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Genes within 1Mb (chr1:30465413:T:C):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.96e-01 0.0954 0.0736 0.504 B L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 9.67e-02 0.0981 0.0588 0.504 B L1
ENSG00000134644 PUM1 -600578 sc-eQTL 2.94e-01 0.052 0.0495 0.504 B L1
ENSG00000162510 MATN1 -258172 sc-eQTL 6.24e-01 -0.0256 0.0522 0.504 B L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 2.58e-01 -0.0462 0.0407 0.504 B L1
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 3.73e-03 -0.138 0.0469 0.504 B L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 7.91e-01 0.0151 0.0567 0.504 B L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.10e-02 0.137 0.0629 0.504 CD4T L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.79e-01 0.0667 0.0495 0.504 CD4T L1
ENSG00000134644 PUM1 -600578 sc-eQTL 2.70e-01 0.0487 0.0441 0.504 CD4T L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 3.46e-01 0.0461 0.0489 0.504 CD4T L1
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 7.82e-01 -0.0121 0.0438 0.504 CD4T L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 3.16e-01 0.0527 0.0524 0.504 CD4T L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 7.31e-01 0.0287 0.0835 0.504 CD8T L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 6.74e-01 -0.0234 0.0555 0.504 CD8T L1
ENSG00000134644 PUM1 -600578 sc-eQTL 1.22e-01 0.0755 0.0486 0.504 CD8T L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 7.11e-01 -0.0176 0.0475 0.504 CD8T L1
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 6.28e-01 -0.027 0.0556 0.504 CD8T L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 5.86e-02 -0.132 0.0694 0.504 CD8T L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 4.56e-01 -0.0554 0.0741 0.511 DC L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 8.89e-01 0.0123 0.0879 0.511 DC L1
ENSG00000134644 PUM1 -600578 sc-eQTL 8.45e-02 0.118 0.0683 0.511 DC L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.09e-01 0.0325 0.0491 0.511 DC L1
ENSG00000168528 SERINC2 -944152 sc-eQTL 2.51e-01 0.093 0.0808 0.511 DC L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 5.32e-01 -0.0487 0.0777 0.511 DC L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 4.69e-01 0.0425 0.0585 0.504 Mono L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.13e-01 0.115 0.0722 0.504 Mono L1
ENSG00000134644 PUM1 -600578 sc-eQTL 6.08e-01 0.0239 0.0465 0.504 Mono L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.67e-01 0.0246 0.0428 0.504 Mono L1
ENSG00000162512 SDC3 -443345 sc-eQTL 8.32e-01 -0.0175 0.0823 0.504 Mono L1
ENSG00000168528 SERINC2 -944152 sc-eQTL 7.06e-02 -0.159 0.0877 0.504 Mono L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 8.44e-01 0.0134 0.068 0.504 Mono L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.72e-01 -0.045 0.0795 0.504 NK L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 7.80e-01 -0.0152 0.0545 0.504 NK L1
ENSG00000134644 PUM1 -600578 sc-eQTL 9.92e-02 0.094 0.0568 0.504 NK L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 3.40e-01 -0.0628 0.0656 0.504 NK L1
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 2.45e-01 0.0858 0.0736 0.504 NK L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 3.89e-01 -0.0588 0.0681 0.504 NK L1
ENSG00000060688 SNRNP40 -831375 sc-eQTL 6.82e-01 0.0248 0.0604 0.504 Other_T L1
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 8.41e-02 0.111 0.0642 0.504 Other_T L1
ENSG00000134644 PUM1 -600578 sc-eQTL 7.20e-01 -0.0209 0.0581 0.504 Other_T L1
ENSG00000162511 LAPTM5 -292361 sc-eQTL 8.28e-01 -0.0104 0.0476 0.504 Other_T L1
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 8.53e-01 0.0145 0.078 0.504 Other_T L1
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.92e-01 -0.106 0.0809 0.504 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -831375 sc-eQTL 6.96e-01 -0.0384 0.0982 0.485 B_Activated L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 3.23e-01 0.098 0.0988 0.485 B_Activated L2
ENSG00000134644 PUM1 -600578 sc-eQTL 1.72e-01 -0.126 0.0916 0.485 B_Activated L2
ENSG00000162510 MATN1 -258172 sc-eQTL 3.78e-01 0.071 0.0803 0.485 B_Activated L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 1.43e-01 -0.082 0.0558 0.485 B_Activated L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 6.97e-01 0.0353 0.0906 0.485 B_Activated L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 6.01e-01 0.0419 0.0801 0.485 B_Activated L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.10e-01 0.115 0.0911 0.504 B_Intermediate L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 5.76e-01 -0.0426 0.0761 0.504 B_Intermediate L2
ENSG00000134644 PUM1 -600578 sc-eQTL 5.91e-01 0.0387 0.0718 0.504 B_Intermediate L2
ENSG00000162510 MATN1 -258172 sc-eQTL 4.86e-01 -0.0522 0.0747 0.504 B_Intermediate L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 4.31e-01 -0.0361 0.0458 0.504 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 2.66e-01 -0.0717 0.0642 0.504 B_Intermediate L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.73e-01 0.098 0.0718 0.504 B_Intermediate L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 8.62e-01 0.0152 0.0873 0.504 B_Memory L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 7.13e-02 0.145 0.0798 0.504 B_Memory L2
ENSG00000134644 PUM1 -600578 sc-eQTL 5.17e-01 -0.0454 0.0699 0.504 B_Memory L2
ENSG00000162510 MATN1 -258172 sc-eQTL 4.07e-01 0.0555 0.0669 0.504 B_Memory L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 8.41e-01 -0.0119 0.0593 0.504 B_Memory L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 5.77e-01 -0.0379 0.0679 0.504 B_Memory L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 5.96e-01 0.0422 0.0795 0.504 B_Memory L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.86e-01 0.0705 0.0811 0.504 B_Naive1 L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 8.17e-01 -0.0163 0.0702 0.504 B_Naive1 L2
ENSG00000134644 PUM1 -600578 sc-eQTL 4.30e-01 0.0489 0.0618 0.504 B_Naive1 L2
ENSG00000162510 MATN1 -258172 sc-eQTL 5.55e-01 -0.0371 0.0628 0.504 B_Naive1 L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 2.07e-01 -0.0529 0.0418 0.504 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 1.89e-02 -0.129 0.0544 0.504 B_Naive1 L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 7.17e-01 -0.0247 0.0681 0.504 B_Naive1 L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.98e-01 0.0731 0.0864 0.502 B_Naive2 L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 4.95e-01 0.0488 0.0713 0.502 B_Naive2 L2
ENSG00000134644 PUM1 -600578 sc-eQTL 5.13e-01 0.0457 0.0698 0.502 B_Naive2 L2
ENSG00000162510 MATN1 -258172 sc-eQTL 8.05e-01 -0.0166 0.0671 0.502 B_Naive2 L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 6.00e-01 -0.0239 0.0455 0.502 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 5.39e-01 -0.0408 0.0663 0.502 B_Naive2 L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 6.66e-01 -0.0309 0.0716 0.502 B_Naive2 L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.91e-01 0.046 0.0853 0.502 CD4_CTL L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 3.40e-01 0.0802 0.0838 0.502 CD4_CTL L2
ENSG00000134644 PUM1 -600578 sc-eQTL 4.26e-02 0.166 0.0815 0.502 CD4_CTL L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.39e-01 0.0452 0.0733 0.502 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 1.74e-02 0.19 0.0791 0.502 CD4_CTL L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 9.42e-02 0.118 0.0704 0.502 CD4_CTL L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.37e-01 0.0989 0.0663 0.504 CD4_Naive L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 5.71e-01 0.0335 0.059 0.504 CD4_Naive L2
ENSG00000134644 PUM1 -600578 sc-eQTL 1.19e-01 0.0734 0.0469 0.504 CD4_Naive L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 3.45e-01 0.0477 0.0504 0.504 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 9.28e-01 0.00464 0.0513 0.504 CD4_Naive L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 2.47e-01 0.0681 0.0587 0.504 CD4_Naive L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.09e-01 0.133 0.083 0.504 CD4_TCM L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.91e-01 0.0879 0.0671 0.504 CD4_TCM L2
ENSG00000134644 PUM1 -600578 sc-eQTL 2.54e-01 0.068 0.0594 0.504 CD4_TCM L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 3.38e-01 0.0473 0.0493 0.504 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 2.52e-01 -0.0718 0.0626 0.504 CD4_TCM L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 8.12e-01 0.0167 0.0699 0.504 CD4_TCM L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.34e-01 0.125 0.0833 0.504 CD4_TEM L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 4.85e-01 0.0558 0.0797 0.504 CD4_TEM L2
ENSG00000134644 PUM1 -600578 sc-eQTL 8.16e-01 -0.0155 0.0665 0.504 CD4_TEM L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 6.53e-01 0.0303 0.0672 0.504 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 5.31e-01 -0.0494 0.0786 0.504 CD4_TEM L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 4.90e-01 -0.0535 0.0774 0.504 CD4_TEM L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.57e-01 0.053 0.0901 0.504 CD8_CTL L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 3.26e-01 -0.0679 0.069 0.504 CD8_CTL L2
ENSG00000134644 PUM1 -600578 sc-eQTL 6.17e-01 0.0336 0.0671 0.504 CD8_CTL L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 7.07e-01 0.028 0.0743 0.504 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 8.06e-01 0.0193 0.0782 0.504 CD8_CTL L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.49e-01 -0.106 0.0732 0.504 CD8_CTL L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 7.75e-01 0.0241 0.084 0.504 CD8_Naive L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 4.94e-01 0.0496 0.0724 0.504 CD8_Naive L2
ENSG00000134644 PUM1 -600578 sc-eQTL 1.10e-01 0.093 0.058 0.504 CD8_Naive L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 4.79e-01 0.0396 0.0558 0.504 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 6.54e-01 -0.0313 0.0697 0.504 CD8_Naive L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.35e-01 -0.113 0.0756 0.504 CD8_Naive L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.32e-01 -0.0569 0.0909 0.493 CD8_TCM L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 2.80e-01 -0.0901 0.0831 0.493 CD8_TCM L2
ENSG00000134644 PUM1 -600578 sc-eQTL 6.99e-01 0.0303 0.0784 0.493 CD8_TCM L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 1.79e-01 -0.11 0.0817 0.493 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 6.28e-01 0.0369 0.0759 0.493 CD8_TCM L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 9.95e-01 0.000459 0.0768 0.493 CD8_TCM L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.06e-01 -0.114 0.0903 0.495 CD8_TEM L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 6.40e-01 0.0407 0.0869 0.495 CD8_TEM L2
ENSG00000134644 PUM1 -600578 sc-eQTL 6.39e-01 -0.0418 0.0888 0.495 CD8_TEM L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.29e-01 0.0527 0.0835 0.495 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 3.73e-01 -0.0774 0.0865 0.495 CD8_TEM L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 2.87e-01 -0.0836 0.0783 0.495 CD8_TEM L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.22e-01 0.0878 0.0884 0.502 MAIT L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.33e-01 0.118 0.0781 0.502 MAIT L2
ENSG00000134644 PUM1 -600578 sc-eQTL 9.98e-01 -0.000181 0.0753 0.502 MAIT L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 6.88e-01 -0.0285 0.071 0.502 MAIT L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 7.26e-01 0.0278 0.0791 0.502 MAIT L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 4.71e-01 -0.0588 0.0814 0.502 MAIT L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 7.64e-01 -0.027 0.0899 0.496 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 9.01e-01 0.00947 0.076 0.496 NK_CD56bright L2
ENSG00000134644 PUM1 -600578 sc-eQTL 4.39e-01 0.0618 0.0797 0.496 NK_CD56bright L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 9.43e-01 0.00565 0.0787 0.496 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 7.00e-01 0.0306 0.0791 0.496 NK_CD56bright L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 7.09e-01 -0.0291 0.0779 0.496 NK_CD56bright L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.08e-01 -0.086 0.0842 0.504 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 8.47e-01 -0.0121 0.0624 0.504 NK_CD56dim L2
ENSG00000134644 PUM1 -600578 sc-eQTL 2.46e-01 0.0742 0.0638 0.504 NK_CD56dim L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 4.49e-01 -0.0517 0.0682 0.504 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 9.80e-01 0.0021 0.0855 0.504 NK_CD56dim L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 9.59e-01 0.00364 0.0706 0.504 NK_CD56dim L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 8.24e-01 0.0198 0.0889 0.502 NK_HLA L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 2.08e-01 -0.0999 0.0791 0.502 NK_HLA L2
ENSG00000134644 PUM1 -600578 sc-eQTL 7.76e-01 -0.022 0.0774 0.502 NK_HLA L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 1.18e-01 -0.115 0.0734 0.502 NK_HLA L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 4.80e-01 0.0555 0.0785 0.502 NK_HLA L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 4.15e-01 -0.0619 0.0758 0.502 NK_HLA L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.77e-01 0.0462 0.0827 0.504 NK_cytokine L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 2.03e-01 0.0821 0.0643 0.504 NK_cytokine L2
ENSG00000134644 PUM1 -600578 sc-eQTL 9.73e-02 0.116 0.0694 0.504 NK_cytokine L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 1.63e-01 -0.107 0.0765 0.504 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 7.02e-01 0.0312 0.0814 0.504 NK_cytokine L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 7.71e-01 -0.0221 0.0758 0.504 NK_cytokine L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.65e-01 0.0567 0.0984 0.526 PB L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 7.70e-01 -0.0334 0.114 0.526 PB L2
ENSG00000134644 PUM1 -600578 sc-eQTL 6.88e-01 0.0399 0.0992 0.526 PB L2
ENSG00000162510 MATN1 -258172 sc-eQTL 7.66e-02 0.163 0.0913 0.526 PB L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 9.62e-01 -0.00316 0.0661 0.526 PB L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 1.93e-01 0.118 0.0898 0.526 PB L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 8.88e-01 0.0136 0.0963 0.526 PB L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 7.91e-01 -0.0176 0.0663 0.498 Pro_T L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 5.84e-01 -0.0462 0.0842 0.498 Pro_T L2
ENSG00000134644 PUM1 -600578 sc-eQTL 4.65e-02 -0.156 0.0778 0.498 Pro_T L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 7.68e-01 -0.0167 0.0563 0.498 Pro_T L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 2.13e-01 -0.098 0.0785 0.498 Pro_T L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 2.74e-01 -0.0791 0.0722 0.498 Pro_T L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.54e-01 -0.0981 0.0857 0.504 Treg L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 7.04e-01 -0.0316 0.0831 0.504 Treg L2
ENSG00000134644 PUM1 -600578 sc-eQTL 2.01e-01 -0.0849 0.0663 0.504 Treg L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 9.61e-01 -0.0037 0.0762 0.504 Treg L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 5.74e-01 0.0436 0.0776 0.504 Treg L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 3.92e-01 -0.0664 0.0774 0.504 Treg L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 9.91e-01 0.000945 0.0858 0.507 cDC L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.23e-01 0.143 0.0923 0.507 cDC L2
ENSG00000134644 PUM1 -600578 sc-eQTL 7.76e-01 0.0228 0.0798 0.507 cDC L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.65e-01 -0.0322 0.0559 0.507 cDC L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 7.60e-01 0.022 0.0718 0.507 cDC L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 6.35e-01 0.0361 0.0759 0.507 cDC L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 4.48e-01 0.0536 0.0706 0.504 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 7.70e-02 0.139 0.0783 0.504 cMono_IL1B L2
ENSG00000134644 PUM1 -600578 sc-eQTL 9.10e-01 -0.00602 0.0534 0.504 cMono_IL1B L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 7.01e-01 -0.018 0.0468 0.504 cMono_IL1B L2
ENSG00000162512 SDC3 -443345 sc-eQTL 5.90e-01 -0.0476 0.0882 0.504 cMono_IL1B L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 1.78e-02 -0.21 0.0881 0.504 cMono_IL1B L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 5.15e-01 0.048 0.0736 0.504 cMono_IL1B L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.43e-01 0.109 0.0739 0.504 cMono_S100A L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 2.16e-01 0.109 0.0875 0.504 cMono_S100A L2
ENSG00000134644 PUM1 -600578 sc-eQTL 5.57e-01 0.0373 0.0634 0.504 cMono_S100A L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 3.39e-01 0.0466 0.0487 0.504 cMono_S100A L2
ENSG00000162512 SDC3 -443345 sc-eQTL 3.36e-01 0.0811 0.0841 0.504 cMono_S100A L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 4.26e-01 -0.071 0.0891 0.504 cMono_S100A L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 2.00e-01 0.0931 0.0725 0.504 cMono_S100A L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.38e-01 -0.128 0.108 0.479 gdT L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 8.83e-01 -0.0137 0.093 0.479 gdT L2
ENSG00000134644 PUM1 -600578 sc-eQTL 2.32e-01 0.115 0.0954 0.479 gdT L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 7.32e-01 0.0358 0.104 0.479 gdT L2
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 3.42e-01 -0.0915 0.0959 0.479 gdT L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 9.54e-01 -0.00535 0.0932 0.479 gdT L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 4.66e-01 -0.0586 0.0803 0.5 intMono L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 9.55e-01 -0.00486 0.0864 0.5 intMono L2
ENSG00000134644 PUM1 -600578 sc-eQTL 7.43e-01 -0.0241 0.0733 0.5 intMono L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 9.05e-01 0.00687 0.0575 0.5 intMono L2
ENSG00000162512 SDC3 -443345 sc-eQTL 2.24e-01 -0.0957 0.0785 0.5 intMono L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 3.18e-01 -0.0824 0.0823 0.5 intMono L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 2.19e-01 0.096 0.0779 0.5 intMono L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 8.22e-01 -0.017 0.0759 0.505 ncMono L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 2.93e-01 -0.0851 0.0807 0.505 ncMono L2
ENSG00000134644 PUM1 -600578 sc-eQTL 6.40e-01 0.031 0.0661 0.505 ncMono L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 6.07e-01 -0.0309 0.06 0.505 ncMono L2
ENSG00000162512 SDC3 -443345 sc-eQTL 3.78e-01 -0.0594 0.0672 0.505 ncMono L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 3.91e-01 0.0631 0.0733 0.505 ncMono L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 4.97e-01 -0.0518 0.076 0.505 ncMono L2
ENSG00000060688 SNRNP40 -831375 sc-eQTL 6.46e-01 -0.0402 0.0874 0.497 pDC L2
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 1.95e-01 0.124 0.0955 0.497 pDC L2
ENSG00000134644 PUM1 -600578 sc-eQTL 1.33e-01 0.119 0.079 0.497 pDC L2
ENSG00000162511 LAPTM5 -292361 sc-eQTL 4.15e-01 0.0603 0.0738 0.497 pDC L2
ENSG00000168528 SERINC2 -944152 sc-eQTL 5.92e-01 -0.0481 0.0896 0.497 pDC L2
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.92e-01 -0.107 0.0815 0.497 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -831375 sc-eQTL 1.68e-01 0.117 0.0849 0.504 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 3.43e-01 0.0674 0.0708 0.504 B_Memory LOneK1K
ENSG00000134644 PUM1 -600578 sc-eQTL 8.77e-01 -0.00976 0.0629 0.504 B_Memory LOneK1K
ENSG00000162510 MATN1 -258172 sc-eQTL 3.91e-01 -0.0615 0.0716 0.504 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -292361 sc-eQTL 6.63e-01 0.0197 0.045 0.504 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 7.03e-01 -0.0227 0.0596 0.504 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -266280 sc-eQTL 1.46e-01 0.0944 0.0646 0.504 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -831375 sc-eQTL 3.88e-01 0.0683 0.079 0.504 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 6.49e-01 0.0285 0.0625 0.504 B_Naive LOneK1K
ENSG00000134644 PUM1 -600578 sc-eQTL 1.72e-01 0.0808 0.0589 0.504 B_Naive LOneK1K
ENSG00000162510 MATN1 -258172 sc-eQTL 4.73e-01 -0.0409 0.0569 0.504 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -292361 sc-eQTL 2.47e-01 -0.0464 0.04 0.504 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 1.17e-02 -0.13 0.051 0.504 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -266280 sc-eQTL 9.06e-01 0.00726 0.0615 0.504 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.02e-01 0.0859 0.0672 0.504 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 3.18e-02 0.163 0.0755 0.504 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -600578 sc-eQTL 7.94e-01 0.0127 0.0487 0.504 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -292361 sc-eQTL 5.95e-01 0.0228 0.0428 0.504 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -443345 sc-eQTL 8.34e-01 0.0184 0.0873 0.504 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -944152 sc-eQTL 6.11e-02 -0.168 0.0891 0.504 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -266280 sc-eQTL 3.86e-01 0.0598 0.0688 0.504 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -831375 sc-eQTL 2.04e-01 -0.0909 0.0714 0.504 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 4.59e-01 -0.0581 0.0783 0.504 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -600578 sc-eQTL 2.78e-01 0.0697 0.0641 0.504 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -292361 sc-eQTL 8.58e-01 -0.0092 0.0514 0.504 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -443345 sc-eQTL 1.58e-01 -0.106 0.0747 0.504 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -944152 sc-eQTL 7.11e-01 -0.0288 0.0778 0.504 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -266280 sc-eQTL 7.46e-01 0.024 0.074 0.504 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -831375 sc-eQTL 5.97e-01 -0.0424 0.08 0.504 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -831569 sc-eQTL 9.35e-01 -0.00445 0.0547 0.504 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -600578 sc-eQTL 1.43e-01 0.0876 0.0596 0.504 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -292361 sc-eQTL 2.33e-01 -0.0797 0.0667 0.504 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -253091 sc-eQTL 5.17e-01 0.0501 0.0771 0.504 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -266280 sc-eQTL 4.79e-01 -0.0472 0.0665 0.504 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -831569 eQTL 4.83e-02 -0.0362 0.0183 0.0 0.0 0.485

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina