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Genes within 1Mb (chr1:30484974:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -811814 sc-eQTL 8.95e-01 -0.0169 0.128 0.897 B L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 5.57e-01 0.0604 0.103 0.897 B L1
ENSG00000134644 PUM1 -581017 sc-eQTL 3.14e-02 0.185 0.0853 0.897 B L1
ENSG00000162510 MATN1 -238611 sc-eQTL 6.10e-01 -0.0463 0.0906 0.897 B L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.92e-01 -0.00962 0.071 0.897 B L1
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 7.89e-01 0.0223 0.0832 0.897 B L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 2.00e-01 0.126 0.0981 0.897 B L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 9.13e-01 -0.0123 0.113 0.897 CD4T L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 9.35e-01 -0.00717 0.088 0.897 CD4T L1
ENSG00000134644 PUM1 -581017 sc-eQTL 4.04e-01 0.0654 0.0782 0.897 CD4T L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.36e-01 -0.0835 0.0866 0.897 CD4T L1
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 9.08e-01 0.00903 0.0777 0.897 CD4T L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 9.40e-01 -0.00697 0.093 0.897 CD4T L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 9.77e-01 0.0041 0.145 0.897 CD8T L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 5.79e-01 -0.0537 0.0965 0.897 CD8T L1
ENSG00000134644 PUM1 -581017 sc-eQTL 6.08e-01 0.0436 0.085 0.897 CD8T L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.48e-02 -0.152 0.0819 0.897 CD8T L1
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 2.88e-01 0.103 0.0965 0.897 CD8T L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.10e-01 -0.0292 0.122 0.897 CD8T L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 3.90e-01 -0.109 0.127 0.894 DC L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 3.07e-01 0.153 0.15 0.894 DC L1
ENSG00000134644 PUM1 -581017 sc-eQTL 5.47e-01 0.0709 0.118 0.894 DC L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.28e-01 0.0666 0.0839 0.894 DC L1
ENSG00000168528 SERINC2 -924591 sc-eQTL 3.75e-02 0.287 0.137 0.894 DC L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.41e-01 -0.195 0.132 0.894 DC L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.45e-01 -0.0761 0.0995 0.897 Mono L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.66e-01 0.0367 0.123 0.897 Mono L1
ENSG00000134644 PUM1 -581017 sc-eQTL 6.61e-01 -0.0347 0.0791 0.897 Mono L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.47e-01 -0.0333 0.0728 0.897 Mono L1
ENSG00000162512 SDC3 -423784 sc-eQTL 4.27e-02 -0.282 0.139 0.897 Mono L1
ENSG00000168528 SERINC2 -924591 sc-eQTL 5.89e-02 0.283 0.149 0.897 Mono L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 6.86e-02 0.21 0.115 0.897 Mono L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.78e-01 -0.099 0.139 0.897 NK L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 1.57e-01 0.135 0.095 0.897 NK L1
ENSG00000134644 PUM1 -581017 sc-eQTL 6.81e-01 0.0412 0.1 0.897 NK L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.14e-01 0.0941 0.115 0.897 NK L1
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 4.69e-01 0.0939 0.129 0.897 NK L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 2.10e-01 0.15 0.119 0.897 NK L1
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.37e-01 0.0805 0.103 0.897 Other_T L1
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 3.64e-01 0.1 0.111 0.897 Other_T L1
ENSG00000134644 PUM1 -581017 sc-eQTL 4.92e-01 -0.0684 0.0995 0.897 Other_T L1
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.85e-01 -0.0571 0.0815 0.897 Other_T L1
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 5.59e-01 -0.0783 0.134 0.897 Other_T L1
ENSG00000287510 AL137857.1 -246719 sc-eQTL 2.98e-01 0.145 0.139 0.897 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -811814 sc-eQTL 6.74e-01 -0.0689 0.163 0.885 B_Activated L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.60e-01 0.185 0.164 0.885 B_Activated L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.48e-01 0.00998 0.153 0.885 B_Activated L2
ENSG00000162510 MATN1 -238611 sc-eQTL 7.95e-01 0.0348 0.134 0.885 B_Activated L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.92e-01 -0.0642 0.0932 0.885 B_Activated L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 8.12e-01 -0.0359 0.151 0.885 B_Activated L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 6.76e-01 0.0557 0.133 0.885 B_Activated L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 6.56e-01 0.07 0.157 0.897 B_Intermediate L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 4.39e-02 0.263 0.13 0.897 B_Intermediate L2
ENSG00000134644 PUM1 -581017 sc-eQTL 5.17e-01 0.08 0.123 0.897 B_Intermediate L2
ENSG00000162510 MATN1 -238611 sc-eQTL 5.40e-01 -0.0787 0.128 0.897 B_Intermediate L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.95e-01 0.0309 0.0789 0.897 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 5.01e-01 -0.0745 0.111 0.897 B_Intermediate L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.07e-01 0.199 0.123 0.897 B_Intermediate L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 1.72e-01 0.204 0.149 0.899 B_Memory L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 4.40e-01 -0.106 0.138 0.899 B_Memory L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.50e-01 0.00746 0.12 0.899 B_Memory L2
ENSG00000162510 MATN1 -238611 sc-eQTL 2.27e-01 -0.139 0.114 0.899 B_Memory L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.60e-01 -0.0752 0.102 0.899 B_Memory L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 3.21e-01 0.115 0.116 0.899 B_Memory L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 9.17e-02 0.23 0.135 0.899 B_Memory L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 5.07e-01 -0.0917 0.138 0.897 B_Naive1 L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.37e-01 0.0564 0.119 0.897 B_Naive1 L2
ENSG00000134644 PUM1 -581017 sc-eQTL 1.15e-01 0.165 0.105 0.897 B_Naive1 L2
ENSG00000162510 MATN1 -238611 sc-eQTL 5.56e-01 -0.063 0.107 0.897 B_Naive1 L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.53e-01 -0.0321 0.0713 0.897 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.82e-01 0.0384 0.0937 0.897 B_Naive1 L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 6.83e-01 0.0473 0.116 0.897 B_Naive1 L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.54e-01 -0.111 0.148 0.897 B_Naive2 L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 5.24e-01 0.0782 0.122 0.897 B_Naive2 L2
ENSG00000134644 PUM1 -581017 sc-eQTL 2.27e-01 0.145 0.119 0.897 B_Naive2 L2
ENSG00000162510 MATN1 -238611 sc-eQTL 8.05e-01 0.0285 0.115 0.897 B_Naive2 L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 7.27e-01 -0.0273 0.0781 0.897 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 3.69e-01 -0.102 0.114 0.897 B_Naive2 L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.73e-01 0.0197 0.123 0.897 B_Naive2 L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 6.54e-01 -0.0658 0.147 0.895 CD4_CTL L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 3.98e-01 0.122 0.144 0.895 CD4_CTL L2
ENSG00000134644 PUM1 -581017 sc-eQTL 1.71e-01 0.194 0.141 0.895 CD4_CTL L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.78e-01 -0.0194 0.126 0.895 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 1.80e-01 0.185 0.137 0.895 CD4_CTL L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.42e-01 0.179 0.121 0.895 CD4_CTL L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 9.06e-01 0.0139 0.117 0.897 CD4_Naive L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 4.63e-01 -0.0759 0.103 0.897 CD4_Naive L2
ENSG00000134644 PUM1 -581017 sc-eQTL 1.06e-01 0.133 0.0821 0.897 CD4_Naive L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.32e-01 -0.0859 0.0884 0.897 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 8.79e-01 -0.0137 0.0899 0.897 CD4_Naive L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 4.16e-01 -0.0839 0.103 0.897 CD4_Naive L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.28e-01 -0.116 0.146 0.897 CD4_TCM L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 5.67e-01 0.0677 0.118 0.897 CD4_TCM L2
ENSG00000134644 PUM1 -581017 sc-eQTL 7.20e-01 0.0375 0.105 0.897 CD4_TCM L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 9.18e-01 -0.00897 0.0868 0.897 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.41e-01 -0.0514 0.11 0.897 CD4_TCM L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 6.78e-01 -0.0509 0.123 0.897 CD4_TCM L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.84e-01 -0.101 0.144 0.897 CD4_TEM L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.62e-01 0.154 0.137 0.897 CD4_TEM L2
ENSG00000134644 PUM1 -581017 sc-eQTL 6.21e-01 0.0567 0.114 0.897 CD4_TEM L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.83e-01 -0.101 0.115 0.897 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.19e-01 0.0673 0.135 0.897 CD4_TEM L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 5.36e-01 -0.0827 0.133 0.897 CD4_TEM L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.64e-01 -0.115 0.156 0.897 CD8_CTL L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 3.52e-01 0.112 0.12 0.897 CD8_CTL L2
