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Genes within 1Mb (chr1:29846722:T:A):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 664822 sc-eQTL 9.89e-01 -0.000785 0.0561 0.412 B L1
ENSG00000116353 MECR 615780 sc-eQTL 2.67e-01 -0.0742 0.0666 0.412 B L1
ENSG00000159023 EPB41 959631 sc-eQTL 4.77e-02 0.104 0.0522 0.412 B L1
ENSG00000162510 MATN1 -876863 sc-eQTL 1.32e-01 -0.0803 0.0531 0.412 B L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 2.17e-01 0.0516 0.0416 0.412 B L1
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.15e-01 -0.0247 0.0489 0.412 B L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.02e-01 -0.0389 0.0579 0.412 B L1
ENSG00000116350 SRSF4 664822 sc-eQTL 8.27e-01 0.0118 0.054 0.412 CD4T L1
ENSG00000116353 MECR 615780 sc-eQTL 8.24e-01 -0.0167 0.0751 0.412 CD4T L1
ENSG00000159023 EPB41 959631 sc-eQTL 6.23e-01 0.0208 0.0423 0.412 CD4T L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 2.66e-01 0.0567 0.0508 0.412 CD4T L1
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.02e-01 0.00563 0.0456 0.412 CD4T L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.77e-01 0.0388 0.0546 0.412 CD4T L1
ENSG00000116350 SRSF4 664822 sc-eQTL 1.69e-01 0.0814 0.0589 0.412 CD8T L1
ENSG00000116353 MECR 615780 sc-eQTL 6.29e-01 0.0383 0.0793 0.412 CD8T L1
ENSG00000159023 EPB41 959631 sc-eQTL 3.90e-01 -0.0415 0.0482 0.412 CD8T L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 8.18e-01 -0.0114 0.0492 0.412 CD8T L1
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 3.30e-01 -0.0562 0.0576 0.412 CD8T L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.30e-01 -0.0455 0.0724 0.412 CD8T L1
ENSG00000116350 SRSF4 664822 sc-eQTL 3.72e-01 -0.0731 0.0817 0.412 DC L1
ENSG00000116353 MECR 615780 sc-eQTL 2.14e-01 -0.112 0.09 0.412 DC L1
ENSG00000159023 EPB41 959631 sc-eQTL 2.09e-01 -0.101 0.0802 0.412 DC L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 5.47e-02 0.0996 0.0515 0.412 DC L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.72e-01 0.0593 0.0821 0.412 DC L1
ENSG00000116350 SRSF4 664822 sc-eQTL 8.06e-01 0.0141 0.0575 0.412 Mono L1
ENSG00000116353 MECR 615780 sc-eQTL 4.43e-01 0.065 0.0846 0.412 Mono L1
ENSG00000159023 EPB41 959631 sc-eQTL 6.85e-01 -0.0263 0.0648 0.412 Mono L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.83e-01 0.0314 0.0447 0.412 Mono L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.82e-01 -0.05 0.0709 0.412 Mono L1
ENSG00000116350 SRSF4 664822 sc-eQTL 9.04e-01 0.00752 0.0624 0.41 NK L1
ENSG00000116353 MECR 615780 sc-eQTL 9.94e-01 -0.000619 0.0821 0.41 NK L1
ENSG00000159023 EPB41 959631 sc-eQTL 1.50e-01 0.0804 0.0557 0.41 NK L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 9.18e-01 0.00703 0.0683 0.41 NK L1
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 7.96e-01 0.0198 0.0768 0.41 NK L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 1.36e-01 0.106 0.0705 0.41 NK L1
ENSG00000116350 SRSF4 664822 sc-eQTL 9.49e-01 -0.00394 0.0619 0.412 Other_T L1
ENSG00000116353 MECR 615780 sc-eQTL 4.56e-01 -0.0548 0.0734 0.412 Other_T L1
ENSG00000159023 EPB41 959631 sc-eQTL 7.05e-01 0.0253 0.0666 0.412 Other_T L1
ENSG00000162511 LAPTM5 -911052 sc-eQTL 7.11e-01 -0.0185 0.05 0.412 Other_T L1
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 3.66e-01 -0.0741 0.0817 0.412 Other_T L1
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.10e-01 -0.0562 0.0852 0.412 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 664822 sc-eQTL 9.15e-01 -0.011 0.103 0.426 B_Activated L2
ENSG00000116353 MECR 615780 sc-eQTL 8.47e-01 -0.0179 0.0926 0.426 B_Activated L2
ENSG00000159023 EPB41 959631 sc-eQTL 2.40e-01 -0.108 0.0913 0.426 B_Activated L2
ENSG00000162510 MATN1 -876863 sc-eQTL 4.47e-01 -0.0641 0.0841 0.426 B_Activated L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 6.37e-01 0.0278 0.0587 0.426 B_Activated L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 5.74e-03 0.26 0.0928 0.426 B_Activated L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 9.55e-01 -0.00474 0.0839 0.426 B_Activated L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.64e-01 0.0322 0.0738 0.414 B_Intermediate L2
ENSG00000116353 MECR 615780 sc-eQTL 7.54e-01 0.027 0.0861 0.414 B_Intermediate L2
ENSG00000159023 EPB41 959631 sc-eQTL 2.95e-01 0.0712 0.0678 0.414 B_Intermediate L2
ENSG00000162510 MATN1 -876863 sc-eQTL 5.57e-01 -0.0445 0.0758 0.414 B_Intermediate L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 7.88e-01 -0.0125 0.0466 0.414 B_Intermediate L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.59e-01 -0.0288 0.0653 0.414 B_Intermediate L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.04e-01 -0.0489 0.073 0.414 B_Intermediate L2
ENSG00000116350 SRSF4 664822 sc-eQTL 4.42e-01 -0.0587 0.0762 0.412 B_Memory L2
ENSG00000116353 MECR 615780 sc-eQTL 8.77e-01 0.0133 0.0861 0.412 B_Memory L2
ENSG00000159023 EPB41 959631 sc-eQTL 1.98e-01 0.0937 0.0725 0.412 B_Memory L2
ENSG00000162510 MATN1 -876863 sc-eQTL 1.36e-01 0.103 0.0688 0.412 B_Memory L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 6.34e-01 0.0293 0.0613 0.412 B_Memory L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.88e-01 -0.00102 0.0702 0.412 B_Memory L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.70e-02 -0.156 0.0815 0.412 B_Memory L2
ENSG00000116350 SRSF4 664822 sc-eQTL 9.26e-01 0.00614 0.0657 0.412 B_Naive1 L2
ENSG00000116353 MECR 615780 sc-eQTL 8.21e-01 0.0196 0.0864 0.412 B_Naive1 L2
ENSG00000159023 EPB41 959631 sc-eQTL 6.57e-02 0.113 0.0612 0.412 B_Naive1 L2
ENSG00000162510 MATN1 -876863 sc-eQTL 1.61e-01 -0.0896 0.0637 0.412 B_Naive1 L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 3.62e-01 0.0389 0.0426 0.412 B_Naive1 L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 5.73e-01 -0.0317 0.0561 0.412 B_Naive1 L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.60e-01 -0.0305 0.0693 0.412 B_Naive1 L2
ENSG00000116350 SRSF4 664822 sc-eQTL 8.85e-02 -0.126 0.0737 0.412 B_Naive2 L2
ENSG00000116353 MECR 615780 sc-eQTL 2.34e-02 -0.195 0.0855 0.412 B_Naive2 L2
ENSG00000159023 EPB41 959631 sc-eQTL 2.88e-01 0.0807 0.0758 0.412 B_Naive2 L2
ENSG00000162510 MATN1 -876863 sc-eQTL 8.75e-01 -0.0107 0.0685 0.412 B_Naive2 L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.88e-01 0.0323 0.0465 0.412 B_Naive2 L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.40e-01 -0.00515 0.0677 0.412 B_Naive2 L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 3.29e-01 -0.0715 0.073 0.412 B_Naive2 L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.19e-01 0.0426 0.0856 0.407 CD4_CTL L2
ENSG00000116353 MECR 615780 sc-eQTL 6.13e-01 -0.044 0.0868 0.407 CD4_CTL L2
ENSG00000159023 EPB41 959631 sc-eQTL 2.91e-01 0.0913 0.0862 0.407 CD4_CTL L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 9.07e-01 -0.00908 0.0779 0.407 CD4_CTL L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 7.70e-02 -0.15 0.0845 0.407 CD4_CTL L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.16e-01 -0.0612 0.075 0.407 CD4_CTL L2
ENSG00000116350 SRSF4 664822 sc-eQTL 3.03e-01 -0.0571 0.0553 0.412 CD4_Naive L2
ENSG00000116353 MECR 615780 sc-eQTL 8.46e-01 -0.0155 0.0798 0.412 CD4_Naive L2
ENSG00000159023 EPB41 959631 sc-eQTL 4.06e-01 -0.0351 0.0422 0.412 CD4_Naive L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 2.62e-01 0.0587 0.0522 0.412 CD4_Naive L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.63e-01 -0.00249 0.0531 0.412 CD4_Naive L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.74e-01 0.0256 0.061 0.412 CD4_Naive L2
ENSG00000116350 SRSF4 664822 sc-eQTL 4.70e-01 0.047 0.0648 0.412 CD4_TCM L2
ENSG00000116353 MECR 615780 sc-eQTL 9.16e-01 0.00928 0.0874 0.412 CD4_TCM L2
ENSG00000159023 EPB41 959631 sc-eQTL 6.02e-01 0.0256 0.0491 0.412 CD4_TCM L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 1.73e-01 0.0693 0.0507 0.412 CD4_TCM L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.36e-01 0.0306 0.0645 0.412 CD4_TCM L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.83e-01 0.0771 0.0717 0.412 CD4_TCM L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.33e-01 -0.0381 0.0797 0.412 CD4_TEM L2
ENSG00000116353 MECR 615780 sc-eQTL 1.28e-01 -0.133 0.0874 0.412 CD4_TEM L2
ENSG00000159023 EPB41 959631 sc-eQTL 8.10e-02 0.114 0.0652 0.412 CD4_TEM L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 5.23e-01 0.0438 0.0685 0.412 CD4_TEM L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.89e-01 0.0321 0.0802 0.412 CD4_TEM L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.48e-01 0.0476 0.079 0.412 CD4_TEM L2
ENSG00000116350 SRSF4 664822 sc-eQTL 3.54e-01 0.0659 0.0708 0.412 CD8_CTL L2
ENSG00000116353 MECR 615780 sc-eQTL 9.79e-01 0.00219 0.0836 0.412 CD8_CTL L2
ENSG00000159023 EPB41 959631 sc-eQTL 4.93e-01 0.0436 0.0636 0.412 CD8_CTL L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 7.42e-01 0.0254 0.0772 0.412 CD8_CTL L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 7.62e-01 -0.0247 0.0812 0.412 CD8_CTL L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.43e-02 -0.141 0.0758 0.412 CD8_CTL L2
ENSG00000116350 SRSF4 664822 sc-eQTL 2.69e-01 0.0815 0.0735 0.412 CD8_Naive L2
ENSG00000116353 MECR 615780 sc-eQTL 5.58e-01 0.0475 0.0809 0.412 CD8_Naive L2
ENSG00000159023 EPB41 959631 sc-eQTL 2.54e-01 -0.0634 0.0555 0.412 CD8_Naive L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 5.96e-01 -0.0302 0.0569 0.412 CD8_Naive L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 4.06e-01 -0.0591 0.0709 0.412 CD8_Naive L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 9.83e-01 -0.00166 0.0774 0.412 CD8_Naive L2
ENSG00000116350 SRSF4 664822 sc-eQTL 9.77e-01 0.00258 0.0885 0.419 CD8_TCM L2
ENSG00000116353 MECR 615780 sc-eQTL 5.31e-01 -0.0551 0.0878 0.419 CD8_TCM L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.35e-01 0.0641 0.0663 0.419 CD8_TCM L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.39e-01 0.0665 0.0859 0.419 CD8_TCM L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 5.81e-01 -0.044 0.0796 0.419 CD8_TCM L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 9.94e-01 -0.000633 0.0805 0.419 CD8_TCM L2
ENSG00000116350 SRSF4 664822 sc-eQTL 4.32e-02 -0.168 0.0827 0.397 CD8_TEM L2
ENSG00000116353 MECR 615780 sc-eQTL 2.25e-01 0.107 0.0879 0.397 CD8_TEM L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.48e-01 0.0826 0.0879 0.397 CD8_TEM L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 8.49e-01 0.016 0.0836 0.397 CD8_TEM L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 3.73e-01 0.0773 0.0866 0.397 CD8_TEM L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 1.01e-01 -0.129 0.078 0.397 CD8_TEM L2
ENSG00000116350 SRSF4 664822 sc-eQTL 9.65e-01 -0.00357 0.0816 0.409 MAIT L2
ENSG00000116353 MECR 615780 sc-eQTL 3.30e-01 0.0892 0.0914 0.409 MAIT L2
ENSG00000159023 EPB41 959631 sc-eQTL 5.55e-01 0.0455 0.0771 0.409 MAIT L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.58e-01 0.0553 0.0744 0.409 MAIT L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 5.78e-01 -0.0461 0.0829 0.409 MAIT L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.78e-01 -0.0927 0.0852 0.409 MAIT L2
ENSG00000116350 SRSF4 664822 sc-eQTL 1.76e-01 -0.121 0.0891 0.413 NK_CD56bright L2
ENSG00000116353 MECR 615780 sc-eQTL 5.56e-01 0.0524 0.0888 0.413 NK_CD56bright L2
ENSG00000159023 EPB41 959631 sc-eQTL 1.89e-01 0.103 0.078 0.413 NK_CD56bright L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 6.62e-01 0.0358 0.0816 0.413 NK_CD56bright L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.07e-01 -0.0423 0.082 0.413 NK_CD56bright L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 1.02e-01 0.132 0.0803 0.413 NK_CD56bright L2
ENSG00000116350 SRSF4 664822 sc-eQTL 4.01e-01 -0.0541 0.0642 0.409 NK_CD56dim L2
ENSG00000116353 MECR 615780 sc-eQTL 6.54e-01 0.0392 0.0875 0.409 NK_CD56dim L2
ENSG00000159023 EPB41 959631 sc-eQTL 1.09e-01 0.0975 0.0606 0.409 NK_CD56dim L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 9.63e-01 -0.00329 0.0708 0.409 NK_CD56dim L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.72e-01 0.00312 0.0887 0.409 NK_CD56dim L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.45e-01 0.0851 0.0729 0.409 NK_CD56dim L2
ENSG00000116350 SRSF4 664822 sc-eQTL 5.54e-01 -0.0515 0.0868 0.416 NK_HLA L2
ENSG00000116353 MECR 615780 sc-eQTL 2.93e-01 0.0916 0.0869 0.416 NK_HLA L2
ENSG00000159023 EPB41 959631 sc-eQTL 9.62e-01 0.00386 0.0818 0.416 NK_HLA L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 9.98e-02 0.127 0.0769 0.416 NK_HLA L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 1.23e-01 0.127 0.0818 0.416 NK_HLA L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.09e-01 0.0407 0.0796 0.416 NK_HLA L2
ENSG00000116350 SRSF4 664822 sc-eQTL 1.39e-01 0.106 0.0711 0.409 NK_cytokine L2
ENSG00000116353 MECR 615780 sc-eQTL 2.25e-02 -0.201 0.0874 0.409 NK_cytokine L2
ENSG00000159023 EPB41 959631 sc-eQTL 4.46e-01 0.0522 0.0684 0.409 NK_cytokine L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 1.42e-01 0.116 0.0785 0.409 NK_cytokine L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 7.09e-01 0.0312 0.0836 0.409 NK_cytokine L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.56e-01 -0.0347 0.0777 0.409 NK_cytokine L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.38e-02 0.188 0.101 0.419 PB L2
ENSG00000116353 MECR 615780 sc-eQTL 1.77e-01 -0.124 0.0912 0.419 PB L2
ENSG00000159023 EPB41 959631 sc-eQTL 4.71e-01 -0.0745 0.103 0.419 PB L2
ENSG00000162510 MATN1 -876863 sc-eQTL 5.25e-01 0.059 0.0926 0.419 PB L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 8.22e-01 0.015 0.0663 0.419 PB L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.66e-01 -0.0393 0.0907 0.419 PB L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.57e-01 -0.0719 0.0964 0.419 PB L2
ENSG00000116350 SRSF4 664822 sc-eQTL 7.07e-01 -0.0273 0.0725 0.417 Pro_T L2
ENSG00000116353 MECR 615780 sc-eQTL 1.17e-02 -0.186 0.073 0.417 Pro_T L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.73e-01 0.0673 0.0754 0.417 Pro_T L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.01e-01 0.0487 0.0578 0.417 Pro_T L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 9.85e-01 0.0015 0.0809 0.417 Pro_T L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.20e-02 -0.169 0.0735 0.417 Pro_T L2
ENSG00000116350 SRSF4 664822 sc-eQTL 4.31e-02 0.153 0.0752 0.412 Treg L2
ENSG00000116353 MECR 615780 sc-eQTL 1.47e-01 0.132 0.091 0.412 Treg L2
ENSG00000159023 EPB41 959631 sc-eQTL 5.23e-01 0.0407 0.0637 0.412 Treg L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 6.06e-02 0.145 0.0769 0.412 Treg L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 3.09e-01 0.0803 0.0788 0.412 Treg L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.97e-01 -0.0822 0.0787 0.412 Treg L2
ENSG00000116350 SRSF4 664822 sc-eQTL 7.58e-01 -0.0263 0.0853 0.415 cDC L2
ENSG00000116353 MECR 615780 sc-eQTL 1.56e-01 -0.136 0.0953 0.415 cDC L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.20e-01 -0.0802 0.0805 0.415 cDC L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.74e-01 0.042 0.0586 0.415 cDC L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.14e-01 0.099 0.0794 0.415 cDC L2
ENSG00000116350 SRSF4 664822 sc-eQTL 2.39e-01 0.0827 0.07 0.412 cMono_IL1B L2
ENSG00000116353 MECR 615780 sc-eQTL 4.83e-01 -0.061 0.0868 0.412 cMono_IL1B L2
ENSG00000159023 EPB41 959631 sc-eQTL 7.78e-01 -0.0179 0.0636 0.412 cMono_IL1B L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 1.60e-01 0.0679 0.0481 0.412 cMono_IL1B L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 4.06e-01 -0.0632 0.0759 0.412 cMono_IL1B L2
ENSG00000116350 SRSF4 664822 sc-eQTL 5.14e-01 -0.0437 0.0668 0.412 cMono_S100A L2
ENSG00000116353 MECR 615780 sc-eQTL 2.37e-01 0.104 0.0879 0.412 cMono_S100A L2
ENSG00000159023 EPB41 959631 sc-eQTL 5.98e-01 -0.0427 0.0809 0.412 cMono_S100A L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 9.05e-01 0.00606 0.0508 0.412 cMono_S100A L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.55e-01 0.0339 0.0757 0.412 cMono_S100A L2
ENSG00000116350 SRSF4 664822 sc-eQTL 8.96e-01 0.0145 0.111 0.394 gdT L2
ENSG00000116353 MECR 615780 sc-eQTL 3.68e-02 -0.229 0.109 0.394 gdT L2
ENSG00000159023 EPB41 959631 sc-eQTL 9.86e-01 0.00166 0.0966 0.394 gdT L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.49e-01 0.0844 0.111 0.394 gdT L2
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.85e-01 0.0417 0.103 0.394 gdT L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 5.64e-01 0.0575 0.0994 0.394 gdT L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.05e-01 -0.0437 0.0844 0.407 intMono L2
ENSG00000116353 MECR 615780 sc-eQTL 8.25e-01 -0.0199 0.0896 0.407 intMono L2
ENSG00000159023 EPB41 959631 sc-eQTL 7.96e-01 0.0226 0.0873 0.407 intMono L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.17e-01 0.0506 0.0622 0.407 intMono L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 1.31e-01 0.127 0.0841 0.407 intMono L2
ENSG00000116350 SRSF4 664822 sc-eQTL 6.69e-01 0.0355 0.0829 0.407 ncMono L2
ENSG00000116353 MECR 615780 sc-eQTL 9.18e-01 0.00923 0.0894 0.407 ncMono L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.93e-01 -0.0766 0.0895 0.407 ncMono L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 3.89e-01 0.0544 0.063 0.407 ncMono L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 2.75e-02 -0.175 0.079 0.407 ncMono L2
ENSG00000116350 SRSF4 664822 sc-eQTL 2.13e-01 -0.12 0.0958 0.412 pDC L2
ENSG00000116353 MECR 615780 sc-eQTL 4.06e-01 -0.0825 0.0989 0.412 pDC L2
ENSG00000159023 EPB41 959631 sc-eQTL 3.18e-01 -0.0943 0.0941 0.412 pDC L2
ENSG00000162511 LAPTM5 -911052 sc-eQTL 1.21e-01 0.117 0.0748 0.412 pDC L2
ENSG00000287510 AL137857.1 -884971 sc-eQTL 9.67e-01 -0.00348 0.0835 0.412 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 664822 sc-eQTL 9.70e-01 0.00259 0.0688 0.412 B_Memory LOneK1K
ENSG00000116353 MECR 615780 sc-eQTL 6.23e-01 -0.0418 0.0848 0.412 B_Memory LOneK1K
ENSG00000159023 EPB41 959631 sc-eQTL 2.87e-01 0.0648 0.0607 0.412 B_Memory LOneK1K
ENSG00000162510 MATN1 -876863 sc-eQTL 3.74e-01 -0.0669 0.075 0.412 B_Memory LOneK1K
ENSG00000162511 LAPTM5 -911052 sc-eQTL 8.28e-01 0.0103 0.0472 0.412 B_Memory LOneK1K
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 6.33e-01 0.0298 0.0624 0.412 B_Memory LOneK1K
ENSG00000287510 AL137857.1 -884971 sc-eQTL 7.35e-01 -0.0231 0.068 0.412 B_Memory LOneK1K
ENSG00000116350 SRSF4 664822 sc-eQTL 5.68e-01 -0.0353 0.0617 0.412 B_Naive LOneK1K
ENSG00000116353 MECR 615780 sc-eQTL 1.67e-01 -0.111 0.0802 0.412 B_Naive LOneK1K
ENSG00000159023 EPB41 959631 sc-eQTL 8.45e-02 0.102 0.0586 0.412 B_Naive LOneK1K
ENSG00000162510 MATN1 -876863 sc-eQTL 2.97e-01 -0.0608 0.0581 0.412 B_Naive LOneK1K
ENSG00000162511 LAPTM5 -911052 sc-eQTL 2.40e-01 0.0482 0.0409 0.412 B_Naive LOneK1K
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 3.54e-01 -0.0491 0.0528 0.412 B_Naive LOneK1K
ENSG00000287510 AL137857.1 -884971 sc-eQTL 7.12e-01 -0.0232 0.0629 0.412 B_Naive LOneK1K
ENSG00000116350 SRSF4 664822 sc-eQTL 6.69e-01 0.0268 0.0626 0.412 CD14_Mono LOneK1K
ENSG00000116353 MECR 615780 sc-eQTL 4.71e-01 0.0603 0.0836 0.412 CD14_Mono LOneK1K
ENSG00000159023 EPB41 959631 sc-eQTL 8.25e-01 -0.0138 0.0622 0.412 CD14_Mono LOneK1K
ENSG00000162511 LAPTM5 -911052 sc-eQTL 2.92e-01 0.0465 0.044 0.412 CD14_Mono LOneK1K
ENSG00000287510 AL137857.1 -884971 sc-eQTL 6.68e-01 -0.0305 0.0711 0.412 CD14_Mono LOneK1K
ENSG00000116350 SRSF4 664822 sc-eQTL 7.95e-01 -0.0197 0.0756 0.409 CD16_Mono LOneK1K
ENSG00000116353 MECR 615780 sc-eQTL 7.38e-01 0.0289 0.0861 0.409 CD16_Mono LOneK1K
ENSG00000159023 EPB41 959631 sc-eQTL 3.91e-01 -0.0749 0.0872 0.409 CD16_Mono LOneK1K
ENSG00000162511 LAPTM5 -911052 sc-eQTL 4.34e-01 0.0434 0.0553 0.409 CD16_Mono LOneK1K
ENSG00000287510 AL137857.1 -884971 sc-eQTL 9.05e-01 0.00957 0.0798 0.409 CD16_Mono LOneK1K
ENSG00000116350 SRSF4 664822 sc-eQTL 7.02e-01 0.0235 0.0612 0.409 NK_CD56dim LOneK1K
ENSG00000116353 MECR 615780 sc-eQTL 7.58e-01 -0.026 0.0844 0.409 NK_CD56dim LOneK1K
ENSG00000159023 EPB41 959631 sc-eQTL 2.16e-01 0.0712 0.0573 0.409 NK_CD56dim LOneK1K
ENSG00000162511 LAPTM5 -911052 sc-eQTL 7.14e-01 0.0256 0.0697 0.409 NK_CD56dim LOneK1K
ENSG00000186056 MATN1-AS1 -871782 sc-eQTL 5.07e-01 0.0534 0.0803 0.409 NK_CD56dim LOneK1K
ENSG00000287510 AL137857.1 -884971 sc-eQTL 3.66e-01 0.0627 0.0693 0.409 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 664822 eQTL 0.0328 -0.0224 0.0105 0.0 0.0 0.409

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000162510 \N -876863 2.74e-07 1.25e-07 4.48e-08 1.84e-07 9.24e-08 9.8e-08 1.53e-07 5.4e-08 1.45e-07 4.94e-08 1.57e-07 9e-08 1.45e-07 6.76e-08 6.04e-08 7.53e-08 3.93e-08 1.27e-07 5.75e-08 4.16e-08 1.13e-07 1.28e-07 1.39e-07 2.95e-08 1.4e-07 1.14e-07 1.07e-07 9.65e-08 1.09e-07 1.02e-07 9.7e-08 3.66e-08 3.61e-08 8.34e-08 7.51e-08 3.6e-08 5.08e-08 9.3e-08 6.54e-08 3.71e-08 5.43e-08 1.33e-07 5.22e-08 1.76e-08 4.7e-08 1.83e-08 1.22e-07 3.79e-09 4.88e-08
ENSG00000233427 \N 969386 2.69e-07 1.16e-07 3.88e-08 1.82e-07 9.16e-08 9.65e-08 1.44e-07 5.2e-08 1.44e-07 4.74e-08 1.6e-07 8.59e-08 1.41e-07 6.56e-08 5.99e-08 7.37e-08 3.98e-08 1.21e-07 5.39e-08 4.45e-08 1.04e-07 1.27e-07 1.34e-07 3.42e-08 1.37e-07 1.16e-07 1.06e-07 9.36e-08 1.08e-07 1.1e-07 9.91e-08 3.87e-08 3.16e-08 8.55e-08 8.76e-08 3.93e-08 5.01e-08 9.22e-08 6.78e-08 3.77e-08 4.36e-08 1.33e-07 4.89e-08 2.48e-08 5.43e-08 1.83e-08 1.19e-07 3.86e-09 4.79e-08