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Genes within 1Mb (chr1:30519650:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.14e-01 0.0961 0.0771 0.382 B L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 3.26e-01 0.0608 0.0618 0.382 B L1
ENSG00000134644 PUM1 -546341 sc-eQTL 9.03e-01 0.00634 0.052 0.382 B L1
ENSG00000162510 MATN1 -203935 sc-eQTL 2.12e-01 -0.0681 0.0544 0.382 B L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.52e-01 -0.0135 0.0428 0.382 B L1
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.16e-01 0.00529 0.0501 0.382 B L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.19e-02 0.135 0.0586 0.382 B L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.44e-01 0.0219 0.0669 0.382 CD4T L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.92e-01 -0.0359 0.0522 0.382 CD4T L1
ENSG00000134644 PUM1 -546341 sc-eQTL 7.39e-01 -0.0155 0.0465 0.382 CD4T L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.47e-01 -0.0485 0.0515 0.382 CD4T L1
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 7.20e-02 0.0828 0.0458 0.382 CD4T L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 1.25e-01 0.0847 0.055 0.382 CD4T L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.50e-01 -0.103 0.089 0.382 CD8T L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.74e-01 -0.0807 0.0591 0.382 CD8T L1
ENSG00000134644 PUM1 -546341 sc-eQTL 9.41e-01 -0.00388 0.0523 0.382 CD8T L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.52e-02 -0.107 0.0503 0.382 CD8T L1
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.90e-01 -0.000748 0.0595 0.382 CD8T L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 7.82e-01 0.0207 0.0748 0.382 CD8T L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 4.94e-01 -0.0538 0.0786 0.381 DC L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.81e-01 -0.00222 0.0932 0.381 DC L1
ENSG00000134644 PUM1 -546341 sc-eQTL 8.10e-02 -0.127 0.0724 0.381 DC L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.89e-01 -0.014 0.0521 0.381 DC L1
ENSG00000168528 SERINC2 -889915 sc-eQTL 8.56e-02 0.147 0.0853 0.381 DC L1
ENSG00000284543 LINC01226 -986576 sc-eQTL 9.72e-01 0.00199 0.0569 0.381 DC L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 8.05e-01 -0.0204 0.0824 0.381 DC L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 5.75e-01 -0.0339 0.0603 0.382 Mono L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 7.72e-01 -0.0217 0.0747 0.382 Mono L1
ENSG00000134644 PUM1 -546341 sc-eQTL 4.71e-01 0.0346 0.0479 0.382 Mono L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.01e-01 0.0722 0.0438 0.382 Mono L1
ENSG00000162512 SDC3 -389108 sc-eQTL 9.00e-01 -0.0106 0.0847 0.382 Mono L1
ENSG00000168528 SERINC2 -889915 sc-eQTL 1.23e-01 0.14 0.0904 0.382 Mono L1
ENSG00000284543 LINC01226 -986576 sc-eQTL 6.47e-01 0.0367 0.08 0.382 Mono L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 3.74e-02 0.145 0.0693 0.382 Mono L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.77e-01 0.0238 0.084 0.382 NK L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.46e-01 0.00392 0.0575 0.382 NK L1
ENSG00000134644 PUM1 -546341 sc-eQTL 4.80e-01 -0.0426 0.0602 0.382 NK L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 5.98e-01 0.0366 0.0693 0.382 NK L1
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 2.54e-01 0.0888 0.0777 0.382 NK L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 3.54e-01 0.0667 0.0718 0.382 NK L1
ENSG00000060688 SNRNP40 -777138 sc-eQTL 1.38e-01 0.0935 0.0628 0.382 Other_T L1
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.11e-01 0.0556 0.0674 0.382 Other_T L1
ENSG00000134644 PUM1 -546341 sc-eQTL 5.43e-01 0.0369 0.0607 0.382 Other_T L1
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.33e-01 -0.0747 0.0495 0.382 Other_T L1
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 7.79e-01 0.0229 0.0815 0.382 Other_T L1
ENSG00000287510 AL137857.1 -212043 sc-eQTL 1.30e-01 -0.128 0.0844 0.382 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -777138 sc-eQTL 1.30e-01 -0.152 0.0997 0.383 B_Activated L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.20e-01 0.157 0.101 0.383 B_Activated L2
ENSG00000134644 PUM1 -546341 sc-eQTL 6.85e-02 -0.171 0.0932 0.383 B_Activated L2
ENSG00000162510 MATN1 -203935 sc-eQTL 1.18e-01 0.128 0.0817 0.383 B_Activated L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 6.84e-01 0.0233 0.0573 0.383 B_Activated L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.55e-02 0.154 0.0919 0.383 B_Activated L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 3.39e-01 -0.0784 0.0817 0.383 B_Activated L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 5.41e-01 -0.0588 0.096 0.382 B_Intermediate L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.30e-01 0.0632 0.0799 0.382 B_Intermediate L2
ENSG00000134644 PUM1 -546341 sc-eQTL 1.55e-01 0.107 0.0751 0.382 B_Intermediate L2
ENSG00000162510 MATN1 -203935 sc-eQTL 1.76e-01 -0.106 0.0782 0.382 B_Intermediate L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 6.04e-01 -0.0251 0.0482 0.382 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 2.91e-01 0.0714 0.0675 0.382 B_Intermediate L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.49e-01 0.0873 0.0755 0.382 B_Intermediate L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 4.13e-02 0.188 0.0915 0.381 B_Memory L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.78e-01 0.0604 0.085 0.381 B_Memory L2
ENSG00000134644 PUM1 -546341 sc-eQTL 3.32e-01 -0.0719 0.0739 0.381 B_Memory L2
ENSG00000162510 MATN1 -203935 sc-eQTL 1.62e-01 -0.099 0.0705 0.381 B_Memory L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 9.06e-01 0.00739 0.0628 0.381 B_Memory L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.01e-01 0.00891 0.0719 0.381 B_Memory L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.00e-01 -0.108 0.0838 0.381 B_Memory L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 1.30e-01 0.128 0.0842 0.382 B_Naive1 L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.17e-02 0.123 0.0726 0.382 B_Naive1 L2
ENSG00000134644 PUM1 -546341 sc-eQTL 5.45e-01 -0.0391 0.0644 0.382 B_Naive1 L2
ENSG00000162510 MATN1 -203935 sc-eQTL 1.52e-01 -0.0936 0.0651 0.382 B_Naive1 L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.93e-01 -0.0115 0.0437 0.382 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 3.08e-01 -0.0585 0.0573 0.382 B_Naive1 L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.77e-03 0.21 0.0694 0.382 B_Naive1 L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 8.58e-01 0.0162 0.0905 0.382 B_Naive2 L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.92e-01 -0.0514 0.0746 0.382 B_Naive2 L2
ENSG00000134644 PUM1 -546341 sc-eQTL 7.31e-01 0.0251 0.0731 0.382 B_Naive2 L2
ENSG00000162510 MATN1 -203935 sc-eQTL 4.94e-01 -0.048 0.0701 0.382 B_Naive2 L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 4.08e-01 -0.0395 0.0476 0.382 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 1.11e-01 0.11 0.069 0.382 B_Naive2 L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 8.15e-01 -0.0176 0.075 0.382 B_Naive2 L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.48e-01 0.106 0.0917 0.386 CD4_CTL L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 5.76e-01 -0.0507 0.0904 0.386 CD4_CTL L2
ENSG00000134644 PUM1 -546341 sc-eQTL 3.27e-01 0.087 0.0885 0.386 CD4_CTL L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.99e-01 0.101 0.0788 0.386 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 1.03e-01 -0.141 0.0859 0.386 CD4_CTL L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 9.39e-01 0.00585 0.0763 0.386 CD4_CTL L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.85e-01 -0.0192 0.0702 0.382 CD4_Naive L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.90e-01 -0.000814 0.0622 0.382 CD4_Naive L2
ENSG00000134644 PUM1 -546341 sc-eQTL 4.18e-01 -0.0403 0.0496 0.382 CD4_Naive L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.56e-01 -0.0491 0.0531 0.382 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 1.41e-01 0.0794 0.0538 0.382 CD4_Naive L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.44e-01 0.0723 0.0619 0.382 CD4_Naive L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 9.04e-01 -0.0106 0.0875 0.382 CD4_TCM L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 5.50e-01 -0.0422 0.0705 0.382 CD4_TCM L2
ENSG00000134644 PUM1 -546341 sc-eQTL 6.16e-01 -0.0314 0.0624 0.382 CD4_TCM L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 6.95e-01 -0.0203 0.0518 0.382 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 6.39e-02 0.121 0.0652 0.382 CD4_TCM L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 1.94e-01 0.095 0.0729 0.382 CD4_TCM L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.91e-01 0.0234 0.0884 0.382 CD4_TEM L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 8.10e-01 -0.0203 0.0842 0.382 CD4_TEM L2
ENSG00000134644 PUM1 -546341 sc-eQTL 7.68e-01 -0.0207 0.0702 0.382 CD4_TEM L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 2.33e-01 -0.0846 0.0707 0.382 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 3.42e-01 0.0789 0.0829 0.382 CD4_TEM L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 5.10e-02 -0.159 0.0811 0.382 CD4_TEM L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.66e-01 -0.107 0.0955 0.382 CD8_CTL L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 3.45e-01 -0.0694 0.0733 0.382 CD8_CTL L2
ENSG00000134644 PUM1 -546341 sc-eQTL 9.97e-01 0.000267 0.0713 0.382 CD8_CTL L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.66e-01 -0.0235 0.079 0.382 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 4.32e-02 0.167 0.0823 0.382 CD8_CTL L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 3.93e-01 -0.0667 0.078 0.382 CD8_CTL L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 6.42e-01 0.0414 0.089 0.382 CD8_Naive L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 5.55e-02 -0.147 0.0761 0.382 CD8_Naive L2
ENSG00000134644 PUM1 -546341 sc-eQTL 6.00e-01 0.0325 0.0618 0.382 CD8_Naive L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 4.76e-02 -0.117 0.0587 0.382 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 5.71e-01 -0.0419 0.0739 0.382 CD8_Naive L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 7.56e-01 -0.025 0.0805 0.382 CD8_Naive L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 5.83e-01 -0.0537 0.0977 0.377 CD8_TCM L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 8.48e-01 -0.0172 0.0896 0.377 CD8_TCM L2
ENSG00000134644 PUM1 -546341 sc-eQTL 5.34e-01 -0.0525 0.0842 0.377 CD8_TCM L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.21e-01 -0.137 0.0877 0.377 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 1.10e-01 0.13 0.0811 0.377 CD8_TCM L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.07e-01 0.104 0.0822 0.377 CD8_TCM L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 3.53e-02 -0.195 0.0921 0.37 CD8_TEM L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 5.92e-01 0.0479 0.0892 0.37 CD8_TEM L2
ENSG00000134644 PUM1 -546341 sc-eQTL 5.05e-01 0.0609 0.0912 0.37 CD8_TEM L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 9.65e-02 -0.142 0.0852 0.37 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 6.46e-03 -0.241 0.0874 0.37 CD8_TEM L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 8.00e-01 0.0204 0.0806 0.37 CD8_TEM L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 3.91e-01 0.0805 0.0936 0.381 MAIT L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 7.31e-01 0.0286 0.0831 0.381 MAIT L2
ENSG00000134644 PUM1 -546341 sc-eQTL 6.30e-01 -0.0384 0.0796 0.381 MAIT L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.53e-01 -0.0697 0.075 0.381 MAIT L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 6.78e-01 0.0348 0.0836 0.381 MAIT L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.37e-02 -0.159 0.0855 0.381 MAIT L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 5.63e-01 -0.0551 0.0951 0.384 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.80e-01 0.108 0.0801 0.384 NK_CD56bright L2
ENSG00000134644 PUM1 -546341 sc-eQTL 8.40e-01 0.0171 0.0845 0.384 NK_CD56bright L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 5.61e-01 0.0485 0.0833 0.384 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 3.49e-01 -0.0785 0.0836 0.384 NK_CD56bright L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.35e-01 0.0979 0.0822 0.384 NK_CD56bright L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 3.11e-01 -0.0912 0.0898 0.381 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 8.87e-01 0.00945 0.0666 0.381 NK_CD56dim L2
ENSG00000134644 PUM1 -546341 sc-eQTL 6.36e-01 -0.0323 0.0683 0.381 NK_CD56dim L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 9.45e-01 -0.00505 0.0728 0.381 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.67e-01 -0.00381 0.0912 0.381 NK_CD56dim L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 4.96e-01 0.0513 0.0752 0.381 NK_CD56dim L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 6.77e-01 -0.0397 0.0952 0.379 NK_HLA L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 2.48e-01 0.0981 0.0848 0.379 NK_HLA L2
ENSG00000134644 PUM1 -546341 sc-eQTL 9.88e-01 0.00122 0.0829 0.379 NK_HLA L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.16e-01 -0.0288 0.0791 0.379 NK_HLA L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.71e-02 0.139 0.0836 0.379 NK_HLA L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 8.12e-02 0.142 0.0807 0.379 NK_HLA L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 3.54e-01 0.0809 0.0872 0.381 NK_cytokine L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 3.79e-01 -0.06 0.0681 0.381 NK_cytokine L2
ENSG00000134644 PUM1 -546341 sc-eQTL 5.44e-01 -0.0447 0.0737 0.381 NK_cytokine L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.29e-01 0.0793 0.081 0.381 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 2.79e-01 0.0931 0.0858 0.381 NK_cytokine L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.23e-01 0.0394 0.08 0.381 NK_cytokine L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 8.08e-01 0.0258 0.106 0.396 PB L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 7.64e-03 -0.323 0.119 0.396 PB L2
ENSG00000134644 PUM1 -546341 sc-eQTL 3.11e-01 -0.108 0.106 0.396 PB L2
ENSG00000162510 MATN1 -203935 sc-eQTL 1.89e-01 0.131 0.0988 0.396 PB L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 4.86e-02 0.139 0.0699 0.396 PB L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 8.79e-01 -0.0148 0.0973 0.396 PB L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 4.63e-01 -0.0761 0.103 0.396 PB L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.80e-01 -0.0745 0.0688 0.383 Pro_T L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.47e-01 0.127 0.0871 0.383 Pro_T L2
ENSG00000134644 PUM1 -546341 sc-eQTL 9.09e-01 -0.00936 0.0817 0.383 Pro_T L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 5.57e-01 -0.0344 0.0586 0.383 Pro_T L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 3.29e-01 -0.08 0.0817 0.383 Pro_T L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 4.99e-01 -0.0509 0.0752 0.383 Pro_T L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 6.64e-01 -0.0399 0.0915 0.382 Treg L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 2.94e-03 -0.261 0.0867 0.382 Treg L2
ENSG00000134644 PUM1 -546341 sc-eQTL 3.20e-01 -0.0705 0.0707 0.382 Treg L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.66e-01 -0.112 0.0808 0.382 Treg L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 9.84e-01 0.0017 0.0827 0.382 Treg L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 8.11e-01 -0.0198 0.0826 0.382 Treg L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 1.53e-01 -0.127 0.0884 0.383 cDC L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 8.68e-01 0.016 0.0962 0.383 cDC L2
ENSG00000134644 PUM1 -546341 sc-eQTL 3.55e-01 -0.0764 0.0825 0.383 cDC L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 8.17e-01 -0.0134 0.0579 0.383 cDC L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 6.60e-02 0.136 0.0737 0.383 cDC L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 7.41e-01 0.0242 0.0731 0.383 cDC L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 4.09e-01 -0.065 0.0785 0.383 cDC L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 5.96e-01 -0.0385 0.0726 0.382 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 5.42e-01 0.0495 0.081 0.382 cMono_IL1B L2
ENSG00000134644 PUM1 -546341 sc-eQTL 5.27e-01 -0.0348 0.0548 0.382 cMono_IL1B L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 4.48e-01 0.0366 0.0481 0.382 cMono_IL1B L2
ENSG00000162512 SDC3 -389108 sc-eQTL 7.42e-01 0.0299 0.0907 0.382 cMono_IL1B L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 2.06e-01 0.116 0.0914 0.382 cMono_IL1B L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 9.19e-01 0.00823 0.0811 0.382 cMono_IL1B L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.94e-02 0.137 0.0751 0.382 cMono_IL1B L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 6.46e-01 0.035 0.0762 0.382 cMono_S100A L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 6.64e-01 -0.0392 0.09 0.382 cMono_S100A L2
ENSG00000134644 PUM1 -546341 sc-eQTL 2.56e-01 0.0738 0.0649 0.382 cMono_S100A L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.07e-01 0.0511 0.0499 0.382 cMono_S100A L2
ENSG00000162512 SDC3 -389108 sc-eQTL 8.51e-01 -0.0163 0.0864 0.382 cMono_S100A L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 1.35e-01 0.136 0.091 0.382 cMono_S100A L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 7.05e-02 -0.134 0.0737 0.382 cMono_S100A L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.94e-02 0.135 0.074 0.382 cMono_S100A L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.17e-01 -0.0413 0.114 0.379 gdT L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.47e-01 0.00647 0.0977 0.379 gdT L2
ENSG00000134644 PUM1 -546341 sc-eQTL 9.56e-01 0.00557 0.101 0.379 gdT L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.87e-02 -0.255 0.107 0.379 gdT L2
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 3.06e-01 -0.103 0.101 0.379 gdT L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 7.58e-01 -0.0302 0.0978 0.379 gdT L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 9.45e-01 -0.0059 0.0853 0.384 intMono L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 6.95e-01 -0.0359 0.0917 0.384 intMono L2
ENSG00000134644 PUM1 -546341 sc-eQTL 4.00e-01 0.0655 0.0777 0.384 intMono L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.92e-01 0.0795 0.0608 0.384 intMono L2
ENSG00000162512 SDC3 -389108 sc-eQTL 6.50e-01 -0.038 0.0835 0.384 intMono L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 6.19e-01 0.0435 0.0874 0.384 intMono L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 7.74e-01 0.0238 0.0829 0.384 intMono L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 3.32e-01 0.0805 0.0827 0.384 intMono L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 6.00e-01 0.0418 0.0796 0.385 ncMono L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 2.10e-01 -0.106 0.0845 0.385 ncMono L2
ENSG00000134644 PUM1 -546341 sc-eQTL 4.46e-01 0.0529 0.0693 0.385 ncMono L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 1.04e-01 0.102 0.0626 0.385 ncMono L2
ENSG00000162512 SDC3 -389108 sc-eQTL 2.57e-01 -0.0801 0.0704 0.385 ncMono L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 4.92e-02 0.151 0.0763 0.385 ncMono L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 1.30e-02 0.19 0.0758 0.385 ncMono L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 2.74e-01 -0.0874 0.0796 0.385 ncMono L2
ENSG00000060688 SNRNP40 -777138 sc-eQTL 2.32e-01 0.111 0.0927 0.373 pDC L2
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 8.19e-01 -0.0234 0.102 0.373 pDC L2
ENSG00000134644 PUM1 -546341 sc-eQTL 4.47e-01 -0.0645 0.0846 0.373 pDC L2
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.63e-01 -0.0238 0.0788 0.373 pDC L2
ENSG00000168528 SERINC2 -889915 sc-eQTL 2.31e-01 -0.114 0.0951 0.373 pDC L2
ENSG00000284543 LINC01226 -986576 sc-eQTL 7.01e-01 -0.0286 0.0742 0.373 pDC L2
ENSG00000287510 AL137857.1 -212043 sc-eQTL 5.81e-01 0.0483 0.0872 0.373 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -777138 sc-eQTL 3.76e-01 0.0806 0.0908 0.382 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.30e-01 0.114 0.0753 0.382 B_Memory LOneK1K
ENSG00000134644 PUM1 -546341 sc-eQTL 9.02e-01 -0.00828 0.0671 0.382 B_Memory LOneK1K
ENSG00000162510 MATN1 -203935 sc-eQTL 1.72e-01 -0.104 0.0762 0.382 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -238124 sc-eQTL 2.70e-01 -0.053 0.0479 0.382 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 2.11e-01 0.0794 0.0633 0.382 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.46e-01 0.0319 0.0692 0.382 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -777138 sc-eQTL 1.75e-01 0.111 0.0818 0.382 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 4.07e-01 0.0539 0.0649 0.382 B_Naive LOneK1K
ENSG00000134644 PUM1 -546341 sc-eQTL 4.45e-01 -0.047 0.0614 0.382 B_Naive LOneK1K
ENSG00000162510 MATN1 -203935 sc-eQTL 2.50e-01 -0.0681 0.059 0.382 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -238124 sc-eQTL 6.51e-01 -0.0188 0.0416 0.382 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 1.00e+00 -3.33e-05 0.0538 0.382 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -212043 sc-eQTL 1.21e-02 0.159 0.063 0.382 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.39e-01 -0.023 0.0691 0.382 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 9.39e-01 0.00601 0.0783 0.382 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -546341 sc-eQTL 8.67e-01 -0.00838 0.0499 0.382 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -238124 sc-eQTL 3.08e-01 0.0447 0.0438 0.382 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -389108 sc-eQTL 7.09e-01 0.0335 0.0895 0.382 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -889915 sc-eQTL 1.56e-01 0.13 0.0917 0.382 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -986576 sc-eQTL 5.11e-01 -0.0497 0.0754 0.382 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -212043 sc-eQTL 9.35e-03 0.182 0.0696 0.382 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -777138 sc-eQTL 8.51e-01 -0.0143 0.0759 0.384 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 1.68e-01 -0.114 0.0827 0.384 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -546341 sc-eQTL 2.73e-01 0.0746 0.0679 0.384 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.69e-02 0.0961 0.054 0.384 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -389108 sc-eQTL 5.44e-01 -0.0483 0.0794 0.384 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -889915 sc-eQTL 4.86e-01 0.0575 0.0824 0.384 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -986576 sc-eQTL 1.21e-02 0.195 0.0771 0.384 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -212043 sc-eQTL 6.69e-01 -0.0335 0.0783 0.384 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -777138 sc-eQTL 7.76e-01 0.0241 0.0847 0.381 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -777332 sc-eQTL 7.55e-01 -0.0181 0.0579 0.381 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -546341 sc-eQTL 6.35e-01 -0.0301 0.0634 0.381 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -238124 sc-eQTL 7.49e-01 0.0227 0.0709 0.381 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -198854 sc-eQTL 2.04e-01 0.104 0.0814 0.381 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -212043 sc-eQTL 7.47e-01 0.0227 0.0705 0.381 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -744031 eQTL 0.0153 -0.0813 0.0335 0.00144 0.0 0.395

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina