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Genes within 1Mb (chr1:30507284:A:G):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.17e-01 0.0967 0.0781 0.479 B L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.29e-01 0.0395 0.0627 0.479 B L1
ENSG00000134644 PUM1 -558707 sc-eQTL 4.45e-01 0.0403 0.0526 0.479 B L1
ENSG00000162510 MATN1 -216301 sc-eQTL 1.92e-01 -0.0721 0.0551 0.479 B L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.10e-01 -0.0357 0.0433 0.479 B L1
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.14e-02 -0.0883 0.0504 0.479 B L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 7.58e-01 0.0185 0.0601 0.479 B L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.96e-01 0.0703 0.0672 0.479 CD4T L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.66e-01 0.0302 0.0526 0.479 CD4T L1
ENSG00000134644 PUM1 -558707 sc-eQTL 1.04e-01 0.0761 0.0465 0.479 CD4T L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.88e-01 -0.00078 0.0519 0.479 CD4T L1
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 4.20e-01 -0.0374 0.0464 0.479 CD4T L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 5.25e-01 0.0354 0.0556 0.479 CD4T L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 5.55e-01 -0.0521 0.088 0.479 CD8T L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.78e-01 -0.0326 0.0586 0.479 CD8T L1
ENSG00000134644 PUM1 -558707 sc-eQTL 2.80e-01 0.0558 0.0515 0.479 CD8T L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.10e-01 0.0057 0.0501 0.479 CD8T L1
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 7.92e-01 -0.0155 0.0588 0.479 CD8T L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 2.35e-01 -0.0877 0.0736 0.479 CD8T L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.07e-02 -0.182 0.0779 0.482 DC L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.49e-01 -0.0178 0.0934 0.482 DC L1
ENSG00000134644 PUM1 -558707 sc-eQTL 6.17e-01 0.0366 0.0731 0.482 DC L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 1.57e-01 0.0738 0.052 0.482 DC L1
ENSG00000168528 SERINC2 -902281 sc-eQTL 8.95e-03 0.224 0.0847 0.482 DC L1
ENSG00000284543 LINC01226 -998942 sc-eQTL 3.43e-01 0.0541 0.057 0.482 DC L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 4.85e-01 -0.0577 0.0826 0.482 DC L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 4.48e-01 -0.0469 0.0617 0.479 Mono L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.53e-02 0.132 0.0761 0.479 Mono L1
ENSG00000134644 PUM1 -558707 sc-eQTL 7.85e-01 -0.0134 0.0491 0.479 Mono L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.63e-01 0.0197 0.0452 0.479 Mono L1
ENSG00000162512 SDC3 -401474 sc-eQTL 2.86e-01 -0.0927 0.0866 0.479 Mono L1
ENSG00000168528 SERINC2 -902281 sc-eQTL 4.00e-01 -0.0784 0.093 0.479 Mono L1
ENSG00000284543 LINC01226 -998942 sc-eQTL 3.77e-02 0.17 0.0812 0.479 Mono L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.34e-01 -0.0151 0.0717 0.479 Mono L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 3.90e-01 -0.0733 0.0851 0.479 NK L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.70e-01 0.00959 0.0583 0.479 NK L1
ENSG00000134644 PUM1 -558707 sc-eQTL 6.70e-01 0.0261 0.0612 0.479 NK L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.42e-01 -0.0232 0.0704 0.479 NK L1
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 2.84e-01 0.0848 0.0789 0.479 NK L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 9.71e-01 0.00265 0.0731 0.479 NK L1
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.45e-01 0.0759 0.0651 0.479 Other_T L1
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.40e-02 0.12 0.0693 0.479 Other_T L1
ENSG00000134644 PUM1 -558707 sc-eQTL 7.15e-01 0.0229 0.0627 0.479 Other_T L1
ENSG00000162511 LAPTM5 -250490 sc-eQTL 3.54e-01 -0.0476 0.0513 0.479 Other_T L1
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.73e-01 0.0134 0.0842 0.479 Other_T L1
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.72e-01 -0.0784 0.0875 0.479 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -789504 sc-eQTL 4.46e-01 -0.0772 0.101 0.459 B_Activated L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 9.03e-01 -0.0124 0.102 0.459 B_Activated L2
ENSG00000134644 PUM1 -558707 sc-eQTL 4.06e-01 -0.0788 0.0947 0.459 B_Activated L2
ENSG00000162510 MATN1 -216301 sc-eQTL 5.74e-01 0.0466 0.0828 0.459 B_Activated L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.74e-01 -0.0414 0.0577 0.459 B_Activated L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 9.84e-01 -0.00184 0.0933 0.459 B_Activated L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 4.41e-01 0.0637 0.0824 0.459 B_Activated L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 4.14e-01 0.0787 0.0961 0.479 B_Intermediate L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 4.91e-01 -0.0553 0.0802 0.479 B_Intermediate L2
ENSG00000134644 PUM1 -558707 sc-eQTL 8.42e-01 -0.0151 0.0757 0.479 B_Intermediate L2
ENSG00000162510 MATN1 -216301 sc-eQTL 3.99e-01 -0.0665 0.0787 0.479 B_Intermediate L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.48e-01 -0.0221 0.0483 0.479 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 5.56e-01 -0.04 0.0678 0.479 B_Intermediate L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 5.70e-01 0.0432 0.0759 0.479 B_Intermediate L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 4.04e-01 0.0777 0.093 0.481 B_Memory L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 2.79e-01 0.0929 0.0856 0.481 B_Memory L2
ENSG00000134644 PUM1 -558707 sc-eQTL 7.03e-01 0.0285 0.0747 0.481 B_Memory L2
ENSG00000162510 MATN1 -216301 sc-eQTL 8.02e-01 -0.0179 0.0714 0.481 B_Memory L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.24e-01 -0.0311 0.0633 0.481 B_Memory L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 5.53e-01 0.043 0.0724 0.481 B_Memory L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.89e-01 0.0119 0.0849 0.481 B_Memory L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.37e-01 0.0287 0.0856 0.479 B_Naive1 L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.42e-01 -0.0702 0.0737 0.479 B_Naive1 L2
ENSG00000134644 PUM1 -558707 sc-eQTL 9.52e-01 0.00392 0.0652 0.479 B_Naive1 L2
ENSG00000162510 MATN1 -216301 sc-eQTL 1.03e-01 -0.108 0.0657 0.479 B_Naive1 L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 5.88e-01 -0.024 0.0441 0.479 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 9.18e-02 -0.0976 0.0576 0.479 B_Naive1 L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 9.90e-01 0.000917 0.0717 0.479 B_Naive1 L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 1.76e-01 0.122 0.09 0.479 B_Naive2 L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.03e-01 -0.0187 0.0746 0.479 B_Naive2 L2
ENSG00000134644 PUM1 -558707 sc-eQTL 4.24e-01 0.0584 0.0729 0.479 B_Naive2 L2
ENSG00000162510 MATN1 -216301 sc-eQTL 8.55e-01 0.0128 0.0701 0.479 B_Naive2 L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.91e-01 0.00051 0.0476 0.479 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 6.30e-01 -0.0335 0.0693 0.479 B_Naive2 L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 7.42e-01 -0.0247 0.0749 0.479 B_Naive2 L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.74e-01 0.0974 0.0888 0.48 CD4_CTL L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.80e-01 0.0769 0.0874 0.48 CD4_CTL L2
ENSG00000134644 PUM1 -558707 sc-eQTL 6.17e-03 0.233 0.0843 0.48 CD4_CTL L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.23e-01 0.0614 0.0764 0.48 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.53e-02 0.144 0.0831 0.48 CD4_CTL L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 2.03e-01 0.0939 0.0736 0.48 CD4_CTL L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.91e-01 0.0744 0.0703 0.479 CD4_Naive L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.88e-01 -0.0339 0.0625 0.479 CD4_Naive L2
ENSG00000134644 PUM1 -558707 sc-eQTL 1.06e-01 0.0806 0.0496 0.479 CD4_Naive L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 8.42e-01 -0.0106 0.0535 0.479 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 4.42e-01 -0.0417 0.0542 0.479 CD4_Naive L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 5.90e-01 0.0336 0.0623 0.479 CD4_Naive L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 9.92e-01 0.000944 0.0886 0.479 CD4_TCM L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.00e-01 0.0483 0.0713 0.479 CD4_TCM L2
ENSG00000134644 PUM1 -558707 sc-eQTL 2.91e-01 0.0668 0.063 0.479 CD4_TCM L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.82e-01 0.0369 0.0524 0.479 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 2.73e-01 -0.0729 0.0664 0.479 CD4_TCM L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 4.40e-01 -0.0572 0.074 0.479 CD4_TCM L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.41e-01 0.0295 0.0889 0.479 CD4_TEM L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 1.93e-01 0.11 0.0844 0.479 CD4_TEM L2
ENSG00000134644 PUM1 -558707 sc-eQTL 7.97e-01 -0.0181 0.0706 0.479 CD4_TEM L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 2.64e-01 0.0798 0.0712 0.479 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 4.57e-01 -0.0621 0.0834 0.479 CD4_TEM L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.64e-01 0.0141 0.0823 0.479 CD4_TEM L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 5.85e-01 -0.0523 0.0957 0.479 CD8_CTL L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 2.52e-01 -0.0841 0.0732 0.479 CD8_CTL L2
ENSG00000134644 PUM1 -558707 sc-eQTL 7.92e-01 -0.0188 0.0713 0.479 CD8_CTL L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.20e-01 0.0283 0.0789 0.479 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 9.06e-01 -0.00986 0.083 0.479 CD8_CTL L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 4.97e-01 -0.0531 0.078 0.479 CD8_CTL L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 5.18e-01 0.0573 0.0884 0.479 CD8_Naive L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.58e-01 -0.0137 0.0763 0.479 CD8_Naive L2
ENSG00000134644 PUM1 -558707 sc-eQTL 1.16e-01 0.0964 0.061 0.479 CD8_Naive L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 5.24e-01 0.0375 0.0588 0.479 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.37e-01 -0.0152 0.0734 0.479 CD8_Naive L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 7.41e-01 -0.0265 0.0799 0.479 CD8_Naive L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 3.54e-01 -0.092 0.0989 0.465 CD8_TCM L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 7.46e-01 0.0294 0.0909 0.465 CD8_TCM L2
ENSG00000134644 PUM1 -558707 sc-eQTL 6.94e-01 -0.0336 0.0854 0.465 CD8_TCM L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 1.41e-01 -0.131 0.0889 0.465 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 7.85e-01 0.0226 0.0828 0.465 CD8_TCM L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.81e-01 -0.0125 0.0837 0.465 CD8_TCM L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 9.71e-01 0.00343 0.0946 0.479 CD8_TEM L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 4.30e-01 -0.0716 0.0905 0.479 CD8_TEM L2
ENSG00000134644 PUM1 -558707 sc-eQTL 6.20e-01 -0.046 0.0926 0.479 CD8_TEM L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.70e-01 0.0255 0.0871 0.479 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 2.63e-01 -0.101 0.0902 0.479 CD8_TEM L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 2.09e-01 -0.103 0.0815 0.479 CD8_TEM L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 5.38e-01 0.0582 0.0944 0.478 MAIT L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.33e-01 0.081 0.0836 0.478 MAIT L2
ENSG00000134644 PUM1 -558707 sc-eQTL 8.77e-01 -0.0125 0.0803 0.478 MAIT L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.30e-01 -0.0597 0.0756 0.478 MAIT L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 2.92e-01 0.0888 0.0841 0.478 MAIT L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 4.00e-01 -0.0732 0.0868 0.478 MAIT L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 9.18e-01 -0.00975 0.0946 0.473 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 4.24e-01 0.0639 0.0798 0.473 NK_CD56bright L2
ENSG00000134644 PUM1 -558707 sc-eQTL 5.82e-01 0.0462 0.0839 0.473 NK_CD56bright L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.42e-01 -0.0637 0.0826 0.473 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.55e-01 0.0152 0.0832 0.473 NK_CD56bright L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.05e-01 -0.0203 0.0819 0.473 NK_CD56bright L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 2.66e-01 -0.1 0.0897 0.478 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 9.29e-01 0.00591 0.0665 0.478 NK_CD56dim L2
ENSG00000134644 PUM1 -558707 sc-eQTL 9.94e-01 -0.000534 0.0683 0.478 NK_CD56dim L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.75e-01 -0.0208 0.0728 0.478 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.87e-01 -0.013 0.0912 0.478 NK_CD56dim L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.89e-01 -0.0105 0.0752 0.478 NK_CD56dim L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 4.00e-01 0.0796 0.0945 0.475 NK_HLA L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.78e-02 -0.175 0.0836 0.475 NK_HLA L2
ENSG00000134644 PUM1 -558707 sc-eQTL 6.02e-01 -0.0429 0.0823 0.475 NK_HLA L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 3.07e-01 -0.0802 0.0784 0.475 NK_HLA L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 4.23e-01 0.067 0.0835 0.475 NK_HLA L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 9.00e-01 -0.0102 0.0808 0.475 NK_HLA L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 8.07e-01 0.0217 0.0887 0.478 NK_cytokine L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 1.25e-01 0.106 0.0689 0.478 NK_cytokine L2
ENSG00000134644 PUM1 -558707 sc-eQTL 8.79e-01 0.0114 0.0749 0.478 NK_cytokine L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.48e-01 -0.0265 0.0824 0.478 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 7.98e-01 -0.0224 0.0874 0.478 NK_cytokine L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 7.98e-01 -0.0208 0.0813 0.478 NK_cytokine L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.22e-01 -0.0376 0.105 0.5 PB L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 6.83e-01 0.05 0.122 0.5 PB L2
ENSG00000134644 PUM1 -558707 sc-eQTL 3.46e-01 0.1 0.106 0.5 PB L2
ENSG00000162510 MATN1 -216301 sc-eQTL 5.59e-01 0.058 0.099 0.5 PB L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.47e-01 0.0325 0.0707 0.5 PB L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 4.92e-01 -0.0666 0.0967 0.5 PB L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 1.14e-01 0.162 0.102 0.5 PB L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 8.71e-01 0.0113 0.0696 0.476 Pro_T L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 7.42e-01 0.0291 0.0884 0.476 Pro_T L2
ENSG00000134644 PUM1 -558707 sc-eQTL 1.26e-01 -0.126 0.082 0.476 Pro_T L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 1.65e-01 -0.0821 0.0589 0.476 Pro_T L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 1.99e-01 -0.106 0.0823 0.476 Pro_T L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.33e-01 -0.0736 0.0759 0.476 Pro_T L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 1.36e-01 -0.136 0.0906 0.479 Treg L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.51e-01 -0.0527 0.0881 0.479 Treg L2
ENSG00000134644 PUM1 -558707 sc-eQTL 6.93e-01 -0.0279 0.0705 0.479 Treg L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.50e-01 -0.0367 0.0807 0.479 Treg L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 2.95e-01 0.0861 0.0821 0.479 Treg L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.22e-01 -0.0815 0.082 0.479 Treg L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 1.16e-01 -0.144 0.0908 0.48 cDC L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 6.46e-01 0.0456 0.099 0.48 cDC L2
ENSG00000134644 PUM1 -558707 sc-eQTL 5.05e-01 -0.0568 0.085 0.48 cDC L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 8.31e-01 -0.0127 0.0596 0.48 cDC L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 2.14e-01 0.0951 0.0762 0.48 cDC L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 2.55e-01 0.0855 0.0749 0.48 cDC L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 5.93e-01 0.0434 0.0809 0.48 cDC L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 9.82e-01 0.00167 0.0747 0.479 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.43e-02 0.176 0.0824 0.479 cMono_IL1B L2
ENSG00000134644 PUM1 -558707 sc-eQTL 5.93e-01 -0.0302 0.0563 0.479 cMono_IL1B L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.32e-01 0.00422 0.0495 0.479 cMono_IL1B L2
ENSG00000162512 SDC3 -401474 sc-eQTL 3.35e-01 -0.0899 0.093 0.479 cMono_IL1B L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 1.19e-01 -0.147 0.0938 0.479 cMono_IL1B L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 9.59e-02 0.139 0.0829 0.479 cMono_IL1B L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 2.53e-01 0.0889 0.0775 0.479 cMono_IL1B L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.02e-01 -0.0303 0.0789 0.479 cMono_S100A L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 1.01e-01 0.153 0.0926 0.479 cMono_S100A L2
ENSG00000134644 PUM1 -558707 sc-eQTL 3.23e-01 0.0665 0.0672 0.479 cMono_S100A L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.79e-01 0.0215 0.0518 0.479 cMono_S100A L2
ENSG00000162512 SDC3 -401474 sc-eQTL 5.80e-01 -0.0496 0.0894 0.479 cMono_S100A L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 9.92e-01 0.000927 0.0947 0.479 cMono_S100A L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 5.83e-02 0.145 0.0763 0.479 cMono_S100A L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.59e-01 0.0709 0.0771 0.479 cMono_S100A L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.47e-01 -0.0372 0.115 0.458 gdT L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 6.31e-01 -0.0475 0.0989 0.458 gdT L2
ENSG00000134644 PUM1 -558707 sc-eQTL 1.37e-01 0.151 0.101 0.458 gdT L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 4.61e-01 0.0818 0.111 0.458 gdT L2
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 3.78e-01 -0.0902 0.102 0.458 gdT L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 9.09e-01 0.0114 0.0991 0.458 gdT L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 8.50e-01 0.0164 0.0866 0.471 intMono L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.22e-01 -0.0209 0.0931 0.471 intMono L2
ENSG00000134644 PUM1 -558707 sc-eQTL 8.02e-02 -0.138 0.0784 0.471 intMono L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.60e-01 -0.00312 0.062 0.471 intMono L2
ENSG00000162512 SDC3 -401474 sc-eQTL 5.49e-01 -0.0509 0.0848 0.471 intMono L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 9.76e-01 0.00267 0.0888 0.471 intMono L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 5.78e-01 -0.0468 0.0841 0.471 intMono L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.68e-01 0.014 0.0842 0.471 intMono L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 7.46e-01 -0.0259 0.0801 0.48 ncMono L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 8.05e-02 -0.149 0.0847 0.48 ncMono L2
ENSG00000134644 PUM1 -558707 sc-eQTL 8.40e-01 -0.0141 0.0698 0.48 ncMono L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 9.22e-01 -0.00623 0.0634 0.48 ncMono L2
ENSG00000162512 SDC3 -401474 sc-eQTL 3.34e-01 -0.0687 0.0709 0.48 ncMono L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 4.57e-01 0.0577 0.0774 0.48 ncMono L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 9.30e-02 0.13 0.0769 0.48 ncMono L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 1.76e-01 -0.109 0.0799 0.48 ncMono L2
ENSG00000060688 SNRNP40 -789504 sc-eQTL 1.86e-01 -0.123 0.0928 0.472 pDC L2
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 1.61e-01 0.143 0.102 0.472 pDC L2
ENSG00000134644 PUM1 -558707 sc-eQTL 1.57e-01 0.12 0.0844 0.472 pDC L2
ENSG00000162511 LAPTM5 -250490 sc-eQTL 2.12e-01 0.0985 0.0786 0.472 pDC L2
ENSG00000168528 SERINC2 -902281 sc-eQTL 9.26e-02 0.161 0.0949 0.472 pDC L2
ENSG00000284543 LINC01226 -998942 sc-eQTL 9.58e-01 -0.00388 0.0743 0.472 pDC L2
ENSG00000287510 AL137857.1 -224409 sc-eQTL 1.55e-01 -0.124 0.0869 0.472 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -789504 sc-eQTL 1.09e-01 0.146 0.0906 0.479 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 4.84e-01 0.0531 0.0758 0.479 B_Memory LOneK1K
ENSG00000134644 PUM1 -558707 sc-eQTL 9.74e-01 0.00219 0.0673 0.479 B_Memory LOneK1K
ENSG00000162510 MATN1 -216301 sc-eQTL 4.30e-01 -0.0605 0.0766 0.479 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -250490 sc-eQTL 5.34e-01 -0.03 0.0481 0.479 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 8.50e-01 0.012 0.0637 0.479 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -224409 sc-eQTL 7.20e-01 0.025 0.0694 0.479 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -789504 sc-eQTL 5.42e-01 0.0504 0.0825 0.479 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 5.75e-01 -0.0366 0.0653 0.479 B_Naive LOneK1K
ENSG00000134644 PUM1 -558707 sc-eQTL 2.89e-01 0.0656 0.0616 0.479 B_Naive LOneK1K
ENSG00000162510 MATN1 -216301 sc-eQTL 1.11e-01 -0.0947 0.0591 0.479 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -250490 sc-eQTL 6.62e-01 -0.0183 0.0419 0.479 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 5.81e-02 -0.102 0.0536 0.479 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -224409 sc-eQTL 9.04e-01 0.00772 0.0643 0.479 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -789504 sc-eQTL 6.74e-01 -0.0299 0.0709 0.479 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 1.43e-02 0.196 0.0792 0.479 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -558707 sc-eQTL 8.76e-01 0.00802 0.0513 0.479 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.28e-01 0.0157 0.045 0.479 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -401474 sc-eQTL 2.92e-01 -0.0969 0.0917 0.479 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -902281 sc-eQTL 3.65e-01 -0.0856 0.0944 0.479 CD14_Mono LOneK1K
ENSG00000284543 LINC01226 -998942 sc-eQTL 4.95e-02 0.152 0.0768 0.479 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.43e-01 0.0689 0.0724 0.479 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -789504 sc-eQTL 6.63e-01 -0.0336 0.0771 0.478 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 3.86e-01 -0.0731 0.0842 0.478 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -558707 sc-eQTL 5.26e-01 -0.0438 0.0691 0.478 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -250490 sc-eQTL 8.68e-01 0.00923 0.0553 0.478 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -401474 sc-eQTL 4.03e-01 -0.0676 0.0806 0.478 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -902281 sc-eQTL 6.85e-01 0.034 0.0837 0.478 CD16_Mono LOneK1K
ENSG00000284543 LINC01226 -998942 sc-eQTL 6.90e-01 0.0317 0.0795 0.478 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -224409 sc-eQTL 3.18e-01 -0.0794 0.0794 0.478 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -789504 sc-eQTL 3.98e-01 -0.0722 0.0853 0.478 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -789698 sc-eQTL 7.44e-01 0.0191 0.0583 0.478 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -558707 sc-eQTL 8.53e-01 0.0118 0.0639 0.478 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -250490 sc-eQTL 7.63e-01 -0.0216 0.0714 0.478 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -211220 sc-eQTL 6.19e-01 0.041 0.0824 0.478 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -224409 sc-eQTL 8.64e-01 -0.0122 0.0711 0.478 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000284543 \N -998997 2.67e-07 1.16e-07 3.62e-08 1.82e-07 8.83e-08 9.61e-08 1.42e-07 5.33e-08 1.41e-07 4.57e-08 1.62e-07 8.36e-08 1.41e-07 6.38e-08 5.84e-08 7.26e-08 3.9e-08 1.14e-07 5.19e-08 4.2e-08 1.04e-07 1.26e-07 1.32e-07 4.13e-08 1.32e-07 1.14e-07 1.11e-07 9.15e-08 1.03e-07 1.11e-07 9.73e-08 3.96e-08 2.92e-08 8.65e-08 8.96e-08 3.77e-08 4.72e-08 9.55e-08 7.58e-08 3e-08 4.63e-08 1.33e-07 3.91e-08 3.06e-08 7.26e-08 1.68e-08 1.26e-07 4.04e-09 4.79e-08