Genes within 1Mb (chr1:28843983:C:T):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000060656 PTPRU -392533 eQTL 2.21e-03 -0.149 0.0485 0.00171 0.0 0.0785
ENSG00000126698 DNAJC8 610954 eQTL 5.32e-03 -0.0737 0.0264 0.0 0.0 0.0785
ENSG00000130770 ATP5IF1 607874 eQTL 1.08e-02 -0.0784 0.0307 0.0 0.0 0.0785
ENSG00000169403 PTAFR 650047 eQTL 2.90e-02 0.059 0.027 0.00105 0.0 0.0785
ENSG00000180198 RCC1 338040 pQTL 4.90e-02 0.0561 0.0284 0.0 0.0 0.0806
ENSG00000180198 RCC1 338040 eQTL 3.97e-02 -0.0704 0.0342 0.0 0.0 0.0785
ENSG00000197989 SNHG12 260997 eQTL 4.56e-02 -0.0564 0.0282 0.0011 0.0 0.0785
ENSG00000198492 YTHDF2 107362 eQTL 3.29e-06 -0.0979 0.0209 0.0 0.0 0.0785
ENSG00000200087 SNORA73B 335424 eQTL 2.84e-02 -0.159 0.0725 0.0 0.0 0.0785
ENSG00000233427 AL009181.1 -33353 eQTL 3.07e-03 -0.189 0.0637 0.0 0.0 0.0785
ENSG00000253304 TMEM200B -279920 eQTL 1.03e-02 0.162 0.0631 0.0 0.0 0.0785
ENSG00000271398 AL353622.2 596839 eQTL 3.92e-02 -0.101 0.0487 0.0 0.0 0.0785
ENSG00000274266 SNORA73A 336617 eQTL 7.78e-03 -0.188 0.0704 0.00331 0.00115 0.0785


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000117748 \N 929237 2.8e-07 1.34e-07 5.49e-08 1.9e-07 9.8e-08 9.05e-08 1.6e-07 5.43e-08 1.45e-07 6.08e-08 1.57e-07 1.08e-07 1.59e-07 7.37e-08 6.25e-08 7.23e-08 4.24e-08 1.44e-07 6.07e-08 4.78e-08 1.26e-07 1.26e-07 1.44e-07 2.79e-08 1.63e-07 1.26e-07 1.13e-07 9.92e-08 1.23e-07 1e-07 1.06e-07 3.03e-08 3.73e-08 8.89e-08 3.52e-08 3.14e-08 5.45e-08 8.76e-08 6.71e-08 3.82e-08 5.41e-08 1.46e-07 5.27e-08 1.52e-08 3.83e-08 1.92e-08 1.21e-07 1.89e-09 5e-08
ENSG00000126698 DNAJC8 610954 5.37e-07 2.56e-07 8.55e-08 2.53e-07 9.93e-08 1.32e-07 3.42e-07 7.98e-08 2.56e-07 1.5e-07 2.98e-07 2.22e-07 4.27e-07 8.85e-08 1.07e-07 1.39e-07 1.01e-07 2.93e-07 9.71e-08 7.26e-08 1.6e-07 2.3e-07 2.26e-07 6.65e-08 3.7e-07 2.01e-07 1.74e-07 1.69e-07 1.98e-07 2.1e-07 1.78e-07 6.87e-08 4.93e-08 1.21e-07 1.76e-07 5.23e-08 6.67e-08 6.31e-08 4.99e-08 7.89e-08 3.27e-08 2.6e-07 2.62e-08 1.54e-08 7.26e-08 9.12e-09 9.38e-08 2.75e-09 4.74e-08
ENSG00000130770 ATP5IF1 607874 5.59e-07 2.56e-07 8.55e-08 2.53e-07 9.93e-08 1.44e-07 3.42e-07 7.98e-08 2.56e-07 1.5e-07 3.21e-07 2.22e-07 4.27e-07 9.15e-08 1.07e-07 1.46e-07 1.18e-07 2.93e-07 9.71e-08 7.4e-08 1.6e-07 2.3e-07 2.26e-07 7.22e-08 3.98e-07 2.01e-07 1.74e-07 1.69e-07 1.98e-07 2.19e-07 1.78e-07 7.91e-08 4.93e-08 1.24e-07 1.83e-07 5.23e-08 6.77e-08 6.46e-08 4.72e-08 7.55e-08 3.31e-08 2.65e-07 2.62e-08 1.54e-08 7.93e-08 9.12e-09 9.19e-08 2.8e-09 4.82e-08
ENSG00000180198 RCC1 338040 1.32e-06 1.01e-06 3.26e-07 6.94e-07 3.46e-07 4.73e-07 1.24e-06 3.52e-07 1.38e-06 4.19e-07 1.48e-06 6.31e-07 2.02e-06 2.55e-07 5.79e-07 8.12e-07 8.37e-07 6.45e-07 6.96e-07 6.99e-07 6.12e-07 1.3e-06 9.21e-07 6.31e-07 1.95e-06 4.36e-07 7.73e-07 7.27e-07 1.24e-06 1.22e-06 5.88e-07 1.9e-07 2.3e-07 6.8e-07 5.82e-07 4.81e-07 5.17e-07 1.92e-07 3.34e-07 3.21e-07 2.73e-07 1.62e-06 8.26e-08 4.13e-08 1.52e-07 1.28e-07 2.15e-07 6.95e-08 1.12e-07
ENSG00000270605 \N 602530 5.59e-07 2.67e-07 7.97e-08 2.57e-07 1.08e-07 1.5e-07 3.44e-07 8.17e-08 2.6e-07 1.6e-07 3.25e-07 2.28e-07 4.34e-07 9.15e-08 1.12e-07 1.46e-07 1.18e-07 2.96e-07 9.97e-08 7.54e-08 1.65e-07 2.3e-07 2.33e-07 7.36e-08 3.98e-07 2.07e-07 1.74e-07 1.67e-07 2.03e-07 2.26e-07 1.86e-07 8.02e-08 5.41e-08 1.18e-07 1.95e-07 5.41e-08 6.87e-08 6.56e-08 4.78e-08 7.67e-08 2.78e-08 2.71e-07 2.28e-08 1.55e-08 8.06e-08 9.31e-09 9.34e-08 2.85e-09 5.16e-08
ENSG00000271398 AL353622.2 596839 5.74e-07 2.89e-07 8.51e-08 2.61e-07 1.08e-07 1.5e-07 3.57e-07 8.37e-08 2.66e-07 1.6e-07 3.32e-07 2.33e-07 4.54e-07 9.18e-08 1.18e-07 1.49e-07 1.17e-07 3.02e-07 9.97e-08 7.29e-08 1.65e-07 2.45e-07 2.33e-07 7.94e-08 4.11e-07 2.13e-07 1.78e-07 1.67e-07 2.11e-07 2.39e-07 1.86e-07 8.25e-08 5.53e-08 1.21e-07 1.97e-07 5.51e-08 6.95e-08 6.67e-08 5.25e-08 7.28e-08 2.84e-08 2.72e-07 2.32e-08 1.57e-08 7.89e-08 9.49e-09 9.84e-08 2.89e-09 5.16e-08