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Genes within 1Mb (chr1:30518199:T:TGGAATGG):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.37e-01 0.0914 0.0771 0.38 B L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 3.00e-01 0.0642 0.0618 0.38 B L1
ENSG00000134644 PUM1 -547792 sc-eQTL 7.97e-01 0.0134 0.052 0.38 B L1
ENSG00000162510 MATN1 -205386 sc-eQTL 2.12e-01 -0.0682 0.0544 0.38 B L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.22e-01 -0.0152 0.0428 0.38 B L1
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 8.16e-01 0.0117 0.0501 0.38 B L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.25e-02 0.126 0.0587 0.38 B L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.27e-01 0.0325 0.0668 0.38 CD4T L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.92e-01 -0.0359 0.0522 0.38 CD4T L1
ENSG00000134644 PUM1 -547792 sc-eQTL 7.63e-01 -0.014 0.0465 0.38 CD4T L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.21e-01 -0.0631 0.0513 0.38 CD4T L1
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 5.55e-02 0.088 0.0457 0.38 CD4T L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.86e-01 0.073 0.055 0.38 CD4T L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.58e-01 -0.101 0.0891 0.38 CD8T L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.97e-01 -0.0767 0.0592 0.38 CD8T L1
ENSG00000134644 PUM1 -547792 sc-eQTL 9.88e-01 -0.000818 0.0524 0.38 CD8T L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.24e-02 -0.116 0.0502 0.38 CD8T L1
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 9.86e-01 0.00107 0.0596 0.38 CD8T L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 8.78e-01 0.0115 0.0749 0.38 CD8T L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 4.43e-01 -0.0605 0.0787 0.378 DC L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.66e-01 -0.00403 0.0934 0.378 DC L1
ENSG00000134644 PUM1 -547792 sc-eQTL 9.71e-02 -0.121 0.0726 0.378 DC L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.27e-01 -0.0183 0.0522 0.378 DC L1
ENSG00000168528 SERINC2 -891366 sc-eQTL 7.94e-02 0.151 0.0854 0.378 DC L1
ENSG00000284543 LINC01226 -988027 sc-eQTL 9.42e-01 0.00414 0.057 0.378 DC L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.04e-01 -0.0315 0.0826 0.378 DC L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 5.35e-01 -0.0374 0.0602 0.38 Mono L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 8.05e-01 -0.0184 0.0747 0.38 Mono L1
ENSG00000134644 PUM1 -547792 sc-eQTL 4.46e-01 0.0365 0.0478 0.38 Mono L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 8.65e-02 0.0753 0.0437 0.38 Mono L1
ENSG00000162512 SDC3 -390559 sc-eQTL 9.42e-01 0.00615 0.0847 0.38 Mono L1
ENSG00000168528 SERINC2 -891366 sc-eQTL 1.38e-01 0.134 0.0904 0.38 Mono L1
ENSG00000284543 LINC01226 -988027 sc-eQTL 6.17e-01 0.04 0.08 0.38 Mono L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.95e-02 0.143 0.0692 0.38 Mono L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.36e-01 0.0283 0.0838 0.38 NK L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.14e-01 0.00622 0.0574 0.38 NK L1
ENSG00000134644 PUM1 -547792 sc-eQTL 5.06e-01 -0.0401 0.0601 0.38 NK L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 8.05e-01 0.0172 0.0693 0.38 NK L1
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 2.67e-01 0.0864 0.0776 0.38 NK L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 4.78e-01 0.051 0.0718 0.38 NK L1
ENSG00000060688 SNRNP40 -778589 sc-eQTL 1.19e-01 0.0983 0.0628 0.38 Other_T L1
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 3.68e-01 0.0608 0.0674 0.38 Other_T L1
ENSG00000134644 PUM1 -547792 sc-eQTL 5.90e-01 0.0327 0.0606 0.38 Other_T L1
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.33e-01 -0.0746 0.0495 0.38 Other_T L1
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 7.45e-01 0.0265 0.0814 0.38 Other_T L1
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.35e-01 -0.127 0.0844 0.38 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -778589 sc-eQTL 1.44e-01 -0.146 0.0996 0.38 B_Activated L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 8.79e-02 0.172 0.1 0.38 B_Activated L2
ENSG00000134644 PUM1 -547792 sc-eQTL 7.30e-02 -0.168 0.0931 0.38 B_Activated L2
ENSG00000162510 MATN1 -205386 sc-eQTL 8.52e-02 0.141 0.0814 0.38 B_Activated L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 6.70e-01 0.0244 0.0572 0.38 B_Activated L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 8.81e-02 0.157 0.0916 0.38 B_Activated L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.74e-01 -0.0727 0.0816 0.38 B_Activated L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.22e-01 -0.0474 0.0961 0.38 B_Intermediate L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 5.04e-01 0.0535 0.08 0.38 B_Intermediate L2
ENSG00000134644 PUM1 -547792 sc-eQTL 1.58e-01 0.107 0.0752 0.38 B_Intermediate L2
ENSG00000162510 MATN1 -205386 sc-eQTL 1.79e-01 -0.106 0.0783 0.38 B_Intermediate L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.59e-01 -0.0283 0.0483 0.38 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 2.03e-01 0.0862 0.0675 0.38 B_Intermediate L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 2.24e-01 0.0922 0.0756 0.38 B_Intermediate L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.99e-02 0.189 0.0914 0.379 B_Memory L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.87e-01 0.0591 0.0849 0.379 B_Memory L2
ENSG00000134644 PUM1 -547792 sc-eQTL 3.67e-01 -0.0667 0.0739 0.379 B_Memory L2
ENSG00000162510 MATN1 -205386 sc-eQTL 1.30e-01 -0.107 0.0704 0.379 B_Memory L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 9.37e-01 0.00497 0.0627 0.379 B_Memory L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 7.81e-01 0.02 0.0718 0.379 B_Memory L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.64e-01 -0.117 0.0837 0.379 B_Memory L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 1.56e-01 0.12 0.0842 0.38 B_Naive1 L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 6.20e-02 0.136 0.0725 0.38 B_Naive1 L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.36e-01 -0.0305 0.0644 0.38 B_Naive1 L2
ENSG00000162510 MATN1 -205386 sc-eQTL 1.39e-01 -0.0965 0.065 0.38 B_Naive1 L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.54e-01 -0.0137 0.0437 0.38 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 3.63e-01 -0.0521 0.0573 0.38 B_Naive1 L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 4.00e-03 0.202 0.0695 0.38 B_Naive1 L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 9.11e-01 0.0102 0.0907 0.38 B_Naive2 L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.54e-01 -0.0561 0.0747 0.38 B_Naive2 L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.14e-01 0.0369 0.0732 0.38 B_Naive2 L2
ENSG00000162510 MATN1 -205386 sc-eQTL 5.09e-01 -0.0465 0.0702 0.38 B_Naive2 L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 3.58e-01 -0.0439 0.0477 0.38 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 1.07e-01 0.112 0.0691 0.38 B_Naive2 L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 8.18e-01 -0.0173 0.0751 0.38 B_Naive2 L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.31e-01 0.11 0.0915 0.384 CD4_CTL L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.86e-01 -0.0629 0.0902 0.384 CD4_CTL L2
ENSG00000134644 PUM1 -547792 sc-eQTL 4.15e-01 0.0722 0.0885 0.384 CD4_CTL L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.67e-01 0.109 0.0786 0.384 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 1.43e-01 -0.126 0.0859 0.384 CD4_CTL L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 9.25e-01 0.0072 0.0762 0.384 CD4_CTL L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 9.00e-01 -0.00886 0.0701 0.38 CD4_Naive L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.73e-01 0.00212 0.0622 0.38 CD4_Naive L2
ENSG00000134644 PUM1 -547792 sc-eQTL 4.21e-01 -0.04 0.0496 0.38 CD4_Naive L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.46e-01 -0.0617 0.053 0.38 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 1.07e-01 0.0869 0.0536 0.38 CD4_Naive L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.44e-01 0.0586 0.0619 0.38 CD4_Naive L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 9.68e-01 0.00347 0.0874 0.38 CD4_TCM L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 6.41e-01 -0.0328 0.0704 0.38 CD4_TCM L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.73e-01 -0.0263 0.0623 0.38 CD4_TCM L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.00e-01 -0.0349 0.0517 0.38 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 6.53e-02 0.121 0.0651 0.38 CD4_TCM L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 2.53e-01 0.0835 0.0729 0.38 CD4_TCM L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.19e-01 0.0318 0.0884 0.38 CD4_TEM L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 7.05e-01 -0.032 0.0842 0.38 CD4_TEM L2
ENSG00000134644 PUM1 -547792 sc-eQTL 7.62e-01 -0.0213 0.0702 0.38 CD4_TEM L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.58e-01 -0.1 0.0707 0.38 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 3.85e-01 0.0722 0.0829 0.38 CD4_TEM L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.63e-02 -0.171 0.081 0.38 CD4_TEM L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.03e-01 -0.0988 0.0958 0.38 CD8_CTL L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.21e-01 -0.0593 0.0735 0.38 CD8_CTL L2
ENSG00000134644 PUM1 -547792 sc-eQTL 9.53e-01 0.00421 0.0715 0.38 CD8_CTL L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 6.92e-01 -0.0314 0.0791 0.38 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 4.84e-02 0.164 0.0824 0.38 CD8_CTL L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.78e-01 -0.069 0.0781 0.38 CD8_CTL L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.52e-01 0.0402 0.0892 0.38 CD8_Naive L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 5.66e-02 -0.146 0.0763 0.38 CD8_Naive L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.29e-01 0.0299 0.0619 0.38 CD8_Naive L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.97e-02 -0.138 0.0586 0.38 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 6.45e-01 -0.0341 0.074 0.38 CD8_Naive L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 6.77e-01 -0.0337 0.0806 0.38 CD8_Naive L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 5.90e-01 -0.0527 0.0975 0.375 CD8_TCM L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.15e-01 -0.00951 0.0895 0.375 CD8_TCM L2
ENSG00000134644 PUM1 -547792 sc-eQTL 5.71e-01 -0.0477 0.084 0.375 CD8_TCM L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 8.86e-02 -0.15 0.0874 0.375 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 8.78e-02 0.139 0.0809 0.375 CD8_TCM L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.94e-01 0.107 0.082 0.375 CD8_TCM L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.11e-02 -0.2 0.092 0.368 CD8_TEM L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 5.14e-01 0.0583 0.0891 0.368 CD8_TEM L2
ENSG00000134644 PUM1 -547792 sc-eQTL 4.95e-01 0.0623 0.0911 0.368 CD8_TEM L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.40e-02 -0.153 0.0851 0.368 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 6.67e-03 -0.24 0.0874 0.368 CD8_TEM L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 8.28e-01 0.0175 0.0805 0.368 CD8_TEM L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.76e-01 0.102 0.0934 0.379 MAIT L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 5.87e-01 0.0451 0.0829 0.379 MAIT L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.85e-01 -0.0323 0.0795 0.379 MAIT L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.70e-01 -0.0827 0.0748 0.379 MAIT L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 6.04e-01 0.0434 0.0835 0.379 MAIT L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 8.41e-02 -0.148 0.0855 0.379 MAIT L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 5.63e-01 -0.0551 0.0951 0.382 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.54e-01 0.114 0.08 0.382 NK_CD56bright L2
ENSG00000134644 PUM1 -547792 sc-eQTL 8.18e-01 0.0195 0.0844 0.382 NK_CD56bright L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.18e-01 0.0538 0.0832 0.382 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 3.24e-01 -0.0826 0.0835 0.382 NK_CD56bright L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 2.63e-01 0.0922 0.0822 0.382 NK_CD56bright L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.95e-01 -0.0766 0.0898 0.379 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 8.76e-01 0.0104 0.0665 0.379 NK_CD56dim L2
ENSG00000134644 PUM1 -547792 sc-eQTL 6.94e-01 -0.0269 0.0682 0.379 NK_CD56dim L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.19e-01 -0.0262 0.0727 0.379 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 9.32e-01 -0.00782 0.0912 0.379 NK_CD56dim L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 6.37e-01 0.0355 0.0752 0.379 NK_CD56dim L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.30e-01 -0.0459 0.0952 0.377 NK_HLA L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 2.01e-01 0.109 0.0847 0.377 NK_HLA L2
ENSG00000134644 PUM1 -547792 sc-eQTL 9.32e-01 0.00708 0.0829 0.377 NK_HLA L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 6.16e-01 -0.0397 0.079 0.377 NK_HLA L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 8.50e-02 0.145 0.0835 0.377 NK_HLA L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 9.81e-02 0.134 0.0808 0.377 NK_HLA L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.93e-01 0.0746 0.0872 0.379 NK_cytokine L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 4.01e-01 -0.0573 0.068 0.379 NK_cytokine L2
ENSG00000134644 PUM1 -547792 sc-eQTL 5.84e-01 -0.0404 0.0736 0.379 NK_cytokine L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 4.23e-01 0.065 0.081 0.379 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 2.75e-01 0.0938 0.0857 0.379 NK_cytokine L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 6.88e-01 0.0322 0.08 0.379 NK_cytokine L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.12e-01 0.039 0.105 0.393 PB L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.01e-02 -0.311 0.119 0.393 PB L2
ENSG00000134644 PUM1 -547792 sc-eQTL 3.43e-01 -0.101 0.106 0.393 PB L2
ENSG00000162510 MATN1 -205386 sc-eQTL 2.76e-01 0.108 0.0985 0.393 PB L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 6.37e-02 0.131 0.0697 0.393 PB L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 9.92e-01 -0.00095 0.0969 0.393 PB L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 4.05e-01 -0.0859 0.103 0.393 PB L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.92e-01 -0.0726 0.0687 0.38 Pro_T L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.41e-01 0.129 0.087 0.38 Pro_T L2
ENSG00000134644 PUM1 -547792 sc-eQTL 9.04e-01 -0.00985 0.0816 0.38 Pro_T L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.39e-01 -0.0359 0.0585 0.38 Pro_T L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 3.20e-01 -0.0814 0.0816 0.38 Pro_T L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 4.77e-01 -0.0535 0.0751 0.38 Pro_T L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.35e-01 -0.031 0.0915 0.38 Treg L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 2.19e-03 -0.269 0.0866 0.38 Treg L2
ENSG00000134644 PUM1 -547792 sc-eQTL 2.99e-01 -0.0736 0.0707 0.38 Treg L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.09e-01 -0.13 0.0806 0.38 Treg L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 8.82e-01 0.0123 0.0827 0.38 Treg L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.27e-01 -0.0289 0.0825 0.38 Treg L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 1.48e-01 -0.128 0.0884 0.38 cDC L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.23e-01 0.00926 0.0962 0.38 cDC L2
ENSG00000134644 PUM1 -547792 sc-eQTL 3.84e-01 -0.072 0.0825 0.38 cDC L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.44e-01 -0.019 0.0579 0.38 cDC L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 6.86e-02 0.135 0.0737 0.38 cDC L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 7.25e-01 0.0257 0.073 0.38 cDC L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.43e-01 -0.0745 0.0785 0.38 cDC L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 5.57e-01 -0.0427 0.0725 0.38 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 5.32e-01 0.0507 0.0809 0.38 cMono_IL1B L2
ENSG00000134644 PUM1 -547792 sc-eQTL 5.88e-01 -0.0297 0.0547 0.38 cMono_IL1B L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 4.52e-01 0.0362 0.048 0.38 cMono_IL1B L2
ENSG00000162512 SDC3 -390559 sc-eQTL 6.27e-01 0.0441 0.0905 0.38 cMono_IL1B L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 2.36e-01 0.109 0.0914 0.38 cMono_IL1B L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 8.83e-01 0.012 0.081 0.38 cMono_IL1B L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 8.21e-02 0.131 0.0751 0.38 cMono_IL1B L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.05e-01 0.0394 0.0761 0.38 cMono_S100A L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 7.15e-01 -0.0328 0.09 0.38 cMono_S100A L2
ENSG00000134644 PUM1 -547792 sc-eQTL 2.83e-01 0.0698 0.0649 0.38 cMono_S100A L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.45e-01 0.058 0.0498 0.38 cMono_S100A L2
ENSG00000162512 SDC3 -390559 sc-eQTL 9.48e-01 -0.00561 0.0863 0.38 cMono_S100A L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 1.54e-01 0.13 0.091 0.38 cMono_S100A L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 6.81e-02 -0.135 0.0737 0.38 cMono_S100A L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.46e-02 0.133 0.074 0.38 cMono_S100A L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.71e-01 -0.0486 0.114 0.376 gdT L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.30e-01 -0.00859 0.098 0.376 gdT L2
ENSG00000134644 PUM1 -547792 sc-eQTL 9.81e-01 -0.00237 0.101 0.376 gdT L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.03e-02 -0.253 0.108 0.376 gdT L2
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 3.35e-01 -0.0977 0.101 0.376 gdT L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.41e-01 -0.0326 0.0982 0.376 gdT L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.64e-01 -0.0256 0.0853 0.382 intMono L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 7.02e-01 -0.0352 0.0916 0.382 intMono L2
ENSG00000134644 PUM1 -547792 sc-eQTL 3.53e-01 0.0722 0.0776 0.382 intMono L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 1.32e-01 0.0918 0.0607 0.382 intMono L2
ENSG00000162512 SDC3 -390559 sc-eQTL 6.46e-01 -0.0384 0.0835 0.382 intMono L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 6.58e-01 0.0388 0.0874 0.382 intMono L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 7.79e-01 0.0232 0.0829 0.382 intMono L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 3.01e-01 0.0857 0.0827 0.382 intMono L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 6.43e-01 0.0368 0.0794 0.382 ncMono L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.54e-01 -0.121 0.0843 0.382 ncMono L2
ENSG00000134644 PUM1 -547792 sc-eQTL 4.09e-01 0.0572 0.0691 0.382 ncMono L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 9.44e-02 0.105 0.0624 0.382 ncMono L2
ENSG00000162512 SDC3 -390559 sc-eQTL 3.28e-01 -0.0689 0.0703 0.382 ncMono L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 6.15e-02 0.143 0.0763 0.382 ncMono L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 1.66e-02 0.183 0.0758 0.382 ncMono L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 2.94e-01 -0.0836 0.0795 0.382 ncMono L2
ENSG00000060688 SNRNP40 -778589 sc-eQTL 2.42e-01 0.109 0.0928 0.37 pDC L2
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 8.84e-01 -0.0149 0.102 0.37 pDC L2
ENSG00000134644 PUM1 -547792 sc-eQTL 4.46e-01 -0.0646 0.0846 0.37 pDC L2
ENSG00000162511 LAPTM5 -239575 sc-eQTL 7.46e-01 -0.0255 0.0788 0.37 pDC L2
ENSG00000168528 SERINC2 -891366 sc-eQTL 2.56e-01 -0.109 0.0952 0.37 pDC L2
ENSG00000284543 LINC01226 -988027 sc-eQTL 7.75e-01 -0.0212 0.0742 0.37 pDC L2
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.27e-01 0.0305 0.0873 0.37 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -778589 sc-eQTL 3.36e-01 0.0876 0.0908 0.38 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.45e-01 0.11 0.0753 0.38 B_Memory LOneK1K
ENSG00000134644 PUM1 -547792 sc-eQTL 9.45e-01 -0.00462 0.0671 0.38 B_Memory LOneK1K
ENSG00000162510 MATN1 -205386 sc-eQTL 1.99e-01 -0.0982 0.0762 0.38 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.44e-01 -0.056 0.0479 0.38 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 1.40e-01 0.0938 0.0632 0.38 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -213494 sc-eQTL 6.84e-01 0.0283 0.0693 0.38 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -778589 sc-eQTL 1.98e-01 0.106 0.082 0.38 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 3.59e-01 0.0596 0.0649 0.38 B_Naive LOneK1K
ENSG00000134644 PUM1 -547792 sc-eQTL 5.43e-01 -0.0374 0.0615 0.38 B_Naive LOneK1K
ENSG00000162510 MATN1 -205386 sc-eQTL 2.46e-01 -0.0687 0.0591 0.38 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.89e-01 -0.0226 0.0417 0.38 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 9.29e-01 0.00481 0.0539 0.38 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.49e-02 0.155 0.0631 0.38 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.27e-01 -0.0241 0.069 0.38 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 9.03e-01 0.00955 0.0782 0.38 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -547792 sc-eQTL 8.89e-01 -0.00695 0.0499 0.38 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -239575 sc-eQTL 2.92e-01 0.0462 0.0437 0.38 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -390559 sc-eQTL 5.94e-01 0.0478 0.0894 0.38 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -891366 sc-eQTL 1.77e-01 0.124 0.0916 0.38 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -988027 sc-eQTL 5.37e-01 -0.0466 0.0753 0.38 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -213494 sc-eQTL 1.15e-02 0.177 0.0695 0.38 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.07e-01 -0.0286 0.076 0.381 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 1.49e-01 -0.12 0.0827 0.381 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -547792 sc-eQTL 2.51e-01 0.0782 0.0679 0.381 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -239575 sc-eQTL 5.59e-02 0.104 0.054 0.381 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -390559 sc-eQTL 6.62e-01 -0.0348 0.0796 0.381 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -891366 sc-eQTL 5.17e-01 0.0536 0.0825 0.381 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -988027 sc-eQTL 1.32e-02 0.193 0.0772 0.381 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -213494 sc-eQTL 7.39e-01 -0.0262 0.0784 0.381 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -778589 sc-eQTL 7.31e-01 0.0291 0.0847 0.379 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -778783 sc-eQTL 7.64e-01 -0.0174 0.0578 0.379 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -547792 sc-eQTL 6.77e-01 -0.0264 0.0634 0.379 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -239575 sc-eQTL 9.78e-01 0.00196 0.0708 0.379 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -200305 sc-eQTL 2.13e-01 0.102 0.0814 0.379 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -213494 sc-eQTL 9.28e-01 0.00637 0.0705 0.379 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -745482 eQTL 0.0188 -0.0786 0.0334 0.0013 0.0 0.393

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina