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Genes within 1Mb (chr1:30316360:G:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980428 sc-eQTL 4.45e-01 -0.0574 0.075 0.549 B L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 2.06e-01 -0.0761 0.0599 0.549 B L1
ENSG00000134644 PUM1 -749631 sc-eQTL 4.56e-01 -0.0376 0.0504 0.549 B L1
ENSG00000162510 MATN1 -407225 sc-eQTL 7.03e-01 0.0203 0.053 0.549 B L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 9.73e-01 0.0014 0.0415 0.549 B L1
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 2.20e-01 0.0596 0.0485 0.549 B L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.49e-01 0.00372 0.0576 0.549 B L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.27e-01 0.0315 0.0647 0.549 CD4T L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 5.37e-01 -0.0312 0.0505 0.549 CD4T L1
ENSG00000134644 PUM1 -749631 sc-eQTL 1.11e-01 -0.0717 0.0447 0.549 CD4T L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.19e-01 0.0776 0.0496 0.549 CD4T L1
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 4.10e-01 0.0368 0.0446 0.549 CD4T L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 4.49e-01 0.0405 0.0534 0.549 CD4T L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.57e-01 -0.121 0.0851 0.549 CD8T L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 1.00e+00 9.76e-06 0.0569 0.549 CD8T L1
ENSG00000134644 PUM1 -749631 sc-eQTL 4.70e-01 0.0362 0.05 0.549 CD8T L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.23e-01 0.039 0.0486 0.549 CD8T L1
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.51e-01 0.0341 0.057 0.549 CD8T L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.70e-01 0.0407 0.0716 0.549 CD8T L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.10e-01 0.125 0.0778 0.552 DC L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.99e-01 0.0359 0.0927 0.552 DC L1
ENSG00000134644 PUM1 -749631 sc-eQTL 8.80e-02 -0.124 0.0721 0.552 DC L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.18e-01 -0.0519 0.0518 0.552 DC L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.06e-02 0.16 0.0813 0.552 DC L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.16e-01 -0.0299 0.0594 0.549 Mono L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.11e-02 -0.138 0.0731 0.549 Mono L1
ENSG00000134644 PUM1 -749631 sc-eQTL 3.54e-01 -0.0438 0.0471 0.549 Mono L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.24e-01 -0.0429 0.0434 0.549 Mono L1
ENSG00000162512 SDC3 -592398 sc-eQTL 9.61e-01 0.00408 0.0835 0.549 Mono L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.90e-01 -0.000866 0.069 0.549 Mono L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.73e-01 0.112 0.0822 0.547 NK L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.06e-01 -0.0292 0.0565 0.547 NK L1
ENSG00000134644 PUM1 -749631 sc-eQTL 2.14e-01 -0.0735 0.0591 0.547 NK L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 7.13e-01 -0.0251 0.0682 0.547 NK L1
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 7.22e-01 -0.0273 0.0766 0.547 NK L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 2.88e-01 0.0752 0.0706 0.547 NK L1
ENSG00000060688 SNRNP40 -980428 sc-eQTL 8.19e-01 -0.0143 0.0626 0.549 Other_T L1
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 7.00e-01 0.0258 0.0669 0.549 Other_T L1
ENSG00000134644 PUM1 -749631 sc-eQTL 6.30e-02 -0.112 0.0597 0.549 Other_T L1
ENSG00000162511 LAPTM5 -441414 sc-eQTL 9.53e-01 0.00293 0.0493 0.549 Other_T L1
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.71e-01 0.0458 0.0807 0.549 Other_T L1
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.04e-01 0.0102 0.0841 0.549 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980428 sc-eQTL 4.21e-01 -0.0773 0.0958 0.548 B_Activated L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 5.24e-01 -0.0618 0.0967 0.548 B_Activated L2
ENSG00000134644 PUM1 -749631 sc-eQTL 4.53e-01 -0.0675 0.0899 0.548 B_Activated L2
ENSG00000162510 MATN1 -407225 sc-eQTL 9.41e-01 0.00584 0.0787 0.548 B_Activated L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 6.21e-01 -0.0272 0.0548 0.548 B_Activated L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 7.02e-01 0.0339 0.0885 0.548 B_Activated L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 4.76e-01 -0.0558 0.0782 0.548 B_Activated L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 8.78e-01 -0.0144 0.0932 0.549 B_Intermediate L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.72e-01 0.0125 0.0777 0.549 B_Intermediate L2
ENSG00000134644 PUM1 -749631 sc-eQTL 3.90e-01 0.063 0.0731 0.549 B_Intermediate L2
ENSG00000162510 MATN1 -407225 sc-eQTL 6.76e-01 0.032 0.0762 0.549 B_Intermediate L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 6.86e-01 -0.0189 0.0468 0.549 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 6.84e-01 0.0268 0.0657 0.549 B_Intermediate L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.53e-01 -0.0437 0.0735 0.549 B_Intermediate L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.53e-01 0.0405 0.0898 0.545 B_Memory L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 2.38e-01 -0.0976 0.0825 0.545 B_Memory L2
ENSG00000134644 PUM1 -749631 sc-eQTL 5.72e-01 -0.0407 0.072 0.545 B_Memory L2
ENSG00000162510 MATN1 -407225 sc-eQTL 3.31e-01 0.067 0.0688 0.545 B_Memory L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.94e-01 0.0794 0.0609 0.545 B_Memory L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.45e-01 -0.0424 0.0699 0.545 B_Memory L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.57e-02 0.156 0.0812 0.545 B_Memory L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 5.72e-01 0.0466 0.0823 0.549 B_Naive1 L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 4.11e-01 -0.0585 0.071 0.549 B_Naive1 L2
ENSG00000134644 PUM1 -749631 sc-eQTL 9.62e-01 0.003 0.0627 0.549 B_Naive1 L2
ENSG00000162510 MATN1 -407225 sc-eQTL 5.17e-01 0.0413 0.0636 0.549 B_Naive1 L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.69e-01 0.0382 0.0424 0.549 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.85e-01 0.074 0.0556 0.549 B_Naive1 L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 3.83e-01 -0.0601 0.0688 0.549 B_Naive1 L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.59e-01 -0.0386 0.0873 0.547 B_Naive2 L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.30e-01 -0.0348 0.0721 0.547 B_Naive2 L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.85e-01 -0.0287 0.0706 0.547 B_Naive2 L2
ENSG00000162510 MATN1 -407225 sc-eQTL 4.59e-01 -0.0502 0.0677 0.547 B_Naive2 L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 8.55e-01 0.00842 0.046 0.547 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 7.01e-01 -0.0258 0.067 0.547 B_Naive2 L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.87e-01 -0.00121 0.0724 0.547 B_Naive2 L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 2.06e-01 0.111 0.0873 0.543 CD4_CTL L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.37e-01 0.0178 0.0862 0.543 CD4_CTL L2
ENSG00000134644 PUM1 -749631 sc-eQTL 8.23e-01 0.019 0.0845 0.543 CD4_CTL L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 9.93e-01 -0.000654 0.0754 0.543 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.38e-01 0.122 0.082 0.543 CD4_CTL L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.86e-01 -0.0397 0.0727 0.543 CD4_CTL L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.32e-01 -0.0325 0.0678 0.549 CD4_Naive L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 7.12e-01 -0.0222 0.0602 0.549 CD4_Naive L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.69e-02 -0.0878 0.0477 0.549 CD4_Naive L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.43e-01 0.0752 0.0512 0.549 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 9.96e-01 0.000247 0.0522 0.549 CD4_Naive L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 3.01e-01 -0.0621 0.0599 0.549 CD4_Naive L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 8.18e-01 0.0196 0.0852 0.549 CD4_TCM L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 2.29e-01 -0.0827 0.0685 0.549 CD4_TCM L2
ENSG00000134644 PUM1 -749631 sc-eQTL 9.21e-02 -0.102 0.0604 0.549 CD4_TCM L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.43e-01 0.0387 0.0504 0.549 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 3.46e-02 0.135 0.0633 0.549 CD4_TCM L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 1.32e-01 0.107 0.0709 0.549 CD4_TCM L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 5.23e-01 0.0547 0.0856 0.549 CD4_TEM L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.56e-01 -0.0148 0.0816 0.549 CD4_TEM L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.15e-01 -0.0342 0.068 0.549 CD4_TEM L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 8.04e-01 -0.0171 0.0688 0.549 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.12e-01 -0.0528 0.0804 0.549 CD4_TEM L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 1.74e-02 0.188 0.0782 0.549 CD4_TEM L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 8.68e-01 0.0155 0.0933 0.549 CD8_CTL L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 9.81e-01 -0.00169 0.0716 0.549 CD8_CTL L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.23e-01 -0.0342 0.0695 0.549 CD8_CTL L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 2.08e-01 0.0969 0.0767 0.549 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 7.43e-01 0.0265 0.0809 0.549 CD8_CTL L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 7.98e-01 0.0195 0.0761 0.549 CD8_CTL L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.30e-01 -0.129 0.0845 0.549 CD8_Naive L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.40e-01 -0.0344 0.0733 0.549 CD8_Naive L2
ENSG00000134644 PUM1 -749631 sc-eQTL 7.76e-02 0.104 0.0586 0.549 CD8_Naive L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.99e-01 0.0382 0.0565 0.549 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 8.82e-01 0.0105 0.0706 0.549 CD8_Naive L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 8.15e-01 0.018 0.0768 0.549 CD8_Naive L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 2.22e-01 -0.114 0.093 0.544 CD8_TCM L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.90e-01 0.0342 0.0855 0.544 CD8_TCM L2
ENSG00000134644 PUM1 -749631 sc-eQTL 5.73e-01 -0.0454 0.0804 0.544 CD8_TCM L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 7.87e-01 -0.0228 0.0842 0.544 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 7.56e-01 0.0242 0.0779 0.544 CD8_TCM L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.08e-01 0.0521 0.0787 0.544 CD8_TCM L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 3.56e-01 0.0842 0.091 0.553 CD8_TEM L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 5.85e-01 -0.0477 0.0874 0.553 CD8_TEM L2
ENSG00000134644 PUM1 -749631 sc-eQTL 5.01e-01 0.0603 0.0893 0.553 CD8_TEM L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 8.98e-02 -0.142 0.0834 0.553 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.13e-01 0.138 0.0867 0.553 CD8_TEM L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.14e-01 -0.00851 0.079 0.553 CD8_TEM L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.20e-01 -0.0451 0.0908 0.548 MAIT L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 9.29e-01 0.00721 0.0805 0.548 MAIT L2
ENSG00000134644 PUM1 -749631 sc-eQTL 4.00e-02 -0.158 0.0764 0.548 MAIT L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 5.34e-01 -0.0453 0.0727 0.548 MAIT L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.03e-01 0.0543 0.0809 0.548 MAIT L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 7.26e-01 -0.0293 0.0835 0.548 MAIT L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 7.04e-02 0.168 0.0923 0.547 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 3.95e-01 -0.0668 0.0784 0.547 NK_CD56bright L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.92e-01 -0.0327 0.0825 0.547 NK_CD56bright L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.36e-01 0.121 0.081 0.547 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 4.66e-01 -0.0597 0.0817 0.547 NK_CD56bright L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 3.74e-01 0.0717 0.0804 0.547 NK_CD56bright L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.75e-01 0.0367 0.0874 0.547 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.41e-01 -0.0302 0.0646 0.547 NK_CD56dim L2
ENSG00000134644 PUM1 -749631 sc-eQTL 1.39e-01 -0.0979 0.066 0.547 NK_CD56dim L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.19e-01 -0.0705 0.0706 0.547 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 5.65e-01 0.051 0.0886 0.547 NK_CD56dim L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.38e-01 0.045 0.0731 0.547 NK_CD56dim L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.34e-01 -0.0442 0.0927 0.55 NK_HLA L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 9.35e-01 -0.0068 0.0828 0.55 NK_HLA L2
ENSG00000134644 PUM1 -749631 sc-eQTL 2.13e-01 -0.1 0.0804 0.55 NK_HLA L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.47e-01 0.0586 0.0769 0.55 NK_HLA L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 2.72e-01 0.0899 0.0817 0.55 NK_HLA L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 8.65e-01 0.0135 0.0792 0.55 NK_HLA L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.38e-01 0.126 0.0848 0.547 NK_cytokine L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 2.45e-01 -0.0773 0.0663 0.547 NK_cytokine L2
ENSG00000134644 PUM1 -749631 sc-eQTL 6.93e-01 -0.0284 0.0719 0.547 NK_cytokine L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.12e-01 -0.126 0.0787 0.547 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.40e-01 -0.124 0.0835 0.547 NK_cytokine L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 7.41e-01 0.0258 0.0781 0.547 NK_cytokine L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 8.29e-01 0.0213 0.0987 0.522 PB L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 2.34e-01 -0.136 0.114 0.522 PB L2
ENSG00000134644 PUM1 -749631 sc-eQTL 3.08e-01 -0.101 0.0989 0.522 PB L2
ENSG00000162510 MATN1 -407225 sc-eQTL 3.00e-01 -0.0961 0.0922 0.522 PB L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.34e-03 0.191 0.0637 0.522 PB L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 9.60e-01 0.0046 0.0906 0.522 PB L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 8.57e-01 0.0174 0.0964 0.522 PB L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 5.31e-01 -0.043 0.0685 0.548 Pro_T L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 4.37e-01 -0.0678 0.0869 0.548 Pro_T L2
ENSG00000134644 PUM1 -749631 sc-eQTL 7.34e-01 -0.0276 0.0812 0.548 Pro_T L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 2.93e-01 0.0612 0.0581 0.548 Pro_T L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.86e-01 -0.108 0.0811 0.548 Pro_T L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 2.28e-01 -0.0902 0.0746 0.548 Pro_T L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 9.65e-01 -0.00387 0.0882 0.549 Treg L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.93e-01 -0.0115 0.0853 0.549 Treg L2
ENSG00000134644 PUM1 -749631 sc-eQTL 8.93e-01 -0.00921 0.0683 0.549 Treg L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 8.03e-01 0.0196 0.0782 0.549 Treg L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 9.55e-01 -0.00448 0.0797 0.549 Treg L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 8.67e-02 0.136 0.079 0.549 Treg L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 7.53e-01 0.0288 0.0913 0.559 cDC L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 1.01e-01 0.162 0.0981 0.559 cDC L2
ENSG00000134644 PUM1 -749631 sc-eQTL 9.95e-01 0.000509 0.0849 0.559 cDC L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.12e-01 -0.0602 0.0594 0.559 cDC L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 1.61e-01 0.113 0.0804 0.559 cDC L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.50e-01 -0.103 0.0712 0.549 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.83e-01 -0.0327 0.0798 0.549 cMono_IL1B L2
ENSG00000134644 PUM1 -749631 sc-eQTL 2.21e-01 -0.0661 0.0539 0.549 cMono_IL1B L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 7.27e-01 -0.0166 0.0474 0.549 cMono_IL1B L2
ENSG00000162512 SDC3 -592398 sc-eQTL 3.87e-02 0.184 0.0885 0.549 cMono_IL1B L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.91e-01 0.000834 0.0746 0.549 cMono_IL1B L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 1.21e-01 0.117 0.0754 0.549 cMono_S100A L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 1.94e-02 -0.208 0.0884 0.549 cMono_S100A L2
ENSG00000134644 PUM1 -749631 sc-eQTL 8.32e-01 -0.0138 0.0647 0.549 cMono_S100A L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 9.60e-01 0.00248 0.0497 0.549 cMono_S100A L2
ENSG00000162512 SDC3 -592398 sc-eQTL 1.50e-01 0.123 0.0855 0.549 cMono_S100A L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.52e-01 -0.00445 0.0742 0.549 cMono_S100A L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 2.48e-01 0.128 0.11 0.548 gdT L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 5.99e-01 0.0499 0.0948 0.548 gdT L2
ENSG00000134644 PUM1 -749631 sc-eQTL 5.43e-01 -0.0595 0.0977 0.548 gdT L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 1.71e-01 -0.146 0.106 0.548 gdT L2
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 1.00e-01 0.161 0.0972 0.548 gdT L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 2.52e-01 -0.109 0.0946 0.548 gdT L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 7.76e-01 0.0236 0.0829 0.551 intMono L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.90e-01 -0.0124 0.0891 0.551 intMono L2
ENSG00000134644 PUM1 -749631 sc-eQTL 4.59e-01 -0.0561 0.0755 0.551 intMono L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 9.97e-01 0.000258 0.0593 0.551 intMono L2
ENSG00000162512 SDC3 -592398 sc-eQTL 7.72e-02 -0.143 0.0806 0.551 intMono L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.74e-01 0.00264 0.0806 0.551 intMono L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 5.68e-01 0.0453 0.0793 0.559 ncMono L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.53e-01 0.0381 0.0846 0.559 ncMono L2
ENSG00000134644 PUM1 -749631 sc-eQTL 8.64e-01 -0.0118 0.0692 0.559 ncMono L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 6.00e-01 0.0329 0.0628 0.559 ncMono L2
ENSG00000162512 SDC3 -592398 sc-eQTL 5.01e-02 -0.137 0.0698 0.559 ncMono L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.75e-01 -0.00245 0.0796 0.559 ncMono L2
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.97e-01 0.0367 0.094 0.559 pDC L2
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.48e-01 0.0198 0.103 0.559 pDC L2
ENSG00000134644 PUM1 -749631 sc-eQTL 1.08e-01 -0.137 0.0849 0.559 pDC L2
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.22e-02 -0.161 0.0785 0.559 pDC L2
ENSG00000287510 AL137857.1 -415333 sc-eQTL 1.06e-01 0.142 0.0874 0.559 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980428 sc-eQTL 9.95e-01 0.000534 0.0885 0.549 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 8.99e-01 -0.00939 0.0736 0.549 B_Memory LOneK1K
ENSG00000134644 PUM1 -749631 sc-eQTL 8.99e-01 -0.00828 0.0652 0.549 B_Memory LOneK1K
ENSG00000162510 MATN1 -407225 sc-eQTL 6.06e-01 0.0384 0.0743 0.549 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -441414 sc-eQTL 8.04e-01 -0.0116 0.0467 0.549 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 8.99e-01 0.00783 0.0618 0.549 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -415333 sc-eQTL 2.09e-01 0.0847 0.0671 0.549 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -980428 sc-eQTL 6.75e-01 0.0337 0.0802 0.549 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 4.39e-01 -0.0492 0.0634 0.549 B_Naive LOneK1K
ENSG00000134644 PUM1 -749631 sc-eQTL 6.71e-01 -0.0255 0.06 0.549 B_Naive LOneK1K
ENSG00000162510 MATN1 -407225 sc-eQTL 7.61e-01 0.0176 0.0578 0.549 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.19e-01 0.0406 0.0406 0.549 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 4.70e-01 0.038 0.0525 0.549 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -415333 sc-eQTL 5.30e-01 -0.0393 0.0624 0.549 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -980428 sc-eQTL 4.13e-01 -0.0554 0.0675 0.549 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 3.59e-02 -0.16 0.0757 0.549 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -749631 sc-eQTL 3.65e-01 -0.0442 0.0487 0.549 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -441414 sc-eQTL 3.92e-01 -0.0367 0.0428 0.549 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -592398 sc-eQTL 1.75e-02 0.207 0.0864 0.549 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -415333 sc-eQTL 9.73e-01 0.00237 0.0691 0.549 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -980428 sc-eQTL 4.26e-01 0.0598 0.0751 0.55 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 9.17e-01 -0.00854 0.0823 0.55 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -749631 sc-eQTL 9.00e-01 -0.00845 0.0674 0.55 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.98e-01 -0.0366 0.0539 0.55 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -592398 sc-eQTL 1.60e-02 -0.189 0.0777 0.55 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -415333 sc-eQTL 8.09e-01 0.0188 0.0776 0.55 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -980428 sc-eQTL 2.48e-01 0.0954 0.0824 0.547 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -980622 sc-eQTL 6.20e-01 -0.028 0.0565 0.547 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -749631 sc-eQTL 2.01e-01 -0.0791 0.0616 0.547 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -441414 sc-eQTL 4.43e-01 -0.0531 0.0691 0.547 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -402144 sc-eQTL 8.58e-01 -0.0143 0.0798 0.547 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -415333 sc-eQTL 4.88e-01 0.0478 0.0688 0.547 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 \N -441414 8.7e-07 5.7e-07 1.23e-07 3.87e-07 1.12e-07 2.09e-07 5.54e-07 1.65e-07 5.02e-07 2.43e-07 7.44e-07 3.73e-07 7.93e-07 1.34e-07 2.35e-07 2.89e-07 3.69e-07 4.11e-07 2.42e-07 1.73e-07 2.3e-07 4.11e-07 3.77e-07 1.91e-07 7.94e-07 2.56e-07 3.1e-07 2.63e-07 4.22e-07 5.28e-07 3.32e-07 6.42e-08 5.47e-08 1.64e-07 3.34e-07 1.21e-07 1.07e-07 8.15e-08 6.01e-08 1.56e-08 1.01e-07 5.44e-07 4.12e-08 1.97e-08 1.67e-07 1.33e-08 1.21e-07 1.17e-08 6.06e-08