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Genes within 1Mb (chr1:30514486:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -782302 sc-eQTL 4.63e-01 0.0557 0.0757 0.451 B L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.51e-01 0.0697 0.0605 0.451 B L1
ENSG00000134644 PUM1 -551505 sc-eQTL 5.56e-01 0.03 0.0509 0.451 B L1
ENSG00000162510 MATN1 -209099 sc-eQTL 2.52e-01 -0.0614 0.0534 0.451 B L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 3.32e-01 -0.0407 0.0419 0.451 B L1
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 4.24e-02 -0.0994 0.0487 0.451 B L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 7.71e-01 -0.017 0.0582 0.451 B L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 5.27e-01 0.041 0.0646 0.451 CD4T L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 5.00e-01 0.0341 0.0505 0.451 CD4T L1
ENSG00000134644 PUM1 -551505 sc-eQTL 2.60e-02 0.0997 0.0445 0.451 CD4T L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 3.29e-01 -0.0486 0.0498 0.451 CD4T L1
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.20e-01 0.016 0.0446 0.451 CD4T L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 4.34e-01 0.0418 0.0534 0.451 CD4T L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.90e-01 -0.0228 0.0854 0.451 CD8T L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 1.32e-01 -0.0855 0.0565 0.451 CD8T L1
ENSG00000134644 PUM1 -551505 sc-eQTL 2.45e-01 0.0582 0.0499 0.451 CD8T L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 2.07e-01 -0.0614 0.0484 0.451 CD8T L1
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 6.05e-01 -0.0295 0.0569 0.451 CD8T L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.58e-01 -0.101 0.0712 0.451 CD8T L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 5.44e-02 -0.143 0.074 0.453 DC L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 8.24e-01 -0.0197 0.0885 0.453 DC L1
ENSG00000134644 PUM1 -551505 sc-eQTL 6.26e-01 0.0338 0.0693 0.453 DC L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.21e-01 0.0398 0.0494 0.453 DC L1
ENSG00000168528 SERINC2 -895079 sc-eQTL 2.26e-03 0.247 0.0797 0.453 DC L1
ENSG00000284543 LINC01226 -991740 sc-eQTL 4.15e-01 0.0441 0.054 0.453 DC L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 2.06e-01 -0.0989 0.078 0.453 DC L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 1.67e-01 -0.0815 0.0588 0.451 Mono L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 1.59e-01 0.103 0.0729 0.451 Mono L1
ENSG00000134644 PUM1 -551505 sc-eQTL 7.52e-01 -0.0148 0.0469 0.451 Mono L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 6.48e-01 0.0197 0.0432 0.451 Mono L1
ENSG00000162512 SDC3 -394272 sc-eQTL 8.37e-01 -0.0171 0.083 0.451 Mono L1
ENSG00000168528 SERINC2 -895079 sc-eQTL 9.98e-01 -0.000206 0.0891 0.451 Mono L1
ENSG00000284543 LINC01226 -991740 sc-eQTL 1.09e-02 0.198 0.0773 0.451 Mono L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.38e-01 0.0423 0.0685 0.451 Mono L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 4.12e-01 -0.0682 0.0829 0.451 NK L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.72e-01 0.0507 0.0568 0.451 NK L1
ENSG00000134644 PUM1 -551505 sc-eQTL 1.52e-01 0.0854 0.0594 0.451 NK L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.01e-01 0.00859 0.0686 0.451 NK L1
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 8.25e-01 0.0171 0.0771 0.451 NK L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 6.94e-01 -0.0281 0.0712 0.451 NK L1
ENSG00000060688 SNRNP40 -782302 sc-eQTL 9.54e-01 -0.00358 0.0624 0.451 Other_T L1
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 4.00e-02 0.137 0.0661 0.451 Other_T L1
ENSG00000134644 PUM1 -551505 sc-eQTL 8.35e-01 0.0125 0.06 0.451 Other_T L1
ENSG00000162511 LAPTM5 -243288 sc-eQTL 1.33e-01 -0.0737 0.0489 0.451 Other_T L1
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 8.66e-01 0.0136 0.0806 0.451 Other_T L1
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.97e-02 -0.195 0.0828 0.451 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -782302 sc-eQTL 2.15e-01 -0.122 0.0981 0.436 B_Activated L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 4.74e-01 -0.0713 0.0993 0.436 B_Activated L2
ENSG00000134644 PUM1 -551505 sc-eQTL 8.91e-01 0.0126 0.0924 0.436 B_Activated L2
ENSG00000162510 MATN1 -209099 sc-eQTL 7.18e-01 0.0291 0.0807 0.436 B_Activated L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 1.54e-01 -0.0801 0.056 0.436 B_Activated L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 3.32e-01 0.0882 0.0907 0.436 B_Activated L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.62e-01 0.0733 0.0802 0.436 B_Activated L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 2.23e-01 0.112 0.0913 0.453 B_Intermediate L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.04e-01 0.0785 0.0762 0.453 B_Intermediate L2
ENSG00000134644 PUM1 -551505 sc-eQTL 4.15e-01 -0.0588 0.0719 0.453 B_Intermediate L2
ENSG00000162510 MATN1 -209099 sc-eQTL 8.24e-01 -0.0167 0.075 0.453 B_Intermediate L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 6.88e-01 -0.0185 0.046 0.453 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 2.73e-01 -0.0708 0.0644 0.453 B_Intermediate L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.59e-01 -0.0663 0.0721 0.453 B_Intermediate L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 2.75e-01 0.0965 0.0881 0.453 B_Memory L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.24e-01 0.0803 0.0812 0.453 B_Memory L2
ENSG00000134644 PUM1 -551505 sc-eQTL 9.63e-01 -0.00333 0.0709 0.453 B_Memory L2
ENSG00000162510 MATN1 -209099 sc-eQTL 4.79e-01 -0.048 0.0677 0.453 B_Memory L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 6.79e-01 -0.0249 0.0601 0.453 B_Memory L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 4.32e-01 0.0541 0.0687 0.453 B_Memory L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 4.40e-01 -0.0623 0.0804 0.453 B_Memory L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 6.54e-01 0.0371 0.0828 0.451 B_Naive1 L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 6.15e-01 -0.036 0.0715 0.451 B_Naive1 L2
ENSG00000134644 PUM1 -551505 sc-eQTL 8.78e-01 0.00973 0.0631 0.451 B_Naive1 L2
ENSG00000162510 MATN1 -209099 sc-eQTL 1.64e-01 -0.0891 0.0638 0.451 B_Naive1 L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.70e-01 0.00159 0.0428 0.451 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 3.21e-01 -0.0558 0.0561 0.451 B_Naive1 L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 8.84e-01 -0.0101 0.0694 0.451 B_Naive1 L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 4.38e-01 0.0685 0.088 0.451 B_Naive2 L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 6.43e-01 -0.0337 0.0728 0.451 B_Naive2 L2
ENSG00000134644 PUM1 -551505 sc-eQTL 5.51e-01 0.0425 0.0712 0.451 B_Naive2 L2
ENSG00000162510 MATN1 -209099 sc-eQTL 7.94e-01 -0.0179 0.0684 0.451 B_Naive2 L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.31e-01 0.004 0.0464 0.451 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 3.03e-01 -0.0696 0.0675 0.451 B_Naive2 L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 4.07e-01 -0.0606 0.0729 0.451 B_Naive2 L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.19e-01 0.0313 0.0869 0.452 CD4_CTL L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 9.04e-01 0.0103 0.0855 0.452 CD4_CTL L2
ENSG00000134644 PUM1 -551505 sc-eQTL 4.64e-03 0.235 0.0822 0.452 CD4_CTL L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 5.54e-01 -0.0443 0.0747 0.452 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 1.19e-01 0.127 0.0813 0.452 CD4_CTL L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.70e-01 0.0988 0.0718 0.452 CD4_CTL L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.32e-01 0.0144 0.0678 0.451 CD4_Naive L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 5.92e-01 -0.0322 0.0601 0.451 CD4_Naive L2
ENSG00000134644 PUM1 -551505 sc-eQTL 2.06e-02 0.111 0.0474 0.451 CD4_Naive L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 3.41e-01 -0.049 0.0513 0.451 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 5.90e-01 0.0281 0.0522 0.451 CD4_Naive L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 8.72e-01 0.00966 0.0599 0.451 CD4_Naive L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 4.22e-01 0.0679 0.0844 0.451 CD4_TCM L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.81e-01 0.0735 0.0679 0.451 CD4_TCM L2
ENSG00000134644 PUM1 -551505 sc-eQTL 5.84e-01 0.0331 0.0603 0.451 CD4_TCM L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.14e-01 -0.0054 0.05 0.451 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 4.08e-01 -0.0525 0.0634 0.451 CD4_TCM L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 6.14e-01 -0.0357 0.0707 0.451 CD4_TCM L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.30e-01 0.0293 0.0848 0.451 CD4_TEM L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 1.55e-01 0.115 0.0804 0.451 CD4_TEM L2
ENSG00000134644 PUM1 -551505 sc-eQTL 3.45e-01 0.0636 0.0672 0.451 CD4_TEM L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.46e-01 -0.00461 0.0681 0.451 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 9.18e-01 0.00821 0.0797 0.451 CD4_TEM L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.00e-01 -0.053 0.0784 0.451 CD4_TEM L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.59e-01 -0.0282 0.0917 0.451 CD8_CTL L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.78e-01 -0.0762 0.0701 0.451 CD8_CTL L2
ENSG00000134644 PUM1 -551505 sc-eQTL 9.97e-01 0.000217 0.0683 0.451 CD8_CTL L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 7.52e-01 -0.0239 0.0756 0.451 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 6.85e-01 -0.0322 0.0795 0.451 CD8_CTL L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 2.09e-01 -0.0939 0.0745 0.451 CD8_CTL L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 4.02e-01 0.0717 0.0854 0.451 CD8_Naive L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 1.99e-01 -0.0946 0.0734 0.451 CD8_Naive L2
ENSG00000134644 PUM1 -551505 sc-eQTL 1.35e-01 0.0885 0.059 0.451 CD8_Naive L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 8.98e-01 0.00732 0.0569 0.451 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 6.63e-01 -0.0309 0.071 0.451 CD8_Naive L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 6.14e-01 0.039 0.0772 0.451 CD8_Naive L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.62e-01 -0.0872 0.0954 0.435 CD8_TCM L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 9.72e-01 -0.00306 0.0877 0.435 CD8_TCM L2
ENSG00000134644 PUM1 -551505 sc-eQTL 7.17e-01 -0.0299 0.0824 0.435 CD8_TCM L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 2.56e-01 -0.0981 0.086 0.435 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 2.73e-01 0.0875 0.0796 0.435 CD8_TCM L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 2.63e-01 -0.0904 0.0805 0.435 CD8_TCM L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 6.66e-01 -0.0391 0.0905 0.452 CD8_TEM L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 5.33e-01 -0.0542 0.0867 0.452 CD8_TEM L2
ENSG00000134644 PUM1 -551505 sc-eQTL 4.77e-01 -0.0631 0.0886 0.452 CD8_TEM L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.67e-01 -0.0608 0.0833 0.452 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 8.95e-01 0.0114 0.0866 0.452 CD8_TEM L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.52e-01 -0.0467 0.0783 0.452 CD8_TEM L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.29e-01 -0.0195 0.09 0.45 MAIT L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 4.13e-01 0.0653 0.0796 0.45 MAIT L2
ENSG00000134644 PUM1 -551505 sc-eQTL 9.26e-01 0.00708 0.0764 0.45 MAIT L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 3.97e-01 -0.0611 0.072 0.45 MAIT L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 5.49e-01 0.0481 0.0802 0.45 MAIT L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.49e-01 -0.0774 0.0826 0.45 MAIT L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.74e-01 0.0146 0.0919 0.449 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.67e-01 0.0701 0.0775 0.449 NK_CD56bright L2
ENSG00000134644 PUM1 -551505 sc-eQTL 5.42e-01 0.0498 0.0815 0.449 NK_CD56bright L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.39e-01 0.0623 0.0803 0.449 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 8.36e-01 -0.0167 0.0809 0.449 NK_CD56bright L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 6.35e-01 0.0378 0.0796 0.449 NK_CD56bright L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.90e-01 -0.0755 0.0877 0.453 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 6.15e-01 0.0327 0.0649 0.453 NK_CD56dim L2
ENSG00000134644 PUM1 -551505 sc-eQTL 3.06e-01 0.0682 0.0665 0.453 NK_CD56dim L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 8.88e-01 0.01 0.0711 0.453 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 4.78e-01 -0.0632 0.0889 0.453 NK_CD56dim L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.35e-01 -0.11 0.073 0.453 NK_CD56dim L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.32e-01 0.0314 0.0915 0.45 NK_HLA L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 7.58e-01 -0.0252 0.0817 0.45 NK_HLA L2
ENSG00000134644 PUM1 -551505 sc-eQTL 1.97e-01 0.103 0.0793 0.45 NK_HLA L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 6.24e-01 -0.0373 0.0759 0.45 NK_HLA L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 6.16e-01 0.0406 0.0808 0.45 NK_HLA L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.27e-01 -0.0766 0.078 0.45 NK_HLA L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 7.97e-01 0.022 0.0855 0.453 NK_cytokine L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 4.93e-01 0.0458 0.0667 0.453 NK_cytokine L2
ENSG00000134644 PUM1 -551505 sc-eQTL 2.25e-01 0.0875 0.0719 0.453 NK_cytokine L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.26e-01 -0.00738 0.0795 0.453 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.94e-01 -0.022 0.0842 0.453 NK_cytokine L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 7.41e-01 -0.0259 0.0784 0.453 NK_cytokine L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 5.37e-01 0.0642 0.104 0.47 PB L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 7.87e-01 0.0326 0.12 0.47 PB L2
ENSG00000134644 PUM1 -551505 sc-eQTL 2.45e-01 0.121 0.104 0.47 PB L2
ENSG00000162510 MATN1 -209099 sc-eQTL 5.60e-01 0.0569 0.0973 0.47 PB L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.26e-01 -0.0065 0.0696 0.47 PB L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.71e-02 -0.168 0.094 0.47 PB L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 2.63e-01 0.113 0.101 0.47 PB L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 6.44e-01 -0.031 0.0671 0.446 Pro_T L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 4.70e-01 0.0617 0.0851 0.446 Pro_T L2
ENSG00000134644 PUM1 -551505 sc-eQTL 1.68e-01 -0.109 0.0791 0.446 Pro_T L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.92e-02 -0.0938 0.0567 0.446 Pro_T L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 1.71e-01 -0.109 0.0793 0.446 Pro_T L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.10e-01 -0.117 0.0728 0.446 Pro_T L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 6.73e-02 -0.159 0.0866 0.451 Treg L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.45e-01 -0.0799 0.0843 0.451 Treg L2
ENSG00000134644 PUM1 -551505 sc-eQTL 6.60e-01 -0.0298 0.0676 0.451 Treg L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 5.22e-01 -0.0496 0.0773 0.451 Treg L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 5.85e-01 0.0431 0.0788 0.451 Treg L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.73e-01 0.0444 0.0787 0.451 Treg L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 2.71e-01 -0.0988 0.0895 0.459 cDC L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 8.99e-01 -0.0123 0.0972 0.459 cDC L2
ENSG00000134644 PUM1 -551505 sc-eQTL 5.39e-01 -0.0513 0.0834 0.459 cDC L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 6.04e-01 0.0304 0.0585 0.459 cDC L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 1.65e-01 0.104 0.0748 0.459 cDC L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 4.65e-01 0.054 0.0737 0.459 cDC L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 4.57e-01 -0.0592 0.0794 0.459 cDC L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 9.54e-01 0.00416 0.0715 0.451 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 7.16e-02 0.143 0.0792 0.451 cMono_IL1B L2
ENSG00000134644 PUM1 -551505 sc-eQTL 7.84e-01 -0.0149 0.054 0.451 cMono_IL1B L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.00e-01 0.00598 0.0474 0.451 cMono_IL1B L2
ENSG00000162512 SDC3 -394272 sc-eQTL 5.25e-01 0.0568 0.0892 0.451 cMono_IL1B L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 7.21e-01 -0.0323 0.0904 0.451 cMono_IL1B L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 6.44e-02 0.147 0.0793 0.451 cMono_IL1B L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.33e-01 0.112 0.0741 0.451 cMono_IL1B L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.42e-01 -0.015 0.0751 0.451 cMono_S100A L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.40e-01 0.104 0.0885 0.451 cMono_S100A L2
ENSG00000134644 PUM1 -551505 sc-eQTL 7.10e-01 0.0239 0.0641 0.451 cMono_S100A L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.60e-01 0.0364 0.0493 0.451 cMono_S100A L2
ENSG00000162512 SDC3 -394272 sc-eQTL 1.68e-01 -0.117 0.0848 0.451 cMono_S100A L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 4.77e-01 0.0642 0.0901 0.451 cMono_S100A L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 5.58e-02 0.14 0.0726 0.451 cMono_S100A L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 4.50e-01 0.0556 0.0735 0.451 cMono_S100A L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.74e-01 -0.0177 0.111 0.433 gdT L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 9.19e-01 0.00968 0.0952 0.433 gdT L2
ENSG00000134644 PUM1 -551505 sc-eQTL 6.12e-01 0.0499 0.098 0.433 gdT L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 8.47e-01 -0.0206 0.107 0.433 gdT L2
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 8.47e-01 0.0191 0.0984 0.433 gdT L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.97e-01 -0.123 0.0948 0.433 gdT L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.56e-01 0.0152 0.0839 0.44 intMono L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 9.14e-01 0.00976 0.0902 0.44 intMono L2
ENSG00000134644 PUM1 -551505 sc-eQTL 5.53e-01 -0.0455 0.0765 0.44 intMono L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.83e-01 -0.0422 0.06 0.44 intMono L2
ENSG00000162512 SDC3 -394272 sc-eQTL 8.86e-01 0.0118 0.0822 0.44 intMono L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 3.34e-01 0.0832 0.0858 0.44 intMono L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 7.30e-01 0.0281 0.0815 0.44 intMono L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 6.04e-01 -0.0423 0.0815 0.44 intMono L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.00e-01 -0.0785 0.0756 0.45 ncMono L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 1.31e-02 -0.199 0.0795 0.45 ncMono L2
ENSG00000134644 PUM1 -551505 sc-eQTL 8.63e-01 -0.0114 0.066 0.45 ncMono L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 2.39e-01 -0.0705 0.0597 0.45 ncMono L2
ENSG00000162512 SDC3 -394272 sc-eQTL 4.19e-01 -0.0543 0.0671 0.45 ncMono L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 2.57e-01 0.0832 0.0731 0.45 ncMono L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 3.95e-01 0.0624 0.0732 0.45 ncMono L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 7.60e-01 -0.0232 0.076 0.45 ncMono L2
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.49e-02 -0.187 0.088 0.452 pDC L2
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 6.02e-02 0.183 0.0969 0.452 pDC L2
ENSG00000134644 PUM1 -551505 sc-eQTL 1.51e-01 0.117 0.0807 0.452 pDC L2
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.49e-01 0.0573 0.0754 0.452 pDC L2
ENSG00000168528 SERINC2 -895079 sc-eQTL 1.67e-01 0.127 0.0911 0.452 pDC L2
ENSG00000284543 LINC01226 -991740 sc-eQTL 9.96e-01 -0.000314 0.0711 0.452 pDC L2
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.69e-01 -0.0477 0.0836 0.452 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -782302 sc-eQTL 8.25e-02 0.15 0.086 0.451 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.24e-01 0.0877 0.0718 0.451 B_Memory LOneK1K
ENSG00000134644 PUM1 -551505 sc-eQTL 9.87e-01 -0.00104 0.0639 0.451 B_Memory LOneK1K
ENSG00000162510 MATN1 -209099 sc-eQTL 4.67e-01 -0.053 0.0727 0.451 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -243288 sc-eQTL 4.73e-01 -0.0328 0.0457 0.451 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.25e-01 0.0213 0.0605 0.451 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -217207 sc-eQTL 5.72e-01 -0.0373 0.0659 0.451 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -782302 sc-eQTL 9.22e-01 0.00787 0.0804 0.451 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 6.29e-01 -0.0308 0.0635 0.451 B_Naive LOneK1K
ENSG00000134644 PUM1 -551505 sc-eQTL 4.24e-01 0.0481 0.0601 0.451 B_Naive LOneK1K
ENSG00000162510 MATN1 -209099 sc-eQTL 1.86e-01 -0.0765 0.0577 0.451 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -243288 sc-eQTL 7.89e-01 0.0109 0.0408 0.451 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.31e-02 -0.0941 0.0522 0.451 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -217207 sc-eQTL 9.32e-01 0.00537 0.0625 0.451 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.92e-01 -0.0581 0.0677 0.451 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 7.03e-02 0.139 0.0762 0.451 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -551505 sc-eQTL 8.47e-01 -0.00947 0.049 0.451 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -243288 sc-eQTL 7.98e-01 0.0111 0.0431 0.451 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -394272 sc-eQTL 9.03e-01 -0.0108 0.0878 0.451 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -895079 sc-eQTL 9.16e-01 -0.00953 0.0904 0.451 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -991740 sc-eQTL 2.48e-02 0.165 0.0732 0.451 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -217207 sc-eQTL 1.02e-01 0.113 0.0689 0.451 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.81e-01 -0.0644 0.0733 0.45 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 2.40e-01 -0.0944 0.0801 0.45 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -551505 sc-eQTL 8.91e-01 0.00901 0.0658 0.45 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -243288 sc-eQTL 2.78e-01 -0.0571 0.0525 0.45 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -394272 sc-eQTL 7.57e-01 -0.0239 0.0769 0.45 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -895079 sc-eQTL 2.92e-01 0.0841 0.0795 0.45 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -991740 sc-eQTL 4.53e-01 0.0568 0.0756 0.45 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.39e-01 -0.0725 0.0756 0.45 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -782302 sc-eQTL 3.91e-01 -0.0717 0.0835 0.453 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -782496 sc-eQTL 3.46e-01 0.0539 0.057 0.453 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -551505 sc-eQTL 2.58e-01 0.0707 0.0624 0.453 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -243288 sc-eQTL 9.25e-01 -0.00662 0.0699 0.453 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -204018 sc-eQTL 7.98e-01 -0.0206 0.0806 0.453 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -217207 sc-eQTL 3.07e-01 -0.0711 0.0694 0.453 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000134644 \N -551505 3.62e-07 1.78e-07 7.72e-08 3.61e-07 1.11e-07 8.89e-08 2.16e-07 5.68e-08 1.94e-07 9.35e-08 2.04e-07 1.15e-07 3.48e-07 8.54e-08 6.2e-08 9.01e-08 4.45e-08 2.04e-07 9.69e-08 8.52e-08 1.26e-07 1.76e-07 1.75e-07 3.41e-08 2.28e-07 1.26e-07 1.39e-07 1.28e-07 1.26e-07 2.1e-07 1.39e-07 4.23e-08 3.51e-08 1.27e-07 2.15e-07 6.23e-08 6.48e-08 6.98e-08 4.74e-08 5.64e-08 5e-08 1.55e-07 6.04e-08 1.76e-08 8.45e-08 1.29e-08 1.2e-07 0.0 4.68e-08
ENSG00000284543 \N -991795 2.61e-07 1.1e-07 3.88e-08 1.83e-07 9.21e-08 9.57e-08 1.41e-07 5.49e-08 1.4e-07 4.38e-08 1.6e-07 8.03e-08 1.33e-07 6.21e-08 5.53e-08 7.5e-08 4.94e-08 1.14e-07 5.36e-08 4.2e-08 1.04e-07 1.28e-07 1.26e-07 4.16e-08 1.31e-07 1.13e-07 1.08e-07 8.71e-08 9.97e-08 1.1e-07 9.73e-08 3.71e-08 2.74e-08 8.34e-08 8.21e-08 3.94e-08 5.03e-08 9.68e-08 7.47e-08 3.98e-08 3.84e-08 1.36e-07 5.39e-08 1.32e-08 5.7e-08 1.87e-08 1.26e-07 4.09e-09 4.73e-08