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Genes within 1Mb (chr1:30537351:T:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.14e-01 -0.134 0.0842 0.688 B L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 8.34e-01 0.0142 0.0678 0.688 B L1
ENSG00000134644 PUM1 -528640 sc-eQTL 1.54e-01 0.081 0.0566 0.688 B L1
ENSG00000162510 MATN1 -186234 sc-eQTL 5.94e-01 -0.0319 0.0598 0.688 B L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 6.48e-01 -0.0214 0.0468 0.688 B L1
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 6.73e-01 0.0232 0.0549 0.688 B L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 7.87e-01 -0.0176 0.0649 0.688 B L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.77e-01 0.0206 0.0726 0.688 CD4T L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 8.81e-01 -0.00853 0.0567 0.688 CD4T L1
ENSG00000134644 PUM1 -528640 sc-eQTL 5.03e-01 -0.0339 0.0504 0.688 CD4T L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.85e-01 -0.0598 0.0558 0.688 CD4T L1
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.68e-01 0.0286 0.05 0.688 CD4T L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.25e-01 0.0381 0.0599 0.688 CD4T L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 9.31e-01 -0.00835 0.0962 0.688 CD8T L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 4.77e-01 0.0455 0.0639 0.688 CD8T L1
ENSG00000134644 PUM1 -528640 sc-eQTL 7.07e-01 -0.0212 0.0564 0.688 CD8T L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 5.01e-01 -0.0369 0.0547 0.688 CD8T L1
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 6.20e-01 0.0318 0.0641 0.688 CD8T L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 4.41e-01 0.0622 0.0805 0.688 CD8T L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 2.78e-01 0.0919 0.0845 0.689 DC L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.54e-01 0.143 0.0998 0.689 DC L1
ENSG00000134644 PUM1 -528640 sc-eQTL 9.27e-01 -0.00723 0.0786 0.689 DC L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 8.16e-02 -0.0975 0.0557 0.689 DC L1
ENSG00000168528 SERINC2 -872214 sc-eQTL 3.55e-01 -0.0855 0.0923 0.689 DC L1
ENSG00000284543 LINC01226 -968875 sc-eQTL 7.11e-01 -0.0227 0.0613 0.689 DC L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 3.35e-01 -0.0856 0.0885 0.689 DC L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.93e-01 -0.0567 0.0663 0.688 Mono L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.95e-01 -0.0323 0.0822 0.688 Mono L1
ENSG00000134644 PUM1 -528640 sc-eQTL 2.00e-01 -0.0676 0.0525 0.688 Mono L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 7.33e-02 -0.0866 0.0481 0.688 Mono L1
ENSG00000162512 SDC3 -371407 sc-eQTL 9.33e-03 0.241 0.0918 0.688 Mono L1
ENSG00000168528 SERINC2 -872214 sc-eQTL 9.89e-01 0.00135 0.1 0.688 Mono L1
ENSG00000284543 LINC01226 -968875 sc-eQTL 8.90e-01 0.0122 0.0881 0.688 Mono L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.08e-01 0.0396 0.077 0.688 Mono L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 8.32e-01 0.0198 0.0931 0.687 NK L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.46e-01 -0.0293 0.0637 0.687 NK L1
ENSG00000134644 PUM1 -528640 sc-eQTL 6.40e-01 -0.0313 0.0668 0.687 NK L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.22e-01 -0.0619 0.0768 0.687 NK L1
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 6.78e-02 0.157 0.0858 0.687 NK L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.05e-01 0.0414 0.0798 0.687 NK L1
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.31e-01 0.024 0.0698 0.688 Other_T L1
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.81e-01 0.0307 0.0746 0.688 Other_T L1
ENSG00000134644 PUM1 -528640 sc-eQTL 2.98e-01 0.0698 0.0669 0.688 Other_T L1
ENSG00000162511 LAPTM5 -220423 sc-eQTL 5.87e-01 -0.0299 0.0549 0.688 Other_T L1
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.39e-01 -0.0553 0.09 0.688 Other_T L1
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.57e-01 0.0169 0.0938 0.688 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759437 sc-eQTL 6.84e-01 -0.046 0.113 0.702 B_Activated L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.81e-01 0.152 0.113 0.702 B_Activated L2
ENSG00000134644 PUM1 -528640 sc-eQTL 1.30e-01 0.16 0.105 0.702 B_Activated L2
ENSG00000162510 MATN1 -186234 sc-eQTL 9.06e-01 -0.0109 0.0925 0.702 B_Activated L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.74e-01 -0.0463 0.0644 0.702 B_Activated L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 7.94e-01 0.0273 0.104 0.702 B_Activated L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.17e-01 -0.0597 0.0921 0.702 B_Activated L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 9.43e-01 0.00748 0.104 0.687 B_Intermediate L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 3.51e-01 -0.081 0.0866 0.687 B_Intermediate L2
ENSG00000134644 PUM1 -528640 sc-eQTL 9.47e-01 0.00547 0.0819 0.687 B_Intermediate L2
ENSG00000162510 MATN1 -186234 sc-eQTL 5.68e-01 -0.0487 0.0851 0.687 B_Intermediate L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.86e-01 -0.0692 0.0521 0.687 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 3.34e-01 0.0709 0.0732 0.687 B_Intermediate L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 3.87e-01 -0.0711 0.082 0.687 B_Intermediate L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.03e-01 -0.163 0.0995 0.688 B_Memory L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 2.33e-01 0.11 0.0919 0.688 B_Memory L2
ENSG00000134644 PUM1 -528640 sc-eQTL 3.97e-01 0.068 0.0801 0.688 B_Memory L2
ENSG00000162510 MATN1 -186234 sc-eQTL 3.89e-01 -0.0661 0.0767 0.688 B_Memory L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.83e-01 -0.0593 0.0679 0.688 B_Memory L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 2.12e-01 -0.0971 0.0776 0.688 B_Memory L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 2.08e-01 -0.115 0.0909 0.688 B_Memory L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.52e-01 -0.132 0.0917 0.688 B_Naive1 L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.86e-01 0.105 0.0792 0.688 B_Naive1 L2
ENSG00000134644 PUM1 -528640 sc-eQTL 5.06e-02 0.137 0.0695 0.688 B_Naive1 L2
ENSG00000162510 MATN1 -186234 sc-eQTL 8.75e-01 0.0112 0.0712 0.688 B_Naive1 L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.15e-01 -0.0748 0.0473 0.688 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.29e-01 0.0393 0.0624 0.688 B_Naive1 L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.32e-01 -0.037 0.0771 0.688 B_Naive1 L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 4.10e-01 0.0825 0.0998 0.689 B_Naive2 L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 9.42e-01 0.00601 0.0826 0.689 B_Naive2 L2
ENSG00000134644 PUM1 -528640 sc-eQTL 8.42e-01 -0.0161 0.0808 0.689 B_Naive2 L2
ENSG00000162510 MATN1 -186234 sc-eQTL 2.53e-01 -0.0886 0.0773 0.689 B_Naive2 L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.71e-01 -0.058 0.0525 0.689 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.67e-01 0.0439 0.0766 0.689 B_Naive2 L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.15e-01 0.0195 0.0828 0.689 B_Naive2 L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 5.66e-01 0.056 0.0973 0.693 CD4_CTL L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 7.26e-01 0.0336 0.0957 0.693 CD4_CTL L2
ENSG00000134644 PUM1 -528640 sc-eQTL 1.90e-01 -0.123 0.0935 0.693 CD4_CTL L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.21e-01 0.102 0.0834 0.693 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.66e-02 -0.174 0.0907 0.693 CD4_CTL L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.22e-01 -0.0518 0.0807 0.693 CD4_CTL L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 8.52e-01 0.0141 0.0754 0.688 CD4_Naive L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 4.08e-01 -0.0553 0.0667 0.688 CD4_Naive L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.39e-01 -0.0251 0.0533 0.688 CD4_Naive L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.53e-01 -0.0653 0.057 0.688 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 2.10e-01 0.0727 0.0578 0.688 CD4_Naive L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 4.89e-01 0.0461 0.0666 0.688 CD4_Naive L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 9.10e-01 0.0109 0.0957 0.688 CD4_TCM L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.37e-01 0.115 0.0767 0.688 CD4_TCM L2
ENSG00000134644 PUM1 -528640 sc-eQTL 8.37e-01 0.014 0.0683 0.688 CD4_TCM L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.52e-01 -0.0649 0.0565 0.688 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 4.11e-01 -0.0591 0.0718 0.688 CD4_TCM L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.78e-01 -0.0123 0.0801 0.688 CD4_TCM L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 9.85e-01 0.00177 0.0952 0.688 CD4_TEM L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.04e-01 -0.147 0.0902 0.688 CD4_TEM L2
ENSG00000134644 PUM1 -528640 sc-eQTL 4.11e-01 -0.0622 0.0755 0.688 CD4_TEM L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 8.88e-01 -0.0108 0.0765 0.688 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 4.40e-01 0.0691 0.0893 0.688 CD4_TEM L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 2.59e-01 -0.0994 0.0879 0.688 CD4_TEM L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.07e-01 0.108 0.106 0.688 CD8_CTL L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 4.46e-01 0.0619 0.0811 0.688 CD8_CTL L2
ENSG00000134644 PUM1 -528640 sc-eQTL 5.58e-01 -0.0462 0.0788 0.688 CD8_CTL L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.36e-01 -0.068 0.0872 0.688 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 3.04e-01 0.0943 0.0916 0.688 CD8_CTL L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.20e-01 -0.0197 0.0863 0.688 CD8_CTL L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.51e-01 -0.137 0.0952 0.688 CD8_Naive L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 8.54e-01 0.0152 0.0824 0.688 CD8_Naive L2
ENSG00000134644 PUM1 -528640 sc-eQTL 3.92e-01 -0.0569 0.0662 0.688 CD8_Naive L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.43e-01 -0.0929 0.0633 0.688 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 1.77e-01 0.107 0.079 0.688 CD8_Naive L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 3.95e-01 0.0735 0.0863 0.688 CD8_Naive L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 5.10e-02 0.204 0.104 0.692 CD8_TCM L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 4.90e-01 0.0665 0.0963 0.692 CD8_TCM L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.82e-01 0.0371 0.0906 0.692 CD8_TCM L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 7.84e-01 -0.026 0.0948 0.692 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 4.93e-01 0.0602 0.0877 0.692 CD8_TCM L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 4.39e-01 0.0687 0.0886 0.692 CD8_TCM L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 2.10e-01 -0.122 0.0975 0.683 CD8_TEM L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.90e-01 0.123 0.0934 0.683 CD8_TEM L2
ENSG00000134644 PUM1 -528640 sc-eQTL 2.59e-01 0.108 0.0956 0.683 CD8_TEM L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.24e-01 0.0722 0.09 0.683 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 7.52e-01 -0.0296 0.0936 0.683 CD8_TEM L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 9.84e-01 0.0017 0.0847 0.683 CD8_TEM L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.24e-01 0.154 0.0996 0.69 MAIT L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 2.81e-01 0.0957 0.0885 0.69 MAIT L2
ENSG00000134644 PUM1 -528640 sc-eQTL 3.16e-01 0.0854 0.0849 0.69 MAIT L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.82e-01 -0.107 0.0799 0.69 MAIT L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.31e-01 -0.056 0.0893 0.69 MAIT L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.93e-01 -0.0364 0.0921 0.69 MAIT L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 6.30e-01 -0.0502 0.104 0.682 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 7.33e-01 -0.03 0.088 0.682 NK_CD56bright L2
ENSG00000134644 PUM1 -528640 sc-eQTL 3.59e-01 0.0847 0.0922 0.682 NK_CD56bright L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 9.34e-01 -0.00752 0.0911 0.682 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 1.82e-01 0.122 0.0912 0.682 NK_CD56bright L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.80e-01 0.0499 0.0902 0.682 NK_CD56bright L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.34e-01 0.0958 0.099 0.685 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 3.76e-01 -0.065 0.0732 0.685 NK_CD56dim L2
ENSG00000134644 PUM1 -528640 sc-eQTL 4.26e-01 -0.06 0.0751 0.685 NK_CD56dim L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.23e-01 -0.0793 0.0801 0.685 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.50e-01 0.0601 0.1 0.685 NK_CD56dim L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.95e-01 0.011 0.0829 0.685 NK_CD56dim L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.24e-01 -0.103 0.104 0.687 NK_HLA L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 2.54e-02 0.207 0.0917 0.687 NK_HLA L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.11e-01 -0.0461 0.0904 0.687 NK_HLA L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 5.32e-01 -0.054 0.0863 0.687 NK_HLA L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 7.26e-01 -0.0322 0.0918 0.687 NK_HLA L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 1.36e-01 0.132 0.0883 0.687 NK_HLA L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.47e-01 0.0308 0.0955 0.685 NK_cytokine L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 1.96e-01 -0.0962 0.0743 0.685 NK_cytokine L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.55e-01 0.036 0.0806 0.685 NK_cytokine L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 7.56e-01 -0.0276 0.0887 0.685 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 7.37e-02 0.168 0.0933 0.685 NK_cytokine L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.19e-01 0.0435 0.0875 0.685 NK_cytokine L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.59e-01 -0.0345 0.112 0.678 PB L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 2.99e-01 0.136 0.13 0.678 PB L2
ENSG00000134644 PUM1 -528640 sc-eQTL 7.66e-01 -0.0338 0.113 0.678 PB L2
ENSG00000162510 MATN1 -186234 sc-eQTL 9.40e-01 -0.00793 0.106 0.678 PB L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.78e-01 -0.0818 0.0751 0.678 PB L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 3.12e-01 0.104 0.103 0.678 PB L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 8.88e-01 0.0156 0.11 0.678 PB L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 6.02e-01 0.0394 0.0753 0.693 Pro_T L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.82e-01 0.0392 0.0957 0.693 Pro_T L2
ENSG00000134644 PUM1 -528640 sc-eQTL 2.15e-01 0.111 0.0889 0.693 Pro_T L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.04e-01 0.0813 0.0638 0.693 Pro_T L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.45e-02 0.172 0.0887 0.693 Pro_T L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.05e-01 0.0549 0.0822 0.693 Pro_T L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.35e-01 0.147 0.0978 0.688 Treg L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 7.88e-01 -0.0256 0.0951 0.688 Treg L2
ENSG00000134644 PUM1 -528640 sc-eQTL 5.00e-01 -0.0514 0.076 0.688 Treg L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.15e-01 -0.0875 0.087 0.688 Treg L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.03e-01 0.0595 0.0887 0.688 Treg L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 7.17e-02 -0.159 0.088 0.688 Treg L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 4.98e-01 0.0661 0.0974 0.685 cDC L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 9.92e-01 0.00105 0.106 0.685 cDC L2
ENSG00000134644 PUM1 -528640 sc-eQTL 8.72e-01 0.0146 0.0907 0.685 cDC L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.47e-01 -0.0921 0.0632 0.685 cDC L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 2.36e-01 -0.0968 0.0813 0.685 cDC L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 4.23e-02 0.162 0.0793 0.685 cDC L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 1.09e-01 -0.138 0.0857 0.685 cDC L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 2.82e-01 -0.0849 0.0787 0.688 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 8.85e-01 -0.0128 0.0881 0.688 cMono_IL1B L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.65e-02 -0.109 0.0591 0.688 cMono_IL1B L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 8.07e-02 -0.0911 0.0519 0.688 cMono_IL1B L2
ENSG00000162512 SDC3 -371407 sc-eQTL 2.17e-02 0.225 0.0973 0.688 cMono_IL1B L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 7.29e-01 0.0346 0.0997 0.688 cMono_IL1B L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 7.28e-01 0.0307 0.0882 0.688 cMono_IL1B L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 9.35e-01 0.00669 0.0823 0.688 cMono_IL1B L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.66e-01 -0.0249 0.0836 0.688 cMono_S100A L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.09e-01 -0.0506 0.0988 0.688 cMono_S100A L2
ENSG00000134644 PUM1 -528640 sc-eQTL 9.11e-01 -0.00799 0.0714 0.688 cMono_S100A L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.40e-01 -0.0425 0.0548 0.688 cMono_S100A L2
ENSG00000162512 SDC3 -371407 sc-eQTL 3.44e-01 0.0898 0.0947 0.688 cMono_S100A L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 4.32e-01 -0.0789 0.1 0.688 cMono_S100A L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 6.32e-02 -0.151 0.0809 0.688 cMono_S100A L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 3.56e-01 0.0756 0.0818 0.688 cMono_S100A L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.08e-01 -0.123 0.12 0.67 gdT L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 8.45e-02 -0.178 0.103 0.67 gdT L2
ENSG00000134644 PUM1 -528640 sc-eQTL 3.38e-01 0.102 0.106 0.67 gdT L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 8.06e-01 -0.0286 0.116 0.67 gdT L2
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 5.80e-01 0.0593 0.107 0.67 gdT L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 2.40e-01 0.122 0.103 0.67 gdT L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 6.67e-01 -0.0403 0.0936 0.689 intMono L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.28e-01 -0.0487 0.101 0.689 intMono L2
ENSG00000134644 PUM1 -528640 sc-eQTL 4.10e-01 0.0703 0.0852 0.689 intMono L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.78e-01 -0.059 0.0668 0.689 intMono L2
ENSG00000162512 SDC3 -371407 sc-eQTL 2.98e-01 0.0955 0.0915 0.689 intMono L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 6.50e-01 -0.0437 0.096 0.689 intMono L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 2.62e-01 0.102 0.0907 0.689 intMono L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.21e-01 0.0584 0.0909 0.689 intMono L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.74e-01 0.0248 0.0863 0.686 ncMono L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.40e-01 -0.0431 0.092 0.686 ncMono L2
ENSG00000134644 PUM1 -528640 sc-eQTL 6.35e-01 0.0357 0.0752 0.686 ncMono L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 1.89e-01 -0.0897 0.068 0.686 ncMono L2
ENSG00000162512 SDC3 -371407 sc-eQTL 1.07e-02 0.194 0.0754 0.686 ncMono L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 9.04e-01 -0.0101 0.0836 0.686 ncMono L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 7.20e-01 0.0299 0.0835 0.686 ncMono L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 9.67e-01 -0.00354 0.0866 0.686 ncMono L2
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.45e-01 0.145 0.099 0.681 pDC L2
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 4.31e-01 0.0862 0.109 0.681 pDC L2
ENSG00000134644 PUM1 -528640 sc-eQTL 4.90e-01 -0.0627 0.0906 0.681 pDC L2
ENSG00000162511 LAPTM5 -220423 sc-eQTL 7.93e-02 -0.148 0.0835 0.681 pDC L2
ENSG00000168528 SERINC2 -872214 sc-eQTL 5.96e-01 -0.0543 0.102 0.681 pDC L2
ENSG00000284543 LINC01226 -968875 sc-eQTL 7.50e-01 -0.0253 0.0794 0.681 pDC L2
ENSG00000287510 AL137857.1 -194342 sc-eQTL 4.90e-01 0.0645 0.0933 0.681 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -759437 sc-eQTL 1.91e-01 -0.129 0.0983 0.688 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 9.57e-01 0.00441 0.0822 0.688 B_Memory LOneK1K
ENSG00000134644 PUM1 -528640 sc-eQTL 4.71e-01 0.0525 0.0727 0.688 B_Memory LOneK1K
ENSG00000162510 MATN1 -186234 sc-eQTL 3.41e-01 -0.079 0.0828 0.688 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.48e-01 -0.049 0.0521 0.688 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 9.82e-01 -0.00154 0.069 0.688 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -194342 sc-eQTL 4.12e-01 -0.0617 0.0751 0.688 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -759437 sc-eQTL 2.57e-01 -0.102 0.0898 0.688 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.87e-01 0.0287 0.0712 0.688 B_Naive LOneK1K
ENSG00000134644 PUM1 -528640 sc-eQTL 6.54e-01 0.0303 0.0673 0.688 B_Naive LOneK1K
ENSG00000162510 MATN1 -186234 sc-eQTL 9.61e-01 0.00318 0.0648 0.688 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -220423 sc-eQTL 3.53e-02 -0.0957 0.0452 0.688 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 2.95e-01 0.0617 0.0588 0.688 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -194342 sc-eQTL 7.61e-01 -0.0213 0.07 0.688 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -759437 sc-eQTL 3.04e-01 -0.0775 0.0752 0.688 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 6.78e-01 -0.0355 0.0854 0.688 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -528640 sc-eQTL 1.34e-01 -0.0816 0.0542 0.688 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -220423 sc-eQTL 8.63e-02 -0.082 0.0476 0.688 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -371407 sc-eQTL 3.69e-02 0.203 0.0967 0.688 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -872214 sc-eQTL 9.51e-01 -0.00619 0.101 0.688 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -968875 sc-eQTL 8.33e-01 -0.0174 0.0824 0.688 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.78e-01 0.043 0.0771 0.688 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -759437 sc-eQTL 9.68e-01 -0.00332 0.083 0.69 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 5.47e-01 -0.0547 0.0908 0.69 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -528640 sc-eQTL 7.95e-01 0.0194 0.0744 0.69 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -220423 sc-eQTL 2.28e-01 -0.0717 0.0593 0.69 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -371407 sc-eQTL 8.22e-02 0.151 0.0863 0.69 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -872214 sc-eQTL 7.24e-01 -0.0318 0.0902 0.69 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -968875 sc-eQTL 2.56e-01 0.0971 0.0853 0.69 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -194342 sc-eQTL 6.02e-01 0.0447 0.0856 0.69 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -759437 sc-eQTL 7.43e-01 0.0308 0.0938 0.685 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -759631 sc-eQTL 3.91e-01 -0.055 0.064 0.685 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -528640 sc-eQTL 5.58e-01 -0.0412 0.0701 0.685 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -220423 sc-eQTL 4.65e-01 -0.0573 0.0783 0.685 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -181153 sc-eQTL 1.42e-01 0.133 0.09 0.685 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -194342 sc-eQTL 5.03e-01 0.0523 0.078 0.685 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060688 SNRNP40 -759437 eQTL 0.00928 -0.0469 0.018 0.00188 0.0 0.292
ENSG00000186056 MATN1-AS1 -181153 eQTL 1.27e-02 0.0335 0.0134 0.0 0.0 0.292

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina