logo

Genes within 1Mb (chr1:30527974:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.85e-01 0.0834 0.0779 0.368 B L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 1.39e-01 0.0923 0.0622 0.368 B L1
ENSG00000134644 PUM1 -538017 sc-eQTL 9.86e-01 -0.000905 0.0525 0.368 B L1
ENSG00000162510 MATN1 -195611 sc-eQTL 6.83e-01 0.0226 0.0551 0.368 B L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 2.47e-01 0.05 0.0431 0.368 B L1
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 5.57e-01 -0.0298 0.0506 0.368 B L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.13e-01 0.0304 0.0599 0.368 B L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 9.83e-01 -0.00139 0.0674 0.368 CD4T L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 5.44e-01 0.0319 0.0526 0.368 CD4T L1
ENSG00000134644 PUM1 -538017 sc-eQTL 3.88e-01 0.0404 0.0468 0.368 CD4T L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 1.24e-01 -0.0797 0.0516 0.368 CD4T L1
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 2.93e-01 0.0488 0.0463 0.368 CD4T L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.41e-01 0.0652 0.0555 0.368 CD4T L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.41e-01 0.103 0.088 0.368 CD8T L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 4.01e-01 0.0494 0.0587 0.368 CD8T L1
ENSG00000134644 PUM1 -538017 sc-eQTL 8.25e-01 0.0114 0.0518 0.368 CD8T L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 5.55e-01 -0.0297 0.0502 0.368 CD8T L1
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 5.47e-01 -0.0355 0.0589 0.368 CD8T L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.89e-01 0.0786 0.0738 0.368 CD8T L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.77e-01 -0.0125 0.0805 0.369 DC L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.62e-01 -0.0166 0.0953 0.369 DC L1
ENSG00000134644 PUM1 -538017 sc-eQTL 1.37e-01 -0.111 0.0743 0.369 DC L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 3.82e-01 -0.0466 0.0532 0.369 DC L1
ENSG00000168528 SERINC2 -881591 sc-eQTL 1.46e-01 -0.128 0.0875 0.369 DC L1
ENSG00000284543 LINC01226 -978252 sc-eQTL 3.47e-01 -0.0548 0.0581 0.369 DC L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.30e-01 -0.128 0.0838 0.369 DC L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 6.23e-01 -0.0305 0.062 0.368 Mono L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.45e-01 0.0151 0.0769 0.368 Mono L1
ENSG00000134644 PUM1 -538017 sc-eQTL 3.52e-01 -0.0459 0.0492 0.368 Mono L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.10e-01 -0.0109 0.0454 0.368 Mono L1
ENSG00000162512 SDC3 -380784 sc-eQTL 1.13e-01 0.138 0.0867 0.368 Mono L1
ENSG00000168528 SERINC2 -881591 sc-eQTL 8.44e-01 0.0185 0.0935 0.368 Mono L1
ENSG00000284543 LINC01226 -978252 sc-eQTL 3.42e-01 -0.0783 0.0822 0.368 Mono L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.14e-01 0.114 0.0716 0.368 Mono L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 4.28e-01 0.0675 0.085 0.369 NK L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 7.12e-01 -0.0215 0.0582 0.369 NK L1
ENSG00000134644 PUM1 -538017 sc-eQTL 5.38e-01 0.0376 0.0611 0.369 NK L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 3.98e-02 0.144 0.0696 0.369 NK L1
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 9.25e-01 -0.00741 0.079 0.369 NK L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 4.53e-01 0.0548 0.0729 0.369 NK L1
ENSG00000060688 SNRNP40 -768814 sc-eQTL 4.45e-01 0.0496 0.0648 0.368 Other_T L1
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 4.78e-01 0.0493 0.0693 0.368 Other_T L1
ENSG00000134644 PUM1 -538017 sc-eQTL 9.57e-01 0.00339 0.0624 0.368 Other_T L1
ENSG00000162511 LAPTM5 -229800 sc-eQTL 4.47e-01 -0.0389 0.0511 0.368 Other_T L1
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 3.52e-01 -0.078 0.0836 0.368 Other_T L1
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.94e-01 0.0344 0.0872 0.368 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.32e-01 -0.126 0.105 0.37 B_Activated L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 6.67e-01 -0.0457 0.106 0.37 B_Activated L2
ENSG00000134644 PUM1 -538017 sc-eQTL 7.92e-01 0.026 0.0986 0.37 B_Activated L2
ENSG00000162510 MATN1 -195611 sc-eQTL 4.21e-01 -0.0693 0.086 0.37 B_Activated L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 5.59e-01 0.0351 0.06 0.37 B_Activated L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 2.52e-01 -0.111 0.0967 0.37 B_Activated L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 9.73e-01 -0.00294 0.0858 0.37 B_Activated L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 7.89e-01 0.0266 0.099 0.367 B_Intermediate L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.85e-01 0.0881 0.0823 0.367 B_Intermediate L2
ENSG00000134644 PUM1 -538017 sc-eQTL 3.35e-01 -0.075 0.0777 0.367 B_Intermediate L2
ENSG00000162510 MATN1 -195611 sc-eQTL 8.48e-01 0.0155 0.081 0.367 B_Intermediate L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 5.84e-01 0.0272 0.0497 0.367 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 5.56e-01 0.0411 0.0697 0.367 B_Intermediate L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.66e-01 -0.108 0.0777 0.367 B_Intermediate L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 5.71e-01 0.054 0.0951 0.366 B_Memory L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 7.68e-02 0.155 0.087 0.366 B_Memory L2
ENSG00000134644 PUM1 -538017 sc-eQTL 4.68e-01 0.0555 0.0762 0.366 B_Memory L2
ENSG00000162510 MATN1 -195611 sc-eQTL 6.56e-02 -0.134 0.0724 0.366 B_Memory L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 4.39e-01 0.0501 0.0646 0.366 B_Memory L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 1.46e-01 -0.107 0.0737 0.366 B_Memory L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 8.32e-01 0.0185 0.0867 0.366 B_Memory L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.75e-01 0.0135 0.0858 0.368 B_Naive1 L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.68e-01 0.082 0.0739 0.368 B_Naive1 L2
ENSG00000134644 PUM1 -538017 sc-eQTL 6.24e-01 0.032 0.0653 0.368 B_Naive1 L2
ENSG00000162510 MATN1 -195611 sc-eQTL 8.69e-01 0.0109 0.0663 0.368 B_Naive1 L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 6.40e-01 0.0207 0.0443 0.368 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.51e-01 -0.0185 0.0582 0.368 B_Naive1 L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.27e-01 0.11 0.0715 0.368 B_Naive1 L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 7.93e-01 -0.0242 0.0921 0.369 B_Naive2 L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 6.03e-01 0.0396 0.076 0.369 B_Naive2 L2
ENSG00000134644 PUM1 -538017 sc-eQTL 3.28e-01 -0.0727 0.0742 0.369 B_Naive2 L2
ENSG00000162510 MATN1 -195611 sc-eQTL 9.29e-01 0.00636 0.0714 0.369 B_Naive2 L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 7.79e-01 -0.0136 0.0485 0.369 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.87e-01 0.0191 0.0706 0.369 B_Naive2 L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 4.62e-01 0.0561 0.0762 0.369 B_Naive2 L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 5.57e-01 -0.0544 0.0924 0.366 CD4_CTL L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 5.20e-01 -0.0585 0.0909 0.366 CD4_CTL L2
ENSG00000134644 PUM1 -538017 sc-eQTL 3.40e-01 -0.0852 0.089 0.366 CD4_CTL L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 5.09e-01 0.0526 0.0794 0.366 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 4.10e-01 -0.0718 0.0868 0.366 CD4_CTL L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 8.18e-01 0.0177 0.0768 0.366 CD4_CTL L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.18e-01 0.0162 0.0705 0.368 CD4_Naive L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.20e-01 0.0766 0.0623 0.368 CD4_Naive L2
ENSG00000134644 PUM1 -538017 sc-eQTL 1.18e-01 0.0779 0.0496 0.368 CD4_Naive L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 3.39e-01 -0.0511 0.0533 0.368 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 1.35e-01 0.0809 0.054 0.368 CD4_Naive L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 5.72e-01 0.0352 0.0623 0.368 CD4_Naive L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 9.48e-01 -0.00574 0.0886 0.368 CD4_TCM L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.69e-01 0.0118 0.0714 0.368 CD4_TCM L2
ENSG00000134644 PUM1 -538017 sc-eQTL 6.60e-01 0.0279 0.0632 0.368 CD4_TCM L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 2.41e-01 -0.0615 0.0523 0.368 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 6.25e-01 -0.0326 0.0665 0.368 CD4_TCM L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.31e-01 0.0887 0.0739 0.368 CD4_TCM L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 3.14e-01 0.0901 0.0892 0.368 CD4_TEM L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 1.30e-01 -0.129 0.0848 0.368 CD4_TEM L2
ENSG00000134644 PUM1 -538017 sc-eQTL 2.04e-01 -0.0902 0.0707 0.368 CD4_TEM L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 6.88e-01 0.0288 0.0718 0.368 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 1.09e-02 0.212 0.0827 0.368 CD4_TEM L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.90e-01 -0.0331 0.0827 0.368 CD4_TEM L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 1.98e-01 0.123 0.0957 0.368 CD8_CTL L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 4.06e-01 0.0612 0.0735 0.368 CD8_CTL L2
ENSG00000134644 PUM1 -538017 sc-eQTL 8.55e-01 -0.0131 0.0715 0.368 CD8_CTL L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 9.82e-01 0.00174 0.0792 0.368 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 2.25e-01 0.101 0.083 0.368 CD8_CTL L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 3.84e-01 0.0682 0.0782 0.368 CD8_CTL L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.24e-01 0.0197 0.0884 0.368 CD8_Naive L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.25e-01 0.0168 0.0762 0.368 CD8_Naive L2
ENSG00000134644 PUM1 -538017 sc-eQTL 5.40e-01 -0.0376 0.0613 0.368 CD8_Naive L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 1.35e-01 -0.0876 0.0585 0.368 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.86e-01 -0.0199 0.0733 0.368 CD8_Naive L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.21e-01 0.0977 0.0796 0.368 CD8_Naive L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 3.29e-01 0.0972 0.0992 0.373 CD8_TCM L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 9.41e-01 -0.00678 0.0912 0.373 CD8_TCM L2
ENSG00000134644 PUM1 -538017 sc-eQTL 2.73e-02 0.188 0.0846 0.373 CD8_TCM L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 3.89e-01 0.0773 0.0896 0.373 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 3.98e-01 0.0703 0.0829 0.373 CD8_TCM L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 4.04e-01 -0.0701 0.0838 0.373 CD8_TCM L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 5.51e-01 -0.0553 0.0926 0.358 CD8_TEM L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 1.42e-02 0.217 0.0875 0.358 CD8_TEM L2
ENSG00000134644 PUM1 -538017 sc-eQTL 3.69e-01 0.0816 0.0907 0.358 CD8_TEM L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 6.35e-01 0.0406 0.0854 0.358 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 3.43e-01 -0.0841 0.0885 0.358 CD8_TEM L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 3.69e-01 0.0722 0.0801 0.358 CD8_TEM L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 3.44e-01 0.0886 0.0933 0.366 MAIT L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 3.69e-01 0.0745 0.0827 0.366 MAIT L2
ENSG00000134644 PUM1 -538017 sc-eQTL 9.13e-01 -0.00871 0.0794 0.366 MAIT L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 4.17e-01 -0.0608 0.0748 0.366 MAIT L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 9.79e-02 -0.138 0.0829 0.366 MAIT L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.05e-01 0.0445 0.086 0.366 MAIT L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 6.89e-01 -0.0386 0.0964 0.369 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 5.38e-01 -0.0503 0.0814 0.369 NK_CD56bright L2
ENSG00000134644 PUM1 -538017 sc-eQTL 8.22e-01 -0.0193 0.0856 0.369 NK_CD56bright L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 1.05e-01 0.136 0.0839 0.369 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 6.24e-01 0.0416 0.0848 0.369 NK_CD56bright L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 9.61e-01 -0.00412 0.0836 0.369 NK_CD56bright L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 1.71e-01 0.123 0.0894 0.369 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 6.07e-01 -0.0342 0.0664 0.369 NK_CD56dim L2
ENSG00000134644 PUM1 -538017 sc-eQTL 2.06e-01 0.0861 0.0679 0.369 NK_CD56dim L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.69e-02 0.124 0.0722 0.369 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 1.95e-01 -0.118 0.0907 0.369 NK_CD56dim L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 7.25e-01 0.0265 0.0751 0.369 NK_CD56dim L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 5.41e-01 -0.0585 0.0955 0.368 NK_HLA L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 3.63e-02 0.178 0.0844 0.368 NK_HLA L2
ENSG00000134644 PUM1 -538017 sc-eQTL 8.28e-01 0.0181 0.0832 0.368 NK_HLA L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 6.81e-02 0.144 0.0787 0.368 NK_HLA L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 4.19e-01 -0.0683 0.0843 0.368 NK_HLA L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.35e-01 0.122 0.0812 0.368 NK_HLA L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.25e-01 0.0195 0.0879 0.369 NK_cytokine L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.27e-01 -0.0829 0.0684 0.369 NK_cytokine L2
ENSG00000134644 PUM1 -538017 sc-eQTL 5.06e-01 0.0494 0.0741 0.369 NK_cytokine L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 2.34e-02 0.184 0.0807 0.369 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 1.22e-01 0.134 0.0861 0.369 NK_cytokine L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.36e-01 0.0954 0.0803 0.369 NK_cytokine L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 3.57e-01 0.0956 0.103 0.348 PB L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 1.70e-01 0.165 0.119 0.348 PB L2
ENSG00000134644 PUM1 -538017 sc-eQTL 8.51e-01 -0.0197 0.105 0.348 PB L2
ENSG00000162510 MATN1 -195611 sc-eQTL 4.14e-01 -0.0797 0.0972 0.348 PB L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 2.59e-01 -0.0785 0.0692 0.348 PB L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 6.54e-01 -0.0428 0.0952 0.348 PB L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 7.05e-01 -0.0385 0.101 0.348 PB L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.10e-01 0.0862 0.0686 0.37 Pro_T L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 9.19e-01 0.00885 0.0874 0.37 Pro_T L2
ENSG00000134644 PUM1 -538017 sc-eQTL 8.82e-02 0.139 0.081 0.37 Pro_T L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 7.82e-01 0.0162 0.0585 0.37 Pro_T L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 9.97e-01 0.000297 0.0817 0.37 Pro_T L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.65e-01 0.0326 0.0751 0.37 Pro_T L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 9.68e-01 0.00374 0.0931 0.368 Treg L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 7.90e-01 0.024 0.09 0.368 Treg L2
ENSG00000134644 PUM1 -538017 sc-eQTL 6.79e-01 -0.0298 0.072 0.368 Treg L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 4.10e-01 -0.0681 0.0824 0.368 Treg L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 8.47e-01 -0.0163 0.0841 0.368 Treg L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 9.64e-01 -0.00382 0.084 0.368 Treg L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 9.33e-01 0.00786 0.0929 0.373 cDC L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 6.18e-01 -0.0502 0.1 0.373 cDC L2
ENSG00000134644 PUM1 -538017 sc-eQTL 7.86e-01 0.0235 0.0864 0.373 cDC L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.32e-01 -0.0129 0.0605 0.373 cDC L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 5.35e-02 -0.15 0.0769 0.373 cDC L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 3.01e-01 0.0789 0.0762 0.373 cDC L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 7.67e-02 -0.145 0.0815 0.373 cDC L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.69e-01 0.0122 0.0742 0.368 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.29e-01 -0.0179 0.0827 0.368 cMono_IL1B L2
ENSG00000134644 PUM1 -538017 sc-eQTL 1.92e-01 -0.073 0.0558 0.368 cMono_IL1B L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.67e-01 0.00822 0.0491 0.368 cMono_IL1B L2
ENSG00000162512 SDC3 -380784 sc-eQTL 1.74e-01 0.126 0.0922 0.368 cMono_IL1B L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 7.96e-01 0.0243 0.0937 0.368 cMono_IL1B L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 8.36e-01 0.0172 0.0828 0.368 cMono_IL1B L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.79e-01 0.0837 0.0771 0.368 cMono_IL1B L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.62e-01 0.0135 0.0778 0.368 cMono_S100A L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 5.30e-01 0.0578 0.0919 0.368 cMono_S100A L2
ENSG00000134644 PUM1 -538017 sc-eQTL 5.31e-01 0.0417 0.0664 0.368 cMono_S100A L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 5.11e-01 -0.0336 0.051 0.368 cMono_S100A L2
ENSG00000162512 SDC3 -380784 sc-eQTL 6.19e-01 -0.0439 0.0882 0.368 cMono_S100A L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 9.56e-01 -0.00518 0.0934 0.368 cMono_S100A L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 1.33e-02 -0.187 0.0748 0.368 cMono_S100A L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.72e-01 0.0837 0.076 0.368 cMono_S100A L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.25e-01 -0.141 0.116 0.352 gdT L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 5.61e-01 0.0582 0.1 0.352 gdT L2
ENSG00000134644 PUM1 -538017 sc-eQTL 6.40e-01 0.0484 0.103 0.352 gdT L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 7.48e-01 -0.0362 0.112 0.352 gdT L2
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 5.17e-01 -0.0671 0.103 0.352 gdT L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 5.32e-01 0.0627 0.1 0.352 gdT L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 1.91e-01 -0.113 0.0863 0.371 intMono L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 3.81e-01 0.0817 0.093 0.371 intMono L2
ENSG00000134644 PUM1 -538017 sc-eQTL 3.41e-02 0.167 0.0782 0.371 intMono L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.54e-01 -0.0114 0.062 0.371 intMono L2
ENSG00000162512 SDC3 -380784 sc-eQTL 1.32e-01 0.128 0.0845 0.371 intMono L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 6.99e-01 -0.0345 0.0889 0.371 intMono L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 7.36e-01 -0.0285 0.0842 0.371 intMono L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 9.83e-01 -0.0018 0.0843 0.371 intMono L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 5.93e-02 -0.154 0.0813 0.364 ncMono L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 6.56e-01 -0.039 0.0874 0.364 ncMono L2
ENSG00000134644 PUM1 -538017 sc-eQTL 6.28e-01 0.0347 0.0714 0.364 ncMono L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 1.24e-01 -0.0997 0.0645 0.364 ncMono L2
ENSG00000162512 SDC3 -380784 sc-eQTL 1.08e-01 0.117 0.0723 0.364 ncMono L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 5.43e-01 -0.0483 0.0793 0.364 ncMono L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 1.31e-01 -0.119 0.0789 0.364 ncMono L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 2.76e-01 0.0897 0.082 0.364 ncMono L2
ENSG00000060688 SNRNP40 -768814 sc-eQTL 4.35e-01 -0.0745 0.0952 0.367 pDC L2
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.66e-01 -0.116 0.104 0.367 pDC L2
ENSG00000134644 PUM1 -538017 sc-eQTL 1.67e-02 -0.206 0.0852 0.367 pDC L2
ENSG00000162511 LAPTM5 -229800 sc-eQTL 9.81e-01 -0.00188 0.0807 0.367 pDC L2
ENSG00000168528 SERINC2 -881591 sc-eQTL 1.54e-01 -0.139 0.0972 0.367 pDC L2
ENSG00000284543 LINC01226 -978252 sc-eQTL 3.05e-01 -0.078 0.0757 0.367 pDC L2
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.19e-01 0.139 0.0886 0.367 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -768814 sc-eQTL 6.49e-01 -0.0422 0.0925 0.368 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 2.81e-01 0.0831 0.0768 0.368 B_Memory LOneK1K
ENSG00000134644 PUM1 -538017 sc-eQTL 5.91e-01 -0.0368 0.0682 0.368 B_Memory LOneK1K
ENSG00000162510 MATN1 -195611 sc-eQTL 7.42e-01 -0.0256 0.0778 0.368 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -229800 sc-eQTL 3.50e-01 0.0457 0.0488 0.368 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.01e-01 -0.0249 0.0647 0.368 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -203719 sc-eQTL 4.77e-01 -0.0502 0.0704 0.368 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -768814 sc-eQTL 7.20e-01 -0.0304 0.0847 0.368 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 3.16e-01 0.0671 0.0668 0.368 B_Naive LOneK1K
ENSG00000134644 PUM1 -538017 sc-eQTL 4.78e-01 -0.0449 0.0633 0.368 B_Naive LOneK1K
ENSG00000162510 MATN1 -195611 sc-eQTL 4.31e-01 0.0481 0.0609 0.368 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.16e-01 -0.00998 0.0429 0.368 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.39e-01 0.0185 0.0554 0.368 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -203719 sc-eQTL 3.25e-01 0.0648 0.0657 0.368 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -768814 sc-eQTL 8.22e-01 0.0159 0.0705 0.368 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 7.92e-01 0.0211 0.0799 0.368 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -538017 sc-eQTL 2.71e-01 -0.0561 0.0508 0.368 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -229800 sc-eQTL 8.87e-01 -0.00635 0.0448 0.368 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -380784 sc-eQTL 4.57e-01 0.068 0.0913 0.368 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -881591 sc-eQTL 9.30e-01 0.00824 0.094 0.368 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -978252 sc-eQTL 4.68e-01 -0.0559 0.077 0.368 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -203719 sc-eQTL 1.40e-01 0.106 0.0718 0.368 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -768814 sc-eQTL 3.01e-02 -0.169 0.0773 0.371 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 8.16e-01 0.0199 0.0856 0.371 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -538017 sc-eQTL 6.30e-01 0.0338 0.0701 0.371 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -229800 sc-eQTL 2.33e-01 -0.0669 0.0559 0.371 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -380784 sc-eQTL 4.78e-02 0.162 0.0811 0.371 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -881591 sc-eQTL 5.65e-01 -0.0489 0.0849 0.371 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -978252 sc-eQTL 4.40e-01 -0.0623 0.0805 0.371 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -203719 sc-eQTL 6.15e-01 0.0406 0.0807 0.371 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -768814 sc-eQTL 2.66e-01 0.0952 0.0853 0.369 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -769008 sc-eQTL 4.97e-01 -0.0397 0.0584 0.369 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -538017 sc-eQTL 3.83e-01 0.0559 0.0639 0.369 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -229800 sc-eQTL 4.56e-02 0.143 0.0709 0.369 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -190530 sc-eQTL 7.80e-01 -0.0231 0.0825 0.369 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -203719 sc-eQTL 3.71e-01 0.0638 0.0711 0.369 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -735707 eQTL 0.0108 -0.0892 0.0349 0.0019 0.0 0.38
ENSG00000237329 AL356320.2 -508760 eQTL 0.0189 -0.0836 0.0355 0.00157 0.0 0.38

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000060688 \N -768814 1.24e-06 2.15e-06 6.57e-08 3.2e-07 1.08e-07 2.01e-07 6.72e-07 5.43e-08 8.61e-07 1.21e-07 1.09e-06 5.53e-07 1.76e-06 2.79e-07 5.72e-07 1.84e-07 3.69e-07 4.39e-07 7.76e-08 5.04e-08 1.52e-07 3.92e-07 3.07e-07 3.4e-08 1.06e-06 1.86e-07 1.31e-07 1.1e-07 2.57e-07 4.51e-07 5.3e-07 3.8e-08 2.91e-08 1.23e-07 3.16e-07 3.18e-08 5.29e-08 9.26e-08 6.41e-08 3.98e-08 2.99e-08 1.52e-06 3.4e-08 2.88e-08 7.79e-08 1.71e-08 7.92e-08 4.09e-09 4.91e-08