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Genes within 1Mb (chr1:30535368:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.25e-01 -0.0997 0.082 0.549 B L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 8.71e-02 -0.113 0.0655 0.549 B L1
ENSG00000134644 PUM1 -530623 sc-eQTL 5.23e-01 0.0354 0.0553 0.549 B L1
ENSG00000162510 MATN1 -188217 sc-eQTL 5.11e-01 -0.0382 0.0581 0.549 B L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.75e-01 -0.0405 0.0455 0.549 B L1
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.16e-01 0.0434 0.0533 0.549 B L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.60e-01 -0.0278 0.0631 0.549 B L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.66e-01 -0.0306 0.0707 0.549 CD4T L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 8.95e-01 0.00731 0.0553 0.549 CD4T L1
ENSG00000134644 PUM1 -530623 sc-eQTL 1.70e-01 -0.0675 0.049 0.549 CD4T L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 8.20e-01 -0.0124 0.0545 0.549 CD4T L1
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 2.74e-01 0.0533 0.0487 0.549 CD4T L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 8.63e-01 -0.0101 0.0584 0.549 CD4T L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.48e-01 -0.0561 0.0932 0.549 CD8T L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.42e-01 0.0205 0.062 0.549 CD8T L1
ENSG00000134644 PUM1 -530623 sc-eQTL 8.99e-01 0.00693 0.0546 0.549 CD8T L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 5.94e-01 -0.0283 0.053 0.549 CD8T L1
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 2.64e-01 0.0695 0.062 0.549 CD8T L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.24e-01 0.0383 0.0781 0.549 CD8T L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 4.37e-01 0.0633 0.0813 0.547 DC L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 5.50e-02 0.184 0.0955 0.547 DC L1
ENSG00000134644 PUM1 -530623 sc-eQTL 5.26e-01 0.048 0.0755 0.547 DC L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.21e-01 -0.0535 0.0538 0.547 DC L1
ENSG00000168528 SERINC2 -874197 sc-eQTL 4.00e-01 -0.0749 0.0888 0.547 DC L1
ENSG00000284543 LINC01226 -970858 sc-eQTL 7.92e-01 -0.0156 0.0589 0.547 DC L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 8.78e-01 -0.0131 0.0853 0.547 DC L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.37e-01 -0.0392 0.0635 0.549 Mono L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 8.51e-01 0.0148 0.0788 0.549 Mono L1
ENSG00000134644 PUM1 -530623 sc-eQTL 6.60e-01 -0.0222 0.0505 0.549 Mono L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.75e-01 -0.0629 0.0462 0.549 Mono L1
ENSG00000162512 SDC3 -373390 sc-eQTL 5.22e-02 0.173 0.0885 0.549 Mono L1
ENSG00000168528 SERINC2 -874197 sc-eQTL 8.21e-01 0.0217 0.0958 0.549 Mono L1
ENSG00000284543 LINC01226 -970858 sc-eQTL 5.78e-01 -0.047 0.0843 0.549 Mono L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 7.99e-01 0.0188 0.0737 0.549 Mono L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 4.12e-01 -0.0738 0.0898 0.547 NK L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.96e-01 -0.0644 0.0614 0.547 NK L1
ENSG00000134644 PUM1 -530623 sc-eQTL 4.24e-01 -0.0516 0.0645 0.547 NK L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 2.43e-01 -0.0867 0.0741 0.547 NK L1
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 3.08e-01 0.0851 0.0833 0.547 NK L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.42e-01 -0.0358 0.0771 0.547 NK L1
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.42e-01 0.0789 0.0673 0.549 Other_T L1
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 6.39e-01 -0.0339 0.0722 0.549 Other_T L1
ENSG00000134644 PUM1 -530623 sc-eQTL 7.81e-01 0.018 0.0649 0.549 Other_T L1
ENSG00000162511 LAPTM5 -222406 sc-eQTL 8.64e-01 -0.00914 0.0532 0.549 Other_T L1
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 7.65e-01 0.0261 0.0871 0.549 Other_T L1
ENSG00000287510 AL137857.1 -196325 sc-eQTL 8.92e-01 0.0123 0.0908 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -761420 sc-eQTL 8.55e-01 0.0201 0.11 0.569 B_Activated L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.33e-01 0.132 0.11 0.569 B_Activated L2
ENSG00000134644 PUM1 -530623 sc-eQTL 3.01e-01 0.106 0.103 0.569 B_Activated L2
ENSG00000162510 MATN1 -188217 sc-eQTL 5.45e-01 0.0545 0.0898 0.569 B_Activated L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.80e-01 -0.055 0.0626 0.569 B_Activated L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 2.73e-01 0.111 0.101 0.569 B_Activated L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 4.13e-01 0.0734 0.0894 0.569 B_Activated L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 8.74e-01 -0.0158 0.0997 0.547 B_Intermediate L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.61e-02 -0.184 0.0821 0.547 B_Intermediate L2
ENSG00000134644 PUM1 -530623 sc-eQTL 5.48e-01 0.0471 0.0783 0.547 B_Intermediate L2
ENSG00000162510 MATN1 -188217 sc-eQTL 6.82e-01 0.0334 0.0815 0.547 B_Intermediate L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 9.66e-03 -0.129 0.0493 0.547 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.37e-01 0.0546 0.0702 0.547 B_Intermediate L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.75e-01 -0.0442 0.0786 0.547 B_Intermediate L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 3.89e-01 -0.083 0.0962 0.55 B_Memory L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.51e-01 0.00546 0.0888 0.55 B_Memory L2
ENSG00000134644 PUM1 -530623 sc-eQTL 6.41e-01 -0.0361 0.0772 0.55 B_Memory L2
ENSG00000162510 MATN1 -188217 sc-eQTL 6.96e-01 -0.0289 0.0739 0.55 B_Memory L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 4.39e-02 -0.132 0.0649 0.55 B_Memory L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 7.69e-01 -0.022 0.075 0.55 B_Memory L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 3.60e-01 -0.0804 0.0876 0.55 B_Memory L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.36e-01 -0.106 0.0891 0.549 B_Naive1 L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.86e-01 -0.021 0.0772 0.549 B_Naive1 L2
ENSG00000134644 PUM1 -530623 sc-eQTL 9.27e-02 0.114 0.0676 0.549 B_Naive1 L2
ENSG00000162510 MATN1 -188217 sc-eQTL 8.51e-01 -0.013 0.0691 0.549 B_Naive1 L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.24e-02 -0.0983 0.0457 0.549 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 2.60e-01 0.0682 0.0604 0.549 B_Naive1 L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.31e-01 -0.047 0.0748 0.549 B_Naive1 L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 3.38e-01 0.0924 0.0961 0.549 B_Naive2 L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.75e-01 0.00245 0.0795 0.549 B_Naive2 L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.69e-01 -0.0229 0.0778 0.549 B_Naive2 L2
ENSG00000162510 MATN1 -188217 sc-eQTL 8.82e-01 -0.0111 0.0747 0.549 B_Naive2 L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.18e-01 -0.0792 0.0504 0.549 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 9.35e-01 -0.00606 0.0739 0.549 B_Naive2 L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 4.74e-01 -0.0572 0.0797 0.549 B_Naive2 L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 9.02e-01 0.0114 0.0931 0.55 CD4_CTL L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 5.89e-01 0.0495 0.0915 0.55 CD4_CTL L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.81e-02 -0.158 0.0891 0.55 CD4_CTL L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.17e-01 0.04 0.08 0.55 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 2.39e-01 -0.103 0.0872 0.55 CD4_CTL L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 1.58e-01 -0.109 0.0768 0.55 CD4_CTL L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.47e-01 -0.0444 0.0735 0.549 CD4_Naive L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.06e-01 -0.0825 0.065 0.549 CD4_Naive L2
ENSG00000134644 PUM1 -530623 sc-eQTL 4.01e-01 -0.0437 0.052 0.549 CD4_Naive L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.17e-01 -0.028 0.0558 0.549 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 1.11e-01 0.0901 0.0563 0.549 CD4_Naive L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.41e-01 -0.0303 0.065 0.549 CD4_Naive L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 8.74e-01 -0.0148 0.0932 0.549 CD4_TCM L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 1.65e-02 0.179 0.0741 0.549 CD4_TCM L2
ENSG00000134644 PUM1 -530623 sc-eQTL 6.09e-01 -0.034 0.0664 0.549 CD4_TCM L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 5.82e-01 -0.0304 0.0551 0.549 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 9.29e-01 0.00621 0.07 0.549 CD4_TCM L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.49e-01 -0.00503 0.078 0.549 CD4_TCM L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 7.07e-01 -0.0347 0.092 0.549 CD4_TEM L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 1.10e-01 -0.14 0.0872 0.549 CD4_TEM L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.38e-01 -0.0245 0.073 0.549 CD4_TEM L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.08e-01 -0.0379 0.0738 0.549 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 8.48e-01 -0.0166 0.0864 0.549 CD4_TEM L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 3.31e-01 -0.0828 0.085 0.549 CD4_TEM L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.76e-01 -0.0426 0.102 0.549 CD8_CTL L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.32e-01 0.0268 0.0781 0.549 CD8_CTL L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.27e-01 0.0266 0.0759 0.549 CD8_CTL L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.37e-01 -0.0807 0.0839 0.549 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 7.24e-01 0.0313 0.0883 0.549 CD8_CTL L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.30e-01 0.00728 0.0831 0.549 CD8_CTL L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 1.17e-01 -0.144 0.0911 0.549 CD8_Naive L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.96e-01 0.000439 0.079 0.549 CD8_Naive L2
ENSG00000134644 PUM1 -530623 sc-eQTL 6.68e-01 -0.0273 0.0636 0.549 CD8_Naive L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.58e-01 -0.0858 0.0606 0.549 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 1.79e-01 0.102 0.0757 0.549 CD8_Naive L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.03e-01 -0.0101 0.0828 0.549 CD8_Naive L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.77e-01 0.0559 0.1 0.549 CD8_TCM L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.00e-01 0.117 0.0914 0.549 CD8_TCM L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.95e-01 0.0225 0.0863 0.549 CD8_TCM L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 5.40e-01 -0.0554 0.0902 0.549 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.89e-01 0.0579 0.0835 0.549 CD8_TCM L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 1.01e-01 0.138 0.0839 0.549 CD8_TCM L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 8.66e-01 -0.0164 0.0967 0.543 CD8_TEM L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.78e-01 -0.101 0.0924 0.543 CD8_TEM L2
ENSG00000134644 PUM1 -530623 sc-eQTL 3.89e-01 -0.0818 0.0946 0.543 CD8_TEM L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 7.15e-01 0.0326 0.0891 0.543 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 3.05e-01 -0.0949 0.0922 0.543 CD8_TEM L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.87e-01 0.0455 0.0836 0.543 CD8_TEM L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.61e-02 0.216 0.0963 0.55 MAIT L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 6.42e-01 -0.0401 0.0863 0.55 MAIT L2
ENSG00000134644 PUM1 -530623 sc-eQTL 4.47e-01 0.0629 0.0826 0.55 MAIT L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 4.20e-01 -0.063 0.0779 0.55 MAIT L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.12e-01 0.0714 0.0868 0.55 MAIT L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 8.82e-01 0.0134 0.0896 0.55 MAIT L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.31e-01 -0.122 0.101 0.542 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.41e-01 0.00631 0.0857 0.542 NK_CD56bright L2
ENSG00000134644 PUM1 -530623 sc-eQTL 1.39e-01 0.133 0.0895 0.542 NK_CD56bright L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.37e-01 -0.132 0.0883 0.542 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 1.61e-01 0.125 0.0888 0.542 NK_CD56bright L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.22e-01 0.0563 0.0878 0.542 NK_CD56bright L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.15e-01 -0.119 0.0954 0.545 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.75e-01 -0.0772 0.0706 0.545 NK_CD56dim L2
ENSG00000134644 PUM1 -530623 sc-eQTL 5.38e-01 -0.0448 0.0726 0.545 NK_CD56dim L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.20e-01 -0.077 0.0773 0.545 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 3.15e-01 0.0974 0.0968 0.545 NK_CD56dim L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.56e-01 0.00441 0.08 0.545 NK_CD56dim L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.62e-01 -0.044 0.1 0.537 NK_HLA L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.61e-02 0.159 0.0889 0.537 NK_HLA L2
ENSG00000134644 PUM1 -530623 sc-eQTL 9.45e-02 -0.146 0.0867 0.537 NK_HLA L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.44e-01 -0.122 0.0829 0.537 NK_HLA L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.44e-01 -0.068 0.0886 0.537 NK_HLA L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.21e-01 0.055 0.0857 0.537 NK_HLA L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.68e-01 0.0393 0.0915 0.545 NK_cytokine L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.81e-01 -0.0769 0.0712 0.545 NK_cytokine L2
ENSG00000134644 PUM1 -530623 sc-eQTL 8.46e-01 -0.015 0.0772 0.545 NK_cytokine L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 5.88e-01 -0.0461 0.085 0.545 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 6.97e-01 0.0352 0.0901 0.545 NK_cytokine L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.47e-01 -0.0384 0.0838 0.545 NK_cytokine L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 8.41e-01 0.0235 0.117 0.548 PB L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.54e-01 0.155 0.135 0.548 PB L2
ENSG00000134644 PUM1 -530623 sc-eQTL 8.79e-01 -0.0179 0.118 0.548 PB L2
ENSG00000162510 MATN1 -188217 sc-eQTL 8.37e-01 0.0227 0.11 0.548 PB L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 9.01e-01 -0.00985 0.0786 0.548 PB L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 7.10e-01 0.0401 0.108 0.548 PB L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 4.63e-01 0.0842 0.114 0.548 PB L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 7.15e-01 -0.0267 0.0729 0.554 Pro_T L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 5.69e-01 -0.0527 0.0925 0.554 Pro_T L2
ENSG00000134644 PUM1 -530623 sc-eQTL 2.94e-01 0.0905 0.0861 0.554 Pro_T L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 8.71e-02 0.106 0.0615 0.554 Pro_T L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 5.69e-02 0.164 0.0858 0.554 Pro_T L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.43e-01 0.0485 0.0796 0.554 Pro_T L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 1.29e-03 0.302 0.0926 0.549 Treg L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.29e-01 0.0318 0.0918 0.549 Treg L2
ENSG00000134644 PUM1 -530623 sc-eQTL 2.34e-01 -0.0875 0.0732 0.549 Treg L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 8.57e-02 -0.144 0.0836 0.549 Treg L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 7.30e-01 0.0297 0.0857 0.549 Treg L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 2.61e-01 -0.0962 0.0854 0.549 Treg L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.12e-01 0.048 0.0944 0.539 cDC L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.84e-01 0.002 0.102 0.539 cDC L2
ENSG00000134644 PUM1 -530623 sc-eQTL 8.91e-01 0.0121 0.0879 0.539 cDC L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 4.96e-01 -0.042 0.0615 0.539 cDC L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 9.83e-01 -0.00164 0.0791 0.539 cDC L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 6.32e-01 0.0373 0.0777 0.539 cDC L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.53e-01 0.00498 0.0837 0.539 cDC L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 1.31e-01 -0.115 0.0759 0.549 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 8.53e-01 0.0158 0.0851 0.549 cMono_IL1B L2
ENSG00000134644 PUM1 -530623 sc-eQTL 6.04e-01 -0.0299 0.0576 0.549 cMono_IL1B L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.52e-01 -0.0722 0.0503 0.549 cMono_IL1B L2
ENSG00000162512 SDC3 -373390 sc-eQTL 2.87e-02 0.207 0.0941 0.549 cMono_IL1B L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 5.39e-01 0.0592 0.0963 0.549 cMono_IL1B L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 7.79e-01 -0.0239 0.0852 0.549 cMono_IL1B L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.90e-01 -0.001 0.0795 0.549 cMono_IL1B L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 6.69e-01 -0.0343 0.0801 0.549 cMono_S100A L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 3.92e-01 -0.0811 0.0945 0.549 cMono_S100A L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.39e-01 -0.0229 0.0684 0.549 cMono_S100A L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.82e-01 -0.0216 0.0526 0.549 cMono_S100A L2
ENSG00000162512 SDC3 -373390 sc-eQTL 4.12e-01 0.0746 0.0907 0.549 cMono_S100A L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 4.45e-01 -0.0735 0.0961 0.549 cMono_S100A L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 2.99e-02 -0.169 0.0773 0.549 cMono_S100A L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.29e-01 0.0379 0.0784 0.549 cMono_S100A L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.46e-01 0.0685 0.113 0.542 gdT L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 1.04e-01 -0.158 0.0965 0.542 gdT L2
ENSG00000134644 PUM1 -530623 sc-eQTL 9.49e-01 -0.00648 0.1 0.542 gdT L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.92e-01 -0.0434 0.109 0.542 gdT L2
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.41e-01 0.0776 0.101 0.542 gdT L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 3.44e-01 0.0924 0.0973 0.542 gdT L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 9.26e-01 -0.00834 0.0896 0.547 intMono L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 9.17e-01 -0.01 0.0963 0.547 intMono L2
ENSG00000134644 PUM1 -530623 sc-eQTL 4.45e-01 0.0624 0.0816 0.547 intMono L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.29e-01 0.031 0.064 0.547 intMono L2
ENSG00000162512 SDC3 -373390 sc-eQTL 8.27e-01 0.0192 0.0877 0.547 intMono L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 3.69e-01 0.0825 0.0917 0.547 intMono L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 4.26e-01 0.0694 0.0869 0.547 intMono L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 1.50e-01 0.125 0.0866 0.547 intMono L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 1.98e-01 0.106 0.0824 0.543 ncMono L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 7.55e-01 0.0276 0.0882 0.543 ncMono L2
