logo

Genes within 1Mb (chr1:30487599:A:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.52e-01 0.0359 0.0795 0.564 B L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 1.79e-01 0.0855 0.0634 0.564 B L1
ENSG00000134644 PUM1 -578392 sc-eQTL 1.64e-01 0.0743 0.0532 0.564 B L1
ENSG00000162510 MATN1 -235986 sc-eQTL 7.49e-01 -0.018 0.0562 0.564 B L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 3.78e-01 -0.0388 0.0439 0.564 B L1
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.72e-02 -0.122 0.0509 0.564 B L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 7.10e-01 0.0227 0.061 0.564 B L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 3.29e-01 0.067 0.0685 0.564 CD4T L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 8.66e-01 -0.00904 0.0536 0.564 CD4T L1
ENSG00000134644 PUM1 -578392 sc-eQTL 4.68e-01 0.0347 0.0477 0.564 CD4T L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.25e-01 -0.0423 0.0528 0.564 CD4T L1
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 2.84e-01 -0.0507 0.0472 0.564 CD4T L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 6.52e-01 0.0256 0.0567 0.564 CD4T L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 9.11e-01 -0.0101 0.09 0.564 CD8T L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 3.65e-01 -0.0542 0.0598 0.564 CD8T L1
ENSG00000134644 PUM1 -578392 sc-eQTL 8.54e-01 0.0097 0.0527 0.564 CD8T L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 6.26e-01 -0.025 0.0512 0.564 CD8T L1
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 8.92e-01 -0.00817 0.06 0.564 CD8T L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.11e-01 -0.0942 0.0751 0.564 CD8T L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 5.00e-02 -0.155 0.0784 0.563 DC L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.09e-01 0.0108 0.0938 0.563 DC L1
ENSG00000134644 PUM1 -578392 sc-eQTL 4.84e-01 0.0514 0.0734 0.563 DC L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.50e-01 0.0397 0.0524 0.563 DC L1
ENSG00000168528 SERINC2 -921966 sc-eQTL 2.45e-02 0.194 0.0854 0.563 DC L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.94e-01 -0.108 0.0826 0.563 DC L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 5.49e-01 -0.0372 0.062 0.564 Mono L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.01e-02 0.139 0.0763 0.564 Mono L1
ENSG00000134644 PUM1 -578392 sc-eQTL 8.19e-01 -0.0113 0.0493 0.564 Mono L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 7.76e-01 -0.0129 0.0453 0.564 Mono L1
ENSG00000162512 SDC3 -421159 sc-eQTL 6.16e-01 -0.0437 0.0871 0.564 Mono L1
ENSG00000168528 SERINC2 -921966 sc-eQTL 6.02e-01 -0.0489 0.0935 0.564 Mono L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.27e-01 0.11 0.0716 0.564 Mono L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 1.36e-01 -0.128 0.0854 0.564 NK L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.23e-01 -0.0208 0.0587 0.564 NK L1
ENSG00000134644 PUM1 -578392 sc-eQTL 2.42e-01 0.072 0.0614 0.564 NK L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.08e-01 -0.047 0.0708 0.564 NK L1
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 7.51e-01 -0.0253 0.0797 0.564 NK L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 4.75e-01 0.0526 0.0735 0.564 NK L1
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.69e-02 0.119 0.0645 0.564 Other_T L1
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 8.85e-02 0.118 0.069 0.564 Other_T L1
ENSG00000134644 PUM1 -578392 sc-eQTL 8.72e-01 0.0101 0.0624 0.564 Other_T L1
ENSG00000162511 LAPTM5 -270175 sc-eQTL 2.97e-01 -0.0533 0.0511 0.564 Other_T L1
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 7.00e-01 0.0324 0.0838 0.564 Other_T L1
ENSG00000287510 AL137857.1 -244094 sc-eQTL 5.10e-01 -0.0576 0.0872 0.564 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -809189 sc-eQTL 7.92e-02 -0.179 0.101 0.551 B_Activated L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.70e-01 -0.00394 0.103 0.551 B_Activated L2
ENSG00000134644 PUM1 -578392 sc-eQTL 2.19e-01 -0.117 0.0953 0.551 B_Activated L2
ENSG00000162510 MATN1 -235986 sc-eQTL 9.58e-01 -0.0044 0.0836 0.551 B_Activated L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.78e-01 -0.0325 0.0583 0.551 B_Activated L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 9.63e-01 -0.00433 0.0942 0.551 B_Activated L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 8.25e-01 0.0184 0.0833 0.551 B_Activated L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 9.88e-01 0.00147 0.0991 0.564 B_Intermediate L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 4.48e-01 -0.0627 0.0825 0.564 B_Intermediate L2
ENSG00000134644 PUM1 -578392 sc-eQTL 8.97e-01 0.0101 0.0779 0.564 B_Intermediate L2
ENSG00000162510 MATN1 -235986 sc-eQTL 4.24e-01 -0.0649 0.081 0.564 B_Intermediate L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.93e-01 -0.0341 0.0497 0.564 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 3.31e-01 -0.0679 0.0697 0.564 B_Intermediate L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.04e-01 0.0992 0.0779 0.564 B_Intermediate L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 2.90e-01 0.1 0.0946 0.565 B_Memory L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 4.56e-01 0.0652 0.0873 0.565 B_Memory L2
ENSG00000134644 PUM1 -578392 sc-eQTL 6.62e-01 -0.0332 0.076 0.565 B_Memory L2
ENSG00000162510 MATN1 -235986 sc-eQTL 5.99e-01 -0.0383 0.0727 0.565 B_Memory L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 1.82e-01 -0.086 0.0642 0.565 B_Memory L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 4.20e-01 0.0595 0.0737 0.565 B_Memory L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 3.77e-01 0.0764 0.0863 0.565 B_Memory L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 8.69e-01 0.0142 0.0864 0.564 B_Naive1 L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.46e-01 -0.00504 0.0746 0.564 B_Naive1 L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.21e-01 0.0654 0.0657 0.564 B_Naive1 L2
ENSG00000162510 MATN1 -235986 sc-eQTL 6.91e-01 -0.0265 0.0667 0.564 B_Naive1 L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 2.92e-01 -0.047 0.0445 0.564 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.73e-02 -0.139 0.0578 0.564 B_Naive1 L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.40e-01 -0.00542 0.0724 0.564 B_Naive1 L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.31e-01 -0.0436 0.0907 0.562 B_Naive2 L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 8.55e-01 0.0137 0.0749 0.562 B_Naive2 L2
ENSG00000134644 PUM1 -578392 sc-eQTL 2.68e-01 0.0812 0.0731 0.562 B_Naive2 L2
ENSG00000162510 MATN1 -235986 sc-eQTL 8.68e-01 0.0117 0.0704 0.562 B_Naive2 L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 9.07e-01 -0.00557 0.0478 0.562 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 2.00e-01 -0.0892 0.0694 0.562 B_Naive2 L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 8.34e-01 0.0158 0.0752 0.562 B_Naive2 L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 8.54e-01 0.0167 0.0907 0.566 CD4_CTL L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 1.71e-01 0.122 0.0888 0.566 CD4_CTL L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.73e-01 0.078 0.0874 0.566 CD4_CTL L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 8.86e-01 0.0112 0.078 0.566 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 6.30e-02 0.158 0.0846 0.566 CD4_CTL L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.97e-01 0.0786 0.0751 0.566 CD4_CTL L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 2.18e-01 0.0883 0.0715 0.564 CD4_Naive L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.31e-02 -0.107 0.0632 0.564 CD4_Naive L2
ENSG00000134644 PUM1 -578392 sc-eQTL 2.42e-01 0.0593 0.0506 0.564 CD4_Naive L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.95e-01 -0.0371 0.0543 0.564 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 2.50e-01 -0.0634 0.055 0.564 CD4_Naive L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 4.57e-01 0.0472 0.0633 0.564 CD4_Naive L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 3.17e-01 -0.0897 0.0895 0.564 CD4_TCM L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 2.01e-01 0.0925 0.0721 0.564 CD4_TCM L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.26e-01 0.063 0.0639 0.564 CD4_TCM L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.10e-01 -0.035 0.0531 0.564 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 4.85e-01 -0.0471 0.0673 0.564 CD4_TCM L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.61e-01 -0.0845 0.0749 0.564 CD4_TCM L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 4.91e-01 0.0621 0.09 0.564 CD4_TEM L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 2.23e-01 0.105 0.0856 0.564 CD4_TEM L2
ENSG00000134644 PUM1 -578392 sc-eQTL 5.18e-01 -0.0463 0.0715 0.564 CD4_TEM L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.54e-01 0.0428 0.0723 0.564 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.58e-01 -0.119 0.0843 0.564 CD4_TEM L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.28e-01 0.00754 0.0834 0.564 CD4_TEM L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 7.27e-01 0.0337 0.0964 0.564 CD8_CTL L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 5.51e-01 -0.0442 0.0739 0.564 CD8_CTL L2
ENSG00000134644 PUM1 -578392 sc-eQTL 9.56e-01 0.00393 0.0718 0.564 CD8_CTL L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 3.64e-01 0.0723 0.0794 0.564 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 7.03e-01 0.0319 0.0836 0.564 CD8_CTL L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 6.92e-01 -0.0312 0.0786 0.564 CD8_CTL L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 7.26e-01 0.0314 0.0896 0.564 CD8_Naive L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 8.08e-01 -0.0188 0.0773 0.564 CD8_Naive L2
ENSG00000134644 PUM1 -578392 sc-eQTL 5.37e-01 0.0384 0.0622 0.564 CD8_Naive L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.11e-01 -0.049 0.0595 0.564 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.01e-01 -0.122 0.074 0.564 CD8_Naive L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 6.59e-01 -0.0357 0.081 0.564 CD8_Naive L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 9.93e-01 -0.00084 0.0996 0.549 CD8_TCM L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.05e-01 -0.0346 0.0913 0.549 CD8_TCM L2
ENSG00000134644 PUM1 -578392 sc-eQTL 8.42e-01 -0.0172 0.0858 0.549 CD8_TCM L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 3.71e-02 -0.186 0.0889 0.549 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 5.31e-01 0.0521 0.0831 0.549 CD8_TCM L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 7.36e-01 0.0284 0.084 0.549 CD8_TCM L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 4.12e-01 -0.0797 0.0969 0.559 CD8_TEM L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.80e-01 -0.00236 0.0931 0.559 CD8_TEM L2
ENSG00000134644 PUM1 -578392 sc-eQTL 6.66e-01 -0.041 0.0951 0.559 CD8_TEM L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.76e-01 0.05 0.0894 0.559 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 7.98e-02 -0.162 0.0921 0.559 CD8_TEM L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.29e-01 -0.127 0.0835 0.559 CD8_TEM L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 2.47e-01 0.111 0.0954 0.563 MAIT L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.03e-01 -0.0103 0.0848 0.563 MAIT L2
ENSG00000134644 PUM1 -578392 sc-eQTL 9.69e-01 0.00314 0.0813 0.563 MAIT L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 2.88e-01 -0.0814 0.0764 0.563 MAIT L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 5.29e-01 0.0538 0.0853 0.563 MAIT L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 6.17e-01 -0.044 0.0879 0.563 MAIT L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 3.32e-01 -0.0933 0.0959 0.558 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 3.62e-01 0.0741 0.081 0.558 NK_CD56bright L2
ENSG00000134644 PUM1 -578392 sc-eQTL 9.80e-01 0.00216 0.0853 0.558 NK_CD56bright L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 1.79e-01 -0.113 0.0837 0.558 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 8.04e-01 -0.021 0.0845 0.558 NK_CD56bright L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 7.40e-01 -0.0277 0.0833 0.558 NK_CD56bright L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 8.54e-02 -0.155 0.0898 0.565 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.83e-01 -0.0184 0.0668 0.565 NK_CD56dim L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.14e-01 0.069 0.0684 0.565 NK_CD56dim L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.64e-01 -0.0422 0.0731 0.565 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 2.89e-01 -0.0972 0.0914 0.565 NK_CD56dim L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.61e-01 0.106 0.0752 0.565 NK_CD56dim L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 1.61e-01 0.133 0.0947 0.559 NK_HLA L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 1.25e-01 -0.13 0.0844 0.559 NK_HLA L2
ENSG00000134644 PUM1 -578392 sc-eQTL 8.91e-01 0.0113 0.0828 0.559 NK_HLA L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.20e-01 -0.0637 0.0789 0.559 NK_HLA L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 2.14e-01 0.104 0.0837 0.559 NK_HLA L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 3.85e-02 0.167 0.0804 0.559 NK_HLA L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.68e-01 -0.038 0.0886 0.565 NK_cytokine L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 8.48e-02 0.119 0.0687 0.565 NK_cytokine L2
ENSG00000134644 PUM1 -578392 sc-eQTL 9.97e-01 0.000258 0.0748 0.565 NK_cytokine L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 9.40e-01 -0.00617 0.0823 0.565 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 3.06e-01 -0.0892 0.087 0.565 NK_cytokine L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.86e-01 -0.00143 0.0812 0.565 NK_cytokine L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 7.70e-01 0.0301 0.102 0.589 PB L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 5.49e-01 0.0713 0.119 0.589 PB L2
ENSG00000134644 PUM1 -578392 sc-eQTL 2.12e-01 0.128 0.102 0.589 PB L2
ENSG00000162510 MATN1 -235986 sc-eQTL 9.84e-01 0.00187 0.0962 0.589 PB L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 9.79e-01 -0.00181 0.0687 0.589 PB L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 6.20e-01 -0.0466 0.0939 0.589 PB L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.12e-02 0.168 0.0988 0.589 PB L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 5.74e-01 0.0396 0.0703 0.561 Pro_T L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.22e-01 -0.0319 0.0893 0.561 Pro_T L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.64e-01 -0.0758 0.0832 0.561 Pro_T L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 1.90e-01 -0.0783 0.0595 0.561 Pro_T L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.46e-01 -0.121 0.0831 0.561 Pro_T L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 3.75e-01 -0.0682 0.0767 0.561 Pro_T L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 9.18e-02 -0.155 0.0916 0.564 Treg L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 3.71e-01 -0.0799 0.089 0.564 Treg L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.59e-01 -0.0654 0.0712 0.564 Treg L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 6.84e-01 -0.0333 0.0817 0.564 Treg L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 6.01e-01 0.0436 0.0832 0.564 Treg L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.33e-01 0.00697 0.0832 0.564 Treg L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 1.05e-01 -0.148 0.0908 0.568 cDC L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.23e-01 0.0352 0.099 0.568 cDC L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.17e-01 -0.0851 0.0848 0.568 cDC L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 2.57e-01 -0.0675 0.0594 0.568 cDC L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 9.67e-02 0.127 0.076 0.568 cDC L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 9.79e-01 0.0021 0.081 0.568 cDC L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 9.63e-01 -0.00347 0.0747 0.564 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 1.40e-02 0.204 0.0822 0.564 cMono_IL1B L2
ENSG00000134644 PUM1 -578392 sc-eQTL 5.74e-01 -0.0317 0.0564 0.564 cMono_IL1B L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.45e-01 -0.03 0.0495 0.564 cMono_IL1B L2
ENSG00000162512 SDC3 -421159 sc-eQTL 6.25e-01 -0.0457 0.0932 0.564 cMono_IL1B L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 3.19e-01 -0.0941 0.0942 0.564 cMono_IL1B L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 4.42e-03 0.22 0.0764 0.564 cMono_IL1B L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.17e-01 -0.0395 0.0788 0.564 cMono_S100A L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 4.72e-01 0.067 0.0931 0.564 cMono_S100A L2
ENSG00000134644 PUM1 -578392 sc-eQTL 5.17e-01 0.0437 0.0673 0.564 cMono_S100A L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 6.21e-01 0.0256 0.0517 0.564 cMono_S100A L2
ENSG00000162512 SDC3 -421159 sc-eQTL 6.98e-01 -0.0348 0.0894 0.564 cMono_S100A L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 9.22e-01 0.00923 0.0947 0.564 cMono_S100A L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.33e-01 0.116 0.0768 0.564 cMono_S100A L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 5.96e-01 0.0638 0.12 0.53 gdT L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 5.28e-01 -0.0651 0.103 0.53 gdT L2
ENSG00000134644 PUM1 -578392 sc-eQTL 1.53e-01 0.152 0.106 0.53 gdT L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.43e-01 0.0704 0.115 0.53 gdT L2
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 8.78e-01 -0.0164 0.107 0.53 gdT L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.88e-01 0.11 0.103 0.53 gdT L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 7.90e-01 -0.023 0.0861 0.56 intMono L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 9.16e-01 0.00982 0.0926 0.56 intMono L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.16e-01 -0.0788 0.0784 0.56 intMono L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.39e-01 -0.0477 0.0615 0.56 intMono L2
ENSG00000162512 SDC3 -421159 sc-eQTL 3.92e-01 -0.0723 0.0843 0.56 intMono L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 6.62e-01 0.0386 0.0883 0.56 intMono L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 3.16e-01 0.0839 0.0835 0.56 intMono L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 8.21e-01 0.0186 0.0823 0.566 ncMono L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 6.95e-01 -0.0344 0.0877 0.566 ncMono L2
ENSG00000134644 PUM1 -578392 sc-eQTL 3.88e-01 -0.0619 0.0715 0.566 ncMono L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.54e-01 -0.0385 0.065 0.566 ncMono L2
ENSG00000162512 SDC3 -421159 sc-eQTL 6.02e-01 -0.0381 0.0729 0.566 ncMono L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 1.82e-01 0.106 0.0793 0.566 ncMono L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 5.19e-01 -0.0532 0.0824 0.566 ncMono L2
ENSG00000060688 SNRNP40 -809189 sc-eQTL 4.71e-01 -0.0686 0.095 0.556 pDC L2
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 1.43e-01 0.153 0.104 0.556 pDC L2
ENSG00000134644 PUM1 -578392 sc-eQTL 1.59e-01 0.122 0.0861 0.556 pDC L2
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.76e-01 0.0574 0.0804 0.556 pDC L2
ENSG00000168528 SERINC2 -921966 sc-eQTL 6.43e-02 0.18 0.0966 0.556 pDC L2
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.08e-01 -0.112 0.0887 0.556 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -809189 sc-eQTL 3.59e-01 0.0852 0.0927 0.564 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 6.56e-01 0.0345 0.0773 0.564 B_Memory LOneK1K
ENSG00000134644 PUM1 -578392 sc-eQTL 4.98e-01 -0.0465 0.0684 0.564 B_Memory LOneK1K
ENSG00000162510 MATN1 -235986 sc-eQTL 1.76e-01 -0.106 0.0778 0.564 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -270175 sc-eQTL 3.19e-01 -0.0489 0.049 0.564 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 9.03e-01 -0.00795 0.0649 0.564 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -244094 sc-eQTL 4.30e-01 0.0559 0.0707 0.564 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -809189 sc-eQTL 8.65e-01 -0.0143 0.0839 0.564 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.89e-01 0.0178 0.0663 0.564 B_Naive LOneK1K
ENSG00000134644 PUM1 -578392 sc-eQTL 6.33e-02 0.116 0.0622 0.564 B_Naive LOneK1K
ENSG00000162510 MATN1 -235986 sc-eQTL 5.58e-01 -0.0354 0.0604 0.564 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -270175 sc-eQTL 3.74e-01 -0.0378 0.0424 0.564 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 1.47e-02 -0.133 0.0541 0.564 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -244094 sc-eQTL 7.85e-01 0.0179 0.0652 0.564 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.65e-01 -0.0308 0.071 0.564 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 3.57e-02 0.168 0.0796 0.564 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -578392 sc-eQTL 9.09e-01 0.0059 0.0513 0.564 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -270175 sc-eQTL 8.71e-01 -0.00736 0.0451 0.564 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -421159 sc-eQTL 4.05e-01 -0.0767 0.0919 0.564 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -921966 sc-eQTL 6.13e-01 -0.048 0.0946 0.564 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -244094 sc-eQTL 1.07e-02 0.184 0.0716 0.564 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -809189 sc-eQTL 6.89e-01 -0.0308 0.077 0.565 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.58e-01 0.026 0.0843 0.565 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -578392 sc-eQTL 6.73e-01 -0.0292 0.0691 0.565 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -270175 sc-eQTL 4.63e-01 -0.0405 0.0552 0.565 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -421159 sc-eQTL 4.71e-01 -0.0582 0.0806 0.565 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -921966 sc-eQTL 4.43e-01 0.0643 0.0836 0.565 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -244094 sc-eQTL 7.87e-01 -0.0216 0.0795 0.565 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -809189 sc-eQTL 1.39e-01 -0.127 0.0858 0.565 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -809383 sc-eQTL 7.95e-01 -0.0153 0.0589 0.565 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -578392 sc-eQTL 3.75e-01 0.0573 0.0644 0.565 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -270175 sc-eQTL 5.60e-01 -0.0421 0.0721 0.565 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -230905 sc-eQTL 4.61e-01 -0.0614 0.0831 0.565 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -244094 sc-eQTL 2.28e-01 0.0865 0.0716 0.565 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -230905 eQTL 8.16e-03 -0.0328 0.0124 0.00157 0.0 0.449

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 -230905 1.41e-06 1.3e-06 2.74e-07 1.26e-06 4.73e-07 6.36e-07 1.36e-06 4.45e-07 1.7e-06 7.15e-07 2.07e-06 1.13e-06 2.67e-06 3.41e-07 3.86e-07 1.04e-06 1.14e-06 1.18e-06 5.52e-07 5.88e-07 6.41e-07 1.83e-06 1.4e-06 8.52e-07 2.44e-06 1.02e-06 1.03e-06 9.36e-07 1.68e-06 1.31e-06 8.43e-07 2.49e-07 3.99e-07 7.05e-07 5.82e-07 5.99e-07 7.06e-07 3.5e-07 5.01e-07 1.98e-07 3.05e-07 2.12e-06 3.34e-07 1.66e-07 3.4e-07 2.74e-07 3.68e-07 1.7e-07 2.46e-07