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Genes within 1Mb (chr1:30400622:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -896166 sc-eQTL 9.68e-01 -0.00357 0.0884 0.718 B L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.99e-01 -0.0908 0.0705 0.718 B L1
ENSG00000134644 PUM1 -665369 sc-eQTL 5.44e-01 0.0361 0.0594 0.718 B L1
ENSG00000162510 MATN1 -322963 sc-eQTL 4.41e-01 0.0482 0.0624 0.718 B L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.21e-01 -0.0314 0.0489 0.718 B L1
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 3.78e-01 -0.0505 0.0572 0.718 B L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.70e-01 -0.0111 0.0678 0.718 B L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.22e-01 0.0479 0.0747 0.718 CD4T L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 4.45e-01 0.0447 0.0584 0.718 CD4T L1
ENSG00000134644 PUM1 -665369 sc-eQTL 1.83e-01 -0.0692 0.0518 0.718 CD4T L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 3.25e-01 0.0568 0.0575 0.718 CD4T L1
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 6.88e-01 0.0207 0.0516 0.718 CD4T L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.09e-01 -0.051 0.0617 0.718 CD4T L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.69e-01 0.137 0.0993 0.718 CD8T L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 8.21e-01 0.015 0.0664 0.718 CD8T L1
ENSG00000134644 PUM1 -665369 sc-eQTL 2.14e-01 -0.0726 0.0582 0.718 CD8T L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 7.24e-01 -0.0201 0.0567 0.718 CD8T L1
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.07e-01 0.00776 0.0665 0.718 CD8T L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 7.87e-01 -0.0226 0.0836 0.718 CD8T L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.76e-01 0.119 0.0877 0.718 DC L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 8.88e-01 -0.0147 0.104 0.718 DC L1
ENSG00000134644 PUM1 -665369 sc-eQTL 3.96e-01 0.0694 0.0816 0.718 DC L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.57e-01 -0.0105 0.0584 0.718 DC L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.64e-01 -0.0676 0.0922 0.718 DC L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.52e-01 -0.0413 0.0692 0.718 Mono L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 5.77e-02 -0.162 0.0851 0.718 Mono L1
ENSG00000134644 PUM1 -665369 sc-eQTL 8.34e-01 -0.0116 0.055 0.718 Mono L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 3.10e-01 -0.0514 0.0505 0.718 Mono L1
ENSG00000162512 SDC3 -508136 sc-eQTL 4.01e-01 0.0818 0.0971 0.718 Mono L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.75e-02 -0.137 0.0798 0.718 Mono L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.01e-01 0.0489 0.0935 0.717 NK L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.48e-01 0.0206 0.0641 0.717 NK L1
ENSG00000134644 PUM1 -665369 sc-eQTL 4.54e-01 -0.0503 0.0671 0.717 NK L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.38e-02 -0.189 0.0762 0.717 NK L1
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 1.93e-01 0.113 0.0866 0.717 NK L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 5.37e-01 -0.0496 0.0802 0.717 NK L1
ENSG00000060688 SNRNP40 -896166 sc-eQTL 3.93e-01 0.0606 0.0708 0.718 Other_T L1
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.71e-01 -0.0221 0.0758 0.718 Other_T L1
ENSG00000134644 PUM1 -665369 sc-eQTL 8.15e-01 -0.016 0.0682 0.718 Other_T L1
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.05e-01 -0.0373 0.0558 0.718 Other_T L1
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.72e-02 0.151 0.0909 0.718 Other_T L1
ENSG00000287510 AL137857.1 -331071 sc-eQTL 7.52e-01 -0.0302 0.0953 0.718 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -896166 sc-eQTL 3.24e-01 0.115 0.116 0.732 B_Activated L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 6.71e-01 0.0498 0.117 0.732 B_Activated L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.50e-01 0.0207 0.109 0.732 B_Activated L2
ENSG00000162510 MATN1 -322963 sc-eQTL 7.48e-01 -0.0306 0.0952 0.732 B_Activated L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.51e-01 -0.0953 0.066 0.732 B_Activated L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 8.33e-01 -0.0227 0.107 0.732 B_Activated L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 2.49e-02 0.211 0.0935 0.732 B_Activated L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 3.44e-01 0.102 0.108 0.717 B_Intermediate L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 2.80e-01 -0.0971 0.0897 0.717 B_Intermediate L2
ENSG00000134644 PUM1 -665369 sc-eQTL 3.24e-01 0.0837 0.0846 0.717 B_Intermediate L2
ENSG00000162510 MATN1 -322963 sc-eQTL 1.66e-01 0.122 0.0879 0.717 B_Intermediate L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 9.55e-01 0.00308 0.0542 0.717 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.00e-01 0.00957 0.076 0.717 B_Intermediate L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.73e-01 -0.0136 0.0851 0.717 B_Intermediate L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 3.09e-01 -0.106 0.104 0.718 B_Memory L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.03e-01 -0.0365 0.0956 0.718 B_Memory L2
ENSG00000134644 PUM1 -665369 sc-eQTL 9.92e-01 -0.000888 0.0833 0.718 B_Memory L2
ENSG00000162510 MATN1 -322963 sc-eQTL 5.41e-01 0.0487 0.0796 0.718 B_Memory L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 4.13e-01 0.0578 0.0705 0.718 B_Memory L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 5.37e-01 -0.05 0.0807 0.718 B_Memory L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.35e-01 0.00777 0.0946 0.718 B_Memory L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.30e-01 -0.0463 0.0961 0.718 B_Naive1 L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.22e-01 -0.128 0.0826 0.718 B_Naive1 L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.35e-01 0.0153 0.0733 0.718 B_Naive1 L2
ENSG00000162510 MATN1 -322963 sc-eQTL 3.77e-01 0.0656 0.0742 0.718 B_Naive1 L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 3.60e-01 -0.0454 0.0496 0.718 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.76e-01 0.00196 0.0652 0.718 B_Naive1 L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.47e-01 -0.0156 0.0805 0.718 B_Naive1 L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 7.66e-01 0.0305 0.102 0.717 B_Naive2 L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 4.16e-01 0.0687 0.0844 0.717 B_Naive2 L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.48e-01 -0.0158 0.0827 0.717 B_Naive2 L2
ENSG00000162510 MATN1 -322963 sc-eQTL 6.82e-01 -0.0326 0.0794 0.717 B_Naive2 L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 7.48e-01 -0.0174 0.0539 0.717 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 6.57e-01 -0.0349 0.0785 0.717 B_Naive2 L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.73e-01 0.0136 0.0849 0.717 B_Naive2 L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 8.36e-01 0.0209 0.101 0.716 CD4_CTL L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 8.15e-01 -0.0234 0.0995 0.716 CD4_CTL L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.35e-01 -0.0463 0.0975 0.716 CD4_CTL L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 9.00e-01 0.0109 0.087 0.716 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.49e-02 -0.158 0.0944 0.716 CD4_CTL L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 7.02e-01 0.0322 0.0839 0.716 CD4_CTL L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.05e-01 0.0405 0.0781 0.718 CD4_Naive L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.80e-01 0.0927 0.069 0.718 CD4_Naive L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.26e-01 -0.027 0.0553 0.718 CD4_Naive L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.02e-01 0.0968 0.0589 0.718 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.12e-01 0.075 0.0599 0.718 CD4_Naive L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.36e-01 -0.0539 0.069 0.718 CD4_Naive L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.75e-01 0.0556 0.0989 0.718 CD4_TCM L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.83e-01 -0.022 0.0797 0.718 CD4_TCM L2
ENSG00000134644 PUM1 -665369 sc-eQTL 5.47e-01 -0.0426 0.0705 0.718 CD4_TCM L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.37e-01 -0.0121 0.0586 0.718 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.63e-01 -0.0832 0.0741 0.718 CD4_TCM L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 6.93e-01 -0.0327 0.0828 0.718 CD4_TCM L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.81e-01 -0.132 0.0986 0.718 CD4_TEM L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 8.43e-02 -0.162 0.0937 0.718 CD4_TEM L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.10e-02 -0.147 0.0779 0.718 CD4_TEM L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 7.14e-01 -0.0292 0.0795 0.718 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 6.69e-01 0.0398 0.093 0.718 CD4_TEM L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.98e-02 0.155 0.091 0.718 CD4_TEM L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 8.60e-02 0.185 0.107 0.718 CD8_CTL L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 2.85e-01 -0.0883 0.0825 0.718 CD8_CTL L2
ENSG00000134644 PUM1 -665369 sc-eQTL 9.28e-02 -0.135 0.0798 0.718 CD8_CTL L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 4.71e-01 -0.0642 0.0888 0.718 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.22e-01 0.114 0.0931 0.718 CD8_CTL L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.91e-01 -0.0121 0.0879 0.718 CD8_CTL L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 3.04e-01 -0.102 0.0987 0.718 CD8_Naive L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.61e-01 0.078 0.0852 0.718 CD8_Naive L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.56e-01 0.0125 0.0687 0.718 CD8_Naive L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.20e-01 -0.015 0.0658 0.718 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.12e-01 0.00913 0.0822 0.718 CD8_Naive L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 6.04e-01 -0.0464 0.0894 0.718 CD8_Naive L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.08e-01 0.179 0.111 0.708 CD8_TCM L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.50e-01 0.147 0.102 0.708 CD8_TCM L2
ENSG00000134644 PUM1 -665369 sc-eQTL 9.58e-01 -0.00509 0.0964 0.708 CD8_TCM L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.23e-01 -0.0226 0.101 0.708 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 6.52e-01 -0.0422 0.0933 0.708 CD8_TCM L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.29e-01 -0.0747 0.0942 0.708 CD8_TCM L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 2.78e-01 0.113 0.104 0.724 CD8_TEM L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 5.63e-01 -0.0579 0.0998 0.724 CD8_TEM L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.69e-01 -0.0168 0.102 0.724 CD8_TEM L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.49e-01 0.0576 0.0959 0.724 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 7.20e-01 0.0357 0.0996 0.724 CD8_TEM L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 5.83e-01 0.0495 0.0901 0.724 CD8_TEM L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.10e-01 0.166 0.103 0.719 MAIT L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 8.43e-01 -0.0182 0.092 0.719 MAIT L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.63e-01 0.0385 0.0881 0.719 MAIT L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 3.17e-01 -0.0832 0.083 0.719 MAIT L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.79e-01 0.1 0.0924 0.719 MAIT L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.21e-01 -0.0216 0.0954 0.719 MAIT L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.31e-01 0.161 0.106 0.709 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 9.61e-01 -0.0044 0.0903 0.709 NK_CD56bright L2
ENSG00000134644 PUM1 -665369 sc-eQTL 2.84e-01 -0.101 0.0945 0.709 NK_CD56bright L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.06e-01 -0.151 0.0929 0.709 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 6.88e-01 0.0377 0.0939 0.709 NK_CD56bright L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.49e-01 -0.00598 0.0926 0.709 NK_CD56bright L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.05e-01 -0.051 0.0984 0.716 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 9.24e-01 -0.00698 0.0728 0.716 NK_CD56dim L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.97e-01 -0.00969 0.0747 0.716 NK_CD56dim L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.39e-02 -0.179 0.0787 0.716 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 9.47e-01 0.00668 0.0998 0.716 NK_CD56dim L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.24e-01 0.0658 0.0822 0.716 NK_CD56dim L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.17e-01 0.0527 0.105 0.717 NK_HLA L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 6.22e-01 0.0464 0.094 0.717 NK_HLA L2
ENSG00000134644 PUM1 -665369 sc-eQTL 2.39e-01 -0.108 0.0914 0.717 NK_HLA L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.09e-02 -0.221 0.0861 0.717 NK_HLA L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 7.46e-01 -0.0302 0.0931 0.717 NK_HLA L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 3.34e-01 -0.0871 0.0898 0.717 NK_HLA L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 1.21e-01 0.149 0.0957 0.716 NK_cytokine L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 5.83e-01 0.0413 0.0751 0.716 NK_cytokine L2
ENSG00000134644 PUM1 -665369 sc-eQTL 7.55e-01 -0.0254 0.0812 0.716 NK_cytokine L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.33e-02 -0.202 0.0884 0.716 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 3.46e-01 0.0894 0.0946 0.716 NK_cytokine L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.39e-01 0.00677 0.0882 0.716 NK_cytokine L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 4.70e-01 0.0887 0.122 0.73 PB L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.93e-01 -0.121 0.142 0.73 PB L2
ENSG00000134644 PUM1 -665369 sc-eQTL 3.62e-01 0.112 0.123 0.73 PB L2
ENSG00000162510 MATN1 -322963 sc-eQTL 2.71e-01 0.127 0.114 0.73 PB L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 3.07e-01 0.084 0.0818 0.73 PB L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 5.69e-01 0.0641 0.112 0.73 PB L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 7.48e-01 -0.0385 0.12 0.73 PB L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 8.67e-01 -0.013 0.0774 0.72 Pro_T L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 2.19e-01 -0.121 0.0978 0.72 Pro_T L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.43e-01 0.0181 0.0916 0.72 Pro_T L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.88e-01 -0.0698 0.0655 0.72 Pro_T L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.92e-01 0.0968 0.0916 0.72 Pro_T L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.77e-01 0.00246 0.0845 0.72 Pro_T L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 8.89e-01 0.0143 0.102 0.718 Treg L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.47e-01 0.0928 0.0985 0.718 Treg L2
ENSG00000134644 PUM1 -665369 sc-eQTL 8.31e-01 0.0169 0.079 0.718 Treg L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.46e-01 -0.0176 0.0904 0.718 Treg L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 8.37e-01 -0.019 0.0921 0.718 Treg L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.00e-01 -0.0775 0.0919 0.718 Treg L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 2.79e-01 0.112 0.103 0.712 cDC L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.32e-01 0.0382 0.112 0.712 cDC L2
ENSG00000134644 PUM1 -665369 sc-eQTL 5.74e-01 0.054 0.0958 0.712 cDC L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.37e-01 -0.0415 0.0671 0.712 cDC L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 6.55e-01 0.0409 0.0912 0.712 cDC L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 4.88e-01 -0.058 0.0836 0.718 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.49e-01 0.0299 0.0933 0.718 cMono_IL1B L2
ENSG00000134644 PUM1 -665369 sc-eQTL 4.94e-01 0.0432 0.0631 0.718 cMono_IL1B L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 9.82e-01 -0.00123 0.0555 0.718 cMono_IL1B L2
ENSG00000162512 SDC3 -508136 sc-eQTL 4.21e-01 0.0841 0.104 0.718 cMono_IL1B L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 2.48e-01 -0.101 0.0869 0.718 cMono_IL1B L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.35e-01 -0.0548 0.0881 0.718 cMono_S100A L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.42e-03 -0.302 0.102 0.718 cMono_S100A L2
ENSG00000134644 PUM1 -665369 sc-eQTL 7.66e-01 -0.0225 0.0753 0.718 cMono_S100A L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.74e-01 -0.0633 0.0577 0.718 cMono_S100A L2
ENSG00000162512 SDC3 -508136 sc-eQTL 2.21e-01 0.122 0.0997 0.718 cMono_S100A L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 4.50e-01 -0.0653 0.0863 0.718 cMono_S100A L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 9.90e-01 -0.00155 0.123 0.709 gdT L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 4.00e-01 -0.0888 0.105 0.709 gdT L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.85e-01 -0.0442 0.109 0.709 gdT L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.95e-02 -0.222 0.117 0.709 gdT L2
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 1.25e-02 0.27 0.107 0.709 gdT L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.33e-01 -0.00888 0.106 0.709 gdT L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.85e-01 -0.0527 0.0964 0.713 intMono L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.60e-01 -0.146 0.103 0.713 intMono L2
ENSG00000134644 PUM1 -665369 sc-eQTL 5.41e-01 -0.0539 0.0879 0.713 intMono L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.26e-01 -0.105 0.0686 0.713 intMono L2
ENSG00000162512 SDC3 -508136 sc-eQTL 7.71e-01 -0.0276 0.0945 0.713 intMono L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 2.00e-01 -0.12 0.0934 0.713 intMono L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 5.00e-01 0.0606 0.0896 0.724 ncMono L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 6.86e-01 -0.0387 0.0956 0.724 ncMono L2
ENSG00000134644 PUM1 -665369 sc-eQTL 6.34e-01 0.0372 0.0781 0.724 ncMono L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.60e-01 -0.08 0.0708 0.724 ncMono L2
ENSG00000162512 SDC3 -508136 sc-eQTL 2.95e-01 0.0834 0.0794 0.724 ncMono L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.00e-01 -0.0113 0.09 0.724 ncMono L2
ENSG00000060688 SNRNP40 -896166 sc-eQTL 2.60e-01 0.116 0.103 0.706 pDC L2
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 4.50e-01 0.0856 0.113 0.706 pDC L2
ENSG00000134644 PUM1 -665369 sc-eQTL 3.88e-01 0.0811 0.0937 0.706 pDC L2
ENSG00000162511 LAPTM5 -357152 sc-eQTL 6.50e-01 -0.0396 0.0873 0.706 pDC L2
ENSG00000287510 AL137857.1 -331071 sc-eQTL 6.97e-01 -0.0377 0.0967 0.706 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -896166 sc-eQTL 7.25e-01 0.0364 0.103 0.718 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.72e-01 -0.0767 0.0858 0.718 B_Memory LOneK1K
ENSG00000134644 PUM1 -665369 sc-eQTL 8.39e-01 0.0155 0.0762 0.718 B_Memory LOneK1K
ENSG00000162510 MATN1 -322963 sc-eQTL 5.46e-01 0.0525 0.0868 0.718 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -357152 sc-eQTL 4.21e-01 0.0439 0.0545 0.718 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 8.51e-01 -0.0135 0.0722 0.718 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -331071 sc-eQTL 5.84e-01 0.0431 0.0786 0.718 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -896166 sc-eQTL 7.16e-01 -0.0343 0.0944 0.718 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 4.61e-01 -0.0551 0.0746 0.718 B_Naive LOneK1K
ENSG00000134644 PUM1 -665369 sc-eQTL 5.72e-01 0.0399 0.0706 0.718 B_Naive LOneK1K
ENSG00000162510 MATN1 -322963 sc-eQTL 5.37e-01 0.042 0.068 0.718 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -357152 sc-eQTL 2.88e-01 -0.0509 0.0478 0.718 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 4.51e-01 -0.0466 0.0618 0.718 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -331071 sc-eQTL 8.86e-01 -0.0105 0.0735 0.718 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.42e-01 -0.0369 0.0794 0.718 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 1.19e-01 -0.14 0.0895 0.718 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -665369 sc-eQTL 8.58e-01 0.0103 0.0574 0.718 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -357152 sc-eQTL 8.38e-01 -0.0103 0.0504 0.718 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -508136 sc-eQTL 2.77e-01 0.112 0.103 0.718 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -331071 sc-eQTL 1.56e-01 -0.115 0.0809 0.718 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -896166 sc-eQTL 8.69e-01 0.0143 0.0861 0.718 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 3.29e-01 -0.092 0.094 0.718 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -665369 sc-eQTL 5.22e-01 -0.0495 0.0771 0.718 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -357152 sc-eQTL 1.50e-01 -0.0887 0.0614 0.718 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -508136 sc-eQTL 9.67e-01 0.00371 0.0902 0.718 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -331071 sc-eQTL 2.18e-01 -0.109 0.0886 0.718 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -896166 sc-eQTL 6.99e-01 0.0365 0.0942 0.716 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -896360 sc-eQTL 7.13e-01 0.0237 0.0643 0.716 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -665369 sc-eQTL 6.19e-01 -0.0351 0.0705 0.716 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -357152 sc-eQTL 5.41e-03 -0.217 0.0773 0.716 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -317882 sc-eQTL 2.99e-01 0.0944 0.0906 0.716 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -331071 sc-eQTL 9.83e-01 -0.00166 0.0784 0.716 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000229447 AC114495.2 -863059 eQTL 0.0148 -0.0918 0.0376 0.00128 0.0 0.277

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina