logo

Genes within 1Mb (chr1:30514839:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -781949 sc-eQTL 8.16e-01 -0.018 0.0769 0.459 B L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 5.69e-02 -0.117 0.0611 0.459 B L1
ENSG00000134644 PUM1 -551152 sc-eQTL 1.72e-01 -0.0705 0.0515 0.459 B L1
ENSG00000162510 MATN1 -208746 sc-eQTL 8.06e-01 0.0134 0.0544 0.459 B L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.74e-01 0.0578 0.0424 0.459 B L1
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 2.18e-02 0.114 0.0493 0.459 B L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 9.24e-01 0.00561 0.059 0.459 B L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.90e-01 -0.0453 0.0656 0.459 CD4T L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 8.46e-01 0.01 0.0513 0.459 CD4T L1
ENSG00000134644 PUM1 -551152 sc-eQTL 1.30e-01 -0.069 0.0455 0.459 CD4T L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.67e-02 0.084 0.0503 0.459 CD4T L1
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 5.94e-01 -0.0242 0.0453 0.459 CD4T L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 5.67e-01 -0.0311 0.0542 0.459 CD4T L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.99e-01 -0.0223 0.0874 0.459 CD8T L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.36e-02 0.104 0.0577 0.459 CD8T L1
ENSG00000134644 PUM1 -551152 sc-eQTL 8.73e-01 -0.00822 0.0512 0.459 CD8T L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.68e-02 0.0878 0.0494 0.459 CD8T L1
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 9.77e-01 0.00165 0.0583 0.459 CD8T L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 9.64e-02 0.122 0.0728 0.459 CD8T L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.25e-01 0.117 0.0759 0.462 DC L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 9.95e-01 -0.000533 0.0904 0.462 DC L1
ENSG00000134644 PUM1 -551152 sc-eQTL 9.09e-01 -0.00809 0.0708 0.462 DC L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 8.12e-01 0.0121 0.0506 0.462 DC L1
ENSG00000168528 SERINC2 -894726 sc-eQTL 5.86e-03 -0.228 0.0818 0.462 DC L1
ENSG00000284543 LINC01226 -991387 sc-eQTL 4.26e-01 -0.044 0.0552 0.462 DC L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 3.24e-02 0.17 0.0791 0.462 DC L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.16e-01 0.0932 0.0591 0.459 Mono L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.08e-01 -0.118 0.0732 0.459 Mono L1
ENSG00000134644 PUM1 -551152 sc-eQTL 9.83e-01 0.00099 0.0472 0.459 Mono L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.05e-01 0.00522 0.0435 0.459 Mono L1
ENSG00000162512 SDC3 -393919 sc-eQTL 7.83e-01 -0.023 0.0835 0.459 Mono L1
ENSG00000168528 SERINC2 -894726 sc-eQTL 9.47e-01 0.00599 0.0896 0.459 Mono L1
ENSG00000284543 LINC01226 -991387 sc-eQTL 8.90e-02 -0.134 0.0784 0.459 Mono L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 4.73e-02 -0.136 0.0684 0.459 Mono L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.23e-01 0.129 0.0833 0.459 NK L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 3.18e-01 -0.0573 0.0572 0.459 NK L1
ENSG00000134644 PUM1 -551152 sc-eQTL 3.87e-02 -0.124 0.0596 0.459 NK L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.42e-01 0.0228 0.0692 0.459 NK L1
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 4.40e-01 0.0601 0.0777 0.459 NK L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 9.17e-01 0.00753 0.0719 0.459 NK L1
ENSG00000060688 SNRNP40 -781949 sc-eQTL 8.00e-01 -0.016 0.063 0.459 Other_T L1
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 4.64e-02 -0.134 0.0667 0.459 Other_T L1
ENSG00000134644 PUM1 -551152 sc-eQTL 9.54e-01 0.0035 0.0605 0.459 Other_T L1
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.09e-01 0.0793 0.0493 0.459 Other_T L1
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 7.46e-01 -0.0263 0.0812 0.459 Other_T L1
ENSG00000287510 AL137857.1 -216854 sc-eQTL 1.28e-01 0.129 0.0841 0.459 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.46e-02 0.243 0.0984 0.462 B_Activated L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 6.36e-01 0.0478 0.101 0.462 B_Activated L2
ENSG00000134644 PUM1 -551152 sc-eQTL 9.89e-01 -0.00133 0.0938 0.462 B_Activated L2
ENSG00000162510 MATN1 -208746 sc-eQTL 6.53e-01 0.0369 0.0819 0.462 B_Activated L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 4.77e-01 0.0406 0.0571 0.462 B_Activated L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 2.88e-01 -0.098 0.092 0.462 B_Activated L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 3.14e-01 -0.0823 0.0814 0.462 B_Activated L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 5.61e-01 -0.0546 0.0938 0.457 B_Intermediate L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.63e-01 -0.109 0.0779 0.457 B_Intermediate L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.65e-01 0.054 0.0737 0.457 B_Intermediate L2
ENSG00000162510 MATN1 -208746 sc-eQTL 8.32e-01 -0.0163 0.0768 0.457 B_Intermediate L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.68e-01 0.0139 0.0471 0.457 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 4.87e-01 0.046 0.0661 0.457 B_Intermediate L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 8.32e-01 0.0157 0.074 0.457 B_Intermediate L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.75e-02 -0.158 0.0893 0.459 B_Memory L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 4.49e-01 -0.0628 0.0828 0.459 B_Memory L2
ENSG00000134644 PUM1 -551152 sc-eQTL 5.30e-01 0.0453 0.0721 0.459 B_Memory L2
ENSG00000162510 MATN1 -208746 sc-eQTL 3.58e-01 0.0634 0.0689 0.459 B_Memory L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 2.10e-01 0.0766 0.0609 0.459 B_Memory L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.92e-01 -0.0913 0.0697 0.459 B_Memory L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 8.00e-01 0.0208 0.082 0.459 B_Memory L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.00e-01 -0.0326 0.0847 0.459 B_Naive1 L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 6.27e-01 -0.0356 0.0731 0.459 B_Naive1 L2
ENSG00000134644 PUM1 -551152 sc-eQTL 2.66e-01 -0.0718 0.0644 0.459 B_Naive1 L2
ENSG00000162510 MATN1 -208746 sc-eQTL 8.31e-01 0.014 0.0655 0.459 B_Naive1 L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 6.29e-01 0.0211 0.0437 0.459 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.26e-01 0.0879 0.0572 0.459 B_Naive1 L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 8.74e-01 0.0112 0.071 0.459 B_Naive1 L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 3.66e-01 0.0806 0.089 0.461 B_Naive2 L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 8.65e-01 0.0125 0.0736 0.461 B_Naive2 L2
ENSG00000134644 PUM1 -551152 sc-eQTL 3.21e-01 -0.0715 0.0719 0.461 B_Naive2 L2
ENSG00000162510 MATN1 -208746 sc-eQTL 7.81e-01 0.0192 0.0691 0.461 B_Naive2 L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.28e-01 -0.00426 0.047 0.461 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 5.75e-02 0.13 0.0678 0.461 B_Naive2 L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.82e-01 0.0205 0.0739 0.461 B_Naive2 L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 8.25e-01 0.0196 0.0884 0.457 CD4_CTL L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 6.82e-01 -0.0356 0.087 0.457 CD4_CTL L2
ENSG00000134644 PUM1 -551152 sc-eQTL 3.97e-01 -0.0722 0.0852 0.457 CD4_CTL L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.05e-01 0.078 0.0758 0.457 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.12e-01 -0.132 0.0826 0.457 CD4_CTL L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 1.20e-01 -0.114 0.073 0.457 CD4_CTL L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 6.73e-01 -0.029 0.0685 0.459 CD4_Naive L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.16e-01 0.0953 0.0604 0.459 CD4_Naive L2
ENSG00000134644 PUM1 -551152 sc-eQTL 2.96e-02 -0.105 0.048 0.459 CD4_Naive L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.90e-01 0.068 0.0518 0.459 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 7.13e-01 -0.0194 0.0528 0.459 CD4_Naive L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.76e-01 -0.0173 0.0606 0.459 CD4_Naive L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.05e-01 0.0326 0.0859 0.459 CD4_TCM L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.35e-01 -0.103 0.0689 0.459 CD4_TCM L2
ENSG00000134644 PUM1 -551152 sc-eQTL 8.52e-01 -0.0114 0.0613 0.459 CD4_TCM L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.40e-01 0.0749 0.0506 0.459 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 9.01e-01 -0.00801 0.0645 0.459 CD4_TCM L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 2.74e-01 0.0786 0.0717 0.459 CD4_TCM L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 6.00e-01 -0.0453 0.0864 0.459 CD4_TEM L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 3.48e-01 -0.0773 0.0822 0.459 CD4_TEM L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.37e-01 -0.0533 0.0685 0.459 CD4_TEM L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 5.28e-01 0.0438 0.0693 0.459 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 4.52e-01 0.0611 0.0811 0.459 CD4_TEM L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 6.96e-01 0.0313 0.08 0.459 CD4_TEM L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.84e-01 -0.0658 0.0938 0.459 CD8_CTL L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 3.01e-01 0.0746 0.0718 0.459 CD8_CTL L2
ENSG00000134644 PUM1 -551152 sc-eQTL 6.67e-01 -0.0301 0.0699 0.459 CD8_CTL L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.39e-01 0.0259 0.0774 0.459 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 9.20e-01 0.0082 0.0814 0.459 CD8_CTL L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 1.30e-01 0.116 0.0762 0.459 CD8_CTL L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.22e-01 -0.0699 0.0869 0.459 CD8_Naive L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.64e-01 0.104 0.0747 0.459 CD8_Naive L2
ENSG00000134644 PUM1 -551152 sc-eQTL 6.12e-01 -0.0307 0.0603 0.459 CD8_Naive L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.11e-01 0.0586 0.0577 0.459 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.22e-01 0.112 0.0718 0.459 CD8_Naive L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 6.72e-01 -0.0333 0.0786 0.459 CD8_Naive L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 6.90e-01 0.0389 0.0973 0.477 CD8_TCM L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 8.46e-01 0.0174 0.0892 0.477 CD8_TCM L2
ENSG00000134644 PUM1 -551152 sc-eQTL 7.32e-01 0.0288 0.0838 0.477 CD8_TCM L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.42e-02 0.156 0.0871 0.477 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 9.25e-02 -0.136 0.0807 0.477 CD8_TCM L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 6.45e-01 0.0379 0.0821 0.477 CD8_TCM L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.42e-01 0.135 0.0918 0.461 CD8_TEM L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 5.70e-01 -0.0503 0.0884 0.461 CD8_TEM L2
ENSG00000134644 PUM1 -551152 sc-eQTL 6.30e-01 0.0436 0.0904 0.461 CD8_TEM L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.91e-01 0.0731 0.0849 0.461 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 6.89e-01 0.0353 0.0883 0.461 CD8_TEM L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 3.68e-01 0.0719 0.0798 0.461 CD8_TEM L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 9.69e-01 0.00366 0.0925 0.461 MAIT L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.74e-01 -0.0235 0.082 0.461 MAIT L2
ENSG00000134644 PUM1 -551152 sc-eQTL 9.36e-01 -0.00632 0.0786 0.461 MAIT L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.91e-01 0.0969 0.0738 0.461 MAIT L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 8.76e-01 -0.0129 0.0826 0.461 MAIT L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.45e-01 0.0277 0.0851 0.461 MAIT L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.58e-01 0.0693 0.0932 0.462 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.62e-01 -0.11 0.0785 0.462 NK_CD56bright L2
ENSG00000134644 PUM1 -551152 sc-eQTL 8.76e-01 -0.013 0.0828 0.462 NK_CD56bright L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.37e-01 -0.00644 0.0817 0.462 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 6.23e-01 0.0404 0.082 0.462 NK_CD56bright L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 5.22e-01 -0.0518 0.0808 0.462 NK_CD56bright L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 9.23e-02 0.149 0.0879 0.457 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 4.88e-01 -0.0454 0.0654 0.457 NK_CD56dim L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.59e-02 -0.134 0.0665 0.457 NK_CD56dim L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.93e-01 0.000607 0.0716 0.457 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.55e-01 0.127 0.0893 0.457 NK_CD56dim L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 9.21e-01 0.00732 0.074 0.457 NK_CD56dim L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 5.77e-01 -0.0517 0.0926 0.461 NK_HLA L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 9.88e-01 -0.00127 0.0827 0.461 NK_HLA L2
ENSG00000134644 PUM1 -551152 sc-eQTL 5.02e-02 -0.157 0.0798 0.461 NK_HLA L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.99e-01 0.0649 0.0768 0.461 NK_HLA L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 6.24e-01 -0.0401 0.0818 0.461 NK_HLA L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 5.74e-01 -0.0445 0.0791 0.461 NK_HLA L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 9.27e-01 -0.00791 0.0863 0.457 NK_cytokine L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 2.69e-01 -0.0745 0.0672 0.457 NK_cytokine L2
ENSG00000134644 PUM1 -551152 sc-eQTL 3.83e-01 -0.0636 0.0727 0.457 NK_cytokine L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.77e-01 0.00234 0.0802 0.457 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 5.64e-01 0.0491 0.0849 0.457 NK_cytokine L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.71e-01 0.0231 0.0791 0.457 NK_cytokine L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.18e-01 -0.156 0.0989 0.437 PB L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 5.32e-01 -0.0726 0.116 0.437 PB L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.16e-02 -0.204 0.0989 0.437 PB L2
ENSG00000162510 MATN1 -208746 sc-eQTL 7.50e-01 -0.03 0.0939 0.437 PB L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 6.74e-01 0.0283 0.067 0.437 PB L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 6.38e-02 0.169 0.0904 0.437 PB L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 6.01e-02 -0.183 0.0962 0.437 PB L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.32e-01 0.0534 0.0678 0.463 Pro_T L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 9.60e-01 0.00429 0.0862 0.463 Pro_T L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.48e-01 0.061 0.0803 0.463 Pro_T L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.78e-01 0.0775 0.0574 0.463 Pro_T L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.87e-01 0.106 0.0803 0.463 Pro_T L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 2.53e-01 0.0847 0.0739 0.463 Pro_T L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.52e-01 0.127 0.0886 0.459 Treg L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 2.89e-01 0.0914 0.0859 0.459 Treg L2
ENSG00000134644 PUM1 -551152 sc-eQTL 2.60e-01 0.0776 0.0687 0.459 Treg L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 4.28e-01 0.0626 0.0788 0.459 Treg L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 9.21e-01 0.00802 0.0804 0.459 Treg L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 5.16e-02 -0.156 0.0796 0.459 Treg L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.59e-01 0.126 0.0891 0.454 cDC L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 8.44e-01 0.0191 0.097 0.454 cDC L2
ENSG00000134644 PUM1 -551152 sc-eQTL 2.74e-01 0.0911 0.0831 0.454 cDC L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.01e-01 0.0225 0.0584 0.454 cDC L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 9.18e-02 -0.126 0.0744 0.454 cDC L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 8.49e-01 -0.014 0.0737 0.454 cDC L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 1.61e-01 0.111 0.0789 0.454 cDC L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.24e-01 0.0254 0.0717 0.459 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.70e-02 -0.19 0.0789 0.459 cMono_IL1B L2
ENSG00000134644 PUM1 -551152 sc-eQTL 7.66e-01 0.0161 0.0541 0.459 cMono_IL1B L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.59e-01 0.00245 0.0475 0.459 cMono_IL1B L2
ENSG00000162512 SDC3 -393919 sc-eQTL 1.90e-01 -0.117 0.0892 0.459 cMono_IL1B L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 8.26e-01 0.02 0.0906 0.459 cMono_IL1B L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 2.59e-01 -0.0905 0.0799 0.459 cMono_IL1B L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 4.65e-03 -0.21 0.0733 0.459 cMono_IL1B L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 4.80e-01 0.0535 0.0757 0.459 cMono_S100A L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 5.45e-01 -0.0542 0.0894 0.459 cMono_S100A L2
ENSG00000134644 PUM1 -551152 sc-eQTL 8.55e-01 -0.0118 0.0647 0.459 cMono_S100A L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 5.12e-01 -0.0326 0.0497 0.459 cMono_S100A L2
ENSG00000162512 SDC3 -393919 sc-eQTL 1.81e-01 0.115 0.0855 0.459 cMono_S100A L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 5.62e-01 -0.0528 0.0909 0.459 cMono_S100A L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 1.80e-01 -0.099 0.0736 0.459 cMono_S100A L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 1.89e-01 -0.0974 0.0739 0.459 cMono_S100A L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 3.66e-01 -0.104 0.115 0.488 gdT L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 9.35e-01 -0.00812 0.0993 0.488 gdT L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.15e-01 -0.0835 0.102 0.488 gdT L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.37e-01 0.107 0.111 0.488 gdT L2
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 3.04e-01 -0.106 0.102 0.488 gdT L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 5.34e-01 0.062 0.0993 0.488 gdT L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.23e-01 0.0298 0.084 0.467 intMono L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.67e-01 -0.0268 0.0903 0.467 intMono L2
ENSG00000134644 PUM1 -551152 sc-eQTL 8.52e-01 0.0143 0.0766 0.467 intMono L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 2.88e-01 0.0638 0.0599 0.467 intMono L2
ENSG00000162512 SDC3 -393919 sc-eQTL 9.08e-01 -0.00951 0.0823 0.467 intMono L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 3.20e-01 -0.0856 0.0859 0.467 intMono L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 9.58e-01 -0.00429 0.0816 0.467 intMono L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 8.90e-01 0.0113 0.0817 0.467 intMono L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 7.40e-01 0.026 0.0784 0.459 ncMono L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 1.30e-01 0.126 0.0831 0.459 ncMono L2
ENSG00000134644 PUM1 -551152 sc-eQTL 7.38e-01 0.0229 0.0683 0.459 ncMono L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 1.31e-01 0.0935 0.0617 0.459 ncMono L2
ENSG00000162512 SDC3 -393919 sc-eQTL 7.33e-01 0.0237 0.0695 0.459 ncMono L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 2.24e-01 -0.0922 0.0756 0.459 ncMono L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 3.47e-01 -0.0713 0.0757 0.459 ncMono L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.63e-01 -0.0238 0.0786 0.459 ncMono L2
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.05e-01 0.15 0.092 0.458 pDC L2
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 6.42e-02 -0.188 0.101 0.458 pDC L2
ENSG00000134644 PUM1 -551152 sc-eQTL 4.24e-01 -0.0675 0.0843 0.458 pDC L2
ENSG00000162511 LAPTM5 -242935 sc-eQTL 7.86e-01 0.0213 0.0785 0.458 pDC L2
ENSG00000168528 SERINC2 -894726 sc-eQTL 1.27e-01 -0.145 0.0945 0.458 pDC L2
ENSG00000284543 LINC01226 -991387 sc-eQTL 8.73e-01 -0.0118 0.0739 0.458 pDC L2
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.97e-01 0.0224 0.0869 0.458 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.58e-01 -0.124 0.0877 0.459 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 2.43e-01 -0.0856 0.0731 0.459 B_Memory LOneK1K
ENSG00000134644 PUM1 -551152 sc-eQTL 4.95e-01 0.0443 0.0649 0.459 B_Memory LOneK1K
ENSG00000162510 MATN1 -208746 sc-eQTL 2.97e-01 0.0773 0.0739 0.459 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -242935 sc-eQTL 3.50e-01 0.0436 0.0465 0.459 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 4.01e-01 -0.0517 0.0615 0.459 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -216854 sc-eQTL 9.26e-01 0.00627 0.0671 0.459 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -781949 sc-eQTL 6.15e-01 0.0412 0.0818 0.459 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.13e-01 -0.0239 0.0647 0.459 B_Naive LOneK1K
ENSG00000134644 PUM1 -551152 sc-eQTL 8.17e-02 -0.106 0.0608 0.459 B_Naive LOneK1K
ENSG00000162510 MATN1 -208746 sc-eQTL 7.22e-01 0.021 0.0589 0.459 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -242935 sc-eQTL 8.35e-01 0.00864 0.0415 0.459 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 1.90e-02 0.125 0.0529 0.459 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -216854 sc-eQTL 7.79e-01 -0.0179 0.0637 0.459 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -781949 sc-eQTL 2.27e-01 0.0823 0.068 0.459 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.86e-02 -0.136 0.0767 0.459 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -551152 sc-eQTL 9.87e-01 0.000828 0.0493 0.459 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -242935 sc-eQTL 9.04e-01 0.00524 0.0433 0.459 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -393919 sc-eQTL 8.97e-01 -0.0114 0.0884 0.459 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -894726 sc-eQTL 9.45e-01 0.00624 0.0909 0.459 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -991387 sc-eQTL 1.38e-01 -0.11 0.0741 0.459 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -216854 sc-eQTL 3.65e-03 -0.201 0.0684 0.459 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -781949 sc-eQTL 5.79e-01 0.0412 0.0743 0.459 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 7.14e-01 0.0299 0.0814 0.459 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -551152 sc-eQTL 7.87e-01 -0.0181 0.0667 0.459 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -242935 sc-eQTL 8.53e-02 0.0916 0.053 0.459 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -393919 sc-eQTL 9.41e-01 0.00575 0.0779 0.459 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -894726 sc-eQTL 3.53e-01 -0.0751 0.0806 0.459 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -991387 sc-eQTL 5.26e-01 -0.0487 0.0766 0.459 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -216854 sc-eQTL 6.50e-01 0.0349 0.0767 0.459 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -781949 sc-eQTL 1.34e-01 0.126 0.0839 0.457 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -782143 sc-eQTL 3.51e-01 -0.0537 0.0575 0.457 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -551152 sc-eQTL 8.80e-02 -0.107 0.0627 0.457 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -242935 sc-eQTL 6.63e-01 0.0308 0.0705 0.457 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -203665 sc-eQTL 2.24e-01 0.0988 0.0811 0.457 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -216854 sc-eQTL 8.12e-01 0.0167 0.0702 0.457 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -203665 eQTL 2.42e-02 0.028 0.0124 0.0 0.0 0.463

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -991442 2.69e-07 1.16e-07 3.72e-08 1.82e-07 9.01e-08 9.65e-08 1.44e-07 5.33e-08 1.44e-07 4.57e-08 1.62e-07 8.36e-08 1.41e-07 6.38e-08 6e-08 7.17e-08 3.9e-08 1.18e-07 5.36e-08 4.45e-08 1.05e-07 1.23e-07 1.32e-07 3.79e-08 1.32e-07 1.16e-07 1.08e-07 9.36e-08 1.05e-07 1.1e-07 9.91e-08 4.09e-08 3.3e-08 8.68e-08 8.76e-08 3.93e-08 5.02e-08 9.26e-08 6.56e-08 3.37e-08 4.94e-08 1.33e-07 4.7e-08 2.63e-08 5.19e-08 1.99e-08 1.19e-07 3.86e-09 4.85e-08