Genes within 1Mb (chr1:28300916:G:A):

View on , UCSC , GTEx , gnomAD


Statistical fine-mapping results from Japan COVID-19 Task Force
(Shown only for PIP>0.001)
Gene ID
Gene Symbol
TSS Distance
Category
P-value
Effect Size
Effect Size (se)
PIP (SuSiE)
PIP (FINEMAP)
MAF
ENSG00000116353 MECR -930026 pQTL 1.48e-02 0.0268 0.011 0.0 0.0 0.411
ENSG00000126698 DNAJC8 67887 eQTL 1.29e-03 0.0489 0.0152 0.0 0.0 0.418
ENSG00000130766 SESN2 41398 eQTL 7.30e-04 0.0409 0.0121 0.0 0.0 0.418
ENSG00000130770 ATP5IF1 64807 pQTL 3.81e-02 -0.0265 0.0128 0.0 0.0 0.411
ENSG00000130770 ATP5IF1 64807 eQTL 2.31e-02 0.0402 0.0177 0.0 0.0 0.418
ENSG00000142733 MAP3K6 933955 eQTL 5.37e-02 0.0429 0.0222 0.00107 0.0 0.418
ENSG00000142765 SYTL1 958896 eQTL 1.75e-01 0.0214 0.0158 0.00103 0.0 0.418
ENSG00000158156 XKR8 341454 eQTL 2.93e-03 0.0672 0.0225 0.0 0.0 0.418
ENSG00000158161 EYA3 212279 eQTL 2.72e-02 0.0426 0.0193 0.0 0.0 0.418
ENSG00000159023 EPB41 -586175 eQTL 4.24e-02 0.0376 0.0185 0.0 0.0 0.418
ENSG00000169403 PTAFR 106980 eQTL 2.98e-02 -0.0338 0.0155 0.0 0.0 0.418
ENSG00000180198 RCC1 -205027 eQTL 4.37e-01 -0.0153 0.0197 0.00316 0.0 0.418
ENSG00000204138 PHACTR4 -68666 eQTL 4.24e-03 0.0563 0.0196 0.00177 0.0 0.418


Expression Modifier Score(EMS) for GTEx 49tissues
Gene ID
Gene Symbol
TSS Distance
Whole Blood
Muscle Skeletal
Liver
Brain Cerebellum
Prostate
Spleen
Skin Sun Exposed Lower leg
Artery Coronary
Esophagus Muscularis
Esophagus Gastroesophageal Junction
Artery Tibial
Heart Atrial Appendage
Nerve Tibial
Heart Left Ventricle
Adrenal Gland
Adipose Visceral Omentum
Pancreas
Lung
Pituitary
Brain Nucleus accumbens basal ganglia
Colon Transverse
Adipose Subcutaneous
Esophagus Mucosa
Brain Cortex
Thyroid
Stomach
Breast Mammary Tissue
Colon Sigmoid
Skin Not Sun Exposed Suprapubic
Testis
Artery Aorta
Brain Amygdala
Brain Anterior cingulate cortex BA24
Brain Caudate basal ganglia
Brain Cerebellar Hemisphere
Brain Frontal Cortex BA9
Brain Hippocampus
Brain Hypothalamus
Brain Putamen basal ganglia
Brain Spinal cord cervical c-1
Brain Substantia nigra
Cells Cultured fibroblasts
Cells EBV-transformed lymphocytes
Kidney Cortex
Minor Salivary Gland
Ovary
Small Intestine Terminal Ileum
Uterus
Vagina
ENSG00000130766 SESN2 41398 1.12e-05 1.21e-05 1.98e-06 6.84e-06 2.35e-06 5.45e-06 1.38e-05 2.08e-06 1.05e-05 5.52e-06 1.45e-05 6.14e-06 1.85e-05 4.11e-06 3.71e-06 6.87e-06 6.37e-06 9.58e-06 3.29e-06 3.09e-06 6.86e-06 1.08e-05 1.03e-05 3.69e-06 1.9e-05 4.39e-06 6.33e-06 4.8e-06 1.33e-05 1.15e-05 7e-06 9.97e-07 1.25e-06 3.7e-06 5.21e-06 2.76e-06 1.8e-06 2e-06 2.14e-06 1.34e-06 1.12e-06 1.48e-05 1.59e-06 2.5e-07 9.12e-07 1.96e-06 1.98e-06 6.85e-07 4.43e-07
ENSG00000130768 \N 365916 1.2e-06 8.81e-07 1.96e-07 3.55e-07 1.79e-07 3.69e-07 8.39e-07 2.84e-07 8.61e-07 3.11e-07 1.24e-06 5.95e-07 1.37e-06 2.19e-07 4.34e-07 4.47e-07 7.22e-07 5.31e-07 3.84e-07 4.19e-07 2.86e-07 6.48e-07 5.87e-07 3.93e-07 1.72e-06 2.37e-07 6.03e-07 4.98e-07 7.45e-07 9.11e-07 4.54e-07 3.77e-08 1.35e-07 3.17e-07 3.81e-07 2.54e-07 2.57e-07 1.59e-07 1.61e-07 4.17e-08 2.84e-07 1.06e-06 6.68e-08 1.95e-08 1.7e-07 7.22e-08 1.9e-07 8.97e-08 5.02e-08
ENSG00000142733 MAP3K6 933955 2.74e-07 1.3e-07 4.69e-08 1.83e-07 1.01e-07 9.91e-08 1.61e-07 5.48e-08 1.45e-07 5.42e-08 1.52e-07 9.19e-08 1.52e-07 7.13e-08 6.12e-08 7.36e-08 4.17e-08 1.33e-07 5.97e-08 4.3e-08 1.21e-07 1.27e-07 1.44e-07 3.03e-08 1.55e-07 1.14e-07 1.1e-07 9.74e-08 1.16e-07 1.07e-07 9.92e-08 2.96e-08 3.96e-08 8.11e-08 3.63e-08 3.49e-08 5.37e-08 8.61e-08 6.63e-08 3.82e-08 5.54e-08 1.36e-07 5.21e-08 1.23e-08 3.41e-08 1.89e-08 1.21e-07 1.89e-09 5.02e-08
ENSG00000158156 XKR8 341454 1.26e-06 9.35e-07 2.7e-07 5.24e-07 2.43e-07 4.39e-07 1.08e-06 3.27e-07 1.14e-06 3.89e-07 1.35e-06 5.71e-07 1.57e-06 2.61e-07 4.28e-07 5.75e-07 7.73e-07 5.65e-07 4.49e-07 5.57e-07 3.6e-07 9.14e-07 7.08e-07 5.01e-07 1.92e-06 2.7e-07 6.53e-07 5.67e-07 9.15e-07 1.01e-06 5.42e-07 5.06e-08 1.81e-07 4.51e-07 4.4e-07 2.99e-07 3.62e-07 1.4e-07 1.5e-07 9.13e-08 3.01e-07 1.26e-06 6.58e-08 3.38e-08 1.84e-07 8.9e-08 2.01e-07 8.37e-08 8.28e-08
ENSG00000158161 EYA3 212279 1.92e-06 2.4e-06 2.74e-07 1.51e-06 4.39e-07 7.89e-07 1.31e-06 4.95e-07 1.75e-06 7.32e-07 1.96e-06 1.45e-06 2.94e-06 8.7e-07 4.63e-07 1.07e-06 1.09e-06 1.35e-06 5.75e-07 7.55e-07 6.75e-07 1.96e-06 1.68e-06 1.01e-06 2.62e-06 1e-06 1.13e-06 1.15e-06 1.68e-06 1.66e-06 8.55e-07 3.03e-07 3.95e-07 8.88e-07 9.26e-07 6.2e-07 6.89e-07 3.84e-07 6.42e-07 2.05e-07 3.05e-07 2.77e-06 4.24e-07 2.07e-07 3.62e-07 2.82e-07 4.17e-07 2.49e-07 2.98e-07
ENSG00000158195 \N 810749 2.77e-07 1.36e-07 5.35e-08 2.05e-07 9.82e-08 8.21e-08 1.81e-07 5.85e-08 1.5e-07 6.75e-08 1.59e-07 1.15e-07 1.71e-07 7.64e-08 5.82e-08 7.74e-08 4.24e-08 1.51e-07 6.92e-08 5.07e-08 1.25e-07 1.25e-07 1.5e-07 2.83e-08 1.72e-07 1.22e-07 1.17e-07 1.06e-07 1.24e-07 1e-07 1.07e-07 3.66e-08 3.68e-08 8.89e-08 3.51e-08 2.99e-08 5.65e-08 8.37e-08 6.67e-08 5.24e-08 6.21e-08 1.46e-07 5.27e-08 1.1e-08 3.55e-08 1.71e-08 9.29e-08 2e-09 4.8e-08
ENSG00000228589 \N 204494 2.08e-06 2.46e-06 2.99e-07 1.62e-06 4.41e-07 8.03e-07 1.33e-06 5.89e-07 1.72e-06 7.18e-07 2.02e-06 1.45e-06 3.25e-06 9.92e-07 5.75e-07 1.17e-06 9.73e-07 1.42e-06 5.95e-07 8.75e-07 7.87e-07 2.02e-06 1.79e-06 9.76e-07 2.84e-06 1.07e-06 1.19e-06 1.35e-06 1.76e-06 1.65e-06 1.07e-06 2.77e-07 4.73e-07 1.12e-06 1.01e-06 6.4e-07 7.5e-07 3.94e-07 7.38e-07 3.47e-07 1.83e-07 2.83e-06 4.23e-07 1.99e-07 3.98e-07 3.62e-07 5.13e-07 2.42e-07 2.46e-07