logo

Genes within 1Mb (chr1:30507919:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.62e-01 0.00397 0.0826 0.622 B L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.86e-01 0.0267 0.0661 0.622 B L1
ENSG00000134644 PUM1 -558072 sc-eQTL 3.68e-01 0.0499 0.0554 0.622 B L1
ENSG00000162510 MATN1 -215666 sc-eQTL 3.56e-01 -0.0538 0.0582 0.622 B L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 3.59e-01 -0.0419 0.0456 0.622 B L1
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 7.94e-02 -0.0937 0.0532 0.622 B L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 8.10e-01 -0.0153 0.0634 0.622 B L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 4.58e-01 0.0525 0.0706 0.622 CD4T L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.23e-01 -0.0547 0.0551 0.622 CD4T L1
ENSG00000134644 PUM1 -558072 sc-eQTL 5.27e-02 0.095 0.0488 0.622 CD4T L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.24e-01 -0.0436 0.0544 0.622 CD4T L1
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 8.70e-01 -0.00798 0.0488 0.622 CD4T L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 5.96e-01 -0.031 0.0584 0.622 CD4T L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.81e-01 0.00221 0.0929 0.622 CD8T L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 4.39e-01 -0.0479 0.0617 0.622 CD8T L1
ENSG00000134644 PUM1 -558072 sc-eQTL 7.81e-01 0.0151 0.0544 0.622 CD8T L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.10e-01 -0.0349 0.0528 0.622 CD8T L1
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 9.03e-01 -0.00755 0.062 0.622 CD8T L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 7.95e-02 -0.136 0.0773 0.622 CD8T L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.08e-02 -0.137 0.0807 0.622 DC L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 9.15e-01 -0.0103 0.0963 0.622 DC L1
ENSG00000134644 PUM1 -558072 sc-eQTL 8.76e-01 0.0117 0.0754 0.622 DC L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 3.62e-01 0.0491 0.0537 0.622 DC L1
ENSG00000168528 SERINC2 -901646 sc-eQTL 4.86e-02 0.174 0.0879 0.622 DC L1
ENSG00000284543 LINC01226 -998307 sc-eQTL 3.16e-01 0.059 0.0587 0.622 DC L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.50e-01 -0.122 0.0847 0.622 DC L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 1.92e-01 -0.0832 0.0636 0.622 Mono L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.46e-01 0.0363 0.0791 0.622 Mono L1
ENSG00000134644 PUM1 -558072 sc-eQTL 7.63e-01 -0.0153 0.0507 0.622 Mono L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 8.13e-01 0.011 0.0466 0.622 Mono L1
ENSG00000162512 SDC3 -400839 sc-eQTL 8.17e-01 -0.0208 0.0896 0.622 Mono L1
ENSG00000168528 SERINC2 -901646 sc-eQTL 1.76e-01 -0.13 0.0958 0.622 Mono L1
ENSG00000284543 LINC01226 -998307 sc-eQTL 8.35e-02 0.146 0.0841 0.622 Mono L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.66e-01 0.0669 0.0739 0.622 Mono L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 4.68e-02 -0.177 0.0883 0.622 NK L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 8.17e-01 -0.0141 0.061 0.622 NK L1
ENSG00000134644 PUM1 -558072 sc-eQTL 1.18e-01 0.0998 0.0636 0.622 NK L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 2.50e-01 -0.0848 0.0734 0.622 NK L1
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 4.82e-01 -0.0583 0.0827 0.622 NK L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 9.78e-01 0.00209 0.0764 0.622 NK L1
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.98e-01 0.07 0.0672 0.622 Other_T L1
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.87e-01 0.0766 0.0718 0.622 Other_T L1
ENSG00000134644 PUM1 -558072 sc-eQTL 9.73e-01 0.0022 0.0647 0.622 Other_T L1
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.50e-01 -0.0401 0.053 0.622 Other_T L1
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 5.86e-01 0.0474 0.0868 0.622 Other_T L1
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.31e-01 -0.136 0.09 0.622 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -788869 sc-eQTL 1.72e-01 -0.141 0.103 0.617 B_Activated L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 4.57e-01 -0.0775 0.104 0.617 B_Activated L2
ENSG00000134644 PUM1 -558072 sc-eQTL 3.84e-01 -0.0842 0.0965 0.617 B_Activated L2
ENSG00000162510 MATN1 -215666 sc-eQTL 4.20e-01 -0.0682 0.0844 0.617 B_Activated L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.57e-01 -0.0439 0.0588 0.617 B_Activated L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.46e-01 0.0896 0.0949 0.617 B_Activated L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 9.70e-01 0.00315 0.0842 0.617 B_Activated L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.96e-01 0.0133 0.102 0.622 B_Intermediate L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 5.45e-01 -0.0513 0.0848 0.622 B_Intermediate L2
ENSG00000134644 PUM1 -558072 sc-eQTL 3.19e-01 -0.0797 0.0799 0.622 B_Intermediate L2
ENSG00000162510 MATN1 -215666 sc-eQTL 9.39e-01 -0.00642 0.0833 0.622 B_Intermediate L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.00e-01 -0.0345 0.0511 0.622 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 7.68e-01 -0.0212 0.0718 0.622 B_Intermediate L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 6.04e-01 -0.0417 0.0803 0.622 B_Intermediate L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 4.12e-01 0.0792 0.0964 0.623 B_Memory L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.27e-01 0.0871 0.0887 0.623 B_Memory L2
ENSG00000134644 PUM1 -558072 sc-eQTL 5.43e-01 -0.0471 0.0773 0.623 B_Memory L2
ENSG00000162510 MATN1 -215666 sc-eQTL 5.15e-01 -0.0483 0.074 0.623 B_Memory L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 3.79e-01 -0.0577 0.0655 0.623 B_Memory L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 4.19e-01 0.0606 0.075 0.623 B_Memory L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 6.90e-01 -0.0351 0.0879 0.623 B_Memory L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.61e-01 0.0156 0.0892 0.622 B_Naive1 L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.73e-01 -0.0325 0.077 0.622 B_Naive1 L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.51e-01 0.0512 0.0678 0.622 B_Naive1 L2
ENSG00000162510 MATN1 -215666 sc-eQTL 4.04e-01 -0.0575 0.0688 0.622 B_Naive1 L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 7.78e-01 -0.013 0.046 0.622 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 6.62e-02 -0.111 0.06 0.622 B_Naive1 L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 7.96e-01 0.0193 0.0747 0.622 B_Naive1 L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.82e-01 -0.0258 0.093 0.62 B_Naive2 L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 7.29e-01 -0.0267 0.0768 0.62 B_Naive2 L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.57e-01 0.0559 0.0751 0.62 B_Naive2 L2
ENSG00000162510 MATN1 -215666 sc-eQTL 9.07e-01 -0.00844 0.0722 0.62 B_Naive2 L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 9.22e-01 0.00483 0.049 0.62 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.31e-01 -0.0693 0.0712 0.62 B_Naive2 L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 6.40e-01 -0.0361 0.077 0.62 B_Naive2 L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 6.37e-01 0.0442 0.0936 0.62 CD4_CTL L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.69e-01 0.102 0.0918 0.62 CD4_CTL L2
ENSG00000134644 PUM1 -558072 sc-eQTL 8.33e-01 0.0191 0.0903 0.62 CD4_CTL L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.40e-01 -0.0622 0.0804 0.62 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.65e-01 0.0798 0.0879 0.62 CD4_CTL L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 9.19e-01 0.0079 0.0777 0.62 CD4_CTL L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 3.11e-01 0.0748 0.0736 0.622 CD4_Naive L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 1.49e-02 -0.158 0.0645 0.622 CD4_Naive L2
ENSG00000134644 PUM1 -558072 sc-eQTL 1.80e-02 0.123 0.0515 0.622 CD4_Naive L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.62e-01 -0.0412 0.0559 0.622 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 8.12e-01 -0.0135 0.0568 0.622 CD4_Naive L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 7.17e-01 0.0237 0.0652 0.622 CD4_Naive L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.42e-01 -0.108 0.0922 0.622 CD4_TCM L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 1.27e-01 0.114 0.0741 0.622 CD4_TCM L2
ENSG00000134644 PUM1 -558072 sc-eQTL 3.82e-01 0.0577 0.0659 0.622 CD4_TCM L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.57e-01 -0.0407 0.0547 0.622 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 9.13e-01 -0.00758 0.0695 0.622 CD4_TCM L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 5.59e-02 -0.147 0.0767 0.622 CD4_TCM L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.70e-01 0.102 0.0926 0.622 CD4_TEM L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.22e-01 0.0436 0.0885 0.622 CD4_TEM L2
ENSG00000134644 PUM1 -558072 sc-eQTL 8.91e-01 0.0101 0.0737 0.622 CD4_TEM L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 3.45e-01 0.0704 0.0744 0.622 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 7.47e-02 -0.155 0.0866 0.622 CD4_TEM L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 9.54e-01 0.00501 0.0859 0.622 CD4_TEM L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.38e-01 0.117 0.0991 0.622 CD8_CTL L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.47e-01 -0.0883 0.076 0.622 CD8_CTL L2
ENSG00000134644 PUM1 -558072 sc-eQTL 6.03e-01 0.0386 0.074 0.622 CD8_CTL L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 8.27e-01 -0.018 0.082 0.622 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 6.25e-01 0.0421 0.0862 0.622 CD8_CTL L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 2.63e-01 -0.0907 0.0809 0.622 CD8_CTL L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 6.13e-01 0.0467 0.0922 0.622 CD8_Naive L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 8.58e-01 -0.0142 0.0795 0.622 CD8_Naive L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.02e-01 0.0536 0.0639 0.622 CD8_Naive L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 9.24e-01 -0.00583 0.0613 0.622 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 1.84e-01 -0.102 0.0762 0.622 CD8_Naive L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 5.53e-01 -0.0495 0.0833 0.622 CD8_Naive L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.41e-01 -0.0336 0.101 0.609 CD8_TCM L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 9.25e-01 -0.00876 0.093 0.609 CD8_TCM L2
ENSG00000134644 PUM1 -558072 sc-eQTL 5.55e-01 -0.0516 0.0874 0.609 CD8_TCM L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.08e-02 -0.186 0.0905 0.609 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 5.16e-01 0.0551 0.0846 0.609 CD8_TCM L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 4.23e-01 0.0687 0.0855 0.609 CD8_TCM L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 1.48e-01 -0.141 0.0974 0.621 CD8_TEM L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 4.82e-01 0.0661 0.0938 0.621 CD8_TEM L2
ENSG00000134644 PUM1 -558072 sc-eQTL 7.89e-01 -0.0257 0.096 0.621 CD8_TEM L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 6.06e-01 0.0466 0.0902 0.621 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 1.06e-01 -0.151 0.093 0.621 CD8_TEM L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 4.06e-02 -0.173 0.0839 0.621 CD8_TEM L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.76e-01 0.0283 0.0995 0.621 MAIT L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 7.93e-01 0.0231 0.0881 0.621 MAIT L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.95e-01 -0.0577 0.0844 0.621 MAIT L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.14e-01 -0.052 0.0796 0.621 MAIT L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 2.00e-01 0.114 0.0884 0.621 MAIT L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.41e-01 -0.0871 0.0913 0.621 MAIT L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.63e-01 -0.00462 0.0998 0.618 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 4.77e-01 0.06 0.0842 0.618 NK_CD56bright L2
ENSG00000134644 PUM1 -558072 sc-eQTL 9.28e-01 -0.00799 0.0886 0.618 NK_CD56bright L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.32e-01 -0.0546 0.0873 0.618 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.08e-01 -0.0895 0.0876 0.618 NK_CD56bright L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 8.59e-01 0.0154 0.0865 0.618 NK_CD56bright L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 3.26e-02 -0.2 0.0929 0.623 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.31e-01 -0.0676 0.0693 0.623 NK_CD56dim L2
ENSG00000134644 PUM1 -558072 sc-eQTL 1.11e-01 0.113 0.0709 0.623 NK_CD56dim L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 2.93e-01 -0.0799 0.0758 0.623 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 6.07e-01 -0.049 0.0952 0.623 NK_CD56dim L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.81e-01 0.0689 0.0784 0.623 NK_CD56dim L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 5.72e-01 0.0571 0.101 0.616 NK_HLA L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.07e-01 -0.0922 0.09 0.616 NK_HLA L2
ENSG00000134644 PUM1 -558072 sc-eQTL 1.55e-01 0.125 0.0875 0.616 NK_HLA L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 3.47e-01 -0.0788 0.0837 0.616 NK_HLA L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 7.49e-01 0.0286 0.0892 0.616 NK_HLA L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.94e-01 0.0736 0.0861 0.616 NK_HLA L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.89e-01 -0.0127 0.0915 0.623 NK_cytokine L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.68e-02 0.157 0.0706 0.623 NK_cytokine L2
ENSG00000134644 PUM1 -558072 sc-eQTL 6.41e-01 -0.0361 0.0772 0.623 NK_cytokine L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 6.98e-01 -0.0331 0.085 0.623 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 5.30e-01 -0.0566 0.09 0.623 NK_cytokine L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.51e-01 -0.0782 0.0837 0.623 NK_cytokine L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.59e-01 -0.0323 0.105 0.637 PB L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.23e-01 0.0601 0.122 0.637 PB L2
ENSG00000134644 PUM1 -558072 sc-eQTL 2.53e-02 0.235 0.104 0.637 PB L2
ENSG00000162510 MATN1 -215666 sc-eQTL 6.68e-01 -0.0425 0.0988 0.637 PB L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.89e-01 0.0383 0.0705 0.637 PB L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 5.17e-01 -0.0627 0.0965 0.637 PB L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.53e-01 0.147 0.102 0.637 PB L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.77e-01 -0.0112 0.0721 0.62 Pro_T L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 5.87e-01 -0.0498 0.0915 0.62 Pro_T L2
ENSG00000134644 PUM1 -558072 sc-eQTL 9.32e-01 -0.0073 0.0854 0.62 Pro_T L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 2.34e-01 -0.073 0.0611 0.62 Pro_T L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 1.32e-01 -0.129 0.0852 0.62 Pro_T L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.30e-01 -0.119 0.0783 0.62 Pro_T L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.21e-02 -0.165 0.0944 0.622 Treg L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.94e-01 -0.0783 0.0918 0.622 Treg L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.74e-01 -0.0527 0.0735 0.622 Treg L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.75e-01 -0.0602 0.0842 0.622 Treg L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 6.80e-01 0.0354 0.0858 0.622 Treg L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 7.50e-01 0.0273 0.0857 0.622 Treg L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.23e-01 -0.115 0.0942 0.627 cDC L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 7.54e-01 -0.0322 0.102 0.627 cDC L2
ENSG00000134644 PUM1 -558072 sc-eQTL 3.12e-01 -0.0889 0.0877 0.627 cDC L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.24e-01 -0.0393 0.0616 0.627 cDC L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 1.10e-01 0.126 0.0786 0.627 cDC L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 4.63e-01 0.0571 0.0777 0.627 cDC L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 8.14e-01 0.0197 0.0837 0.627 cDC L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.80e-01 0.00195 0.0767 0.622 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 1.80e-01 0.115 0.0852 0.622 cMono_IL1B L2
ENSG00000134644 PUM1 -558072 sc-eQTL 5.31e-01 -0.0363 0.0579 0.622 cMono_IL1B L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 6.84e-01 -0.0207 0.0508 0.622 cMono_IL1B L2
ENSG00000162512 SDC3 -400839 sc-eQTL 9.80e-01 -0.00239 0.0958 0.622 cMono_IL1B L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 8.27e-02 -0.168 0.0963 0.622 cMono_IL1B L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 1.67e-01 0.118 0.0853 0.622 cMono_IL1B L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 3.39e-02 0.169 0.0791 0.622 cMono_IL1B L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.95e-02 -0.142 0.0804 0.622 cMono_S100A L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 7.42e-01 0.0316 0.0956 0.622 cMono_S100A L2
ENSG00000134644 PUM1 -558072 sc-eQTL 4.96e-01 0.0471 0.0691 0.622 cMono_S100A L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 2.50e-01 0.0611 0.053 0.622 cMono_S100A L2
ENSG00000162512 SDC3 -400839 sc-eQTL 6.70e-01 -0.0392 0.0917 0.622 cMono_S100A L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 3.93e-01 -0.083 0.097 0.622 cMono_S100A L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 1.50e-01 0.113 0.0786 0.622 cMono_S100A L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 4.53e-01 0.0595 0.0792 0.622 cMono_S100A L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.62e-01 0.142 0.126 0.591 gdT L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.31e-01 -0.13 0.108 0.591 gdT L2
ENSG00000134644 PUM1 -558072 sc-eQTL 5.60e-02 0.213 0.111 0.591 gdT L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.99e-01 0.0825 0.122 0.591 gdT L2
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 6.20e-01 0.0559 0.112 0.591 gdT L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 8.67e-01 0.0183 0.109 0.591 gdT L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 9.78e-01 0.0025 0.0895 0.616 intMono L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 5.78e-01 -0.0535 0.0962 0.616 intMono L2
ENSG00000134644 PUM1 -558072 sc-eQTL 2.17e-01 -0.101 0.0814 0.616 intMono L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.00e-01 -0.0539 0.064 0.616 intMono L2
ENSG00000162512 SDC3 -400839 sc-eQTL 5.05e-01 0.0585 0.0876 0.616 intMono L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 4.57e-01 -0.0683 0.0917 0.616 intMono L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 6.41e-01 -0.0406 0.087 0.616 intMono L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 4.66e-01 0.0635 0.0869 0.616 intMono L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 8.47e-01 -0.0161 0.0835 0.624 ncMono L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 2.60e-01 -0.1 0.0887 0.624 ncMono L2
ENSG00000134644 PUM1 -558072 sc-eQTL 1.81e-01 -0.0972 0.0724 0.624 ncMono L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 6.69e-01 0.0283 0.066 0.624 ncMono L2
ENSG00000162512 SDC3 -400839 sc-eQTL 4.39e-01 -0.0573 0.0739 0.624 ncMono L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 7.88e-01 -0.0218 0.0808 0.624 ncMono L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 6.88e-02 0.147 0.0801 0.624 ncMono L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 2.66e-01 -0.0932 0.0835 0.624 ncMono L2
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.61e-02 -0.169 0.0948 0.613 pDC L2
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 4.38e-02 0.211 0.104 0.613 pDC L2
ENSG00000134644 PUM1 -558072 sc-eQTL 1.52e-01 0.125 0.0866 0.613 pDC L2
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.14e-01 0.053 0.0809 0.613 pDC L2
ENSG00000168528 SERINC2 -901646 sc-eQTL 2.43e-01 0.115 0.0978 0.613 pDC L2
ENSG00000284543 LINC01226 -998307 sc-eQTL 5.77e-01 0.0426 0.0762 0.613 pDC L2
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.85e-01 -0.119 0.0892 0.613 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -788869 sc-eQTL 5.27e-01 0.0606 0.0955 0.622 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 8.81e-01 0.012 0.0796 0.622 B_Memory LOneK1K
ENSG00000134644 PUM1 -558072 sc-eQTL 1.80e-01 -0.0946 0.0702 0.622 B_Memory LOneK1K
ENSG00000162510 MATN1 -215666 sc-eQTL 1.76e-01 -0.109 0.0801 0.622 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -249855 sc-eQTL 4.42e-01 -0.0389 0.0505 0.622 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 4.85e-01 0.0467 0.0668 0.622 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -223774 sc-eQTL 1.84e-01 -0.0966 0.0725 0.622 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.59e-01 -0.0267 0.0867 0.622 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.92e-01 -0.0272 0.0685 0.622 B_Naive LOneK1K
ENSG00000134644 PUM1 -558072 sc-eQTL 1.11e-01 0.103 0.0645 0.622 B_Naive LOneK1K
ENSG00000162510 MATN1 -215666 sc-eQTL 3.08e-01 -0.0637 0.0623 0.622 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -249855 sc-eQTL 7.96e-01 -0.0114 0.044 0.622 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.99e-02 -0.116 0.0562 0.622 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -223774 sc-eQTL 5.03e-01 0.0452 0.0674 0.622 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -788869 sc-eQTL 2.07e-01 -0.092 0.0726 0.622 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 3.81e-01 0.0723 0.0824 0.622 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -558072 sc-eQTL 9.76e-01 0.00159 0.0527 0.622 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -249855 sc-eQTL 9.05e-01 0.00554 0.0463 0.622 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -400839 sc-eQTL 6.40e-01 -0.0443 0.0944 0.622 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -901646 sc-eQTL 1.60e-01 -0.136 0.0967 0.622 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -998307 sc-eQTL 1.04e-01 0.129 0.0792 0.622 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -223774 sc-eQTL 5.73e-02 0.141 0.0739 0.622 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -788869 sc-eQTL 7.67e-01 -0.0237 0.0797 0.623 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 6.74e-01 -0.0368 0.0872 0.623 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -558072 sc-eQTL 2.62e-01 -0.0802 0.0713 0.623 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -249855 sc-eQTL 5.07e-01 -0.038 0.0571 0.623 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -400839 sc-eQTL 8.08e-01 -0.0204 0.0835 0.623 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -901646 sc-eQTL 5.51e-01 -0.0517 0.0866 0.623 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -998307 sc-eQTL 7.11e-01 0.0305 0.0822 0.623 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -223774 sc-eQTL 4.61e-01 -0.0607 0.0822 0.623 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -788869 sc-eQTL 4.59e-02 -0.178 0.0885 0.623 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -789063 sc-eQTL 9.95e-01 0.000392 0.061 0.623 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -558072 sc-eQTL 2.33e-01 0.0796 0.0666 0.623 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -249855 sc-eQTL 2.73e-01 -0.0818 0.0745 0.623 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -210585 sc-eQTL 3.99e-01 -0.0726 0.086 0.623 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -223774 sc-eQTL 9.04e-01 0.00897 0.0744 0.623 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -210585 eQTL 2.91e-03 -0.0385 0.0129 0.00292 0.0 0.388

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 -210585 1.89e-06 1.92e-06 2.92e-07 1.23e-06 3.67e-07 6.58e-07 1.26e-06 4.13e-07 1.69e-06 6.69e-07 1.99e-06 1.3e-06 2.61e-06 5.23e-07 4.03e-07 9.77e-07 9.94e-07 1.08e-06 7.04e-07 4.77e-07 7.61e-07 1.91e-06 1.38e-06 5.94e-07 2.43e-06 7.38e-07 1.02e-06 8.36e-07 1.69e-06 1.26e-06 8.65e-07 2.58e-07 2.77e-07 5.79e-07 6.8e-07 4.86e-07 7.24e-07 2.78e-07 4.73e-07 3.32e-07 2.82e-07 2.21e-06 3.55e-07 8.1e-08 2.83e-07 2.73e-07 2.66e-07 6.02e-08 1.7e-07