01 0.0288 0.0581 0.78 Mono L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 7.84e-01 0.0146 0.0534 0.78 Mono L1
ENSG00000162512 SDC3 -370322 sc-eQTL 1.81e-01 -0.137 0.102 0.78 Mono L1
ENSG00000168528 SERINC2 -871129 sc-eQTL 6.73e-01 -0.0465 0.11 0.78 Mono L1
ENSG00000284543 LINC01226 -967790 sc-eQTL 5.25e-02 0.188 0.0962 0.78 Mono L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.11e-01 -0.135 0.0843 0.78 Mono L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.91e-01 0.00115 0.101 0.779 NK L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 2.42e-01 0.0812 0.0692 0.779 NK L1
ENSG00000134644 PUM1 -527555 sc-eQTL 5.31e-01 -0.0457 0.0728 0.779 NK L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.47e-02 -0.176 0.0829 0.779 NK L1
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 2.53e-01 0.108 0.0939 0.779 NK L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 9.10e-01 -0.00988 0.087 0.779 NK L1
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.92e-01 -0.101 0.0774 0.78 Other_T L1
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 9.41e-01 -0.00611 0.0831 0.78 Other_T L1
ENSG00000134644 PUM1 -527555 sc-eQTL 5.48e-01 0.0449 0.0746 0.78 Other_T L1
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.41e-01 0.0123 0.0612 0.78 Other_T L1
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 9.83e-01 -0.00219 0.1 0.78 Other_T L1
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.71e-01 -0.0444 0.104 0.78 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.43e-01 0.176 0.12 0.773 B_Activated L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 5.80e-01 0.0674 0.122 0.773 B_Activated L2
ENSG00000134644 PUM1 -527555 sc-eQTL 4.41e-01 0.0871 0.113 0.773 B_Activated L2
ENSG00000162510 MATN1 -185149 sc-eQTL 9.18e-01 -0.0102 0.0988 0.773 B_Activated L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.83e-01 -0.0281 0.0688 0.773 B_Activated L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 6.25e-01 0.0543 0.111 0.773 B_Activated L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.50e-01 -0.141 0.0978 0.773 B_Activated L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 7.67e-01 -0.0353 0.119 0.781 B_Intermediate L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 8.72e-01 0.016 0.0992 0.781 B_Intermediate L2
ENSG00000134644 PUM1 -527555 sc-eQTL 6.44e-01 0.0433 0.0935 0.781 B_Intermediate L2
ENSG00000162510 MATN1 -185149 sc-eQTL 1.58e-01 -0.137 0.0969 0.781 B_Intermediate L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 7.77e-01 0.0169 0.0598 0.781 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.61e-01 -0.0256 0.0839 0.781 B_Intermediate L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.66e-01 0.0848 0.0937 0.781 B_Intermediate L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 2.58e-01 -0.128 0.113 0.78 B_Memory L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.42e-01 -0.0802 0.104 0.78 B_Memory L2
ENSG00000134644 PUM1 -527555 sc-eQTL 4.06e-01 0.0755 0.0906 0.78 B_Memory L2
ENSG00000162510 MATN1 -185149 sc-eQTL 2.18e-02 0.198 0.0857 0.78 B_Memory L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.55e-01 0.0344 0.0769 0.78 B_Memory L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 5.82e-01 0.0485 0.088 0.78 B_Memory L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.59e-01 -0.0945 0.103 0.78 B_Memory L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 8.40e-01 -0.0209 0.104 0.78 B_Naive1 L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.04e-01 0.0465 0.0894 0.78 B_Naive1 L2
ENSG00000134644 PUM1 -527555 sc-eQTL 6.45e-01 -0.0364 0.0789 0.78 B_Naive1 L2
ENSG00000162510 MATN1 -185149 sc-eQTL 8.56e-01 0.0145 0.0801 0.78 B_Naive1 L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.61e-01 -0.00939 0.0535 0.78 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 9.25e-01 -0.00658 0.0702 0.78 B_Naive1 L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 9.87e-02 -0.143 0.0862 0.78 B_Naive1 L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.54e-01 0.00649 0.113 0.779 B_Naive2 L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.42e-01 -0.0717 0.0932 0.779 B_Naive2 L2
ENSG00000134644 PUM1 -527555 sc-eQTL 2.00e-01 0.117 0.0909 0.779 B_Naive2 L2
ENSG00000162510 MATN1 -185149 sc-eQTL 2.68e-01 -0.097 0.0874 0.779 B_Naive2 L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.96e-01 0.0506 0.0594 0.779 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.24e-01 0.0307 0.0867 0.779 B_Naive2 L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.98e-01 0.0363 0.0936 0.779 B_Naive2 L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 3.30e-01 0.108 0.111 0.786 CD4_CTL L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.32e-01 0.0858 0.109 0.786 CD4_CTL L2
ENSG00000134644 PUM1 -527555 sc-eQTL 6.58e-02 0.197 0.106 0.786 CD4_CTL L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.16e-01 -0.0621 0.0954 0.786 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.88e-01 0.0281 0.104 0.786 CD4_CTL L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.38e-01 0.0308 0.0922 0.786 CD4_CTL L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 6.40e-01 0.0395 0.0844 0.78 CD4_Naive L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 1.83e-01 -0.0995 0.0745 0.78 CD4_Naive L2
ENSG00000134644 PUM1 -527555 sc-eQTL 1.78e-01 -0.0804 0.0595 0.78 CD4_Naive L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.49e-01 0.0122 0.064 0.78 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 2.55e-02 -0.144 0.0642 0.78 CD4_Naive L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.89e-01 0.0299 0.0746 0.78 CD4_Naive L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.53e-01 0.00622 0.105 0.78 CD4_TCM L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 1.82e-01 -0.113 0.0846 0.78 CD4_TCM L2
ENSG00000134644 PUM1 -527555 sc-eQTL 8.67e-01 0.0126 0.0752 0.78 CD4_TCM L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 4.62e-01 0.0459 0.0623 0.78 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 6.94e-01 -0.0312 0.0791 0.78 CD4_TCM L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.29e-01 -0.134 0.0877 0.78 CD4_TCM L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 5.91e-01 -0.057 0.106 0.78 CD4_TEM L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 7.89e-02 0.177 0.1 0.78 CD4_TEM L2
ENSG00000134644 PUM1 -527555 sc-eQTL 5.21e-01 0.0541 0.084 0.78 CD4_TEM L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.31e-01 -0.0409 0.085 0.78 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 1.48e-01 -0.144 0.099 0.78 CD4_TEM L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.96e-01 0.0254 0.0981 0.78 CD4_TEM L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 8.92e-01 -0.0155 0.115 0.78 CD8_CTL L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 8.24e-01 -0.0195 0.0879 0.78 CD8_CTL L2
ENSG00000134644 PUM1 -527555 sc-eQTL 8.77e-01 -0.0132 0.0853 0.78 CD8_CTL L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.08e-01 -0.0485 0.0944 0.78 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 2.61e-01 -0.112 0.099 0.78 CD8_CTL L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.16e-01 -0.146 0.0929 0.78 CD8_CTL L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 8.98e-01 -0.0134 0.105 0.78 CD8_Naive L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.23e-01 -0.0444 0.0901 0.78 CD8_Naive L2
ENSG00000134644 PUM1 -527555 sc-eQTL 9.72e-01 0.00257 0.0725 0.78 CD8_Naive L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 1.44e-01 0.101 0.0692 0.78 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 6.77e-01 0.0361 0.0867 0.78 CD8_Naive L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 5.45e-01 -0.0572 0.0944 0.78 CD8_Naive L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.45e-01 -0.00821 0.118 0.78 CD8_TCM L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 7.01e-01 -0.0415 0.108 0.78 CD8_TCM L2
ENSG00000134644 PUM1 -527555 sc-eQTL 1.05e-02 -0.258 0.1 0.78 CD8_TCM L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 2.91e-01 -0.112 0.106 0.78 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 3.21e-01 -0.0979 0.0983 0.78 CD8_TCM L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 8.52e-01 -0.0186 0.0996 0.78 CD8_TCM L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 7.29e-01 -0.0396 0.114 0.79 CD8_TEM L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 5.10e-01 -0.0723 0.109 0.79 CD8_TEM L2
ENSG00000134644 PUM1 -527555 sc-eQTL 3.64e-01 0.102 0.112 0.79 CD8_TEM L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.59e-01 -0.0616 0.105 0.79 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.66e-02 0.193 0.108 0.79 CD8_TEM L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.45e-01 -0.144 0.0984 0.79 CD8_TEM L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.69e-01 -0.157 0.114 0.784 MAIT L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 7.73e-01 0.0292 0.101 0.784 MAIT L2
ENSG00000134644 PUM1 -527555 sc-eQTL 9.49e-01 0.00621 0.0971 0.784 MAIT L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.63e-01 0.0158 0.0915 0.784 MAIT L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 5.91e-01 0.0549 0.102 0.784 MAIT L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 2.23e-01 -0.128 0.105 0.784 MAIT L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.09e-01 0.184 0.114 0.78 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 9.13e-01 -0.0106 0.0972 0.78 NK_CD56bright L2
ENSG00000134644 PUM1 -527555 sc-eQTL 8.17e-01 -0.0236 0.102 0.78 NK_CD56bright L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 4.95e-01 -0.0687 0.101 0.78 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 4.24e-01 -0.0809 0.101 0.78 NK_CD56bright L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 8.43e-01 0.0198 0.0997 0.78 NK_CD56bright L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.80e-01 -0.0027 0.106 0.78 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 2.27e-01 0.0951 0.0784 0.78 NK_CD56dim L2
ENSG00000134644 PUM1 -527555 sc-eQTL 4.42e-02 -0.162 0.08 0.78 NK_CD56dim L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.61e-02 -0.164 0.0854 0.78 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 1.04e-01 0.175 0.107 0.78 NK_CD56dim L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 9.84e-01 -0.00176 0.089 0.78 NK_CD56dim L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 8.61e-01 0.0201 0.115 0.785 NK_HLA L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.04e-02 -0.192 0.102 0.785 NK_HLA L2
ENSG00000134644 PUM1 -527555 sc-eQTL 2.66e-01 0.111 0.0996 0.785 NK_HLA L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 1.70e-01 -0.131 0.0949 0.785 NK_HLA L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 1.26e-01 0.155 0.101 0.785 NK_HLA L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.88e-01 -0.0847 0.0979 0.785 NK_HLA L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.09e-01 -0.0119 0.104 0.78 NK_cytokine L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 2.73e-01 0.0892 0.0812 0.78 NK_cytokine L2
ENSG00000134644 PUM1 -527555 sc-eQTL 6.42e-01 -0.041 0.088 0.78 NK_cytokine L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 1.25e-02 -0.24 0.0955 0.78 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 5.86e-01 -0.056 0.103 0.78 NK_cytokine L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.38e-01 -0.0916 0.0954 0.78 NK_cytokine L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 3.10e-01 -0.122 0.119 0.789 PB L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 7.81e-02 -0.244 0.137 0.789 PB L2
ENSG00000134644 PUM1 -527555 sc-eQTL 9.48e-01 -0.00786 0.121 0.789 PB L2
ENSG00000162510 MATN1 -185149 sc-eQTL 6.69e-01 0.0482 0.112 0.789 PB L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.23e-01 0.0514 0.0803 0.789 PB L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 4.23e-01 0.0883 0.11 0.789 PB L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.79e-01 -0.033 0.117 0.789 PB L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 6.68e-01 -0.0355 0.0827 0.778 Pro_T L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 5.15e-01 0.0685 0.105 0.778 Pro_T L2
ENSG00000134644 PUM1 -527555 sc-eQTL 1.23e-01 -0.151 0.0974 0.778 Pro_T L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 2.07e-01 -0.0886 0.07 0.778 Pro_T L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 6.37e-01 -0.0464 0.0982 0.778 Pro_T L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.16e-01 -0.0454 0.0903 0.778 Pro_T L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 7.59e-02 -0.195 0.109 0.78 Treg L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 2.86e-01 -0.113 0.106 0.78 Treg L2
ENSG00000134644 PUM1 -527555 sc-eQTL 2.27e-01 0.103 0.0848 0.78 Treg L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 9.07e-02 0.165 0.0968 0.78 Treg L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.63e-01 0.03 0.0993 0.78 Treg L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.96e-01 -0.0257 0.0992 0.78 Treg L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 6.86e-01 0.0447 0.11 0.783 cDC L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 9.80e-01 0.00296 0.12 0.783 cDC L2
ENSG00000134644 PUM1 -527555 sc-eQTL 9.95e-01 -0.000654 0.103 0.783 cDC L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.94e-01 -0.0096 0.072 0.783 cDC L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 4.27e-01 0.0735 0.0923 0.783 cDC L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 7.73e-01 0.0262 0.0908 0.783 cDC L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.36e-01 0.0329 0.0977 0.783 cDC L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 4.90e-01 0.0605 0.0875 0.78 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 9.53e-01 0.00571 0.0978 0.78 cMono_IL1B L2
ENSG00000134644 PUM1 -527555 sc-eQTL 5.76e-01 0.037 0.0661 0.78 cMono_IL1B L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 8.73e-01 -0.00932 0.0581 0.78 cMono_IL1B L2
ENSG00000162512 SDC3 -370322 sc-eQTL 6.34e-02 -0.203 0.109 0.78 cMono_IL1B L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 5.66e-01 -0.0636 0.111 0.78 cMono_IL1B L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 5.82e-01 0.0539 0.0978 0.78 cMono_IL1B L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 2.49e-01 -0.105 0.091 0.78 cMono_IL1B L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.06e-01 0.0109 0.092 0.78 cMono_S100A L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.90e-01 -0.0435 0.109 0.78 cMono_S100A L2
ENSG00000134644 PUM1 -527555 sc-eQTL 6.25e-01 -0.0385 0.0785 0.78 cMono_S100A L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.21e-01 0.0387 0.0603 0.78 cMono_S100A L2
ENSG00000162512 SDC3 -370322 sc-eQTL 4.79e-01 0.0738 0.104 0.78 cMono_S100A L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 9.07e-01 0.0129 0.11 0.78 cMono_S100A L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 5.94e-04 0.304 0.0872 0.78 cMono_S100A L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.19e-01 -0.0898 0.0898 0.78 cMono_S100A L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 5.89e-01 0.0767 0.142 0.788 gdT L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 6.47e-01 -0.0558 0.122 0.788 gdT L2
ENSG00000134644 PUM1 -527555 sc-eQTL 7.72e-01 0.0364 0.125 0.788 gdT L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.92e-01 0.0542 0.136 0.788 gdT L2
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 8.55e-01 0.0231 0.126 0.788 gdT L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.02e-01 -0.0637 0.122 0.788 gdT L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 2.61e-01 0.116 0.103 0.78 intMono L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 1.20e-01 -0.172 0.11 0.78 intMono L2
ENSG00000134644 PUM1 -527555 sc-eQTL 8.19e-03 -0.247 0.0926 0.78 intMono L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.06e-01 -0.0757 0.0737 0.78 intMono L2
ENSG00000162512 SDC3 -370322 sc-eQTL 3.53e-01 -0.0941 0.101 0.78 intMono L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 3.51e-01 -0.099 0.106 0.78 intMono L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 4.33e-01 0.0788 0.1 0.78 intMono L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 3.83e-01 -0.0876 0.1 0.78 intMono L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 4.34e-01 0.0775 0.0987 0.787 ncMono L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 7.24e-01 -0.0373 0.105 0.787 ncMono L2
ENSG00000134644 PUM1 -527555 sc-eQTL 4.59e-01 -0.0639 0.086 0.787 ncMono L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 1.89e-01 0.103 0.0779 0.787 ncMono L2
ENSG00000162512 SDC3 -370322 sc-eQTL 8.59e-01 -0.0156 0.0877 0.787 ncMono L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 3.38e-01 -0.0917 0.0955 0.787 ncMono L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 1.48e-01 0.138 0.0951 0.787 ncMono L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 7.22e-01 -0.0354 0.0991 0.787 ncMono L2
ENSG00000060688 SNRNP40 -758352 sc-eQTL 3.26e-01 0.113 0.115 0.794 pDC L2
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 4.03e-01 0.106 0.126 0.794 pDC L2
ENSG00000134644 PUM1 -527555 sc-eQTL 3.08e-02 0.225 0.103 0.794 pDC L2
ENSG00000162511 LAPTM5 -219338 sc-eQTL 5.18e-01 -0.063 0.0973 0.794 pDC L2
ENSG00000168528 SERINC2 -871129 sc-eQTL 1.13e-01 0.187 0.117 0.794 pDC L2
ENSG00000284543 LINC01226 -967790 sc-eQTL 4.27e-01 0.0729 0.0915 0.794 pDC L2
ENSG00000287510 AL137857.1 -193257 sc-eQTL 6.61e-02 -0.197 0.107 0.794 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -758352 sc-eQTL 6.99e-01 0.0435 0.112 0.78 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 8.77e-01 -0.0145 0.0934 0.78 B_Memory LOneK1K
ENSG00000134644 PUM1 -527555 sc-eQTL 2.03e-01 0.105 0.0825 0.78 B_Memory LOneK1K
ENSG00000162510 MATN1 -185149 sc-eQTL 4.45e-01 -0.0722 0.0943 0.78 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -219338 sc-eQTL 7.32e-01 -0.0204 0.0593 0.78 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 8.25e-01 -0.0174 0.0785 0.78 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -193257 sc-eQTL 9.37e-01 -0.00677 0.0855 0.78 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -758352 sc-eQTL 9.77e-01 0.00289 0.102 0.78 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 8.79e-01 0.0123 0.0807 0.78 B_Naive LOneK1K
ENSG00000134644 PUM1 -527555 sc-eQTL 2.71e-01 0.084 0.0761 0.78 B_Naive LOneK1K
ENSG00000162510 MATN1 -185149 sc-eQTL 5.19e-01 -0.0475 0.0734 0.78 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.92e-01 0.0205 0.0517 0.78 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 7.05e-01 -0.0254 0.0668 0.78 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -193257 sc-eQTL 4.02e-01 -0.0665 0.0793 0.78 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -758352 sc-eQTL 7.24e-01 0.0295 0.0834 0.78 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 8.86e-01 -0.0136 0.0944 0.78 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -527555 sc-eQTL 5.80e-01 0.0334 0.0602 0.78 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -219338 sc-eQTL 9.36e-01 0.00424 0.053 0.78 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -370322 sc-eQTL 2.40e-01 -0.127 0.108 0.78 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -871129 sc-eQTL 7.35e-01 -0.0377 0.111 0.78 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -967790 sc-eQTL 5.70e-02 0.173 0.0903 0.78 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -193257 sc-eQTL 1.94e-01 -0.111 0.085 0.78 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -758352 sc-eQTL 1.82e-01 0.123 0.0918 0.778 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 5.40e-02 -0.194 0.1 0.778 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -527555 sc-eQTL 2.69e-01 -0.0914 0.0824 0.778 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -219338 sc-eQTL 6.24e-01 0.0324 0.0661 0.778 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -370322 sc-eQTL 2.15e-01 -0.12 0.0962 0.778 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -871129 sc-eQTL 4.35e-01 -0.0782 0.1 0.778 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -967790 sc-eQTL 2.81e-01 0.102 0.0947 0.778 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -193257 sc-eQTL 4.39e-01 -0.0736 0.095 0.778 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -758352 sc-eQTL 6.19e-01 -0.0506 0.102 0.78 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -758546 sc-eQTL 1.64e-01 0.0966 0.0692 0.78 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -527555 sc-eQTL 4.23e-01 -0.061 0.076 0.78 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -219338 sc-eQTL 3.51e-02 -0.179 0.0842 0.78 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -180068 sc-eQTL 2.26e-01 0.119 0.0978 0.78 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -193257 sc-eQTL 8.16e-01 -0.0197 0.0847 0.78 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000060688 \N -758352 3.1e-07 1.51e-07 6.86e-08 2.15e-07 1.01e-07 8.37e-08 2.16e-07 5.78e-08 1.75e-07 9.35e-08 1.69e-07 1.31e-07 2.24e-07 8e-08 5.62e-08 9.11e-08 4.63e-08 1.91e-07 7.39e-08 5.48e-08 1.18e-07 1.7e-07 1.64e-07 3.51e-08 2.09e-07 1.43e-07 1.23e-07 1.12e-07 1.37e-07 1.17e-07 1.26e-07 3.84e-08 3.74e-08 9.8e-08 3.97e-08 2.68e-08 5.35e-08 8.17e-08 6.39e-08 5.45e-08 5.96e-08 1.59e-07 4.17e-08 1.1e-08 3.87e-08 8.31e-09 7.83e-08 2e-09 4.98e-08
ENSG00000162510 \N -185149 3.06e-06 2.49e-06 5.8e-07 1.83e-06 8.74e-07 8.06e-07 2.16e-06 9.05e-07 2.27e-06 1.19e-06 2.56e-06 1.57e-06 3.69e-06 1.36e-06 8.99e-07 2.06e-06 1.59e-06 2.09e-06 1.6e-06 1.17e-06 1.39e-06 3.19e-06 2.67e-06 1.66e-06 3.92e-06 1.26e-06 1.53e-06 1.84e-06 3.06e-06 2.28e-06 1.93e-06 4.34e-07 6.49e-07 1.35e-06 1.45e-06 8.93e-07 8.57e-07 3.61e-07 1.37e-06 3.46e-07 4.03e-07 3.32e-06 5.92e-07 1.6e-07 3.99e-07 3.59e-07 8.55e-07 2.35e-07 2.87e-07