ENSG00000134644 PUM1 -530623 sc-eQTL 5.30e-01 0.0453 0.072 0.543 ncMono L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.07e-01 -0.0337 0.0654 0.543 ncMono L2
ENSG00000162512 SDC3 -373390 sc-eQTL 3.41e-01 0.0699 0.0733 0.543 ncMono L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 2.16e-01 0.0991 0.0798 0.543 ncMono L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 6.89e-01 0.0321 0.08 0.543 ncMono L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 3.77e-01 -0.0733 0.0828 0.543 ncMono L2
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.37e-01 0.114 0.0959 0.531 pDC L2
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.09e-01 0.133 0.105 0.531 pDC L2
ENSG00000134644 PUM1 -530623 sc-eQTL 7.14e-01 -0.0322 0.0877 0.531 pDC L2
ENSG00000162511 LAPTM5 -222406 sc-eQTL 2.83e-01 -0.0874 0.0812 0.531 pDC L2
ENSG00000168528 SERINC2 -874197 sc-eQTL 7.52e-01 -0.0313 0.0988 0.531 pDC L2
ENSG00000284543 LINC01226 -970858 sc-eQTL 7.96e-01 0.0199 0.0767 0.531 pDC L2
ENSG00000287510 AL137857.1 -196325 sc-eQTL 4.24e-01 0.0722 0.0901 0.531 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -761420 sc-eQTL 3.19e-01 -0.0945 0.0945 0.549 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 3.09e-01 -0.0802 0.0787 0.549 B_Memory LOneK1K
ENSG00000134644 PUM1 -530623 sc-eQTL 7.56e-01 0.0217 0.0699 0.549 B_Memory LOneK1K
ENSG00000162510 MATN1 -188217 sc-eQTL 8.02e-01 0.02 0.0797 0.549 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -222406 sc-eQTL 6.21e-02 -0.0931 0.0497 0.549 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 4.92e-01 0.0455 0.0662 0.549 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -196325 sc-eQTL 7.59e-01 -0.0222 0.0722 0.549 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -761420 sc-eQTL 5.77e-01 -0.0488 0.0874 0.549 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 4.06e-01 -0.0575 0.069 0.549 B_Naive LOneK1K
ENSG00000134644 PUM1 -530623 sc-eQTL 9.15e-01 0.00695 0.0654 0.549 B_Naive LOneK1K
ENSG00000162510 MATN1 -188217 sc-eQTL 8.27e-01 -0.0138 0.063 0.549 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -222406 sc-eQTL 1.63e-02 -0.106 0.0437 0.549 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 3.32e-01 0.0556 0.0571 0.549 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -196325 sc-eQTL 7.07e-01 -0.0256 0.068 0.549 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -761420 sc-eQTL 2.30e-01 -0.087 0.0723 0.549 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 6.22e-01 -0.0405 0.0821 0.549 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -530623 sc-eQTL 6.06e-01 -0.027 0.0523 0.549 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -222406 sc-eQTL 2.25e-01 -0.0558 0.0459 0.549 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -373390 sc-eQTL 3.38e-02 0.199 0.0929 0.549 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -874197 sc-eQTL 8.53e-01 0.0179 0.0966 0.549 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -970858 sc-eQTL 2.96e-01 -0.0828 0.079 0.549 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -196325 sc-eQTL 9.46e-01 0.00502 0.0742 0.549 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -761420 sc-eQTL 3.78e-01 0.0703 0.0796 0.55 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 4.18e-01 0.0708 0.0872 0.55 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -530623 sc-eQTL 4.73e-01 0.0514 0.0714 0.55 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -222406 sc-eQTL 9.14e-01 -0.00618 0.0572 0.55 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -373390 sc-eQTL 4.10e-01 0.0688 0.0834 0.55 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -874197 sc-eQTL 3.23e-01 0.0856 0.0865 0.55 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -970858 sc-eQTL 4.15e-01 0.0671 0.0821 0.55 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -196325 sc-eQTL 5.26e-01 0.0523 0.0823 0.55 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -761420 sc-eQTL 4.91e-01 -0.0624 0.0906 0.545 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -761614 sc-eQTL 2.10e-01 -0.0776 0.0617 0.545 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -530623 sc-eQTL 3.22e-01 -0.0672 0.0677 0.545 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -222406 sc-eQTL 3.18e-01 -0.0757 0.0757 0.545 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -183136 sc-eQTL 3.80e-01 0.0768 0.0873 0.545 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -196325 sc-eQTL 6.94e-01 -0.0298 0.0755 0.545 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000237329 AL356320.2 -501366 eQTL 0.039 0.0705 0.0341 0.00114 0.0 0.443

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina