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Genes within 1Mb (chr1:30316042:G:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980746 sc-eQTL 3.50e-01 -0.0707 0.0755 0.519 B L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 2.20e-01 -0.0742 0.0604 0.519 B L1
ENSG00000134644 PUM1 -749949 sc-eQTL 3.76e-01 -0.045 0.0507 0.519 B L1
ENSG00000162510 MATN1 -407543 sc-eQTL 5.66e-01 0.0307 0.0534 0.519 B L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 9.28e-01 -0.00379 0.0418 0.519 B L1
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 4.18e-01 0.0397 0.049 0.519 B L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.19e-01 0.0133 0.058 0.519 B L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.61e-01 0.0482 0.0652 0.519 CD4T L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.71e-01 -0.0149 0.051 0.519 CD4T L1
ENSG00000134644 PUM1 -749949 sc-eQTL 1.57e-01 -0.0642 0.0452 0.519 CD4T L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 2.81e-01 0.0542 0.0502 0.519 CD4T L1
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.84e-01 0.000909 0.045 0.519 CD4T L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.77e-01 0.00838 0.0539 0.519 CD4T L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 1.72e-01 -0.118 0.0859 0.519 CD8T L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.12e-01 -0.0137 0.0574 0.519 CD8T L1
ENSG00000134644 PUM1 -749949 sc-eQTL 1.70e-01 0.0693 0.0503 0.519 CD8T L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.90e-01 0.0422 0.049 0.519 CD8T L1
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 7.27e-01 0.0201 0.0575 0.519 CD8T L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.58e-01 0.00382 0.0723 0.519 CD8T L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 2.40e-01 0.0926 0.0787 0.52 DC L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.71e-01 -0.0152 0.0935 0.52 DC L1
ENSG00000134644 PUM1 -749949 sc-eQTL 1.18e-01 -0.114 0.0728 0.52 DC L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.08e-01 -0.0433 0.0522 0.52 DC L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 2.90e-02 0.18 0.0817 0.52 DC L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 5.82e-01 -0.0329 0.0598 0.519 Mono L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 1.91e-01 -0.0968 0.0738 0.519 Mono L1
ENSG00000134644 PUM1 -749949 sc-eQTL 7.23e-01 -0.0169 0.0475 0.519 Mono L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 2.35e-01 -0.0519 0.0436 0.519 Mono L1
ENSG00000162512 SDC3 -592716 sc-eQTL 9.45e-01 -0.00582 0.084 0.519 Mono L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.11e-01 0.0166 0.0694 0.519 Mono L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 1.88e-01 0.11 0.083 0.517 NK L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.39e-01 -0.0268 0.057 0.517 NK L1
ENSG00000134644 PUM1 -749949 sc-eQTL 1.90e-01 -0.0783 0.0596 0.517 NK L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 8.30e-01 0.0148 0.0688 0.517 NK L1
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.99e-01 -0.0407 0.0773 0.517 NK L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 2.10e-01 0.0895 0.0712 0.517 NK L1
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.00e-01 0.0244 0.0631 0.519 Other_T L1
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 9.41e-01 -0.005 0.0674 0.519 Other_T L1
ENSG00000134644 PUM1 -749949 sc-eQTL 7.19e-02 -0.109 0.0602 0.519 Other_T L1
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.68e-01 -0.0213 0.0497 0.519 Other_T L1
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 8.61e-01 0.0143 0.0814 0.519 Other_T L1
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.09e-01 0.00975 0.0848 0.519 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980746 sc-eQTL 1.79e-01 -0.13 0.0961 0.513 B_Activated L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 5.86e-01 -0.0531 0.0973 0.513 B_Activated L2
ENSG00000134644 PUM1 -749949 sc-eQTL 4.02e-01 -0.0759 0.0903 0.513 B_Activated L2
ENSG00000162510 MATN1 -407543 sc-eQTL 9.75e-01 -0.00252 0.0791 0.513 B_Activated L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.80e-01 -0.0228 0.0551 0.513 B_Activated L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 7.33e-01 0.0304 0.089 0.513 B_Activated L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.63e-01 -0.0136 0.0788 0.513 B_Activated L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.49e-01 -0.071 0.0937 0.519 B_Intermediate L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.29e-01 -0.0272 0.0781 0.519 B_Intermediate L2
ENSG00000134644 PUM1 -749949 sc-eQTL 5.63e-01 0.0427 0.0737 0.519 B_Intermediate L2
ENSG00000162510 MATN1 -407543 sc-eQTL 4.20e-01 0.0619 0.0766 0.519 B_Intermediate L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 7.03e-01 -0.018 0.0471 0.519 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 6.67e-01 0.0284 0.0661 0.519 B_Intermediate L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.14e-01 -0.0174 0.074 0.519 B_Intermediate L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 6.01e-01 0.0472 0.0902 0.515 B_Memory L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 3.35e-01 -0.0802 0.083 0.515 B_Memory L2
ENSG00000134644 PUM1 -749949 sc-eQTL 6.02e-01 -0.0378 0.0723 0.515 B_Memory L2
ENSG00000162510 MATN1 -407543 sc-eQTL 3.45e-01 0.0654 0.0691 0.515 B_Memory L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.85e-01 0.0534 0.0613 0.515 B_Memory L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.65e-01 0.00305 0.0702 0.515 B_Memory L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 5.84e-02 0.155 0.0816 0.515 B_Memory L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.64e-01 0.061 0.0831 0.519 B_Naive1 L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 3.74e-01 -0.0639 0.0717 0.519 B_Naive1 L2
ENSG00000134644 PUM1 -749949 sc-eQTL 8.37e-01 -0.013 0.0634 0.519 B_Naive1 L2
ENSG00000162510 MATN1 -407543 sc-eQTL 4.84e-01 0.045 0.0643 0.519 B_Naive1 L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.32e-01 0.0338 0.0429 0.519 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.21e-01 0.0362 0.0564 0.519 B_Naive1 L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 5.67e-01 -0.04 0.0697 0.519 B_Naive1 L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 3.20e-01 -0.0872 0.0875 0.517 B_Naive2 L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.17e-01 -0.0362 0.0723 0.517 B_Naive2 L2
ENSG00000134644 PUM1 -749949 sc-eQTL 6.66e-01 -0.0306 0.0708 0.517 B_Naive2 L2
ENSG00000162510 MATN1 -407543 sc-eQTL 6.51e-01 -0.0308 0.068 0.517 B_Naive2 L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 9.92e-01 -0.000471 0.0462 0.517 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.59e-01 -0.0393 0.0672 0.517 B_Naive2 L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 7.34e-01 0.0247 0.0726 0.517 B_Naive2 L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 3.50e-01 0.0831 0.0888 0.511 CD4_CTL L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.69e-01 0.0375 0.0875 0.511 CD4_CTL L2
ENSG00000134644 PUM1 -749949 sc-eQTL 7.30e-01 0.0296 0.0858 0.511 CD4_CTL L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 8.60e-01 -0.0135 0.0765 0.511 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 4.55e-02 0.167 0.0828 0.511 CD4_CTL L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.48e-01 -0.00483 0.0738 0.511 CD4_CTL L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.22e-01 -0.0244 0.0684 0.519 CD4_Naive L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.95e-01 -0.008 0.0607 0.519 CD4_Naive L2
ENSG00000134644 PUM1 -749949 sc-eQTL 1.23e-01 -0.0746 0.0482 0.519 CD4_Naive L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 2.49e-01 0.0598 0.0518 0.519 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 3.82e-01 -0.0461 0.0526 0.519 CD4_Naive L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 1.62e-01 -0.0845 0.0602 0.519 CD4_Naive L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.67e-01 0.0256 0.0863 0.519 CD4_TCM L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 4.74e-01 -0.0498 0.0695 0.519 CD4_TCM L2
ENSG00000134644 PUM1 -749949 sc-eQTL 8.55e-02 -0.106 0.0612 0.519 CD4_TCM L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.24e-01 0.0251 0.0511 0.519 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 1.30e-01 0.0979 0.0645 0.519 CD4_TCM L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 2.18e-01 0.0888 0.072 0.519 CD4_TCM L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.34e-01 0.0676 0.0861 0.519 CD4_TEM L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 9.45e-01 0.00572 0.0822 0.519 CD4_TEM L2
ENSG00000134644 PUM1 -749949 sc-eQTL 4.55e-01 -0.0512 0.0684 0.519 CD4_TEM L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 9.21e-01 -0.00689 0.0692 0.519 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 4.34e-01 -0.0634 0.0809 0.519 CD4_TEM L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 3.29e-02 0.17 0.079 0.519 CD4_TEM L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 9.36e-01 0.00756 0.0936 0.519 CD8_CTL L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.23e-01 -0.0255 0.0718 0.519 CD8_CTL L2
ENSG00000134644 PUM1 -749949 sc-eQTL 8.42e-01 -0.0139 0.0697 0.519 CD8_CTL L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 1.71e-01 0.106 0.0769 0.519 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.56e-01 -0.00443 0.0812 0.519 CD8_CTL L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 7.84e-01 0.0209 0.0763 0.519 CD8_CTL L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.97e-02 -0.145 0.085 0.519 CD8_Naive L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.57e-01 -0.0229 0.0738 0.519 CD8_Naive L2
ENSG00000134644 PUM1 -749949 sc-eQTL 1.18e-02 0.149 0.0585 0.519 CD8_Naive L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.76e-01 0.0406 0.0568 0.519 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.86e-01 -0.00125 0.071 0.519 CD8_Naive L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.76e-01 -0.0121 0.0773 0.519 CD8_Naive L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.15e-02 -0.168 0.0928 0.514 CD8_TCM L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.74e-01 0.0246 0.0858 0.514 CD8_TCM L2
ENSG00000134644 PUM1 -749949 sc-eQTL 8.09e-01 -0.0195 0.0806 0.514 CD8_TCM L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.86e-01 -0.0342 0.0844 0.514 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 8.39e-01 0.0159 0.0781 0.514 CD8_TCM L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 3.25e-01 0.0778 0.0788 0.514 CD8_TCM L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 2.05e-01 0.115 0.0909 0.523 CD8_TEM L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 4.81e-01 -0.0617 0.0874 0.523 CD8_TEM L2
ENSG00000134644 PUM1 -749949 sc-eQTL 4.34e-01 0.0701 0.0893 0.523 CD8_TEM L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 7.12e-02 -0.151 0.0834 0.523 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 1.30e-01 0.132 0.0868 0.523 CD8_TEM L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.26e-01 0.00738 0.079 0.523 CD8_TEM L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.34e-01 -0.0193 0.0919 0.517 MAIT L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.15e-01 -0.041 0.0814 0.517 MAIT L2
ENSG00000134644 PUM1 -749949 sc-eQTL 3.33e-02 -0.165 0.0772 0.517 MAIT L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.27e-01 -0.0585 0.0736 0.517 MAIT L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.41e-01 0.0502 0.082 0.517 MAIT L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.82e-01 -0.0126 0.0845 0.517 MAIT L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.55e-02 0.167 0.0936 0.518 NK_CD56bright L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 1.61e-01 -0.112 0.0793 0.518 NK_CD56bright L2
ENSG00000134644 PUM1 -749949 sc-eQTL 4.36e-01 -0.0653 0.0836 0.518 NK_CD56bright L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.86e-02 0.162 0.0818 0.518 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 3.65e-01 -0.0752 0.0828 0.518 NK_CD56bright L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 2.40e-01 0.096 0.0815 0.518 NK_CD56bright L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.53e-01 0.0165 0.0887 0.517 NK_CD56dim L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.33e-01 -0.0138 0.0656 0.517 NK_CD56dim L2
ENSG00000134644 PUM1 -749949 sc-eQTL 1.89e-01 -0.0883 0.067 0.517 NK_CD56dim L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.69e-01 -0.0307 0.0717 0.517 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 4.64e-01 0.0659 0.0898 0.517 NK_CD56dim L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 5.76e-01 0.0415 0.0741 0.517 NK_CD56dim L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.46e-01 -0.0181 0.0931 0.518 NK_HLA L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.23e-01 -0.0295 0.0831 0.518 NK_HLA L2
ENSG00000134644 PUM1 -749949 sc-eQTL 1.48e-01 -0.117 0.0806 0.518 NK_HLA L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.40e-01 0.0598 0.0772 0.518 NK_HLA L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.05e-01 0.0548 0.0822 0.518 NK_HLA L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 7.77e-01 0.0226 0.0795 0.518 NK_HLA L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 9.86e-02 0.142 0.0853 0.517 NK_cytokine L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 2.58e-01 -0.0758 0.0668 0.517 NK_cytokine L2
ENSG00000134644 PUM1 -749949 sc-eQTL 7.39e-01 -0.0241 0.0724 0.517 NK_cytokine L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.24e-01 -0.0787 0.0796 0.517 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 1.47e-01 -0.123 0.0841 0.517 NK_cytokine L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 4.67e-01 0.0573 0.0786 0.517 NK_cytokine L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.47e-01 0.0193 0.0995 0.504 PB L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 2.41e-01 -0.135 0.115 0.504 PB L2
ENSG00000134644 PUM1 -749949 sc-eQTL 3.33e-01 -0.0971 0.0998 0.504 PB L2
ENSG00000162510 MATN1 -407543 sc-eQTL 2.99e-01 -0.097 0.093 0.504 PB L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.60e-03 0.191 0.0643 0.504 PB L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.07e-01 0.0107 0.0914 0.504 PB L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 6.90e-01 0.0389 0.0972 0.504 PB L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 3.46e-01 -0.0643 0.0681 0.517 Pro_T L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 3.24e-01 -0.0854 0.0864 0.517 Pro_T L2
ENSG00000134644 PUM1 -749949 sc-eQTL 9.92e-01 -0.000856 0.0808 0.517 Pro_T L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 2.32e-01 0.0692 0.0577 0.517 Pro_T L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 1.41e-01 -0.119 0.0805 0.517 Pro_T L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 1.79e-01 -0.0999 0.0742 0.517 Pro_T L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 9.56e-01 0.00488 0.0889 0.519 Treg L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.28e-01 -0.0417 0.086 0.519 Treg L2
ENSG00000134644 PUM1 -749949 sc-eQTL 9.86e-01 -0.00121 0.0688 0.519 Treg L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 5.27e-01 0.0499 0.0788 0.519 Treg L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.74e-01 0.00266 0.0803 0.519 Treg L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 3.63e-02 0.167 0.0794 0.519 Treg L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 8.34e-01 -0.0192 0.0917 0.524 cDC L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 2.67e-01 0.11 0.0989 0.524 cDC L2
ENSG00000134644 PUM1 -749949 sc-eQTL 7.63e-01 0.0258 0.0853 0.524 cDC L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.70e-01 -0.0535 0.0596 0.524 cDC L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.22e-02 0.136 0.0805 0.524 cDC L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 2.84e-01 -0.077 0.0716 0.519 cMono_IL1B L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 9.04e-01 -0.00969 0.0801 0.519 cMono_IL1B L2
ENSG00000134644 PUM1 -749949 sc-eQTL 4.04e-01 -0.0453 0.0541 0.519 cMono_IL1B L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 7.26e-01 -0.0167 0.0475 0.519 cMono_IL1B L2
ENSG00000162512 SDC3 -592716 sc-eQTL 4.16e-02 0.182 0.0887 0.519 cMono_IL1B L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.86e-01 0.00134 0.0748 0.519 cMono_IL1B L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 2.32e-01 0.0902 0.0752 0.519 cMono_S100A L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.28e-02 -0.154 0.0885 0.519 cMono_S100A L2
ENSG00000134644 PUM1 -749949 sc-eQTL 8.80e-01 -0.00978 0.0644 0.519 cMono_S100A L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 6.66e-01 -0.0214 0.0495 0.519 cMono_S100A L2
ENSG00000162512 SDC3 -592716 sc-eQTL 3.01e-01 0.0884 0.0853 0.519 cMono_S100A L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.42e-01 0.00537 0.0739 0.519 cMono_S100A L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 1.97e-01 0.143 0.11 0.515 gdT L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 4.19e-01 0.0767 0.0947 0.515 gdT L2
ENSG00000134644 PUM1 -749949 sc-eQTL 3.76e-01 -0.0866 0.0976 0.515 gdT L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 9.15e-02 -0.179 0.105 0.515 gdT L2
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 3.18e-01 0.098 0.0978 0.515 gdT L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 1.53e-01 -0.136 0.0944 0.515 gdT L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 5.95e-01 -0.0439 0.0826 0.522 intMono L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.59e-01 0.0392 0.0888 0.522 intMono L2
ENSG00000134644 PUM1 -749949 sc-eQTL 7.79e-01 -0.0212 0.0754 0.522 intMono L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 8.49e-01 -0.0112 0.0592 0.522 intMono L2
ENSG00000162512 SDC3 -592716 sc-eQTL 4.63e-02 -0.161 0.0802 0.522 intMono L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 9.76e-01 -0.00244 0.0804 0.522 intMono L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.72e-01 0.0576 0.0799 0.527 ncMono L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 6.39e-01 0.0401 0.0853 0.527 ncMono L2
ENSG00000134644 PUM1 -749949 sc-eQTL 9.75e-01 -0.00215 0.0697 0.527 ncMono L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 5.78e-01 0.0352 0.0633 0.527 ncMono L2
ENSG00000162512 SDC3 -592716 sc-eQTL 4.31e-02 -0.143 0.0703 0.527 ncMono L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 5.39e-01 0.0493 0.0802 0.527 ncMono L2
ENSG00000060688 SNRNP40 -980746 sc-eQTL 9.53e-01 0.00552 0.0935 0.528 pDC L2
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.11e-01 0.0381 0.103 0.528 pDC L2
ENSG00000134644 PUM1 -749949 sc-eQTL 1.52e-01 -0.122 0.0845 0.528 pDC L2
ENSG00000162511 LAPTM5 -441732 sc-eQTL 1.06e-01 -0.127 0.0785 0.528 pDC L2
ENSG00000287510 AL137857.1 -415651 sc-eQTL 1.06e-01 0.141 0.0869 0.528 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000060688 SNRNP40 -980746 sc-eQTL 6.34e-01 -0.0426 0.0893 0.519 B_Memory LOneK1K
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.58e-01 -0.023 0.0744 0.519 B_Memory LOneK1K
ENSG00000134644 PUM1 -749949 sc-eQTL 8.84e-01 -0.00966 0.0659 0.519 B_Memory LOneK1K
ENSG00000162510 MATN1 -407543 sc-eQTL 4.38e-01 0.0583 0.075 0.519 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -441732 sc-eQTL 7.45e-01 -0.0154 0.0472 0.519 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 5.69e-01 0.0356 0.0624 0.519 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -415651 sc-eQTL 1.15e-01 0.107 0.0677 0.519 B_Memory LOneK1K
ENSG00000060688 SNRNP40 -980746 sc-eQTL 7.00e-01 0.0311 0.0806 0.519 B_Naive LOneK1K
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 4.69e-01 -0.0462 0.0637 0.519 B_Naive LOneK1K
ENSG00000134644 PUM1 -749949 sc-eQTL 5.47e-01 -0.0364 0.0603 0.519 B_Naive LOneK1K
ENSG00000162510 MATN1 -407543 sc-eQTL 5.82e-01 0.032 0.0581 0.519 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -441732 sc-eQTL 4.40e-01 0.0316 0.0408 0.519 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 9.20e-01 0.00528 0.0528 0.519 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -415651 sc-eQTL 7.14e-01 -0.023 0.0627 0.519 B_Naive LOneK1K
ENSG00000060688 SNRNP40 -980746 sc-eQTL 4.91e-01 -0.0467 0.0676 0.519 CD14_Mono LOneK1K
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 1.19e-01 -0.119 0.0762 0.519 CD14_Mono LOneK1K
ENSG00000134644 PUM1 -749949 sc-eQTL 5.66e-01 -0.0281 0.0488 0.519 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -441732 sc-eQTL 2.60e-01 -0.0484 0.0428 0.519 CD14_Mono LOneK1K
ENSG00000162512 SDC3 -592716 sc-eQTL 3.25e-02 0.187 0.0867 0.519 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -415651 sc-eQTL 8.72e-01 0.0112 0.0692 0.519 CD14_Mono LOneK1K
ENSG00000060688 SNRNP40 -980746 sc-eQTL 5.68e-01 0.0435 0.076 0.519 CD16_Mono LOneK1K
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 7.57e-01 0.0258 0.0832 0.519 CD16_Mono LOneK1K
ENSG00000134644 PUM1 -749949 sc-eQTL 7.62e-01 0.0207 0.0682 0.519 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -441732 sc-eQTL 3.99e-01 -0.046 0.0544 0.519 CD16_Mono LOneK1K
ENSG00000162512 SDC3 -592716 sc-eQTL 1.27e-02 -0.197 0.0785 0.519 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -415651 sc-eQTL 5.01e-01 0.0529 0.0784 0.519 CD16_Mono LOneK1K
ENSG00000060688 SNRNP40 -980746 sc-eQTL 2.83e-01 0.0896 0.0833 0.517 NK_CD56dim LOneK1K
ENSG00000121766 ZCCHC17 -980940 sc-eQTL 8.21e-01 -0.0129 0.057 0.517 NK_CD56dim LOneK1K
ENSG00000134644 PUM1 -749949 sc-eQTL 2.33e-01 -0.0745 0.0623 0.517 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -441732 sc-eQTL 8.89e-01 -0.0098 0.0698 0.517 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -402462 sc-eQTL 7.79e-01 -0.0227 0.0806 0.517 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -415651 sc-eQTL 4.15e-01 0.0567 0.0694 0.517 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162511 \N -441732 8.7e-07 5.67e-07 1.2e-07 3.66e-07 1.18e-07 2.16e-07 5.49e-07 1.65e-07 5.3e-07 2.72e-07 7.32e-07 4.21e-07 8.16e-07 1.41e-07 2.44e-07 2.89e-07 3.75e-07 4.07e-07 2.51e-07 1.71e-07 2.3e-07 4.14e-07 3.81e-07 1.91e-07 7.94e-07 2.56e-07 3.1e-07 2.63e-07 4.15e-07 5.67e-07 3.1e-07 6.7e-08 5.31e-08 1.77e-07 3.34e-07 1.44e-07 8.35e-08 1.09e-07 6.81e-08 2.74e-08 1.04e-07 5.09e-07 4.3e-08 1.87e-08 1.48e-07 1.35e-08 1.29e-07 1.79e-08 5.96e-08