Genes within 1Mb (chr1:29137125:T:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 -44775 eQTL 1.07e-08 -0.0583 0.0101 0.0179 0.0181 0.46
ENSG00000116353 MECR -93817 pQTL 3.01e-07 -0.055 0.0107 0.00291 0.00327 0.452
ENSG00000159023 EPB41 250034 eQTL 1.11e-02 -0.0464 0.0183 0.0 0.0 0.46
ENSG00000198492 YTHDF2 400504 eQTL 2.61e-02 0.0267 0.012 0.0 0.0 0.46
ENSG00000200087 SNORA73B 628566 eQTL 1.81e-03 0.129 0.0411 0.00221 0.00148 0.46
ENSG00000204138 PHACTR4 767543 eQTL 2.56e-02 -0.0434 0.0194 0.00204 0.0 0.46
ENSG00000233427 AL009181.1 259789 eQTL 1.65e-03 0.114 0.0362 0.0 0.0 0.46
ENSG00000253304 TMEM200B 13222 eQTL 1.33e-16 -0.293 0.0347 0.0 0.0 0.46
ENSG00000274266 SNORA73A 629759 eQTL 4.22e-02 0.0816 0.0401 0.00115 0.0 0.46


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000200087 SNORA73B 628566 3.27e-07 1.59e-07 6.04e-08 2.28e-07 9.82e-08 7.75e-08 2.1e-07 5.62e-08 1.5e-07 7.6e-08 1.61e-07 1.23e-07 2.24e-07 8e-08 5.69e-08 7.74e-08 4.45e-08 1.64e-07 7.29e-08 5.61e-08 1.22e-07 1.42e-07 1.58e-07 3.59e-08 1.85e-07 1.26e-07 1.19e-07 1.1e-07 1.31e-07 1.17e-07 1.09e-07 4.75e-08 4.23e-08 9.81e-08 5.41e-08 2.85e-08 5.1e-08 6.66e-08 6.33e-08 8.3e-08 4.72e-08 1.48e-07 3.08e-08 1.13e-08 5.32e-08 8.31e-09 8.98e-08 2.13e-09 4.69e-08
ENSG00000253304 TMEM200B 13222 2.26e-05 2.65e-05 3.99e-06 1.29e-05 3.53e-06 1.02e-05 3.12e-05 3.4e-06 2.05e-05 1.07e-05 2.74e-05 1.06e-05 3.78e-05 1e-05 5.53e-06 1.15e-05 1.2e-05 1.75e-05 6.32e-06 4.92e-06 9.62e-06 2.26e-05 2.21e-05 6.4e-06 3.29e-05 5.39e-06 8.84e-06 8.98e-06 2.3e-05 1.99e-05 1.39e-05 1.34e-06 1.92e-06 4.95e-06 8.83e-06 4.51e-06 2.15e-06 2.76e-06 3.52e-06 2.69e-06 1.36e-06 2.78e-05 2.64e-06 2.62e-07 1.91e-06 2.74e-06 3.33e-06 1.31e-06 1.15e-06