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Genes within 1Mb (chr1:30453105:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.01e-01 -0.0761 0.0734 0.504 B L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 8.11e-02 -0.103 0.0585 0.504 B L1
ENSG00000134644 PUM1 -612886 sc-eQTL 1.64e-01 -0.0687 0.0492 0.504 B L1
ENSG00000162510 MATN1 -270480 sc-eQTL 4.92e-01 0.0357 0.0519 0.504 B L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 4.51e-01 0.0307 0.0406 0.504 B L1
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 1.93e-02 0.111 0.0471 0.504 B L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.25e-01 -0.0276 0.0564 0.504 B L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.90e-02 -0.13 0.0627 0.504 CD4T L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.39e-01 -0.0731 0.0492 0.504 CD4T L1
ENSG00000134644 PUM1 -612886 sc-eQTL 2.18e-01 -0.0542 0.0439 0.504 CD4T L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 4.52e-01 -0.0367 0.0488 0.504 CD4T L1
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 6.37e-01 0.0207 0.0437 0.504 CD4T L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 2.89e-01 -0.0555 0.0522 0.504 CD4T L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 8.20e-01 -0.0189 0.083 0.504 CD8T L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 8.81e-01 0.00827 0.0552 0.504 CD8T L1
ENSG00000134644 PUM1 -612886 sc-eQTL 2.41e-01 -0.057 0.0485 0.504 CD8T L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.25e-01 0.0301 0.0472 0.504 CD8T L1
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 6.72e-01 0.0235 0.0553 0.504 CD8T L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 4.54e-02 0.139 0.0689 0.504 CD8T L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 5.71e-01 0.0415 0.0731 0.498 DC L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 7.55e-01 -0.0271 0.0866 0.498 DC L1
ENSG00000134644 PUM1 -612886 sc-eQTL 7.10e-02 -0.122 0.0673 0.498 DC L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 6.99e-01 -0.0188 0.0484 0.498 DC L1
ENSG00000168528 SERINC2 -956460 sc-eQTL 2.56e-01 -0.0908 0.0796 0.498 DC L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.30e-01 0.037 0.0766 0.498 DC L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.22e-01 -0.0207 0.0581 0.504 Mono L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.09e-01 -0.115 0.0716 0.504 Mono L1
ENSG00000134644 PUM1 -612886 sc-eQTL 5.79e-01 -0.0256 0.0462 0.504 Mono L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.27e-01 -0.00927 0.0425 0.504 Mono L1
ENSG00000162512 SDC3 -455653 sc-eQTL 8.24e-01 0.0182 0.0816 0.504 Mono L1
ENSG00000168528 SERINC2 -956460 sc-eQTL 1.19e-01 0.136 0.0871 0.504 Mono L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 8.65e-01 -0.0115 0.0674 0.504 Mono L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 5.61e-01 0.0462 0.0793 0.504 NK L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 9.20e-01 0.00548 0.0543 0.504 NK L1
ENSG00000134644 PUM1 -612886 sc-eQTL 7.45e-02 -0.101 0.0565 0.504 NK L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 3.03e-01 0.0675 0.0654 0.504 NK L1
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 2.17e-01 -0.0909 0.0734 0.504 NK L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 5.67e-01 0.039 0.068 0.504 NK L1
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.83e-01 -0.0166 0.0602 0.504 Other_T L1
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.56e-02 -0.123 0.0638 0.504 Other_T L1
ENSG00000134644 PUM1 -612886 sc-eQTL 8.07e-01 0.0141 0.0579 0.504 Other_T L1
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.16e-01 0.0111 0.0474 0.504 Other_T L1
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 9.30e-01 -0.00679 0.0777 0.504 Other_T L1
ENSG00000287510 AL137857.1 -278588 sc-eQTL 2.17e-01 0.0999 0.0807 0.504 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.45e-01 0.0317 0.0973 0.526 B_Activated L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.69e-01 -0.108 0.0978 0.526 B_Activated L2
ENSG00000134644 PUM1 -612886 sc-eQTL 1.71e-01 0.125 0.0907 0.526 B_Activated L2
ENSG00000162510 MATN1 -270480 sc-eQTL 2.15e-01 -0.0988 0.0793 0.526 B_Activated L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 1.65e-01 0.0771 0.0553 0.526 B_Activated L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 6.07e-01 -0.0462 0.0897 0.526 B_Activated L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 5.42e-01 -0.0485 0.0793 0.526 B_Activated L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.76e-01 -0.0805 0.0907 0.504 B_Intermediate L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 6.75e-01 0.0318 0.0757 0.504 B_Intermediate L2
ENSG00000134644 PUM1 -612886 sc-eQTL 4.16e-01 -0.0581 0.0713 0.504 B_Intermediate L2
ENSG00000162510 MATN1 -270480 sc-eQTL 1.89e-01 0.0975 0.074 0.504 B_Intermediate L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.55e-01 0.0269 0.0456 0.504 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 3.06e-01 0.0655 0.0639 0.504 B_Intermediate L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.64e-02 -0.131 0.0711 0.504 B_Intermediate L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 9.40e-01 0.00653 0.0869 0.504 B_Memory L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.31e-02 -0.154 0.0793 0.504 B_Memory L2
ENSG00000134644 PUM1 -612886 sc-eQTL 6.04e-01 0.0361 0.0696 0.504 B_Memory L2
ENSG00000162510 MATN1 -270480 sc-eQTL 4.78e-01 -0.0473 0.0665 0.504 B_Memory L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 9.38e-01 -0.0046 0.0591 0.504 B_Memory L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 8.56e-01 0.0123 0.0676 0.504 B_Memory L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 4.34e-01 -0.062 0.079 0.504 B_Memory L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.37e-01 -0.0272 0.0807 0.504 B_Naive1 L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 9.97e-01 0.000296 0.0697 0.504 B_Naive1 L2
ENSG00000134644 PUM1 -612886 sc-eQTL 3.62e-01 -0.0561 0.0614 0.504 B_Naive1 L2
ENSG00000162510 MATN1 -270480 sc-eQTL 5.20e-01 0.0402 0.0623 0.504 B_Naive1 L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 2.25e-01 0.0506 0.0415 0.504 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 1.00e-01 0.0899 0.0544 0.504 B_Naive1 L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 8.91e-01 0.00926 0.0676 0.504 B_Naive1 L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 4.21e-01 -0.0693 0.086 0.506 B_Naive2 L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.73e-01 -0.0401 0.071 0.506 B_Naive2 L2
ENSG00000134644 PUM1 -612886 sc-eQTL 3.77e-01 -0.0615 0.0694 0.506 B_Naive2 L2
ENSG00000162510 MATN1 -270480 sc-eQTL 7.42e-01 0.022 0.0668 0.506 B_Naive2 L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 6.81e-01 0.0186 0.0453 0.506 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 8.07e-01 0.0161 0.066 0.506 B_Naive2 L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 7.61e-01 0.0218 0.0713 0.506 B_Naive2 L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 6.32e-01 -0.0405 0.0844 0.507 CD4_CTL L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.36e-01 -0.0983 0.0828 0.507 CD4_CTL L2
ENSG00000134644 PUM1 -612886 sc-eQTL 4.19e-02 -0.165 0.0806 0.507 CD4_CTL L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 7.99e-01 -0.0185 0.0726 0.507 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 1.47e-02 -0.192 0.0782 0.507 CD4_CTL L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.59e-02 -0.129 0.0695 0.507 CD4_CTL L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 1.63e-01 -0.0923 0.0659 0.504 CD4_Naive L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.93e-01 -0.0314 0.0586 0.504 CD4_Naive L2
ENSG00000134644 PUM1 -612886 sc-eQTL 8.19e-02 -0.0813 0.0465 0.504 CD4_Naive L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 4.26e-01 -0.04 0.0501 0.504 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 8.50e-01 0.00967 0.0509 0.504 CD4_Naive L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 3.26e-01 -0.0574 0.0584 0.504 CD4_Naive L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 1.43e-01 -0.122 0.0826 0.504 CD4_TCM L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.42e-01 -0.0783 0.0667 0.504 CD4_TCM L2
ENSG00000134644 PUM1 -612886 sc-eQTL 1.69e-01 -0.0815 0.059 0.504 CD4_TCM L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 3.27e-01 -0.0482 0.049 0.504 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 1.89e-01 0.0818 0.0621 0.504 CD4_TCM L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.64e-01 -0.0302 0.0694 0.504 CD4_TCM L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 1.56e-01 -0.118 0.0828 0.504 CD4_TEM L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 4.15e-01 -0.0646 0.0792 0.504 CD4_TEM L2
ENSG00000134644 PUM1 -612886 sc-eQTL 8.88e-01 0.0093 0.066 0.504 CD4_TEM L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.27e-01 -0.0147 0.0668 0.504 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 7.08e-01 0.0293 0.0781 0.504 CD4_TEM L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 2.95e-01 0.0806 0.0768 0.504 CD4_TEM L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 6.67e-01 -0.0386 0.0896 0.504 CD8_CTL L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.55e-01 0.0406 0.0687 0.504 CD8_CTL L2
ENSG00000134644 PUM1 -612886 sc-eQTL 9.10e-01 0.00758 0.0667 0.504 CD8_CTL L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 7.94e-01 -0.0193 0.0739 0.504 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 7.18e-01 -0.0281 0.0777 0.504 CD8_CTL L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 1.35e-01 0.109 0.0727 0.504 CD8_CTL L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 8.52e-01 -0.0156 0.0832 0.504 CD8_Naive L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 4.25e-01 -0.0573 0.0717 0.504 CD8_Naive L2
ENSG00000134644 PUM1 -612886 sc-eQTL 2.99e-01 -0.06 0.0576 0.504 CD8_Naive L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.17e-01 -0.0359 0.0553 0.504 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 5.83e-01 0.0379 0.0691 0.504 CD8_Naive L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 1.20e-01 0.117 0.0748 0.504 CD8_Naive L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 4.92e-01 0.0621 0.0903 0.516 CD8_TCM L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.57e-01 0.0938 0.0826 0.516 CD8_TCM L2
ENSG00000134644 PUM1 -612886 sc-eQTL 8.21e-01 -0.0177 0.0779 0.516 CD8_TCM L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 1.97e-01 0.105 0.0812 0.516 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 4.63e-01 -0.0555 0.0754 0.516 CD8_TCM L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 9.49e-01 0.00488 0.0763 0.516 CD8_TCM L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 4.26e-01 0.0717 0.0899 0.511 CD8_TEM L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 4.66e-01 -0.063 0.0862 0.511 CD8_TEM L2
ENSG00000134644 PUM1 -612886 sc-eQTL 8.54e-01 0.0163 0.0883 0.511 CD8_TEM L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.82e-01 -0.0124 0.083 0.511 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 3.81e-01 0.0755 0.086 0.511 CD8_TEM L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 3.82e-01 0.0682 0.0778 0.511 CD8_TEM L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.98e-01 -0.0745 0.0879 0.506 MAIT L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.57e-01 -0.11 0.0776 0.506 MAIT L2
ENSG00000134644 PUM1 -612886 sc-eQTL 8.29e-01 -0.0162 0.0748 0.506 MAIT L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 6.45e-01 0.0325 0.0705 0.506 MAIT L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 7.36e-01 -0.0265 0.0785 0.506 MAIT L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 5.98e-01 0.0427 0.0809 0.506 MAIT L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 8.43e-01 0.0177 0.0892 0.513 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 7.16e-01 -0.0275 0.0753 0.513 NK_CD56bright L2
ENSG00000134644 PUM1 -612886 sc-eQTL 4.90e-01 -0.0547 0.0791 0.513 NK_CD56bright L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.80e-01 0.0118 0.0781 0.513 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 5.05e-01 -0.0523 0.0784 0.513 NK_CD56bright L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 8.23e-01 0.0173 0.0773 0.513 NK_CD56bright L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.29e-01 0.0822 0.084 0.504 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 8.72e-01 0.01 0.0623 0.504 NK_CD56dim L2
ENSG00000134644 PUM1 -612886 sc-eQTL 2.09e-01 -0.0802 0.0636 0.504 NK_CD56dim L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 3.86e-01 0.059 0.068 0.504 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 8.93e-01 -0.0115 0.0853 0.504 NK_CD56dim L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 7.41e-01 -0.0233 0.0704 0.504 NK_CD56dim L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 9.84e-01 -0.00181 0.0886 0.507 NK_HLA L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 3.75e-01 0.0701 0.0789 0.507 NK_HLA L2
ENSG00000134644 PUM1 -612886 sc-eQTL 7.92e-01 0.0204 0.0771 0.507 NK_HLA L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 1.22e-01 0.114 0.0731 0.507 NK_HLA L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 5.88e-01 -0.0425 0.0782 0.507 NK_HLA L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.45e-01 0.0349 0.0756 0.507 NK_HLA L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.16e-01 -0.03 0.0823 0.504 NK_cytokine L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.41e-01 -0.0945 0.0639 0.504 NK_cytokine L2
ENSG00000134644 PUM1 -612886 sc-eQTL 7.82e-02 -0.122 0.069 0.504 NK_cytokine L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 2.05e-01 0.0969 0.0762 0.504 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 7.58e-01 -0.025 0.0811 0.504 NK_cytokine L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 9.39e-01 0.00578 0.0754 0.504 NK_cytokine L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 5.72e-01 -0.0547 0.0967 0.481 PB L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 7.53e-01 0.0354 0.112 0.481 PB L2
ENSG00000134644 PUM1 -612886 sc-eQTL 7.23e-01 -0.0347 0.0975 0.481 PB L2
ENSG00000162510 MATN1 -270480 sc-eQTL 1.24e-01 -0.14 0.09 0.481 PB L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 9.82e-01 0.00149 0.065 0.481 PB L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 2.35e-01 -0.106 0.0884 0.481 PB L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 9.14e-01 -0.0103 0.0946 0.481 PB L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 6.89e-01 0.0264 0.0657 0.511 Pro_T L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 6.37e-01 0.0395 0.0834 0.511 Pro_T L2
ENSG00000134644 PUM1 -612886 sc-eQTL 7.09e-02 0.14 0.0772 0.511 Pro_T L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.92e-01 0.03 0.0558 0.511 Pro_T L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 1.97e-01 0.101 0.0777 0.511 Pro_T L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 2.83e-01 0.0771 0.0716 0.511 Pro_T L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 2.00e-01 0.109 0.085 0.504 Treg L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 9.14e-01 0.0089 0.0826 0.504 Treg L2
ENSG00000134644 PUM1 -612886 sc-eQTL 3.63e-01 0.0601 0.066 0.504 Treg L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.59e-01 0.0135 0.0757 0.504 Treg L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 7.99e-01 -0.0197 0.0771 0.504 Treg L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 5.13e-01 0.0504 0.0769 0.504 Treg L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 8.77e-01 -0.0131 0.0845 0.502 cDC L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.00e-01 -0.15 0.0908 0.502 cDC L2
ENSG00000134644 PUM1 -612886 sc-eQTL 7.20e-01 -0.0282 0.0786 0.502 cDC L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.27e-01 0.0349 0.055 0.502 cDC L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 9.97e-01 -0.000258 0.0707 0.502 cDC L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 4.29e-01 -0.0592 0.0747 0.502 cDC L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 5.83e-01 -0.0386 0.0702 0.504 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 6.89e-02 -0.142 0.0777 0.504 cMono_IL1B L2
ENSG00000134644 PUM1 -612886 sc-eQTL 9.82e-01 0.00121 0.053 0.504 cMono_IL1B L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.11e-01 0.0306 0.0465 0.504 cMono_IL1B L2
ENSG00000162512 SDC3 -455653 sc-eQTL 5.45e-01 0.053 0.0876 0.504 cMono_IL1B L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 2.98e-02 0.192 0.0877 0.504 cMono_IL1B L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 4.89e-01 -0.0507 0.0731 0.504 cMono_IL1B L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.44e-01 -0.0699 0.0737 0.504 cMono_S100A L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.82e-01 -0.0939 0.087 0.504 cMono_S100A L2
ENSG00000134644 PUM1 -612886 sc-eQTL 4.54e-01 -0.0473 0.063 0.504 cMono_S100A L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.03e-01 -0.0325 0.0484 0.504 cMono_S100A L2
ENSG00000162512 SDC3 -455653 sc-eQTL 3.80e-01 -0.0735 0.0836 0.504 cMono_S100A L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 5.53e-01 0.0526 0.0886 0.504 cMono_S100A L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 1.85e-01 -0.0956 0.072 0.504 cMono_S100A L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 2.15e-01 0.135 0.108 0.53 gdT L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 8.59e-01 0.0166 0.0933 0.53 gdT L2
ENSG00000134644 PUM1 -612886 sc-eQTL 2.12e-01 -0.12 0.0957 0.53 gdT L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 6.81e-01 -0.0431 0.105 0.53 gdT L2
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 2.57e-01 0.109 0.096 0.53 gdT L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 8.23e-01 0.021 0.0935 0.53 gdT L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 4.76e-01 0.0566 0.0793 0.509 intMono L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 9.15e-01 0.0091 0.0854 0.509 intMono L2
ENSG00000134644 PUM1 -612886 sc-eQTL 5.87e-01 0.0394 0.0724 0.509 intMono L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 9.20e-01 0.00572 0.0568 0.509 intMono L2
ENSG00000162512 SDC3 -455653 sc-eQTL 3.03e-01 0.0802 0.0776 0.509 intMono L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 3.74e-01 0.0725 0.0813 0.509 intMono L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 1.89e-01 -0.101 0.0769 0.509 intMono L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 7.71e-01 0.0219 0.0752 0.505 ncMono L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.72e-01 0.0881 0.08 0.505 ncMono L2
ENSG00000134644 PUM1 -612886 sc-eQTL 4.44e-01 -0.0502 0.0655 0.505 ncMono L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.03e-01 0.0399 0.0595 0.505 ncMono L2
ENSG00000162512 SDC3 -455653 sc-eQTL 3.77e-01 0.059 0.0666 0.505 ncMono L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 3.10e-01 -0.0739 0.0727 0.505 ncMono L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.11e-01 0.0384 0.0754 0.505 ncMono L2
ENSG00000060688 SNRNP40 -843683 sc-eQTL 8.07e-01 0.0211 0.0863 0.514 pDC L2
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 1.10e-01 -0.151 0.0939 0.514 pDC L2
ENSG00000134644 PUM1 -612886 sc-eQTL 1.10e-01 -0.125 0.0779 0.514 pDC L2
ENSG00000162511 LAPTM5 -304669 sc-eQTL 6.28e-01 -0.0355 0.0729 0.514 pDC L2
ENSG00000168528 SERINC2 -956460 sc-eQTL 8.49e-01 0.0169 0.0885 0.514 pDC L2
ENSG00000287510 AL137857.1 -278588 sc-eQTL 2.19e-01 0.0993 0.0805 0.514 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.73e-01 -0.0756 0.0847 0.504 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 2.09e-01 -0.0887 0.0703 0.504 B_Memory LOneK1K
ENSG00000134644 PUM1 -612886 sc-eQTL 9.16e-01 -0.00658 0.0626 0.504 B_Memory LOneK1K
ENSG00000162510 MATN1 -270480 sc-eQTL 2.37e-01 0.0844 0.0711 0.504 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -304669 sc-eQTL 5.35e-01 -0.0278 0.0448 0.504 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 8.96e-01 0.00774 0.0593 0.504 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -278588 sc-eQTL 5.79e-02 -0.122 0.0641 0.504 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -843683 sc-eQTL 6.37e-01 -0.0371 0.0785 0.504 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 6.46e-01 -0.0285 0.0621 0.504 B_Naive LOneK1K
ENSG00000134644 PUM1 -612886 sc-eQTL 1.35e-01 -0.0878 0.0585 0.504 B_Naive LOneK1K
ENSG00000162510 MATN1 -270480 sc-eQTL 4.35e-01 0.0442 0.0565 0.504 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -304669 sc-eQTL 2.95e-01 0.0417 0.0397 0.504 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 6.23e-02 0.0956 0.051 0.504 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -278588 sc-eQTL 7.23e-01 -0.0217 0.0611 0.504 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -843683 sc-eQTL 3.71e-01 -0.0599 0.0668 0.504 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 3.52e-02 -0.159 0.075 0.504 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -612886 sc-eQTL 6.59e-01 -0.0214 0.0483 0.504 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -304669 sc-eQTL 8.97e-01 -0.0055 0.0425 0.504 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -455653 sc-eQTL 8.82e-01 -0.0129 0.0867 0.504 CD14_Mono LOneK1K
ENSG00000168528 SERINC2 -956460 sc-eQTL 1.06e-01 0.144 0.0886 0.504 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -278588 sc-eQTL 3.92e-01 -0.0587 0.0683 0.504 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -843683 sc-eQTL 2.09e-01 0.089 0.0706 0.504 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 5.22e-01 0.0497 0.0774 0.504 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -612886 sc-eQTL 3.10e-01 -0.0645 0.0634 0.504 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -304669 sc-eQTL 7.58e-01 0.0157 0.0508 0.504 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -455653 sc-eQTL 1.74e-01 0.101 0.0739 0.504 CD16_Mono LOneK1K
ENSG00000168528 SERINC2 -956460 sc-eQTL 8.85e-01 0.0111 0.0769 0.504 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.66e-01 -0.0316 0.0731 0.504 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -843683 sc-eQTL 5.71e-01 0.0453 0.0798 0.504 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -843877 sc-eQTL 9.01e-01 -0.00681 0.0545 0.504 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -612886 sc-eQTL 1.04e-01 -0.0969 0.0594 0.504 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -304669 sc-eQTL 2.21e-01 0.0816 0.0665 0.504 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -265399 sc-eQTL 4.98e-01 -0.0522 0.0769 0.504 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -278588 sc-eQTL 6.80e-01 0.0275 0.0664 0.504 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000121766 ZCCHC17 -843877 eQTL 3.02e-02 0.0397 0.0183 0.0 0.0 0.478

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina