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Genes within 1Mb (chr1:30484478:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.61e-01 0.0242 0.0796 0.562 B L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.80e-01 0.0854 0.0635 0.562 B L1
ENSG00000134644 PUM1 -581513 sc-eQTL 1.47e-01 0.0774 0.0532 0.562 B L1
ENSG00000162510 MATN1 -239107 sc-eQTL 5.99e-01 -0.0296 0.0562 0.562 B L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.66e-01 -0.0321 0.044 0.562 B L1
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.33e-02 -0.117 0.051 0.562 B L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 7.84e-01 0.0168 0.0611 0.562 B L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.09e-01 0.0453 0.0685 0.562 CD4T L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.95e-01 -0.00711 0.0536 0.562 CD4T L1
ENSG00000134644 PUM1 -581513 sc-eQTL 3.90e-01 0.041 0.0476 0.562 CD4T L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.57e-01 -0.0487 0.0528 0.562 CD4T L1
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.64e-01 -0.0528 0.0472 0.562 CD4T L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 7.00e-01 0.0218 0.0566 0.562 CD4T L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.57e-01 -0.0279 0.0898 0.562 CD8T L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 3.79e-01 -0.0526 0.0597 0.562 CD8T L1
ENSG00000134644 PUM1 -581513 sc-eQTL 8.51e-01 0.00993 0.0526 0.562 CD8T L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.96e-01 -0.0272 0.0511 0.562 CD8T L1
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 8.27e-01 -0.0131 0.0599 0.562 CD8T L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.16e-01 -0.093 0.075 0.562 CD8T L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.65e-02 -0.15 0.0784 0.561 DC L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.77e-01 0.00268 0.0937 0.561 DC L1
ENSG00000134644 PUM1 -581513 sc-eQTL 4.86e-01 0.0512 0.0733 0.561 DC L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.22e-01 0.0336 0.0523 0.561 DC L1
ENSG00000168528 SERINC2 -925087 sc-eQTL 2.76e-02 0.189 0.0854 0.561 DC L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.74e-01 -0.112 0.0825 0.561 DC L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 4.98e-01 -0.042 0.0618 0.562 Mono L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 5.50e-02 0.147 0.0761 0.562 Mono L1
ENSG00000134644 PUM1 -581513 sc-eQTL 8.42e-01 -0.00981 0.0492 0.562 Mono L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 6.77e-01 -0.0188 0.0452 0.562 Mono L1
ENSG00000162512 SDC3 -424280 sc-eQTL 5.43e-01 -0.0529 0.0869 0.562 Mono L1
ENSG00000168528 SERINC2 -925087 sc-eQTL 6.43e-01 -0.0433 0.0933 0.562 Mono L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.60e-01 0.101 0.0715 0.562 Mono L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 1.07e-01 -0.138 0.0852 0.562 NK L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.08e-01 -0.0143 0.0587 0.562 NK L1
ENSG00000134644 PUM1 -581513 sc-eQTL 2.37e-01 0.0727 0.0613 0.562 NK L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.85e-01 -0.0495 0.0707 0.562 NK L1
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 7.87e-01 -0.0215 0.0796 0.562 NK L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 5.11e-01 0.0483 0.0734 0.562 NK L1
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.58e-02 0.115 0.0645 0.562 Other_T L1
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.20e-02 0.117 0.069 0.562 Other_T L1
ENSG00000134644 PUM1 -581513 sc-eQTL 8.81e-01 0.00933 0.0625 0.562 Other_T L1
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.07e-01 -0.0523 0.0511 0.562 Other_T L1
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 6.62e-01 0.0367 0.0838 0.562 Other_T L1
ENSG00000287510 AL137857.1 -247215 sc-eQTL 4.85e-01 -0.061 0.0873 0.562 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -812310 sc-eQTL 8.22e-02 -0.176 0.101 0.548 B_Activated L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.14e-01 -0.0112 0.103 0.548 B_Activated L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.73e-01 -0.105 0.0951 0.548 B_Activated L2
ENSG00000162510 MATN1 -239107 sc-eQTL 9.54e-01 -0.00479 0.0834 0.548 B_Activated L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 6.59e-01 -0.0257 0.0582 0.548 B_Activated L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 8.70e-01 -0.0153 0.0939 0.548 B_Activated L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 8.10e-01 0.02 0.0831 0.548 B_Activated L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.52e-01 -0.00602 0.099 0.562 B_Intermediate L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 4.43e-01 -0.0633 0.0824 0.562 B_Intermediate L2
ENSG00000134644 PUM1 -581513 sc-eQTL 9.12e-01 0.00861 0.0778 0.562 B_Intermediate L2
ENSG00000162510 MATN1 -239107 sc-eQTL 2.96e-01 -0.0846 0.0808 0.562 B_Intermediate L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.24e-01 -0.0317 0.0497 0.562 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 3.26e-01 -0.0685 0.0696 0.562 B_Intermediate L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.84e-01 0.104 0.0778 0.562 B_Intermediate L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 3.21e-01 0.094 0.0945 0.562 B_Memory L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 5.14e-01 0.057 0.0871 0.562 B_Memory L2
ENSG00000134644 PUM1 -581513 sc-eQTL 6.91e-01 -0.0302 0.0759 0.562 B_Memory L2
ENSG00000162510 MATN1 -239107 sc-eQTL 5.96e-01 -0.0385 0.0726 0.562 B_Memory L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 2.83e-01 -0.0691 0.0642 0.562 B_Memory L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 4.25e-01 0.0588 0.0736 0.562 B_Memory L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 3.48e-01 0.081 0.0861 0.562 B_Memory L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.57e-01 -0.00464 0.0863 0.562 B_Naive1 L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.61e-01 0.00363 0.0745 0.562 B_Naive1 L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.62e-01 0.0737 0.0655 0.562 B_Naive1 L2
ENSG00000162510 MATN1 -239107 sc-eQTL 5.41e-01 -0.0408 0.0666 0.562 B_Naive1 L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.35e-01 -0.043 0.0444 0.562 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.68e-02 -0.129 0.0578 0.562 B_Naive1 L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 8.74e-01 -0.0115 0.0723 0.562 B_Naive1 L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.81e-01 -0.05 0.0905 0.56 B_Naive2 L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.41e-01 0.00553 0.0748 0.56 B_Naive2 L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.29e-01 0.088 0.0729 0.56 B_Naive2 L2
ENSG00000162510 MATN1 -239107 sc-eQTL 8.65e-01 0.012 0.0702 0.56 B_Naive2 L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 9.50e-01 -0.00298 0.0477 0.56 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.30e-01 -0.0833 0.0692 0.56 B_Naive2 L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 8.19e-01 0.0172 0.075 0.56 B_Naive2 L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.79e-01 0.00241 0.0906 0.564 CD4_CTL L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.77e-01 0.12 0.0887 0.564 CD4_CTL L2
ENSG00000134644 PUM1 -581513 sc-eQTL 3.59e-01 0.0803 0.0872 0.564 CD4_CTL L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 8.73e-01 0.0125 0.0779 0.564 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 5.86e-02 0.161 0.0845 0.564 CD4_CTL L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.58e-01 0.085 0.075 0.564 CD4_CTL L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 3.46e-01 0.0675 0.0715 0.562 CD4_Naive L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.05e-01 -0.103 0.0631 0.562 CD4_Naive L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.23e-01 0.0618 0.0505 0.562 CD4_Naive L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.64e-01 -0.0493 0.0542 0.562 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.16e-01 -0.0681 0.0549 0.562 CD4_Naive L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 5.22e-01 0.0405 0.0632 0.562 CD4_Naive L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 2.16e-01 -0.111 0.0893 0.562 CD4_TCM L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.92e-01 0.0942 0.072 0.562 CD4_TCM L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.58e-01 0.0723 0.0638 0.562 CD4_TCM L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.59e-01 -0.031 0.053 0.562 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 4.96e-01 -0.0459 0.0673 0.562 CD4_TCM L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.51e-01 -0.086 0.0748 0.562 CD4_TCM L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.52e-01 0.0536 0.09 0.562 CD4_TEM L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.93e-01 0.112 0.0855 0.562 CD4_TEM L2
ENSG00000134644 PUM1 -581513 sc-eQTL 5.48e-01 -0.043 0.0714 0.562 CD4_TEM L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.61e-01 0.0533 0.0722 0.562 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 1.92e-01 -0.11 0.0842 0.562 CD4_TEM L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 8.86e-01 0.012 0.0833 0.562 CD4_TEM L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 8.26e-01 0.0212 0.0962 0.562 CD8_CTL L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 5.28e-01 -0.0466 0.0737 0.562 CD8_CTL L2
ENSG00000134644 PUM1 -581513 sc-eQTL 9.44e-01 0.005 0.0717 0.562 CD8_CTL L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.19e-01 0.0642 0.0792 0.562 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 7.31e-01 0.0287 0.0834 0.562 CD8_CTL L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.77e-01 -0.0327 0.0784 0.562 CD8_CTL L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.22e-01 0.0319 0.0894 0.562 CD8_Naive L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.53e-01 -0.0144 0.0771 0.562 CD8_Naive L2
ENSG00000134644 PUM1 -581513 sc-eQTL 5.54e-01 0.0367 0.062 0.562 CD8_Naive L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.97e-01 -0.0504 0.0594 0.562 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 1.01e-01 -0.122 0.0738 0.562 CD8_Naive L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.95e-01 -0.0317 0.0808 0.562 CD8_Naive L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 8.97e-01 -0.0129 0.0996 0.546 CD8_TCM L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 7.60e-01 -0.0279 0.0913 0.546 CD8_TCM L2
ENSG00000134644 PUM1 -581513 sc-eQTL 8.75e-01 -0.0135 0.0858 0.546 CD8_TCM L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.67e-02 -0.187 0.0888 0.546 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 5.17e-01 0.0539 0.0831 0.546 CD8_TCM L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.73e-01 0.0356 0.084 0.546 CD8_TCM L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 4.12e-01 -0.0797 0.0969 0.559 CD8_TEM L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 9.80e-01 -0.00236 0.0931 0.559 CD8_TEM L2
ENSG00000134644 PUM1 -581513 sc-eQTL 6.66e-01 -0.041 0.0951 0.559 CD8_TEM L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.76e-01 0.05 0.0894 0.559 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 7.98e-02 -0.162 0.0921 0.559 CD8_TEM L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.29e-01 -0.127 0.0835 0.559 CD8_TEM L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 2.82e-01 0.103 0.0953 0.561 MAIT L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.47e-01 -0.0164 0.0846 0.561 MAIT L2
ENSG00000134644 PUM1 -581513 sc-eQTL 9.53e-01 0.00474 0.0811 0.561 MAIT L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 3.30e-01 -0.0746 0.0764 0.561 MAIT L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 5.17e-01 0.0553 0.0851 0.561 MAIT L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.10e-01 -0.0449 0.0878 0.561 MAIT L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 4.61e-01 -0.0707 0.0958 0.556 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 3.22e-01 0.0803 0.0809 0.556 NK_CD56bright L2
ENSG00000134644 PUM1 -581513 sc-eQTL 9.18e-01 -0.00876 0.0851 0.556 NK_CD56bright L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 1.44e-01 -0.122 0.0835 0.556 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 8.41e-01 -0.0169 0.0844 0.556 NK_CD56bright L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.33e-01 -0.0397 0.0831 0.556 NK_CD56bright L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.99e-02 -0.163 0.0895 0.562 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.28e-01 -0.0145 0.0667 0.562 NK_CD56dim L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.91e-01 0.0722 0.0683 0.562 NK_CD56dim L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.12e-01 -0.0479 0.0729 0.562 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.82e-01 -0.0984 0.0912 0.562 NK_CD56dim L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.66e-01 0.104 0.0751 0.562 NK_CD56dim L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 1.83e-01 0.126 0.0945 0.557 NK_HLA L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.51e-01 -0.122 0.0843 0.557 NK_HLA L2
ENSG00000134644 PUM1 -581513 sc-eQTL 8.91e-01 0.0113 0.0826 0.557 NK_HLA L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.35e-01 -0.0615 0.0787 0.557 NK_HLA L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 1.85e-01 0.111 0.0835 0.557 NK_HLA L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 3.93e-02 0.166 0.0802 0.557 NK_HLA L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.09e-01 -0.0453 0.0884 0.562 NK_cytokine L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 6.53e-02 0.127 0.0685 0.562 NK_cytokine L2
ENSG00000134644 PUM1 -581513 sc-eQTL 9.78e-01 0.00209 0.0746 0.562 NK_cytokine L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 9.07e-01 -0.00957 0.0822 0.562 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 3.27e-01 -0.0854 0.0869 0.562 NK_cytokine L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 9.46e-01 -0.0055 0.081 0.562 NK_cytokine L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.70e-01 0.0301 0.102 0.589 PB L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 5.49e-01 0.0713 0.119 0.589 PB L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.12e-01 0.128 0.102 0.589 PB L2
ENSG00000162510 MATN1 -239107 sc-eQTL 9.84e-01 0.00187 0.0962 0.589 PB L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 9.79e-01 -0.00181 0.0687 0.589 PB L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 6.20e-01 -0.0466 0.0939 0.589 PB L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 9.12e-02 0.168 0.0988 0.589 PB L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.03e-01 0.0367 0.0705 0.559 Pro_T L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 6.64e-01 -0.0389 0.0895 0.559 Pro_T L2
ENSG00000134644 PUM1 -581513 sc-eQTL 3.47e-01 -0.0786 0.0833 0.559 Pro_T L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 1.72e-01 -0.0817 0.0596 0.559 Pro_T L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 1.78e-01 -0.113 0.0834 0.559 Pro_T L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 3.55e-01 -0.0712 0.0768 0.559 Pro_T L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.09e-02 -0.155 0.0915 0.562 Treg L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 3.65e-01 -0.0807 0.0889 0.562 Treg L2
ENSG00000134644 PUM1 -581513 sc-eQTL 4.74e-01 -0.0511 0.0712 0.562 Treg L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 6.80e-01 -0.0337 0.0816 0.562 Treg L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 6.26e-01 0.0406 0.0831 0.562 Treg L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 9.89e-01 -0.00115 0.0831 0.562 Treg L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 1.16e-01 -0.143 0.0908 0.566 cDC L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 7.39e-01 0.0331 0.0989 0.566 cDC L2
ENSG00000134644 PUM1 -581513 sc-eQTL 3.63e-01 -0.0773 0.0848 0.566 cDC L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 2.27e-01 -0.072 0.0593 0.566 cDC L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 1.34e-01 0.114 0.076 0.566 cDC L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 9.70e-01 -0.00301 0.0809 0.566 cDC L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.79e-01 -0.00198 0.0746 0.562 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 1.14e-02 0.209 0.0819 0.562 cMono_IL1B L2
ENSG00000134644 PUM1 -581513 sc-eQTL 5.43e-01 -0.0343 0.0562 0.562 cMono_IL1B L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.69e-01 -0.0358 0.0493 0.562 cMono_IL1B L2
ENSG00000162512 SDC3 -424280 sc-eQTL 5.22e-01 -0.0596 0.093 0.562 cMono_IL1B L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 3.27e-01 -0.0923 0.094 0.562 cMono_IL1B L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 6.51e-03 0.21 0.0763 0.562 cMono_IL1B L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.48e-01 -0.0473 0.0786 0.562 cMono_S100A L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 4.74e-01 0.0666 0.0928 0.562 cMono_S100A L2
ENSG00000134644 PUM1 -581513 sc-eQTL 4.32e-01 0.0529 0.0671 0.562 cMono_S100A L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 6.31e-01 0.0248 0.0516 0.562 cMono_S100A L2
ENSG00000162512 SDC3 -424280 sc-eQTL 7.33e-01 -0.0304 0.0892 0.562 cMono_S100A L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 8.70e-01 0.0155 0.0944 0.562 cMono_S100A L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.56e-01 0.109 0.0767 0.562 cMono_S100A L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.19e-01 0.0599 0.12 0.527 gdT L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 5.88e-01 -0.0561 0.103 0.527 gdT L2
ENSG00000134644 PUM1 -581513 sc-eQTL 1.59e-01 0.15 0.106 0.527 gdT L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.53e-01 0.0689 0.116 0.527 gdT L2
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 9.76e-01 -0.00324 0.107 0.527 gdT L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.89e-01 0.11 0.103 0.527 gdT L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.70e-01 -0.0252 0.0859 0.558 intMono L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.34e-01 0.0193 0.0923 0.558 intMono L2
ENSG00000134644 PUM1 -581513 sc-eQTL 2.92e-01 -0.0825 0.0781 0.558 intMono L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.32e-01 -0.0483 0.0613 0.558 intMono L2
ENSG00000162512 SDC3 -424280 sc-eQTL 4.53e-01 -0.0632 0.084 0.558 intMono L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 6.03e-01 0.0459 0.088 0.558 intMono L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 3.17e-01 0.0835 0.0833 0.558 intMono L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 9.39e-01 0.00634 0.0822 0.563 ncMono L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.10e-01 -0.0211 0.0876 0.563 ncMono L2
ENSG00000134644 PUM1 -581513 sc-eQTL 4.36e-01 -0.0558 0.0715 0.563 ncMono L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.46e-01 -0.0392 0.065 0.563 ncMono L2
ENSG00000162512 SDC3 -424280 sc-eQTL 5.06e-01 -0.0485 0.0728 0.563 ncMono L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 1.56e-01 0.113 0.0791 0.563 ncMono L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 4.83e-01 -0.0579 0.0823 0.563 ncMono L2
ENSG00000060688 SNRNP40 -812310 sc-eQTL 5.87e-01 -0.0516 0.0947 0.554 pDC L2
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 2.00e-01 0.133 0.103 0.554 pDC L2
ENSG00000134644 PUM1 -581513 sc-eQTL 1.88e-01 0.114 0.0858 0.554 pDC L2
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.34e-01 0.0628 0.08 0.554 pDC L2
ENSG00000168528 SERINC2 -925087 sc-eQTL 4.77e-02 0.192 0.096 0.554 pDC L2
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.08e-01 -0.112 0.0883 0.554 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -812310 sc-eQTL 4.24e-01 0.0744 0.0928 0.562 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 6.64e-01 0.0336 0.0773 0.562 B_Memory LOneK1K
ENSG00000134644 PUM1 -581513 sc-eQTL 4.76e-01 -0.0489 0.0685 0.562 B_Memory LOneK1K
ENSG00000162510 MATN1 -239107 sc-eQTL 1.37e-01 -0.116 0.0777 0.562 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.10e-01 -0.0405 0.049 0.562 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 8.59e-01 -0.0116 0.0649 0.562 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -247215 sc-eQTL 4.17e-01 0.0574 0.0707 0.562 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -812310 sc-eQTL 7.30e-01 -0.0289 0.0838 0.562 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 7.86e-01 0.018 0.0662 0.562 B_Naive LOneK1K
ENSG00000134644 PUM1 -581513 sc-eQTL 5.24e-02 0.121 0.0621 0.562 B_Naive LOneK1K
ENSG00000162510 MATN1 -239107 sc-eQTL 4.41e-01 -0.0465 0.0603 0.562 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.43e-01 -0.0326 0.0424 0.562 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 2.36e-02 -0.124 0.0542 0.562 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -247215 sc-eQTL 8.36e-01 0.0135 0.0652 0.562 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.33e-01 -0.0339 0.0709 0.562 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 3.07e-02 0.173 0.0794 0.562 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -581513 sc-eQTL 8.91e-01 0.00701 0.0512 0.562 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -273296 sc-eQTL 7.50e-01 -0.0144 0.045 0.562 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -424280 sc-eQTL 3.58e-01 -0.0844 0.0917 0.562 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -925087 sc-eQTL 6.49e-01 -0.0431 0.0944 0.562 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -247215 sc-eQTL 1.55e-02 0.175 0.0715 0.562 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -812310 sc-eQTL 6.35e-01 -0.0366 0.0769 0.562 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 6.58e-01 0.0373 0.0842 0.562 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -581513 sc-eQTL 6.97e-01 -0.0269 0.069 0.562 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -273296 sc-eQTL 4.39e-01 -0.0428 0.0551 0.562 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -424280 sc-eQTL 4.12e-01 -0.0661 0.0805 0.562 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -925087 sc-eQTL 3.67e-01 0.0754 0.0834 0.562 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -247215 sc-eQTL 7.52e-01 -0.0252 0.0794 0.562 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -812310 sc-eQTL 1.01e-01 -0.141 0.0856 0.562 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -812504 sc-eQTL 8.80e-01 -0.00888 0.0588 0.562 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -581513 sc-eQTL 3.50e-01 0.0603 0.0643 0.562 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -273296 sc-eQTL 5.45e-01 -0.0436 0.072 0.562 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -234026 sc-eQTL 5.00e-01 -0.0561 0.083 0.562 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -247215 sc-eQTL 2.41e-01 0.084 0.0715 0.562 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000186056 MATN1-AS1 -234026 eQTL 1.03e-02 -0.0318 0.0124 0.00133 0.0 0.45

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000186056 MATN1-AS1 -234026 1.3e-06 1.08e-06 3.3e-07 1.17e-06 3.51e-07 5.88e-07 1.57e-06 3.69e-07 1.5e-06 5.15e-07 1.88e-06 7e-07 2.38e-06 2.83e-07 5.31e-07 9.33e-07 9.2e-07 7.72e-07 8.48e-07 6.49e-07 7.72e-07 1.6e-06 9.66e-07 6.33e-07 2.26e-06 5.67e-07 8.99e-07 7.45e-07 1.46e-06 1.24e-06 7.8e-07 1.54e-07 2.19e-07 6.86e-07 5.21e-07 4.42e-07 6.19e-07 1.9e-07 4.12e-07 2.91e-07 2.79e-07 1.62e-06 8.26e-08 5.67e-08 2.16e-07 1.38e-07 2.33e-07 8.25e-08 9.42e-08