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Genes within 1Mb (chr1:30537566:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.31e-02 -0.148 0.0792 0.355 B L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 1.60e-01 0.0897 0.0636 0.355 B L1
ENSG00000134644 PUM1 -528425 sc-eQTL 2.55e-01 0.061 0.0535 0.355 B L1
ENSG00000162510 MATN1 -186019 sc-eQTL 8.19e-01 0.0129 0.0564 0.355 B L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 7.82e-01 0.0122 0.0442 0.355 B L1
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 5.15e-01 0.0337 0.0517 0.355 B L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 9.58e-01 -0.00319 0.0612 0.355 B L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 1.93e-01 0.0885 0.0678 0.355 CD4T L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.67e-01 -0.059 0.0531 0.355 CD4T L1
ENSG00000134644 PUM1 -528425 sc-eQTL 9.36e-01 0.0038 0.0474 0.355 CD4T L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 9.41e-01 -0.00388 0.0525 0.355 CD4T L1
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 1.11e-01 -0.0748 0.0467 0.355 CD4T L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 9.35e-01 0.00459 0.0563 0.355 CD4T L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.98e-01 -0.0116 0.0901 0.355 CD8T L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 3.75e-01 0.0532 0.0598 0.355 CD8T L1
ENSG00000134644 PUM1 -528425 sc-eQTL 2.72e-01 -0.0579 0.0526 0.355 CD8T L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 2.62e-01 0.0574 0.0511 0.355 CD8T L1
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.36e-01 0.0203 0.0601 0.355 CD8T L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 8.56e-01 -0.0137 0.0755 0.355 CD8T L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 1.25e-01 0.122 0.0794 0.358 DC L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 6.38e-01 0.0445 0.0945 0.358 DC L1
ENSG00000134644 PUM1 -528425 sc-eQTL 8.15e-01 -0.0173 0.074 0.358 DC L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.34e-01 -0.0252 0.0528 0.358 DC L1
ENSG00000168528 SERINC2 -871999 sc-eQTL 9.70e-01 0.00327 0.0872 0.358 DC L1
ENSG00000284543 LINC01226 -968660 sc-eQTL 5.79e-01 0.0321 0.0577 0.358 DC L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.19e-01 -0.0539 0.0835 0.358 DC L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.86e-01 0.00895 0.0626 0.355 Mono L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.54e-01 -0.0884 0.0774 0.355 Mono L1
ENSG00000134644 PUM1 -528425 sc-eQTL 4.66e-02 -0.0987 0.0493 0.355 Mono L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 2.56e-01 -0.052 0.0456 0.355 Mono L1
ENSG00000162512 SDC3 -371192 sc-eQTL 2.95e-01 0.0921 0.0877 0.355 Mono L1
ENSG00000168528 SERINC2 -871999 sc-eQTL 6.66e-02 -0.173 0.0936 0.355 Mono L1
ENSG00000284543 LINC01226 -968660 sc-eQTL 3.62e-01 0.0758 0.083 0.355 Mono L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.38e-01 -0.0448 0.0726 0.355 Mono L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.84e-01 -0.0611 0.087 0.354 NK L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 4.45e-01 0.0455 0.0595 0.354 NK L1
ENSG00000134644 PUM1 -528425 sc-eQTL 5.30e-01 -0.0393 0.0625 0.354 NK L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 1.20e-01 -0.112 0.0716 0.354 NK L1
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.23e-01 0.0986 0.0806 0.354 NK L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.31e-01 0.0258 0.0747 0.354 NK L1
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.58e-01 -0.0487 0.0655 0.355 Other_T L1
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 5.27e-01 0.0444 0.07 0.355 Other_T L1
ENSG00000134644 PUM1 -528425 sc-eQTL 1.25e-01 0.0965 0.0627 0.355 Other_T L1
ENSG00000162511 LAPTM5 -220208 sc-eQTL 4.83e-01 0.0362 0.0516 0.355 Other_T L1
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 9.47e-01 0.00562 0.0846 0.355 Other_T L1
ENSG00000287510 AL137857.1 -194127 sc-eQTL 8.55e-01 0.0162 0.0881 0.355 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.67e-01 0.0598 0.104 0.352 B_Activated L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.24e-01 0.128 0.105 0.352 B_Activated L2
ENSG00000134644 PUM1 -528425 sc-eQTL 3.12e-02 0.21 0.0965 0.352 B_Activated L2
ENSG00000162510 MATN1 -186019 sc-eQTL 5.36e-01 -0.0529 0.0854 0.352 B_Activated L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 8.58e-01 -0.0107 0.0596 0.352 B_Activated L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.06e-01 -0.122 0.0958 0.352 B_Activated L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 2.25e-01 -0.103 0.0848 0.352 B_Activated L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.02e-01 -0.0246 0.0978 0.354 B_Intermediate L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 8.35e-01 -0.017 0.0815 0.354 B_Intermediate L2
ENSG00000134644 PUM1 -528425 sc-eQTL 8.12e-01 -0.0183 0.0769 0.354 B_Intermediate L2
ENSG00000162510 MATN1 -186019 sc-eQTL 1.43e-01 -0.117 0.0796 0.354 B_Intermediate L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 5.55e-01 0.029 0.0491 0.354 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.83e-01 0.074 0.0687 0.354 B_Intermediate L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.04e-01 -0.0515 0.077 0.354 B_Intermediate L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.08e-02 -0.163 0.093 0.353 B_Memory L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 9.44e-01 0.00605 0.0863 0.353 B_Memory L2
ENSG00000134644 PUM1 -528425 sc-eQTL 1.01e-01 0.123 0.0746 0.353 B_Memory L2
ENSG00000162510 MATN1 -186019 sc-eQTL 1.38e-01 0.106 0.0715 0.353 B_Memory L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 1.53e-01 0.0909 0.0634 0.353 B_Memory L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 5.59e-01 -0.0426 0.0728 0.353 B_Memory L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 1.48e-01 -0.123 0.0849 0.353 B_Memory L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.34e-01 -0.0538 0.0863 0.355 B_Naive1 L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 1.94e-02 0.173 0.0736 0.355 B_Naive1 L2
ENSG00000134644 PUM1 -528425 sc-eQTL 7.98e-01 0.0168 0.0657 0.355 B_Naive1 L2
ENSG00000162510 MATN1 -186019 sc-eQTL 2.26e-01 0.0808 0.0665 0.355 B_Naive1 L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 3.42e-01 -0.0423 0.0445 0.355 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 6.00e-01 0.0307 0.0585 0.355 B_Naive1 L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 2.53e-01 -0.0826 0.0721 0.355 B_Naive1 L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 9.37e-01 0.00737 0.0924 0.354 B_Naive2 L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 4.89e-01 0.0528 0.0762 0.354 B_Naive2 L2
ENSG00000134644 PUM1 -528425 sc-eQTL 5.29e-01 0.047 0.0746 0.354 B_Naive2 L2
ENSG00000162510 MATN1 -186019 sc-eQTL 3.16e-01 -0.0719 0.0715 0.354 B_Naive2 L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.46e-01 0.0224 0.0486 0.354 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.19e-01 0.0255 0.0708 0.354 B_Naive2 L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 4.15e-01 0.0624 0.0764 0.354 B_Naive2 L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.87e-01 0.0372 0.0922 0.366 CD4_CTL L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.88e-01 0.0963 0.0905 0.366 CD4_CTL L2
ENSG00000134644 PUM1 -528425 sc-eQTL 2.17e-01 0.11 0.0886 0.366 CD4_CTL L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.34e-01 0.0378 0.0793 0.366 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 3.53e-01 -0.0806 0.0866 0.366 CD4_CTL L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.82e-01 -0.0422 0.0765 0.366 CD4_CTL L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 2.57e-01 0.0804 0.0707 0.355 CD4_Naive L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 1.29e-01 -0.0952 0.0625 0.355 CD4_Naive L2
ENSG00000134644 PUM1 -528425 sc-eQTL 6.62e-01 -0.022 0.0502 0.355 CD4_Naive L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 5.90e-01 -0.029 0.0537 0.355 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 4.77e-01 -0.0388 0.0545 0.355 CD4_Naive L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 3.94e-01 0.0534 0.0626 0.355 CD4_Naive L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.32e-01 0.0436 0.0907 0.355 CD4_TCM L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 8.79e-01 -0.0111 0.0731 0.355 CD4_TCM L2
ENSG00000134644 PUM1 -528425 sc-eQTL 7.65e-01 0.0194 0.0647 0.355 CD4_TCM L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.70e-01 -0.0229 0.0537 0.355 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 4.38e-02 -0.137 0.0675 0.355 CD4_TCM L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.22e-01 -0.0271 0.0759 0.355 CD4_TCM L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.20e-01 0.0717 0.0888 0.355 CD4_TEM L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 9.46e-01 0.00578 0.0848 0.355 CD4_TEM L2
ENSG00000134644 PUM1 -528425 sc-eQTL 3.00e-01 -0.0732 0.0705 0.355 CD4_TEM L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 9.31e-01 0.00617 0.0714 0.355 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 4.97e-01 -0.0568 0.0835 0.355 CD4_TEM L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 3.27e-01 -0.0808 0.0822 0.355 CD4_TEM L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.65e-02 0.187 0.0973 0.355 CD8_CTL L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 5.96e-01 0.04 0.0752 0.355 CD8_CTL L2
ENSG00000134644 PUM1 -528425 sc-eQTL 1.97e-01 -0.0942 0.0728 0.355 CD8_CTL L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 7.81e-01 0.0225 0.0809 0.355 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.35e-01 0.0288 0.085 0.355 CD8_CTL L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 2.82e-01 -0.086 0.0798 0.355 CD8_CTL L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 2.95e-01 -0.0928 0.0884 0.355 CD8_Naive L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.92e-01 0.0202 0.0764 0.355 CD8_Naive L2
ENSG00000134644 PUM1 -528425 sc-eQTL 4.61e-01 -0.0454 0.0614 0.355 CD8_Naive L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 8.33e-01 0.0124 0.0589 0.355 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 3.55e-01 0.068 0.0734 0.355 CD8_Naive L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 8.66e-01 -0.0135 0.0801 0.355 CD8_Naive L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 1.49e-02 0.237 0.0967 0.356 CD8_TCM L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.79e-01 0.0252 0.0899 0.356 CD8_TCM L2
ENSG00000134644 PUM1 -528425 sc-eQTL 4.43e-01 -0.065 0.0845 0.356 CD8_TCM L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 7.92e-01 0.0234 0.0885 0.356 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 9.64e-01 0.00371 0.082 0.356 CD8_TCM L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.27e-01 0.0524 0.0827 0.356 CD8_TCM L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.13e-02 -0.182 0.0929 0.358 CD8_TEM L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 1.34e-01 0.134 0.0894 0.358 CD8_TEM L2
ENSG00000134644 PUM1 -528425 sc-eQTL 1.22e-01 0.142 0.0914 0.358 CD8_TEM L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 4.31e-01 0.0681 0.0863 0.358 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 4.07e-01 0.0744 0.0895 0.358 CD8_TEM L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 3.33e-01 -0.0786 0.081 0.358 CD8_TEM L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 7.41e-01 0.0319 0.0964 0.359 MAIT L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 5.78e-01 0.0476 0.0854 0.359 MAIT L2
ENSG00000134644 PUM1 -528425 sc-eQTL 2.45e-01 0.0951 0.0816 0.359 MAIT L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.93e-01 -0.0305 0.0772 0.359 MAIT L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 9.39e-01 -0.00659 0.0861 0.359 MAIT L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 2.68e-01 -0.0982 0.0884 0.359 MAIT L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.16e-01 0.0636 0.0976 0.351 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.47e-01 -0.0267 0.0825 0.351 NK_CD56bright L2
ENSG00000134644 PUM1 -528425 sc-eQTL 8.15e-01 -0.0203 0.0867 0.351 NK_CD56bright L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 2.89e-01 -0.0905 0.0852 0.351 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.22e-01 -0.0306 0.0859 0.351 NK_CD56bright L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.20e-01 -0.0421 0.0846 0.351 NK_CD56bright L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 7.97e-01 0.0239 0.0928 0.353 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.52e-01 0.0786 0.0685 0.353 NK_CD56dim L2
ENSG00000134644 PUM1 -528425 sc-eQTL 4.46e-02 -0.141 0.0698 0.353 NK_CD56dim L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 9.09e-02 -0.127 0.0746 0.353 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.36e-01 0.111 0.0938 0.353 NK_CD56dim L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.46e-01 0.0252 0.0776 0.353 NK_CD56dim L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 9.40e-01 -0.00737 0.0983 0.365 NK_HLA L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 4.28e-01 -0.0696 0.0876 0.365 NK_HLA L2
ENSG00000134644 PUM1 -528425 sc-eQTL 6.29e-01 0.0413 0.0855 0.365 NK_HLA L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.18e-01 -0.0408 0.0816 0.365 NK_HLA L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 1.83e-01 0.116 0.0864 0.365 NK_HLA L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.02e-01 0.0321 0.0839 0.365 NK_HLA L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.04e-01 -0.0224 0.09 0.353 NK_cytokine L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 5.82e-01 -0.0387 0.0702 0.353 NK_cytokine L2
ENSG00000134644 PUM1 -528425 sc-eQTL 3.58e-01 0.0699 0.0758 0.353 NK_cytokine L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 1.17e-01 -0.131 0.0832 0.353 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.93e-01 0.0233 0.0886 0.353 NK_cytokine L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.47e-01 -0.0266 0.0825 0.353 NK_cytokine L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.52e-01 -0.0839 0.111 0.348 PB L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.30e-01 -0.0447 0.129 0.348 PB L2
ENSG00000134644 PUM1 -528425 sc-eQTL 9.96e-01 -0.000572 0.112 0.348 PB L2
ENSG00000162510 MATN1 -186019 sc-eQTL 8.62e-01 -0.0182 0.105 0.348 PB L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 8.29e-01 -0.0162 0.0748 0.348 PB L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 1.96e-01 0.132 0.102 0.348 PB L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.03e-01 0.0417 0.109 0.348 PB L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.13e-01 0.0361 0.0712 0.357 Pro_T L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 4.12e-01 0.0742 0.0903 0.357 Pro_T L2
ENSG00000134644 PUM1 -528425 sc-eQTL 9.00e-01 -0.0106 0.0844 0.357 Pro_T L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 9.82e-01 -0.00134 0.0605 0.357 Pro_T L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.09e-01 0.106 0.0843 0.357 Pro_T L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.70e-01 0.0332 0.0778 0.357 Pro_T L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 7.86e-01 -0.0252 0.0929 0.355 Treg L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.34e-01 -0.107 0.0896 0.355 Treg L2
ENSG00000134644 PUM1 -528425 sc-eQTL 9.88e-01 -0.00112 0.0719 0.355 Treg L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 4.44e-01 0.0631 0.0822 0.355 Treg L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 8.87e-01 0.0119 0.0839 0.355 Treg L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 4.75e-01 -0.06 0.0837 0.355 Treg L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 1.65e-01 0.126 0.09 0.356 cDC L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.25e-01 -0.0346 0.098 0.356 cDC L2
ENSG00000134644 PUM1 -528425 sc-eQTL 6.26e-01 -0.0411 0.0841 0.356 cDC L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 4.44e-01 -0.0452 0.0589 0.356 cDC L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 3.54e-02 -0.159 0.0748 0.356 cDC L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 1.00e-01 0.122 0.0739 0.356 cDC L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 1.39e-01 -0.118 0.0797 0.356 cDC L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.77e-01 0.0116 0.0748 0.355 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 9.62e-01 -0.004 0.0835 0.355 cMono_IL1B L2
ENSG00000134644 PUM1 -528425 sc-eQTL 3.72e-02 -0.117 0.0559 0.355 cMono_IL1B L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 3.82e-01 -0.0433 0.0495 0.355 cMono_IL1B L2
ENSG00000162512 SDC3 -371192 sc-eQTL 4.71e-01 0.0673 0.0933 0.355 cMono_IL1B L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 5.67e-02 -0.18 0.0938 0.355 cMono_IL1B L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 4.85e-01 0.0585 0.0835 0.355 cMono_IL1B L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 4.56e-01 -0.0582 0.0779 0.355 cMono_IL1B L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 7.71e-01 0.0232 0.0793 0.355 cMono_S100A L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 6.29e-01 -0.0453 0.0937 0.355 cMono_S100A L2
ENSG00000134644 PUM1 -528425 sc-eQTL 3.71e-01 -0.0607 0.0676 0.355 cMono_S100A L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 8.19e-01 -0.0119 0.0521 0.355 cMono_S100A L2
ENSG00000162512 SDC3 -371192 sc-eQTL 1.16e-01 0.141 0.0894 0.355 cMono_S100A L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 4.54e-02 -0.19 0.0944 0.355 cMono_S100A L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 4.07e-01 0.0642 0.0772 0.355 cMono_S100A L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 8.54e-01 0.0143 0.0777 0.355 cMono_S100A L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 2.72e-01 -0.128 0.116 0.352 gdT L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.93e-01 -0.105 0.0993 0.352 gdT L2
ENSG00000134644 PUM1 -528425 sc-eQTL 8.30e-01 -0.022 0.103 0.352 gdT L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 5.76e-01 0.0626 0.112 0.352 gdT L2
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 7.71e-01 0.03 0.103 0.352 gdT L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 3.11e-01 0.101 0.0995 0.352 gdT L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.02e-01 -0.0454 0.0871 0.36 intMono L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.82e-01 -0.101 0.0934 0.36 intMono L2
ENSG00000134644 PUM1 -528425 sc-eQTL 1.58e-01 -0.112 0.0791 0.36 intMono L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.58e-02 -0.114 0.0618 0.36 intMono L2
ENSG00000162512 SDC3 -371192 sc-eQTL 6.91e-01 0.034 0.0854 0.36 intMono L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 5.14e-02 -0.174 0.0886 0.36 intMono L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 9.00e-02 0.143 0.0841 0.36 intMono L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 7.92e-01 -0.0224 0.0847 0.36 intMono L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 9.33e-01 -0.00695 0.0823 0.357 ncMono L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 6.38e-01 -0.0413 0.0877 0.357 ncMono L2
ENSG00000134644 PUM1 -528425 sc-eQTL 1.93e-01 -0.0933 0.0714 0.357 ncMono L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 9.62e-01 0.00309 0.0651 0.357 ncMono L2
ENSG00000162512 SDC3 -371192 sc-eQTL 8.34e-03 0.191 0.0717 0.357 ncMono L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 1.15e-01 -0.125 0.0792 0.357 ncMono L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 5.86e-01 0.0434 0.0795 0.357 ncMono L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.32e-01 0.0516 0.0824 0.357 ncMono L2
ENSG00000060688 SNRNP40 -759222 sc-eQTL 8.44e-02 0.155 0.0895 0.364 pDC L2
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 2.46e-01 0.115 0.0987 0.364 pDC L2
ENSG00000134644 PUM1 -528425 sc-eQTL 8.45e-01 -0.0161 0.0822 0.364 pDC L2
ENSG00000162511 LAPTM5 -220208 sc-eQTL 4.46e-01 -0.0583 0.0763 0.364 pDC L2
ENSG00000168528 SERINC2 -871999 sc-eQTL 9.46e-01 0.00626 0.0927 0.364 pDC L2
ENSG00000284543 LINC01226 -968660 sc-eQTL 4.49e-01 0.0545 0.0718 0.364 pDC L2
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.52e-01 -0.0383 0.0846 0.364 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.20e-01 -0.0754 0.0932 0.355 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 9.96e-01 0.000408 0.0777 0.355 B_Memory LOneK1K
ENSG00000134644 PUM1 -528425 sc-eQTL 2.76e-01 0.075 0.0687 0.355 B_Memory LOneK1K
ENSG00000162510 MATN1 -186019 sc-eQTL 2.08e-01 -0.0989 0.0782 0.355 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -220208 sc-eQTL 6.11e-01 0.0251 0.0493 0.355 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 8.40e-01 -0.0132 0.0653 0.355 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -194127 sc-eQTL 3.40e-01 -0.0679 0.071 0.355 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -759222 sc-eQTL 5.38e-01 -0.0519 0.0841 0.355 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 4.01e-02 0.136 0.0659 0.355 B_Naive LOneK1K
ENSG00000134644 PUM1 -528425 sc-eQTL 6.70e-01 0.0269 0.0629 0.355 B_Naive LOneK1K
ENSG00000162510 MATN1 -186019 sc-eQTL 5.36e-01 0.0375 0.0605 0.355 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -220208 sc-eQTL 3.08e-01 -0.0435 0.0426 0.355 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 4.85e-01 0.0385 0.055 0.355 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.45e-01 -0.0302 0.0654 0.355 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -759222 sc-eQTL 6.12e-01 0.0363 0.0714 0.355 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 7.66e-01 -0.0241 0.0809 0.355 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -528425 sc-eQTL 6.83e-02 -0.0938 0.0512 0.355 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -220208 sc-eQTL 2.51e-01 -0.052 0.0452 0.355 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -371192 sc-eQTL 3.87e-01 0.08 0.0924 0.355 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -871999 sc-eQTL 5.73e-02 -0.18 0.0944 0.355 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -968660 sc-eQTL 2.51e-01 0.0895 0.0778 0.355 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -194127 sc-eQTL 5.66e-01 -0.0419 0.073 0.355 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.86e-01 -0.0547 0.0783 0.356 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 1.43e-01 -0.125 0.0853 0.356 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -528425 sc-eQTL 1.54e-01 -0.1 0.0699 0.356 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -220208 sc-eQTL 5.09e-01 -0.0371 0.0561 0.356 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -371192 sc-eQTL 3.95e-01 0.0698 0.0819 0.356 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -871999 sc-eQTL 1.14e-01 -0.134 0.0846 0.356 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -968660 sc-eQTL 2.84e-01 0.0866 0.0806 0.356 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.02e-01 0.0423 0.0809 0.356 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -759222 sc-eQTL 4.80e-01 -0.0619 0.0875 0.353 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -759416 sc-eQTL 5.87e-01 0.0326 0.0598 0.353 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -528425 sc-eQTL 4.58e-01 -0.0487 0.0655 0.353 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -220208 sc-eQTL 1.95e-01 -0.0949 0.073 0.353 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -180938 sc-eQTL 2.27e-01 0.102 0.0843 0.353 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -194127 sc-eQTL 6.53e-01 0.0328 0.0729 0.353 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000134644 PUM1 -528425 eQTL 0.00827 0.0378 0.0143 0.0 0.0 0.331
ENSG00000284543 LINC01226 -968715 eQTL 0.0417 0.0653 0.032 0.0 0.0 0.331

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 LINC01226 -968715 2.67e-07 1.3e-07 5.14e-08 1.81e-07 9.79e-08 9.91e-08 1.61e-07 5.4e-08 1.45e-07 5.42e-08 1.57e-07 9e-08 1.45e-07 7.13e-08 5.91e-08 7.53e-08 3.93e-08 1.33e-07 6.32e-08 4.21e-08 1.19e-07 1.27e-07 1.44e-07 3.03e-08 1.46e-07 1.14e-07 1.07e-07 9.61e-08 1.16e-07 1.07e-07 9.7e-08 3.59e-08 3.89e-08 8e-08 7.66e-08 3.2e-08 5.61e-08 8.61e-08 6.71e-08 3.8e-08 5e-08 1.35e-07 5.12e-08 1.52e-08 3.81e-08 1.86e-08 1.2e-07 1.89e-09 5.01e-08