ENSG00000134644 PUM1 -581017 sc-eQTL 6.49e-01 -0.053 0.116 0.897 CD8_CTL L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 9.50e-01 0.00807 0.129 0.897 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 4.58e-01 0.101 0.135 0.897 CD8_CTL L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 4.77e-01 0.0908 0.127 0.897 CD8_CTL L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 5.20e-01 0.0927 0.144 0.897 CD8_Naive L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.79e-01 -0.134 0.124 0.897 CD8_Naive L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.93e-01 -0.000856 0.0999 0.897 CD8_Naive L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 1.38e-01 -0.142 0.0952 0.897 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 9.26e-01 0.0111 0.12 0.897 CD8_Naive L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.50e-01 0.0246 0.13 0.897 CD8_Naive L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.87e-01 -0.108 0.155 0.889 CD8_TCM L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 9.18e-01 0.0146 0.142 0.889 CD8_TCM L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.52e-01 -0.00803 0.134 0.889 CD8_TCM L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.23e-01 -0.0689 0.14 0.889 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 1.46e-02 0.314 0.128 0.889 CD8_TCM L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 4.51e-02 -0.261 0.13 0.889 CD8_TCM L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.80e-01 0.111 0.157 0.904 CD8_TEM L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.50e-01 -0.0683 0.15 0.904 CD8_TEM L2
ENSG00000134644 PUM1 -581017 sc-eQTL 5.18e-01 -0.0995 0.154 0.904 CD8_TEM L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.37e-01 -0.0297 0.145 0.904 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 5.65e-01 -0.0864 0.15 0.904 CD8_TEM L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.75e-01 0.184 0.135 0.904 CD8_TEM L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 2.68e-01 0.17 0.153 0.896 MAIT L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 8.18e-01 0.0313 0.136 0.896 MAIT L2
ENSG00000134644 PUM1 -581017 sc-eQTL 3.72e-01 0.116 0.13 0.896 MAIT L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 7.98e-02 -0.215 0.122 0.896 MAIT L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 2.88e-01 -0.145 0.136 0.896 MAIT L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 5.41e-01 0.0862 0.141 0.896 MAIT L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 1.26e-01 -0.236 0.154 0.893 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 1.13e-01 0.207 0.13 0.893 NK_CD56bright L2
ENSG00000134644 PUM1 -581017 sc-eQTL 7.31e-01 0.0472 0.137 0.893 NK_CD56bright L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.36e-01 0.028 0.135 0.893 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 1.37e-02 0.333 0.134 0.893 NK_CD56bright L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.37e-01 0.199 0.133 0.893 NK_CD56bright L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 7.56e-01 -0.0456 0.147 0.897 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.63e-02 0.192 0.108 0.897 NK_CD56dim L2
ENSG00000134644 PUM1 -581017 sc-eQTL 6.05e-01 -0.0577 0.111 0.897 NK_CD56dim L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.65e-01 0.108 0.119 0.897 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.50e-02 -0.274 0.148 0.897 NK_CD56dim L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 7.92e-01 0.0324 0.123 0.897 NK_CD56dim L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 1.95e-01 0.202 0.155 0.895 NK_HLA L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.11e-01 0.0711 0.139 0.895 NK_HLA L2
ENSG00000134644 PUM1 -581017 sc-eQTL 2.50e-01 -0.156 0.135 0.895 NK_HLA L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.10e-01 0.132 0.129 0.895 NK_HLA L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 3.80e-01 0.121 0.138 0.895 NK_HLA L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 3.23e-01 0.132 0.133 0.895 NK_HLA L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 5.86e-01 -0.0795 0.146 0.897 NK_cytokine L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.72e-01 0.125 0.114 0.897 NK_cytokine L2
ENSG00000134644 PUM1 -581017 sc-eQTL 2.02e-01 0.157 0.123 0.897 NK_cytokine L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 5.35e-01 0.0841 0.135 0.897 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 7.52e-01 0.0454 0.144 0.897 NK_cytokine L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 3.66e-01 0.121 0.133 0.897 NK_cytokine L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 8.60e-01 0.0289 0.163 0.893 PB L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.90e-01 -0.0757 0.189 0.893 PB L2
ENSG00000134644 PUM1 -581017 sc-eQTL 8.30e-01 0.0354 0.164 0.893 PB L2
ENSG00000162510 MATN1 -238611 sc-eQTL 9.13e-01 -0.0167 0.153 0.893 PB L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 2.01e-01 -0.14 0.109 0.893 PB L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.28e-02 -0.277 0.147 0.893 PB L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 3.79e-01 0.14 0.159 0.893 PB L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 8.35e-01 0.0231 0.111 0.896 Pro_T L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 9.19e-01 -0.0142 0.14 0.896 Pro_T L2
ENSG00000134644 PUM1 -581017 sc-eQTL 1.72e-01 -0.179 0.13 0.896 Pro_T L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 5.53e-01 -0.0558 0.0939 0.896 Pro_T L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 6.56e-02 -0.241 0.13 0.896 Pro_T L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 5.65e-01 0.0696 0.121 0.896 Pro_T L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 7.40e-01 0.0495 0.149 0.897 Treg L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.97e-01 -0.0371 0.144 0.897 Treg L2
ENSG00000134644 PUM1 -581017 sc-eQTL 7.28e-01 -0.0402 0.116 0.897 Treg L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 4.86e-01 -0.0923 0.132 0.897 Treg L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 3.96e-02 -0.276 0.133 0.897 Treg L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 7.90e-01 0.0359 0.135 0.897 Treg L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 3.98e-01 -0.123 0.145 0.89 cDC L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.67e-01 0.0466 0.157 0.89 cDC L2
ENSG00000134644 PUM1 -581017 sc-eQTL 8.81e-01 -0.0202 0.135 0.89 cDC L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.67e-01 -0.0854 0.0945 0.89 cDC L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 3.13e-01 0.123 0.121 0.89 cDC L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 4.15e-01 -0.105 0.128 0.89 cDC L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 6.76e-01 -0.0501 0.12 0.897 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 8.66e-01 0.0226 0.134 0.897 cMono_IL1B L2
ENSG00000134644 PUM1 -581017 sc-eQTL 7.00e-01 -0.035 0.0905 0.897 cMono_IL1B L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.13e-01 -0.0188 0.0794 0.897 cMono_IL1B L2
ENSG00000162512 SDC3 -423784 sc-eQTL 1.91e-01 -0.196 0.149 0.897 cMono_IL1B L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 1.40e-01 0.223 0.151 0.897 cMono_IL1B L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 4.62e-02 0.248 0.124 0.897 cMono_IL1B L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 3.38e-01 -0.12 0.125 0.897 cMono_S100A L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.70e-01 -0.0435 0.148 0.897 cMono_S100A L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.56e-01 0.00589 0.107 0.897 cMono_S100A L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 9.94e-01 0.000656 0.0825 0.897 cMono_S100A L2
ENSG00000162512 SDC3 -423784 sc-eQTL 1.97e-01 -0.184 0.142 0.897 cMono_S100A L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 3.47e-02 0.317 0.149 0.897 cMono_S100A L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.59e-03 0.385 0.12 0.897 cMono_S100A L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 2.76e-01 -0.203 0.185 0.891 gdT L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.36e-01 -0.0757 0.159 0.891 gdT L2
ENSG00000134644 PUM1 -581017 sc-eQTL 2.87e-01 -0.175 0.164 0.891 gdT L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 3.46e-01 0.169 0.178 0.891 gdT L2
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 3.99e-01 -0.139 0.165 0.891 gdT L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.86e-02 0.271 0.158 0.891 gdT L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 8.91e-01 0.0189 0.137 0.893 intMono L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.48e-02 0.33 0.146 0.893 intMono L2
ENSG00000134644 PUM1 -581017 sc-eQTL 6.85e-01 0.0509 0.125 0.893 intMono L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 7.47e-01 0.0318 0.0982 0.893 intMono L2
ENSG00000162512 SDC3 -423784 sc-eQTL 1.43e-01 -0.197 0.134 0.893 intMono L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 5.47e-02 0.27 0.14 0.893 intMono L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.40e-01 -0.0269 0.133 0.893 intMono L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 8.53e-01 0.0244 0.132 0.896 ncMono L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 3.53e-01 -0.131 0.14 0.896 ncMono L2
ENSG00000134644 PUM1 -581017 sc-eQTL 3.89e-01 0.0989 0.115 0.896 ncMono L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 9.47e-02 -0.174 0.104 0.896 ncMono L2
ENSG00000162512 SDC3 -423784 sc-eQTL 2.65e-01 -0.13 0.117 0.896 ncMono L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 3.97e-03 0.364 0.125 0.896 ncMono L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.87e-01 0.0189 0.132 0.896 ncMono L2
ENSG00000060688 SNRNP40 -811814 sc-eQTL 9.02e-01 -0.0181 0.146 0.893 pDC L2
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 2.89e-01 0.17 0.16 0.893 pDC L2
ENSG00000134644 PUM1 -581017 sc-eQTL 9.06e-01 0.0157 0.133 0.893 pDC L2
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.79e-02 0.225 0.122 0.893 pDC L2
ENSG00000168528 SERINC2 -924591 sc-eQTL 4.82e-02 0.295 0.148 0.893 pDC L2
ENSG00000287510 AL137857.1 -246719 sc-eQTL 7.35e-01 -0.0465 0.137 0.893 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -811814 sc-eQTL 1.34e-01 0.222 0.148 0.897 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 1.19e-01 0.192 0.123 0.897 B_Memory LOneK1K
ENSG00000134644 PUM1 -581017 sc-eQTL 4.18e-01 0.0887 0.109 0.897 B_Memory LOneK1K
ENSG00000162510 MATN1 -238611 sc-eQTL 3.23e-01 -0.123 0.124 0.897 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -272800 sc-eQTL 7.14e-01 -0.0288 0.0784 0.897 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 7.53e-01 0.0326 0.104 0.897 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -246719 sc-eQTL 1.90e-01 0.148 0.113 0.897 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -811814 sc-eQTL 2.47e-01 -0.157 0.135 0.897 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 6.51e-01 0.0486 0.107 0.897 B_Naive LOneK1K
ENSG00000134644 PUM1 -581017 sc-eQTL 1.49e-01 0.146 0.101 0.897 B_Naive LOneK1K
ENSG00000162510 MATN1 -238611 sc-eQTL 5.80e-01 -0.054 0.0975 0.897 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -272800 sc-eQTL 8.84e-01 -0.0101 0.0687 0.897 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 9.76e-01 0.00271 0.0887 0.897 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -246719 sc-eQTL 6.43e-01 0.0489 0.105 0.897 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -811814 sc-eQTL 4.18e-01 -0.0924 0.114 0.897 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 7.84e-01 -0.0355 0.129 0.897 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -581017 sc-eQTL 8.14e-01 -0.0194 0.0825 0.897 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.16e-01 -0.0364 0.0724 0.897 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -423784 sc-eQTL 1.29e-01 -0.224 0.147 0.897 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -924591 sc-eQTL 6.02e-02 0.285 0.151 0.897 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -246719 sc-eQTL 5.22e-03 0.324 0.115 0.897 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -811814 sc-eQTL 9.76e-01 0.00368 0.123 0.897 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 4.18e-01 0.109 0.134 0.897 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -581017 sc-eQTL 5.26e-01 0.0698 0.11 0.897 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -272800 sc-eQTL 6.47e-01 -0.0403 0.088 0.897 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -423784 sc-eQTL 6.39e-02 -0.238 0.127 0.897 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -924591 sc-eQTL 2.28e-02 0.302 0.132 0.897 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -246719 sc-eQTL 8.81e-01 -0.019 0.127 0.897 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -811814 sc-eQTL 6.43e-01 -0.0649 0.14 0.897 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -812008 sc-eQTL 1.54e-01 0.136 0.0952 0.897 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -581017 sc-eQTL 9.85e-01 0.00194 0.105 0.897 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -272800 sc-eQTL 5.56e-01 0.0689 0.117 0.897 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -233530 sc-eQTL 8.85e-01 -0.0196 0.135 0.897 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -246719 sc-eQTL 3.48e-01 0.11 0.116 0.897 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -233530 eQTL 2.56e-03 -0.0579 0.0191 0.00217 0.0 0.113

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 -233530 1.28e-06 1.31e-06 2.91e-07 1.27e-06 4.9e-07 5.83e-07 1.46e-06 3.98e-07 1.69e-06 6.73e-07 2.1e-06 9.21e-07 2.6e-06 3.26e-07 4.61e-07 1.01e-06 9.8e-07 1.1e-06 5.84e-07 4.69e-07 7e-07 1.93e-06 1.21e-06 6.43e-07 2.39e-06 8.55e-07 1.02e-06 9.59e-07 1.69e-06 1.3e-06 8.18e-07 2.62e-07 3.47e-07 5.72e-07 5.17e-07 5.58e-07 7.32e-07 3.16e-07 5.16e-07 2.23e-07 2.74e-07 2.09e-06 1.39e-07 1.33e-07 3.97e-07 2.14e-07 2.68e-07 9.26e-08 2.74e-07