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Genes within 1Mb (chr1:29578238:C:T):

View on , UCSC , GTEx , gnomAD

Immune cell-type specific single cell cis-eQTLs in OASIS
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 396338 sc-eQTL 9.51e-01 0.00397 0.0644 0.462 B L1
ENSG00000116353 MECR 347296 sc-eQTL 2.90e-01 -0.0811 0.0766 0.462 B L1
ENSG00000120656 TAF12 935153 sc-eQTL 1.20e-01 0.091 0.0583 0.462 B L1
ENSG00000159023 EPB41 691147 sc-eQTL 8.36e-01 0.0126 0.0606 0.462 B L1
ENSG00000162419 GMEB1 909506 sc-eQTL 5.15e-01 0.0581 0.0891 0.462 B L1
ENSG00000197989 SNHG12 995106 sc-eQTL 3.08e-01 0.0627 0.0614 0.462 B L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.35e-01 -0.0719 0.0604 0.462 B L1
ENSG00000229388 LINC01715 935010 sc-eQTL 9.49e-03 -0.237 0.0906 0.462 B L1
ENSG00000116350 SRSF4 396338 sc-eQTL 1.04e-01 0.0978 0.0598 0.462 CD4T L1
ENSG00000116353 MECR 347296 sc-eQTL 6.79e-01 0.0348 0.0838 0.462 CD4T L1
ENSG00000120656 TAF12 935153 sc-eQTL 3.12e-02 -0.0939 0.0433 0.462 CD4T L1
ENSG00000159023 EPB41 691147 sc-eQTL 8.99e-01 0.00603 0.0472 0.462 CD4T L1
ENSG00000162419 GMEB1 909506 sc-eQTL 7.50e-01 0.0228 0.0715 0.462 CD4T L1
ENSG00000197989 SNHG12 995106 sc-eQTL 8.80e-01 0.00747 0.0496 0.462 CD4T L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.71e-01 0.0583 0.0529 0.462 CD4T L1
ENSG00000229388 LINC01715 935010 sc-eQTL 6.72e-01 -0.0379 0.0894 0.462 CD4T L1
ENSG00000116350 SRSF4 396338 sc-eQTL 2.43e-02 0.148 0.0654 0.462 CD8T L1
ENSG00000116353 MECR 347296 sc-eQTL 4.33e-01 -0.0696 0.0887 0.462 CD8T L1
ENSG00000120656 TAF12 935153 sc-eQTL 2.23e-02 -0.125 0.0544 0.462 CD8T L1
ENSG00000159023 EPB41 691147 sc-eQTL 6.88e-01 0.0217 0.054 0.462 CD8T L1
ENSG00000162419 GMEB1 909506 sc-eQTL 3.35e-01 -0.0798 0.0826 0.462 CD8T L1
ENSG00000197989 SNHG12 995106 sc-eQTL 4.58e-01 -0.0445 0.0598 0.462 CD8T L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 6.59e-01 0.0287 0.0651 0.462 CD8T L1
ENSG00000116350 SRSF4 396338 sc-eQTL 4.03e-01 0.0778 0.0929 0.466 DC L1
ENSG00000116353 MECR 347296 sc-eQTL 6.24e-02 0.191 0.102 0.466 DC L1
ENSG00000120656 TAF12 935153 sc-eQTL 6.33e-01 0.0437 0.0915 0.466 DC L1
ENSG00000159023 EPB41 691147 sc-eQTL 3.63e-01 -0.0833 0.0913 0.466 DC L1
ENSG00000162419 GMEB1 909506 sc-eQTL 3.94e-01 0.0839 0.0982 0.466 DC L1
ENSG00000197989 SNHG12 995106 sc-eQTL 1.33e-01 0.153 0.101 0.466 DC L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 6.30e-01 0.0353 0.0731 0.466 DC L1
ENSG00000116350 SRSF4 396338 sc-eQTL 9.62e-01 -0.00301 0.0623 0.462 Mono L1
ENSG00000116353 MECR 347296 sc-eQTL 7.74e-02 -0.161 0.091 0.462 Mono L1
ENSG00000120656 TAF12 935153 sc-eQTL 1.58e-01 -0.0876 0.0619 0.462 Mono L1
ENSG00000159023 EPB41 691147 sc-eQTL 8.50e-01 -0.0133 0.0701 0.462 Mono L1
ENSG00000162419 GMEB1 909506 sc-eQTL 3.77e-01 -0.0685 0.0774 0.462 Mono L1
ENSG00000197989 SNHG12 995106 sc-eQTL 6.89e-01 0.0278 0.0692 0.462 Mono L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.42e-01 -0.0226 0.0687 0.462 Mono L1
ENSG00000116350 SRSF4 396338 sc-eQTL 3.30e-01 0.0697 0.0713 0.459 NK L1
ENSG00000116353 MECR 347296 sc-eQTL 1.73e-02 -0.223 0.0928 0.459 NK L1
ENSG00000120656 TAF12 935153 sc-eQTL 8.67e-01 0.00915 0.0544 0.459 NK L1
ENSG00000159023 EPB41 691147 sc-eQTL 7.00e-01 -0.0247 0.064 0.459 NK L1
ENSG00000162419 GMEB1 909506 sc-eQTL 1.33e-01 -0.128 0.0851 0.459 NK L1
ENSG00000197989 SNHG12 995106 sc-eQTL 8.23e-01 -0.0141 0.0632 0.459 NK L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 4.21e-01 0.0602 0.0746 0.459 NK L1
ENSG00000116350 SRSF4 396338 sc-eQTL 7.01e-01 0.0264 0.0688 0.462 Other_T L1
ENSG00000116353 MECR 347296 sc-eQTL 8.58e-01 0.0146 0.0816 0.462 Other_T L1
ENSG00000120656 TAF12 935153 sc-eQTL 6.52e-01 0.0335 0.0742 0.462 Other_T L1
ENSG00000159023 EPB41 691147 sc-eQTL 5.99e-01 -0.039 0.0739 0.462 Other_T L1
ENSG00000162419 GMEB1 909506 sc-eQTL 6.27e-02 -0.172 0.0921 0.462 Other_T L1
ENSG00000197989 SNHG12 995106 sc-eQTL 4.57e-01 -0.0528 0.0709 0.462 Other_T L1
ENSG00000198492 YTHDF2 841617 sc-eQTL 4.49e-02 0.147 0.0728 0.462 Other_T L1
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 396338 sc-eQTL 3.52e-01 0.104 0.111 0.474 B_Activated L2
ENSG00000116353 MECR 347296 sc-eQTL 2.02e-01 0.128 0.0997 0.474 B_Activated L2
ENSG00000120656 TAF12 935153 sc-eQTL 7.34e-01 0.0348 0.102 0.474 B_Activated L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.18e-01 0.0229 0.0991 0.474 B_Activated L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.82e-01 0.0443 0.108 0.474 B_Activated L2
ENSG00000197989 SNHG12 995106 sc-eQTL 7.70e-01 0.0317 0.108 0.474 B_Activated L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 8.48e-01 -0.0216 0.113 0.474 B_Activated L2
ENSG00000229388 LINC01715 935010 sc-eQTL 9.23e-01 0.00837 0.0867 0.474 B_Activated L2
ENSG00000116350 SRSF4 396338 sc-eQTL 1.37e-01 -0.123 0.0822 0.461 B_Intermediate L2
ENSG00000116353 MECR 347296 sc-eQTL 3.37e-01 -0.0926 0.0962 0.461 B_Intermediate L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.57e-01 -0.0045 0.0843 0.461 B_Intermediate L2
ENSG00000159023 EPB41 691147 sc-eQTL 1.80e-01 -0.102 0.0758 0.461 B_Intermediate L2
ENSG00000162419 GMEB1 909506 sc-eQTL 3.48e-01 0.095 0.101 0.461 B_Intermediate L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.12e-01 0.116 0.0725 0.461 B_Intermediate L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 6.26e-01 -0.0412 0.0843 0.461 B_Intermediate L2
ENSG00000229388 LINC01715 935010 sc-eQTL 2.91e-01 -0.0982 0.0928 0.461 B_Intermediate L2
ENSG00000116350 SRSF4 396338 sc-eQTL 6.69e-01 -0.036 0.0839 0.459 B_Memory L2
ENSG00000116353 MECR 347296 sc-eQTL 6.12e-01 -0.0481 0.0947 0.459 B_Memory L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.53e-01 0.00522 0.088 0.459 B_Memory L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.12e-01 -0.0191 0.0801 0.459 B_Memory L2
ENSG00000162419 GMEB1 909506 sc-eQTL 8.17e-01 -0.0211 0.0912 0.459 B_Memory L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.57e-01 0.118 0.0828 0.459 B_Memory L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 9.20e-02 -0.152 0.0898 0.459 B_Memory L2
ENSG00000229388 LINC01715 935010 sc-eQTL 7.00e-01 0.0337 0.0875 0.459 B_Memory L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.32e-01 -0.0157 0.074 0.462 B_Naive1 L2
ENSG00000116353 MECR 347296 sc-eQTL 4.71e-01 -0.0702 0.0972 0.462 B_Naive1 L2
ENSG00000120656 TAF12 935153 sc-eQTL 4.32e-01 0.0623 0.0791 0.462 B_Naive1 L2
ENSG00000159023 EPB41 691147 sc-eQTL 4.03e-01 0.058 0.0693 0.462 B_Naive1 L2
ENSG00000162419 GMEB1 909506 sc-eQTL 9.23e-01 0.00876 0.09 0.462 B_Naive1 L2
ENSG00000197989 SNHG12 995106 sc-eQTL 2.58e-01 0.0758 0.0668 0.462 B_Naive1 L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 9.21e-01 0.00818 0.0822 0.462 B_Naive1 L2
ENSG00000229388 LINC01715 935010 sc-eQTL 1.21e-01 -0.15 0.0964 0.462 B_Naive1 L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.65e-01 -0.0139 0.082 0.459 B_Naive2 L2
ENSG00000116353 MECR 347296 sc-eQTL 5.36e-01 -0.0591 0.0955 0.459 B_Naive2 L2
ENSG00000120656 TAF12 935153 sc-eQTL 4.18e-02 0.183 0.0893 0.459 B_Naive2 L2
ENSG00000159023 EPB41 691147 sc-eQTL 4.31e-01 -0.0662 0.0838 0.459 B_Naive2 L2
ENSG00000162419 GMEB1 909506 sc-eQTL 7.26e-01 0.0344 0.0981 0.459 B_Naive2 L2
ENSG00000197989 SNHG12 995106 sc-eQTL 4.25e-01 0.0755 0.0944 0.459 B_Naive2 L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 9.20e-01 0.00928 0.0923 0.459 B_Naive2 L2
ENSG00000229388 LINC01715 935010 sc-eQTL 4.41e-01 -0.0736 0.0954 0.459 B_Naive2 L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.28e-01 0.0199 0.091 0.466 CD4_CTL L2
ENSG00000116353 MECR 347296 sc-eQTL 6.78e-01 0.0384 0.0923 0.466 CD4_CTL L2
ENSG00000120656 TAF12 935153 sc-eQTL 5.32e-01 0.0583 0.093 0.466 CD4_CTL L2
ENSG00000159023 EPB41 691147 sc-eQTL 9.68e-01 0.00364 0.0918 0.466 CD4_CTL L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.60e-01 -0.0429 0.0973 0.466 CD4_CTL L2
ENSG00000197989 SNHG12 995106 sc-eQTL 8.08e-01 0.0223 0.0917 0.466 CD4_CTL L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 5.34e-01 -0.0528 0.0847 0.466 CD4_CTL L2
ENSG00000229388 LINC01715 935010 sc-eQTL 4.02e-01 0.0641 0.0764 0.466 CD4_CTL L2
ENSG00000116350 SRSF4 396338 sc-eQTL 2.69e-01 0.0685 0.0618 0.462 CD4_Naive L2
ENSG00000116353 MECR 347296 sc-eQTL 2.15e-01 0.11 0.0889 0.462 CD4_Naive L2
ENSG00000120656 TAF12 935153 sc-eQTL 7.44e-02 -0.0922 0.0514 0.462 CD4_Naive L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.19e-01 -0.0108 0.0473 0.462 CD4_Naive L2
ENSG00000162419 GMEB1 909506 sc-eQTL 1.67e-01 0.109 0.0783 0.462 CD4_Naive L2
ENSG00000197989 SNHG12 995106 sc-eQTL 8.80e-01 -0.00765 0.0507 0.462 CD4_Naive L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 1.13e-01 0.0862 0.0542 0.462 CD4_Naive L2
ENSG00000229388 LINC01715 935010 sc-eQTL 7.76e-01 0.027 0.0948 0.462 CD4_Naive L2
ENSG00000116350 SRSF4 396338 sc-eQTL 1.70e-02 0.171 0.0711 0.462 CD4_TCM L2
ENSG00000116353 MECR 347296 sc-eQTL 2.17e-01 -0.12 0.0967 0.462 CD4_TCM L2
ENSG00000120656 TAF12 935153 sc-eQTL 7.62e-01 0.0174 0.0572 0.462 CD4_TCM L2
ENSG00000159023 EPB41 691147 sc-eQTL 2.65e-01 0.0607 0.0543 0.462 CD4_TCM L2
ENSG00000162419 GMEB1 909506 sc-eQTL 4.56e-01 -0.062 0.083 0.462 CD4_TCM L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.63e-01 0.0842 0.0601 0.462 CD4_TCM L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 3.55e-01 -0.0659 0.0711 0.462 CD4_TCM L2
ENSG00000229388 LINC01715 935010 sc-eQTL 8.98e-01 0.0126 0.098 0.462 CD4_TCM L2
ENSG00000116350 SRSF4 396338 sc-eQTL 1.70e-01 0.121 0.0883 0.462 CD4_TEM L2
ENSG00000116353 MECR 347296 sc-eQTL 4.54e-01 0.0732 0.0976 0.462 CD4_TEM L2
ENSG00000120656 TAF12 935153 sc-eQTL 1.18e-01 -0.124 0.079 0.462 CD4_TEM L2
ENSG00000159023 EPB41 691147 sc-eQTL 1.26e-01 -0.111 0.0726 0.462 CD4_TEM L2
ENSG00000162419 GMEB1 909506 sc-eQTL 4.01e-01 -0.0788 0.0936 0.462 CD4_TEM L2
ENSG00000197989 SNHG12 995106 sc-eQTL 7.32e-01 0.0249 0.0728 0.462 CD4_TEM L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 3.07e-01 0.0866 0.0846 0.462 CD4_TEM L2
ENSG00000229388 LINC01715 935010 sc-eQTL 8.94e-01 -0.0119 0.0889 0.462 CD4_TEM L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.16e-01 0.0187 0.0803 0.462 CD8_CTL L2
ENSG00000116353 MECR 347296 sc-eQTL 4.54e-01 -0.0709 0.0945 0.462 CD8_CTL L2
ENSG00000120656 TAF12 935153 sc-eQTL 2.20e-01 -0.0945 0.0768 0.462 CD8_CTL L2
ENSG00000159023 EPB41 691147 sc-eQTL 3.37e-01 0.0692 0.0719 0.462 CD8_CTL L2
ENSG00000162419 GMEB1 909506 sc-eQTL 9.21e-01 -0.00889 0.0898 0.462 CD8_CTL L2
ENSG00000197989 SNHG12 995106 sc-eQTL 3.26e-01 0.0807 0.082 0.462 CD8_CTL L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 1.27e-01 0.129 0.0843 0.462 CD8_CTL L2
ENSG00000116350 SRSF4 396338 sc-eQTL 4.85e-02 0.161 0.0809 0.462 CD8_Naive L2
ENSG00000116353 MECR 347296 sc-eQTL 5.95e-01 -0.0478 0.0897 0.462 CD8_Naive L2
ENSG00000120656 TAF12 935153 sc-eQTL 1.31e-01 -0.1 0.0662 0.462 CD8_Naive L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.03e-01 -0.0154 0.0617 0.462 CD8_Naive L2
ENSG00000162419 GMEB1 909506 sc-eQTL 2.45e-01 -0.106 0.0905 0.462 CD8_Naive L2
ENSG00000197989 SNHG12 995106 sc-eQTL 2.22e-01 -0.0785 0.064 0.462 CD8_Naive L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 5.16e-01 -0.0432 0.0663 0.462 CD8_Naive L2
ENSG00000116350 SRSF4 396338 sc-eQTL 1.46e-03 0.305 0.0943 0.461 CD8_TCM L2
ENSG00000116353 MECR 347296 sc-eQTL 4.68e-01 -0.0697 0.096 0.461 CD8_TCM L2
ENSG00000120656 TAF12 935153 sc-eQTL 6.54e-01 -0.0379 0.0844 0.461 CD8_TCM L2
ENSG00000159023 EPB41 691147 sc-eQTL 6.80e-01 0.03 0.0726 0.461 CD8_TCM L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.53e-01 -0.0444 0.0985 0.461 CD8_TCM L2
ENSG00000197989 SNHG12 995106 sc-eQTL 5.36e-01 0.0521 0.0841 0.461 CD8_TCM L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 1.65e-01 0.125 0.0897 0.461 CD8_TCM L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.13e-01 -0.0219 0.0928 0.463 CD8_TEM L2
ENSG00000116353 MECR 347296 sc-eQTL 9.43e-01 0.00705 0.0979 0.463 CD8_TEM L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.02e-01 -0.0113 0.0919 0.463 CD8_TEM L2
ENSG00000159023 EPB41 691147 sc-eQTL 7.26e-01 0.0343 0.0978 0.463 CD8_TEM L2
ENSG00000162419 GMEB1 909506 sc-eQTL 5.26e-01 -0.0643 0.101 0.463 CD8_TEM L2
ENSG00000197989 SNHG12 995106 sc-eQTL 8.49e-01 -0.0166 0.0871 0.463 CD8_TEM L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 4.56e-01 0.0734 0.0982 0.463 CD8_TEM L2
ENSG00000116350 SRSF4 396338 sc-eQTL 2.68e-01 0.0988 0.089 0.465 MAIT L2
ENSG00000116353 MECR 347296 sc-eQTL 7.19e-01 -0.036 0.1 0.465 MAIT L2
ENSG00000120656 TAF12 935153 sc-eQTL 5.14e-01 0.0548 0.0838 0.465 MAIT L2
ENSG00000159023 EPB41 691147 sc-eQTL 6.32e-01 -0.0405 0.0843 0.465 MAIT L2
ENSG00000162419 GMEB1 909506 sc-eQTL 1.77e-01 -0.134 0.099 0.465 MAIT L2
ENSG00000197989 SNHG12 995106 sc-eQTL 9.60e-01 -0.00481 0.0952 0.465 MAIT L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.77e-01 0.0255 0.0899 0.465 MAIT L2
ENSG00000116350 SRSF4 396338 sc-eQTL 3.42e-01 0.0961 0.101 0.462 NK_CD56bright L2
ENSG00000116353 MECR 347296 sc-eQTL 7.47e-01 -0.0324 0.1 0.462 NK_CD56bright L2
ENSG00000120656 TAF12 935153 sc-eQTL 1.46e-01 0.137 0.094 0.462 NK_CD56bright L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.92e-01 -0.012 0.0884 0.462 NK_CD56bright L2
ENSG00000162419 GMEB1 909506 sc-eQTL 5.48e-01 0.0626 0.104 0.462 NK_CD56bright L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.46e-01 0.135 0.0925 0.462 NK_CD56bright L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 3.09e-02 0.217 0.0996 0.462 NK_CD56bright L2
ENSG00000116350 SRSF4 396338 sc-eQTL 5.60e-01 0.043 0.0736 0.459 NK_CD56dim L2
ENSG00000116353 MECR 347296 sc-eQTL 3.76e-01 -0.0887 0.1 0.459 NK_CD56dim L2
ENSG00000120656 TAF12 935153 sc-eQTL 7.89e-01 0.0185 0.069 0.459 NK_CD56dim L2
ENSG00000159023 EPB41 691147 sc-eQTL 6.51e-01 0.0316 0.0698 0.459 NK_CD56dim L2
ENSG00000162419 GMEB1 909506 sc-eQTL 5.92e-02 -0.183 0.0962 0.459 NK_CD56dim L2
ENSG00000197989 SNHG12 995106 sc-eQTL 5.65e-01 -0.0447 0.0776 0.459 NK_CD56dim L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 5.65e-01 0.0495 0.0858 0.459 NK_CD56dim L2
ENSG00000116350 SRSF4 396338 sc-eQTL 5.38e-01 -0.0593 0.0961 0.454 NK_HLA L2
ENSG00000116353 MECR 347296 sc-eQTL 2.33e-02 -0.218 0.0953 0.454 NK_HLA L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.96e-02 -0.163 0.0984 0.454 NK_HLA L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.81e-01 -0.0136 0.0906 0.454 NK_HLA L2
ENSG00000162419 GMEB1 909506 sc-eQTL 2.98e-03 -0.307 0.102 0.454 NK_HLA L2
ENSG00000197989 SNHG12 995106 sc-eQTL 6.66e-02 -0.176 0.0953 0.454 NK_HLA L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 1.50e-01 0.146 0.101 0.454 NK_HLA L2
ENSG00000116350 SRSF4 396338 sc-eQTL 9.00e-01 -0.00998 0.0796 0.459 NK_cytokine L2
ENSG00000116353 MECR 347296 sc-eQTL 1.33e-01 -0.148 0.0981 0.459 NK_cytokine L2
ENSG00000120656 TAF12 935153 sc-eQTL 6.99e-01 0.0293 0.0755 0.459 NK_cytokine L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.17e-01 0.0177 0.0763 0.459 NK_cytokine L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.02e-01 -0.0483 0.0925 0.459 NK_cytokine L2
ENSG00000197989 SNHG12 995106 sc-eQTL 5.25e-01 0.0457 0.0718 0.459 NK_cytokine L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.12e-01 -0.109 0.087 0.459 NK_cytokine L2
ENSG00000116350 SRSF4 396338 sc-eQTL 4.85e-01 0.0914 0.131 0.459 PB L2
ENSG00000116353 MECR 347296 sc-eQTL 1.09e-01 -0.188 0.117 0.459 PB L2
ENSG00000120656 TAF12 935153 sc-eQTL 8.41e-01 -0.0222 0.11 0.459 PB L2
ENSG00000159023 EPB41 691147 sc-eQTL 4.54e-02 0.263 0.13 0.459 PB L2
ENSG00000162419 GMEB1 909506 sc-eQTL 1.77e-02 0.317 0.132 0.459 PB L2
ENSG00000197989 SNHG12 995106 sc-eQTL 3.34e-01 0.132 0.136 0.459 PB L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.61e-01 0.0342 0.112 0.459 PB L2
ENSG00000229388 LINC01715 935010 sc-eQTL 5.84e-02 -0.242 0.127 0.459 PB L2
ENSG00000116350 SRSF4 396338 sc-eQTL 5.17e-01 -0.0524 0.0806 0.461 Pro_T L2
ENSG00000116353 MECR 347296 sc-eQTL 4.00e-01 -0.0695 0.0823 0.461 Pro_T L2
ENSG00000120656 TAF12 935153 sc-eQTL 4.68e-01 -0.0658 0.0904 0.461 Pro_T L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.98e-01 -0.0108 0.084 0.461 Pro_T L2
ENSG00000162419 GMEB1 909506 sc-eQTL 5.44e-01 -0.0605 0.0996 0.461 Pro_T L2
ENSG00000197989 SNHG12 995106 sc-eQTL 7.37e-01 -0.0296 0.0879 0.461 Pro_T L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.64e-01 0.0927 0.0829 0.461 Pro_T L2
ENSG00000116350 SRSF4 396338 sc-eQTL 5.97e-01 -0.0458 0.0865 0.462 Treg L2
ENSG00000116353 MECR 347296 sc-eQTL 9.70e-01 0.00389 0.104 0.462 Treg L2
ENSG00000120656 TAF12 935153 sc-eQTL 6.88e-01 -0.0346 0.0858 0.462 Treg L2
ENSG00000159023 EPB41 691147 sc-eQTL 1.30e-01 0.11 0.0723 0.462 Treg L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.40e-01 0.0451 0.0962 0.462 Treg L2
ENSG00000197989 SNHG12 995106 sc-eQTL 2.15e-01 0.0887 0.0714 0.462 Treg L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.81e-01 0.0269 0.0966 0.462 Treg L2
ENSG00000229388 LINC01715 935010 sc-eQTL 1.82e-02 -0.222 0.0934 0.462 Treg L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.63e-01 0.0165 0.0955 0.468 cDC L2
ENSG00000116353 MECR 347296 sc-eQTL 1.78e-01 0.144 0.107 0.468 cDC L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.19e-01 -0.01 0.0987 0.468 cDC L2
ENSG00000159023 EPB41 691147 sc-eQTL 4.47e-01 -0.0688 0.0902 0.468 cDC L2
ENSG00000162419 GMEB1 909506 sc-eQTL 2.57e-01 0.121 0.107 0.468 cDC L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.78e-01 0.132 0.0975 0.468 cDC L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.32e-01 -0.0314 0.0915 0.468 cDC L2
ENSG00000116350 SRSF4 396338 sc-eQTL 3.92e-01 -0.0663 0.0773 0.462 cMono_IL1B L2
ENSG00000116353 MECR 347296 sc-eQTL 4.36e-02 -0.192 0.0948 0.462 cMono_IL1B L2
ENSG00000120656 TAF12 935153 sc-eQTL 6.62e-02 -0.134 0.0724 0.462 cMono_IL1B L2
ENSG00000159023 EPB41 691147 sc-eQTL 5.43e-01 0.0426 0.07 0.462 cMono_IL1B L2
ENSG00000162419 GMEB1 909506 sc-eQTL 1.01e-01 -0.139 0.0847 0.462 cMono_IL1B L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.74e-01 0.104 0.0765 0.462 cMono_IL1B L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.29e-01 -0.0874 0.0724 0.462 cMono_IL1B L2
ENSG00000116350 SRSF4 396338 sc-eQTL 4.21e-01 0.0579 0.0718 0.462 cMono_S100A L2
ENSG00000116353 MECR 347296 sc-eQTL 9.24e-01 0.00908 0.0948 0.462 cMono_S100A L2
ENSG00000120656 TAF12 935153 sc-eQTL 5.99e-01 0.0475 0.0901 0.462 cMono_S100A L2
ENSG00000159023 EPB41 691147 sc-eQTL 6.17e-01 -0.0436 0.087 0.462 cMono_S100A L2
ENSG00000162419 GMEB1 909506 sc-eQTL 5.65e-01 -0.0528 0.0915 0.462 cMono_S100A L2
ENSG00000197989 SNHG12 995106 sc-eQTL 8.99e-01 0.0114 0.089 0.462 cMono_S100A L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 3.56e-01 0.0893 0.0964 0.462 cMono_S100A L2
ENSG00000116350 SRSF4 396338 sc-eQTL 8.79e-02 0.193 0.112 0.458 gdT L2
ENSG00000116353 MECR 347296 sc-eQTL 1.26e-01 0.172 0.112 0.458 gdT L2
ENSG00000120656 TAF12 935153 sc-eQTL 2.34e-02 0.242 0.106 0.458 gdT L2
ENSG00000159023 EPB41 691147 sc-eQTL 3.02e-01 0.102 0.0987 0.458 gdT L2
ENSG00000162419 GMEB1 909506 sc-eQTL 8.16e-01 0.025 0.107 0.458 gdT L2
ENSG00000197989 SNHG12 995106 sc-eQTL 1.38e-01 -0.148 0.0992 0.458 gdT L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.34e-01 0.0378 0.111 0.458 gdT L2
ENSG00000116350 SRSF4 396338 sc-eQTL 3.90e-01 0.077 0.0895 0.46 intMono L2
ENSG00000116353 MECR 347296 sc-eQTL 8.72e-01 -0.0154 0.0951 0.46 intMono L2
ENSG00000120656 TAF12 935153 sc-eQTL 5.48e-01 -0.0512 0.0851 0.46 intMono L2
ENSG00000159023 EPB41 691147 sc-eQTL 8.91e-01 -0.0128 0.0927 0.46 intMono L2
ENSG00000162419 GMEB1 909506 sc-eQTL 1.62e-02 0.227 0.0938 0.46 intMono L2
ENSG00000197989 SNHG12 995106 sc-eQTL 9.11e-01 0.0104 0.0931 0.46 intMono L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 2.95e-01 -0.104 0.0993 0.46 intMono L2
ENSG00000116350 SRSF4 396338 sc-eQTL 6.09e-01 0.0466 0.091 0.462 ncMono L2
ENSG00000116353 MECR 347296 sc-eQTL 3.44e-01 0.0929 0.098 0.462 ncMono L2
ENSG00000120656 TAF12 935153 sc-eQTL 2.19e-01 0.112 0.0904 0.462 ncMono L2
ENSG00000159023 EPB41 691147 sc-eQTL 6.85e-01 0.0399 0.0984 0.462 ncMono L2
ENSG00000162419 GMEB1 909506 sc-eQTL 6.80e-01 0.0416 0.101 0.462 ncMono L2
ENSG00000197989 SNHG12 995106 sc-eQTL 8.68e-02 -0.141 0.0819 0.462 ncMono L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 8.63e-01 -0.0161 0.0932 0.462 ncMono L2
ENSG00000116350 SRSF4 396338 sc-eQTL 5.75e-01 0.0624 0.111 0.449 pDC L2
ENSG00000116353 MECR 347296 sc-eQTL 7.42e-01 -0.0378 0.115 0.449 pDC L2
ENSG00000120656 TAF12 935153 sc-eQTL 9.55e-01 0.00629 0.111 0.449 pDC L2
ENSG00000159023 EPB41 691147 sc-eQTL 4.31e-01 -0.086 0.109 0.449 pDC L2
ENSG00000162419 GMEB1 909506 sc-eQTL 3.71e-01 -0.102 0.113 0.449 pDC L2
ENSG00000197989 SNHG12 995106 sc-eQTL 4.62e-01 0.0776 0.105 0.449 pDC L2
ENSG00000198492 YTHDF2 841617 sc-eQTL 7.88e-01 -0.0235 0.0869 0.449 pDC L2
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
MAF
Cell type
Cluster resolution
ENSG00000116350 SRSF4 396338 sc-eQTL 4.72e-01 -0.0548 0.076 0.462 B_Memory LOneK1K
ENSG00000116353 MECR 347296 sc-eQTL 7.65e-01 -0.028 0.0939 0.462 B_Memory LOneK1K
ENSG00000120656 TAF12 935153 sc-eQTL 9.87e-01 0.00126 0.0754 0.462 B_Memory LOneK1K
ENSG00000159023 EPB41 691147 sc-eQTL 4.50e-01 -0.0509 0.0672 0.462 B_Memory LOneK1K
ENSG00000162419 GMEB1 909506 sc-eQTL 5.27e-01 0.057 0.0901 0.462 B_Memory LOneK1K
ENSG00000197989 SNHG12 995106 sc-eQTL 6.48e-02 0.121 0.0651 0.462 B_Memory LOneK1K
ENSG00000198492 YTHDF2 841617 sc-eQTL 1.24e-01 -0.121 0.0783 0.462 B_Memory LOneK1K
ENSG00000229388 LINC01715 935010 sc-eQTL 3.00e-01 -0.0972 0.0936 0.462 B_Memory LOneK1K
ENSG00000116350 SRSF4 396338 sc-eQTL 8.70e-01 -0.0113 0.0691 0.462 B_Naive LOneK1K
ENSG00000116353 MECR 347296 sc-eQTL 3.68e-01 -0.0812 0.09 0.462 B_Naive LOneK1K
ENSG00000120656 TAF12 935153 sc-eQTL 1.71e-01 0.101 0.0739 0.462 B_Naive LOneK1K
ENSG00000159023 EPB41 691147 sc-eQTL 8.76e-01 -0.0103 0.0661 0.462 B_Naive LOneK1K
ENSG00000162419 GMEB1 909506 sc-eQTL 9.18e-01 -0.00964 0.0931 0.462 B_Naive LOneK1K
ENSG00000197989 SNHG12 995106 sc-eQTL 1.76e-01 0.0892 0.0657 0.462 B_Naive LOneK1K
ENSG00000198492 YTHDF2 841617 sc-eQTL 8.76e-01 0.0122 0.0778 0.462 B_Naive LOneK1K
ENSG00000229388 LINC01715 935010 sc-eQTL 9.62e-02 -0.16 0.0959 0.462 B_Naive LOneK1K
ENSG00000116350 SRSF4 396338 sc-eQTL 6.97e-01 -0.0268 0.0689 0.462 CD14_Mono LOneK1K
ENSG00000116353 MECR 347296 sc-eQTL 1.71e-01 -0.126 0.0918 0.462 CD14_Mono LOneK1K
ENSG00000120656 TAF12 935153 sc-eQTL 9.83e-02 -0.114 0.0685 0.462 CD14_Mono LOneK1K
ENSG00000159023 EPB41 691147 sc-eQTL 9.06e-01 0.00809 0.0685 0.462 CD14_Mono LOneK1K
ENSG00000162419 GMEB1 909506 sc-eQTL 1.27e-01 -0.119 0.0777 0.462 CD14_Mono LOneK1K
ENSG00000197989 SNHG12 995106 sc-eQTL 2.10e-01 0.0947 0.0753 0.462 CD14_Mono LOneK1K
ENSG00000198492 YTHDF2 841617 sc-eQTL 9.45e-01 -0.00506 0.0733 0.462 CD14_Mono LOneK1K
ENSG00000116350 SRSF4 396338 sc-eQTL 6.42e-01 0.0376 0.0807 0.457 CD16_Mono LOneK1K
ENSG00000116353 MECR 347296 sc-eQTL 8.91e-01 0.0126 0.092 0.457 CD16_Mono LOneK1K
ENSG00000120656 TAF12 935153 sc-eQTL 5.49e-01 -0.0487 0.0811 0.457 CD16_Mono LOneK1K
ENSG00000159023 EPB41 691147 sc-eQTL 9.79e-01 0.00249 0.0933 0.457 CD16_Mono LOneK1K
ENSG00000162419 GMEB1 909506 sc-eQTL 1.17e-01 0.143 0.091 0.457 CD16_Mono LOneK1K
ENSG00000197989 SNHG12 995106 sc-eQTL 5.63e-02 -0.166 0.0865 0.457 CD16_Mono LOneK1K
ENSG00000198492 YTHDF2 841617 sc-eQTL 4.28e-01 -0.0748 0.0941 0.457 CD16_Mono LOneK1K
ENSG00000116350 SRSF4 396338 sc-eQTL 4.72e-01 0.0501 0.0695 0.459 NK_CD56dim LOneK1K
ENSG00000116353 MECR 347296 sc-eQTL 1.31e-02 -0.236 0.0945 0.459 NK_CD56dim LOneK1K
ENSG00000120656 TAF12 935153 sc-eQTL 8.89e-01 -0.0078 0.056 0.459 NK_CD56dim LOneK1K
ENSG00000159023 EPB41 691147 sc-eQTL 9.44e-01 -0.00456 0.0653 0.459 NK_CD56dim LOneK1K
ENSG00000162419 GMEB1 909506 sc-eQTL 4.78e-02 -0.175 0.088 0.459 NK_CD56dim LOneK1K
ENSG00000197989 SNHG12 995106 sc-eQTL 7.52e-01 -0.0211 0.0666 0.459 NK_CD56dim LOneK1K
ENSG00000198492 YTHDF2 841617 sc-eQTL 9.55e-01 0.00425 0.0747 0.459 NK_CD56dim LOneK1K

Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 396338 eQTL 0.0126 0.0254 0.0102 0.0 0.0 0.389

Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000188060 \N 986038 2.69e-07 1.19e-07 4.08e-08 1.82e-07 9.16e-08 9.65e-08 1.44e-07 5.37e-08 1.45e-07 4.74e-08 1.62e-07 8.55e-08 1.41e-07 6.56e-08 5.99e-08 7.3e-08 3.98e-08 1.26e-07 5.39e-08 4e-08 1.04e-07 1.27e-07 1.34e-07 3.42e-08 1.37e-07 1.14e-07 1.06e-07 9.57e-08 1.08e-07 1.07e-07 9.64e-08 3.7e-08 3.3e-08 8.55e-08 8.76e-08 3.94e-08 5.01e-08 9.22e-08 6.78e-08 3.77e-08 5.14e-08 1.33e-07 4.52e-08 2.63e-08 5.43e-08 1.83e-08 1.19e-07 3.92e-09 4.81e-08