Genes within 1Mb (chr1:28830590:A:C):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116350 SRSF4 -351310 eQTL 1.91e-03 0.152 0.0489 0.00269 0.00136 0.0108
ENSG00000117748 RPA2 915844 pQTL 3.49e-02 -0.196 0.0926 0.00137 0.0 0.0116
ENSG00000126698 DNAJC8 597561 eQTL 3.14e-04 -0.259 0.0715 0.0 0.0 0.0108
ENSG00000130766 SESN2 571072 eQTL 2.72e-02 -0.127 0.0572 0.0 0.0 0.0108
ENSG00000130770 ATP5IF1 594481 eQTL 5.60e-05 -0.336 0.083 0.0 0.0 0.0108
ENSG00000130775 THEMIS2 958047 eQTL 2.82e-02 -0.0973 0.0443 0.0 0.0 0.0108
ENSG00000162419 GMEB1 161858 eQTL 4.60e-02 0.145 0.0726 0.0014 0.0 0.0108
ENSG00000200087 SNORA73B 322031 eQTL 7.31e-04 0.665 0.196 0.00416 0.00956 0.0108
ENSG00000214812 AL137792.1 709269 eQTL 1.89e-01 -0.201 0.153 0.00108 0.0 0.0108
ENSG00000242125 SNHG3 324610 eQTL 4.41e-02 0.102 0.0504 0.0 0.0 0.0108
ENSG00000271398 AL353622.2 583446 eQTL 3.94e-02 -0.273 0.132 0.0 0.0 0.0108
ENSG00000274266 SNORA73A 323224 eQTL 2.55e-02 0.428 0.192 0.00233 0.0 0.0108


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina