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Genes within 1Mb (chr1:29858120:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 676220 sc-eQTL 7.73e-01 0.0175 0.0608 0.374 B L1
ENSG00000116353 MECR 627178 sc-eQTL 1.46e-01 -0.105 0.072 0.374 B L1
ENSG00000159023 EPB41 971029 sc-eQTL 1.61e-02 0.137 0.0564 0.374 B L1
ENSG00000162510 MATN1 -865465 sc-eQTL 3.28e-01 -0.0566 0.0577 0.374 B L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.28e-01 0.0443 0.0452 0.374 B L1
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 5.75e-01 0.0298 0.053 0.374 B L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 5.02e-01 -0.0422 0.0628 0.374 B L1
ENSG00000116350 SRSF4 676220 sc-eQTL 2.50e-01 0.0661 0.0574 0.374 CD4T L1
ENSG00000116353 MECR 627178 sc-eQTL 4.98e-01 -0.0543 0.08 0.374 CD4T L1
ENSG00000159023 EPB41 971029 sc-eQTL 3.25e-01 0.0444 0.045 0.374 CD4T L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 9.38e-02 0.0909 0.054 0.374 CD4T L1
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 8.00e-01 -0.0123 0.0486 0.374 CD4T L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.03e-01 0.0145 0.0582 0.374 CD4T L1
ENSG00000116350 SRSF4 676220 sc-eQTL 6.42e-02 0.118 0.0633 0.374 CD8T L1
ENSG00000116353 MECR 627178 sc-eQTL 4.77e-01 0.0608 0.0854 0.374 CD8T L1
ENSG00000159023 EPB41 971029 sc-eQTL 7.62e-01 -0.0158 0.052 0.374 CD8T L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 8.60e-01 0.0094 0.053 0.374 CD8T L1
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.01e-01 -0.0643 0.062 0.374 CD8T L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 2.56e-01 -0.0887 0.0779 0.374 CD8T L1
ENSG00000116350 SRSF4 676220 sc-eQTL 2.38e-01 -0.103 0.0871 0.381 DC L1
ENSG00000116353 MECR 627178 sc-eQTL 1.63e-01 -0.135 0.096 0.381 DC L1
ENSG00000159023 EPB41 971029 sc-eQTL 2.27e-01 -0.104 0.0856 0.381 DC L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 7.35e-02 0.0992 0.0551 0.381 DC L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.45e-01 0.0171 0.0878 0.381 DC L1
ENSG00000116350 SRSF4 676220 sc-eQTL 7.84e-01 -0.0163 0.0594 0.374 Mono L1
ENSG00000116353 MECR 627178 sc-eQTL 5.25e-02 0.169 0.0866 0.374 Mono L1
ENSG00000159023 EPB41 971029 sc-eQTL 6.96e-01 -0.0262 0.0668 0.374 Mono L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 4.06e-01 0.0383 0.0461 0.374 Mono L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.86e-01 -0.0105 0.0733 0.374 Mono L1
ENSG00000116350 SRSF4 676220 sc-eQTL 8.69e-01 0.0111 0.0672 0.376 NK L1
ENSG00000116353 MECR 627178 sc-eQTL 4.24e-01 -0.0708 0.0884 0.376 NK L1
ENSG00000159023 EPB41 971029 sc-eQTL 8.50e-01 0.0114 0.0602 0.376 NK L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.69e-01 0.101 0.0733 0.376 NK L1
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 5.01e-01 0.0556 0.0826 0.376 NK L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.08e-01 0.0632 0.0762 0.376 NK L1
ENSG00000116350 SRSF4 676220 sc-eQTL 5.71e-01 0.0372 0.0655 0.374 Other_T L1
ENSG00000116353 MECR 627178 sc-eQTL 1.66e-01 -0.108 0.0774 0.374 Other_T L1
ENSG00000159023 EPB41 971029 sc-eQTL 4.02e-01 0.0592 0.0704 0.374 Other_T L1
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.41e-01 0.0504 0.0528 0.374 Other_T L1
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 7.75e-01 -0.0247 0.0866 0.374 Other_T L1
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.25e-01 -0.0199 0.0902 0.374 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 676220 sc-eQTL 3.30e-01 -0.109 0.111 0.383 B_Activated L2
ENSG00000116353 MECR 627178 sc-eQTL 8.04e-01 0.0249 0.1 0.383 B_Activated L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.56e-01 -0.0916 0.099 0.383 B_Activated L2
ENSG00000162510 MATN1 -865465 sc-eQTL 1.04e-01 -0.148 0.0905 0.383 B_Activated L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 6.67e-01 0.0274 0.0636 0.383 B_Activated L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.44e-02 0.216 0.101 0.383 B_Activated L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.72e-01 -0.0654 0.0907 0.383 B_Activated L2
ENSG00000116350 SRSF4 676220 sc-eQTL 7.73e-01 -0.0233 0.0808 0.376 B_Intermediate L2
ENSG00000116353 MECR 627178 sc-eQTL 6.86e-01 -0.0382 0.0942 0.376 B_Intermediate L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.05e-01 0.0763 0.0742 0.376 B_Intermediate L2
ENSG00000162510 MATN1 -865465 sc-eQTL 2.96e-01 -0.0867 0.0828 0.376 B_Intermediate L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 6.62e-01 -0.0223 0.0509 0.376 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 9.62e-01 0.00344 0.0715 0.376 B_Intermediate L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.07e-01 -0.0195 0.08 0.376 B_Intermediate L2
ENSG00000116350 SRSF4 676220 sc-eQTL 3.08e-01 -0.0846 0.0828 0.371 B_Memory L2
ENSG00000116353 MECR 627178 sc-eQTL 2.32e-01 0.112 0.0934 0.371 B_Memory L2
ENSG00000159023 EPB41 971029 sc-eQTL 2.79e-02 0.173 0.0783 0.371 B_Memory L2
ENSG00000162510 MATN1 -865465 sc-eQTL 8.29e-02 0.13 0.0747 0.371 B_Memory L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 8.07e-01 0.0163 0.0667 0.371 B_Memory L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 4.31e-01 -0.0601 0.0762 0.371 B_Memory L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 6.09e-02 -0.167 0.0887 0.371 B_Memory L2
ENSG00000116350 SRSF4 676220 sc-eQTL 9.06e-01 -0.00838 0.0711 0.374 B_Naive1 L2
ENSG00000116353 MECR 627178 sc-eQTL 5.00e-01 -0.0631 0.0934 0.374 B_Naive1 L2
ENSG00000159023 EPB41 971029 sc-eQTL 1.64e-01 0.0928 0.0664 0.374 B_Naive1 L2
ENSG00000162510 MATN1 -865465 sc-eQTL 6.48e-01 -0.0317 0.0692 0.374 B_Naive1 L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 4.66e-01 0.0337 0.0462 0.374 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 6.18e-01 0.0303 0.0607 0.374 B_Naive1 L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 3.92e-01 -0.0642 0.0749 0.374 B_Naive1 L2
ENSG00000116350 SRSF4 676220 sc-eQTL 3.92e-01 -0.0683 0.0796 0.371 B_Naive2 L2
ENSG00000116353 MECR 627178 sc-eQTL 8.67e-03 -0.242 0.0915 0.371 B_Naive2 L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.94e-01 0.0697 0.0815 0.371 B_Naive2 L2
ENSG00000162510 MATN1 -865465 sc-eQTL 7.14e-01 -0.027 0.0736 0.371 B_Naive2 L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 8.62e-01 0.0087 0.05 0.371 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 9.31e-01 0.00634 0.0728 0.371 B_Naive2 L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.46e-01 -0.06 0.0785 0.371 B_Naive2 L2
ENSG00000116350 SRSF4 676220 sc-eQTL 9.94e-01 0.000654 0.0893 0.368 CD4_CTL L2
ENSG00000116353 MECR 627178 sc-eQTL 1.66e-01 -0.125 0.09 0.368 CD4_CTL L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.49e-01 0.0842 0.0898 0.368 CD4_CTL L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.71e-01 0.0725 0.081 0.368 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 7.73e-03 -0.235 0.0871 0.368 CD4_CTL L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.07e-02 -0.16 0.0775 0.368 CD4_CTL L2
ENSG00000116350 SRSF4 676220 sc-eQTL 6.52e-01 0.0268 0.0592 0.374 CD4_Naive L2
ENSG00000116353 MECR 627178 sc-eQTL 6.30e-01 -0.041 0.0851 0.374 CD4_Naive L2
ENSG00000159023 EPB41 971029 sc-eQTL 6.81e-01 -0.0186 0.0451 0.374 CD4_Naive L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.75e-01 0.0756 0.0556 0.374 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 8.57e-01 0.0102 0.0567 0.374 CD4_Naive L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 9.47e-01 0.00433 0.0651 0.374 CD4_Naive L2
ENSG00000116350 SRSF4 676220 sc-eQTL 2.72e-01 0.0769 0.0698 0.374 CD4_TCM L2
ENSG00000116353 MECR 627178 sc-eQTL 9.73e-01 -0.00325 0.0943 0.374 CD4_TCM L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.53e-01 0.0492 0.0528 0.374 CD4_TCM L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.63e-01 0.0499 0.0548 0.374 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.43e-01 -0.0661 0.0695 0.374 CD4_TCM L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 3.81e-01 0.068 0.0774 0.374 CD4_TCM L2
ENSG00000116350 SRSF4 676220 sc-eQTL 6.28e-01 0.0421 0.0868 0.374 CD4_TEM L2
ENSG00000116353 MECR 627178 sc-eQTL 8.83e-01 -0.0141 0.0957 0.374 CD4_TEM L2
ENSG00000159023 EPB41 971029 sc-eQTL 2.72e-01 0.0784 0.0712 0.374 CD4_TEM L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.13e-01 0.0754 0.0745 0.374 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 5.49e-01 -0.0524 0.0873 0.374 CD4_TEM L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 6.49e-01 0.0392 0.086 0.374 CD4_TEM L2
ENSG00000116350 SRSF4 676220 sc-eQTL 1.20e-01 0.117 0.075 0.374 CD8_CTL L2
ENSG00000116353 MECR 627178 sc-eQTL 8.32e-01 0.0189 0.0888 0.374 CD8_CTL L2
ENSG00000159023 EPB41 971029 sc-eQTL 9.33e-01 0.00568 0.0676 0.374 CD8_CTL L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 2.07e-01 0.104 0.0818 0.374 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 7.88e-01 -0.0233 0.0863 0.374 CD8_CTL L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 1.93e-01 -0.106 0.0808 0.374 CD8_CTL L2
ENSG00000116350 SRSF4 676220 sc-eQTL 4.84e-01 0.055 0.0785 0.374 CD8_Naive L2
ENSG00000116353 MECR 627178 sc-eQTL 5.39e-01 0.0531 0.0863 0.374 CD8_Naive L2
ENSG00000159023 EPB41 971029 sc-eQTL 5.84e-01 -0.0326 0.0593 0.374 CD8_Naive L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 7.97e-01 -0.0156 0.0607 0.374 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.36e-01 -0.0729 0.0756 0.374 CD8_Naive L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.26e-02 -0.167 0.0817 0.374 CD8_Naive L2
ENSG00000116350 SRSF4 676220 sc-eQTL 5.60e-01 0.0555 0.0951 0.377 CD8_TCM L2
ENSG00000116353 MECR 627178 sc-eQTL 2.52e-01 -0.108 0.0941 0.377 CD8_TCM L2
ENSG00000159023 EPB41 971029 sc-eQTL 1.53e-01 0.102 0.071 0.377 CD8_TCM L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 5.45e-01 0.056 0.0924 0.377 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 9.53e-01 0.00505 0.0856 0.377 CD8_TCM L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 5.64e-01 -0.0499 0.0864 0.377 CD8_TCM L2
ENSG00000116350 SRSF4 676220 sc-eQTL 2.33e-01 -0.108 0.0903 0.361 CD8_TEM L2
ENSG00000116353 MECR 627178 sc-eQTL 2.58e-01 0.108 0.0953 0.361 CD8_TEM L2
ENSG00000159023 EPB41 971029 sc-eQTL 1.34e-01 0.143 0.0949 0.361 CD8_TEM L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 8.86e-01 0.013 0.0906 0.361 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 7.41e-01 0.0311 0.094 0.361 CD8_TEM L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 5.33e-02 -0.164 0.0843 0.361 CD8_TEM L2
ENSG00000116350 SRSF4 676220 sc-eQTL 4.87e-01 0.0616 0.0884 0.372 MAIT L2
ENSG00000116353 MECR 627178 sc-eQTL 9.06e-01 0.0117 0.0993 0.372 MAIT L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.64e-01 0.076 0.0835 0.372 MAIT L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 9.27e-02 0.135 0.0802 0.372 MAIT L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.43e-01 -0.0853 0.0897 0.372 MAIT L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 5.36e-01 -0.0574 0.0926 0.372 MAIT L2
ENSG00000116350 SRSF4 676220 sc-eQTL 5.36e-02 -0.185 0.0952 0.378 NK_CD56bright L2
ENSG00000116353 MECR 627178 sc-eQTL 8.24e-01 -0.0213 0.0954 0.378 NK_CD56bright L2
ENSG00000159023 EPB41 971029 sc-eQTL 7.07e-01 0.0317 0.084 0.378 NK_CD56bright L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.51e-01 0.125 0.0871 0.378 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 3.49e-01 -0.0825 0.0878 0.378 NK_CD56bright L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.65e-02 0.172 0.0859 0.378 NK_CD56bright L2
ENSG00000116350 SRSF4 676220 sc-eQTL 3.44e-01 -0.0654 0.069 0.375 NK_CD56dim L2
ENSG00000116353 MECR 627178 sc-eQTL 6.86e-01 0.0381 0.0941 0.375 NK_CD56dim L2
ENSG00000159023 EPB41 971029 sc-eQTL 4.13e-01 0.0537 0.0655 0.375 NK_CD56dim L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 2.74e-01 0.0833 0.0759 0.375 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 5.48e-01 0.0573 0.0953 0.375 NK_CD56dim L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 7.92e-01 0.0207 0.0787 0.375 NK_CD56dim L2
ENSG00000116350 SRSF4 676220 sc-eQTL 6.74e-01 -0.0381 0.0904 0.381 NK_HLA L2
ENSG00000116353 MECR 627178 sc-eQTL 9.28e-01 -0.00822 0.0908 0.381 NK_HLA L2
ENSG00000159023 EPB41 971029 sc-eQTL 7.84e-01 -0.0234 0.0852 0.381 NK_HLA L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 5.32e-03 0.223 0.0791 0.381 NK_HLA L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 8.91e-01 -0.0117 0.0858 0.381 NK_HLA L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 7.01e-01 -0.0319 0.0829 0.381 NK_HLA L2
ENSG00000116350 SRSF4 676220 sc-eQTL 1.08e-01 0.123 0.0763 0.375 NK_cytokine L2
ENSG00000116353 MECR 627178 sc-eQTL 9.18e-03 -0.246 0.0935 0.375 NK_cytokine L2
ENSG00000159023 EPB41 971029 sc-eQTL 6.54e-01 -0.033 0.0734 0.375 NK_cytokine L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 5.11e-02 0.165 0.0839 0.375 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 9.96e-02 0.147 0.0891 0.375 NK_cytokine L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.40e-01 -0.0645 0.0834 0.375 NK_cytokine L2
ENSG00000116350 SRSF4 676220 sc-eQTL 3.84e-01 0.0956 0.109 0.374 PB L2
ENSG00000116353 MECR 627178 sc-eQTL 9.41e-01 0.00732 0.0989 0.374 PB L2
ENSG00000159023 EPB41 971029 sc-eQTL 5.58e-01 0.0652 0.111 0.374 PB L2
ENSG00000162510 MATN1 -865465 sc-eQTL 6.60e-01 0.044 0.0997 0.374 PB L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 2.20e-01 0.0873 0.0708 0.374 PB L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 2.34e-01 -0.116 0.097 0.374 PB L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 1.80e-01 -0.139 0.103 0.374 PB L2
ENSG00000116350 SRSF4 676220 sc-eQTL 3.54e-01 -0.0713 0.0767 0.376 Pro_T L2
ENSG00000116353 MECR 627178 sc-eQTL 4.80e-02 -0.155 0.0778 0.376 Pro_T L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.32e-01 0.0776 0.0798 0.376 Pro_T L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.91e-01 0.0802 0.0611 0.376 Pro_T L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 6.88e-01 -0.0345 0.0856 0.376 Pro_T L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 3.05e-01 -0.0809 0.0786 0.376 Pro_T L2
ENSG00000116350 SRSF4 676220 sc-eQTL 5.70e-01 0.0465 0.0818 0.374 Treg L2
ENSG00000116353 MECR 627178 sc-eQTL 2.83e-01 0.106 0.0982 0.374 Treg L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.33e-01 0.0665 0.0685 0.374 Treg L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 7.32e-02 0.149 0.0829 0.374 Treg L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 4.79e-01 0.0603 0.085 0.374 Treg L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 1.69e-01 -0.117 0.0846 0.374 Treg L2
ENSG00000116350 SRSF4 676220 sc-eQTL 9.48e-01 0.00598 0.0909 0.385 cDC L2
ENSG00000116353 MECR 627178 sc-eQTL 1.57e-01 -0.144 0.102 0.385 cDC L2
ENSG00000159023 EPB41 971029 sc-eQTL 5.31e-01 -0.0539 0.0859 0.385 cDC L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 6.37e-01 0.0296 0.0626 0.385 cDC L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.02e-01 0.0713 0.0849 0.385 cDC L2
ENSG00000116350 SRSF4 676220 sc-eQTL 8.92e-01 0.00993 0.0728 0.374 cMono_IL1B L2
ENSG00000116353 MECR 627178 sc-eQTL 5.05e-01 0.0601 0.0899 0.374 cMono_IL1B L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.77e-01 -0.0581 0.0657 0.374 cMono_IL1B L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 3.98e-01 0.0423 0.05 0.374 cMono_IL1B L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 9.23e-01 -0.0076 0.0787 0.374 cMono_IL1B L2
ENSG00000116350 SRSF4 676220 sc-eQTL 2.61e-01 -0.0771 0.0685 0.374 cMono_S100A L2
ENSG00000116353 MECR 627178 sc-eQTL 4.96e-01 0.0618 0.0905 0.374 cMono_S100A L2
ENSG00000159023 EPB41 971029 sc-eQTL 6.09e-01 0.0425 0.0831 0.374 cMono_S100A L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 9.02e-01 -0.00641 0.0521 0.374 cMono_S100A L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.91e-01 -0.0536 0.0777 0.374 cMono_S100A L2
ENSG00000116350 SRSF4 676220 sc-eQTL 6.32e-01 -0.0564 0.118 0.367 gdT L2
ENSG00000116353 MECR 627178 sc-eQTL 2.24e-02 -0.266 0.115 0.367 gdT L2
ENSG00000159023 EPB41 971029 sc-eQTL 9.87e-01 0.00173 0.103 0.367 gdT L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.72e-01 0.162 0.118 0.367 gdT L2
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 2.97e-01 0.114 0.109 0.367 gdT L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 4.40e-01 0.0819 0.106 0.367 gdT L2
ENSG00000116350 SRSF4 676220 sc-eQTL 9.79e-01 0.00228 0.0876 0.373 intMono L2
ENSG00000116353 MECR 627178 sc-eQTL 3.78e-01 -0.082 0.0928 0.373 intMono L2
ENSG00000159023 EPB41 971029 sc-eQTL 7.84e-01 0.0249 0.0906 0.373 intMono L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 9.60e-01 0.00322 0.0646 0.373 intMono L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 2.92e-01 0.0924 0.0875 0.373 intMono L2
ENSG00000116350 SRSF4 676220 sc-eQTL 5.06e-01 0.0585 0.0879 0.378 ncMono L2
ENSG00000116353 MECR 627178 sc-eQTL 1.55e-01 0.135 0.0944 0.378 ncMono L2
ENSG00000159023 EPB41 971029 sc-eQTL 1.51e-01 -0.136 0.0946 0.378 ncMono L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 6.36e-01 0.0317 0.0669 0.378 ncMono L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.50e-02 -0.146 0.0842 0.378 ncMono L2
ENSG00000116350 SRSF4 676220 sc-eQTL 1.33e-01 -0.154 0.102 0.387 pDC L2
ENSG00000116353 MECR 627178 sc-eQTL 8.58e-01 -0.019 0.106 0.387 pDC L2
ENSG00000159023 EPB41 971029 sc-eQTL 3.23e-01 -0.0997 0.101 0.387 pDC L2
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.06e-02 0.204 0.0789 0.387 pDC L2
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.79e-01 0.0136 0.0892 0.387 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 676220 sc-eQTL 5.50e-01 -0.0445 0.0744 0.374 B_Memory LOneK1K
ENSG00000116353 MECR 627178 sc-eQTL 6.55e-01 -0.0411 0.0918 0.374 B_Memory LOneK1K
ENSG00000159023 EPB41 971029 sc-eQTL 4.83e-02 0.13 0.0653 0.374 B_Memory LOneK1K
ENSG00000162510 MATN1 -865465 sc-eQTL 1.54e-01 -0.116 0.0809 0.374 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -899654 sc-eQTL 9.41e-01 -0.0038 0.0511 0.374 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 9.03e-01 0.00822 0.0676 0.374 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -873573 sc-eQTL 9.06e-01 -0.0087 0.0737 0.374 B_Memory LOneK1K
ENSG00000116350 SRSF4 676220 sc-eQTL 9.73e-01 0.00226 0.0666 0.374 B_Naive LOneK1K
ENSG00000116353 MECR 627178 sc-eQTL 1.85e-02 -0.203 0.0858 0.374 B_Naive LOneK1K
ENSG00000159023 EPB41 971029 sc-eQTL 2.16e-01 0.0787 0.0635 0.374 B_Naive LOneK1K
ENSG00000162510 MATN1 -865465 sc-eQTL 8.28e-01 -0.0137 0.0628 0.374 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -899654 sc-eQTL 5.77e-01 0.0247 0.0442 0.374 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 8.71e-01 -0.00926 0.0571 0.374 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -873573 sc-eQTL 5.40e-01 -0.0416 0.0678 0.374 B_Naive LOneK1K
ENSG00000116350 SRSF4 676220 sc-eQTL 8.61e-01 -0.0113 0.0646 0.374 CD14_Mono LOneK1K
ENSG00000116353 MECR 627178 sc-eQTL 9.09e-02 0.146 0.0858 0.374 CD14_Mono LOneK1K
ENSG00000159023 EPB41 971029 sc-eQTL 8.92e-01 -0.00871 0.0642 0.374 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -899654 sc-eQTL 4.78e-01 0.0323 0.0455 0.374 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.04e-01 -0.0182 0.0733 0.374 CD14_Mono LOneK1K
ENSG00000116350 SRSF4 676220 sc-eQTL 9.42e-01 -0.00573 0.0784 0.375 CD16_Mono LOneK1K
ENSG00000116353 MECR 627178 sc-eQTL 5.84e-01 0.049 0.0893 0.375 CD16_Mono LOneK1K
ENSG00000159023 EPB41 971029 sc-eQTL 2.70e-01 -0.0999 0.0903 0.375 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -899654 sc-eQTL 4.35e-01 0.0449 0.0574 0.375 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -873573 sc-eQTL 6.51e-01 0.0374 0.0827 0.375 CD16_Mono LOneK1K
ENSG00000116350 SRSF4 676220 sc-eQTL 5.68e-01 0.0376 0.0659 0.375 NK_CD56dim LOneK1K
ENSG00000116353 MECR 627178 sc-eQTL 3.95e-01 -0.0773 0.0907 0.375 NK_CD56dim LOneK1K
ENSG00000159023 EPB41 971029 sc-eQTL 9.45e-01 0.00429 0.0619 0.375 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -899654 sc-eQTL 1.64e-01 0.104 0.0746 0.375 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -860384 sc-eQTL 2.48e-01 0.1 0.0862 0.375 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -873573 sc-eQTL 8.43e-01 0.0148 0.0746 0.375 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 676220 eQTL 0.00534 -0.0302 0.0108 0.00149 0.0 0.393

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000116350 SRSF4 676220 3.1e-07 1.56e-07 6.57e-08 2.2e-07 1.08e-07 8.89e-08 2.16e-07 5.84e-08 1.85e-07 1.03e-07 1.76e-07 1.37e-07 2.29e-07 8.07e-08 5.97e-08 9.48e-08 5.27e-08 2.04e-07 7.29e-08 5.87e-08 1.24e-07 1.7e-07 1.68e-07 3.68e-08 2.17e-07 1.56e-07 1.29e-07 1.26e-07 1.39e-07 1.24e-07 1.21e-07 4.23e-08 4.37e-08 9.3e-08 4.78e-08 3.05e-08 4.28e-08 7.61e-08 6.5e-08 5.56e-08 5.96e-08 1.55e-07 3.99e-08 1.09e-08 3.55e-08 8.31e-09 7.61e-08 2.05e-09 4.67e-08